View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6594_high_105 (Length: 212)
Name: NF6594_high_105
Description: NF6594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6594_high_105 |
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Alignment Details
Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 7626888 - 7627054
Alignment:
| Q |
24 |
atatacatggttcctttttgtacacctcttttcaaataagataggccttccaagttccaagacacatgccctacatttgcatatttatcaagctgtggct |
123 |
Q |
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| T |
7626888 |
atatacatggttcctttttgtacacctcttttcaaataagataggccttccaagttccaagacacatgccctacatttgcatatttatcaagttgtggct |
7626987 |
T |
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| Q |
124 |
tagacacaaatgttaccatattaatggttgatattgcatttggtatatgcaaccagatcgaccataa |
190 |
Q |
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| T |
7626988 |
tagacacaaatgttaccatgttaatggttgatattgcatttgggatatgcaacaaggtcgaccataa |
7627054 |
T |
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