View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6588_low_4 (Length: 408)
Name: NF6588_low_4
Description: NF6588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6588_low_4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 10 - 408
Target Start/End: Complemental strand, 2462330 - 2461932
Alignment:
| Q |
10 |
acatcatcacaaccacatttcagctttgctagtattgcaccgcgcaatataaagattcatagctttatctaaaccgaaaatgcagattaaaacctaaacc |
109 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2462330 |
acatcatcacaaccacatttcagctttgctagtattgcaccgcgcaatataaagattcatagctttatctaaaccgaaaatgcagattaaaacctaaacc |
2462231 |
T |
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| Q |
110 |
agtttagaaaacttgagcatgatcaccaccacaacctaatactttttcaggacaacttgcttcatcaagaagccatttctcaagcaaagaaaagggcatt |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2462230 |
agtttagaaaacttgagcatgatcaccaccacaacctaatactttttcaggacaacttgcttcatcaagaagccatttctcaagcaaagaaaagggcatt |
2462131 |
T |
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| Q |
210 |
gtttccgaaccaacatcaggcttactttcatcttgtaaaatcgttgcgtctggtgacaaagactgatgagaaaattcagaattcgatgactccaaagact |
309 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2462130 |
gtttctgaaccaacatcaggcttactttcatcttgtaaaatcgttgcgtctggtgacaaagactgatgagaaaattcagaattcgatgactccaaagact |
2462031 |
T |
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| Q |
310 |
ctaaaggctcaaaaccaaacaaagattcaaatgtttcagacaatatttcaccctttgttccactactagaagcagaatcaaagttgttgaaggaatttt |
408 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2462030 |
ctaaaggctcaaaaccaaacaaagattcaaatgtttcagacaatatttcaccctttgttccactactagaagcagaatcaaagttgttgaaggaatttt |
2461932 |
T |
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