View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6594_high_26 (Length: 428)

Name: NF6594_high_26
Description: NF6594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6594_high_26
NF6594_high_26
[»] chr7 (40 HSPs)
chr7 (243-409)||(45152811-45152977)
chr7 (72-175)||(45149713-45149816)
chr7 (68-175)||(8267743-8267849)
chr7 (68-175)||(46474127-46474234)
chr7 (68-175)||(28390438-28390544)
chr7 (68-175)||(9723822-9723928)
chr7 (171-245)||(45152427-45152501)
chr7 (68-177)||(15358923-15359031)
chr7 (68-175)||(13448842-13448948)
chr7 (71-177)||(20583567-20583672)
chr7 (71-175)||(28722239-28722342)
chr7 (71-175)||(38424348-38424451)
chr7 (71-175)||(14935489-14935592)
chr7 (71-175)||(15363082-15363185)
chr7 (71-174)||(4484856-4484958)
chr7 (92-175)||(9319578-9319661)
chr7 (95-177)||(9611460-9611542)
chr7 (95-177)||(9839031-9839113)
chr7 (68-174)||(33559773-33559878)
chr7 (95-177)||(48356796-48356878)
chr7 (71-175)||(4446341-4446444)
chr7 (71-175)||(8563362-8563466)
chr7 (68-175)||(17947607-17947713)
chr7 (78-177)||(31501309-31501407)
chr7 (95-177)||(16914941-16915023)
chr7 (71-175)||(4438912-4439015)
chr7 (95-177)||(34241220-34241302)
chr7 (92-177)||(14271912-14271997)
chr7 (71-177)||(14940884-14940986)
chr7 (71-177)||(15368477-15368579)
chr7 (107-177)||(13377693-13377763)
chr7 (107-177)||(49047687-49047757)
chr7 (109-169)||(39291538-39291598)
chr7 (107-169)||(15977870-15977932)
chr7 (107-177)||(17223951-17224021)
chr7 (134-175)||(9250630-9250671)
chr7 (129-162)||(17947546-17947579)
chr7 (107-177)||(13274941-13275011)
chr7 (107-169)||(44305034-44305096)
chr7 (107-172)||(13037048-13037112)
[»] chr3 (41 HSPs)
chr3 (68-175)||(10913011-10913118)
chr3 (72-175)||(38375711-38375814)
chr3 (72-177)||(15517760-15517865)
chr3 (88-175)||(8604970-8605057)
chr3 (72-175)||(31412348-31412450)
chr3 (71-177)||(14814778-14814883)
chr3 (68-177)||(6228638-6228746)
chr3 (68-175)||(50313313-50313419)
chr3 (68-160)||(43427546-43427637)
chr3 (68-174)||(41661691-41661796)
chr3 (68-177)||(4145827-4145934)
chr3 (88-177)||(13301482-13301571)
chr3 (88-177)||(13312138-13312227)
chr3 (68-177)||(4162218-4162326)
chr3 (88-177)||(11882231-11882320)
chr3 (96-177)||(34560052-34560133)
chr3 (72-169)||(33368948-33369044)
chr3 (72-175)||(11515505-11515609)
chr3 (71-169)||(11402718-11402816)
chr3 (71-169)||(12539090-12539188)
chr3 (107-177)||(12953128-12953198)
chr3 (72-140)||(11638487-11638554)
chr3 (95-174)||(9590770-9590849)
chr3 (107-177)||(3576451-3576521)
chr3 (107-177)||(17191705-17191775)
chr3 (107-177)||(17204845-17204915)
chr3 (107-177)||(47784779-47784849)
chr3 (91-177)||(17139656-17139742)
chr3 (107-177)||(39656690-39656760)
chr3 (71-169)||(15550726-15550824)
chr3 (107-177)||(30207380-30207450)
chr3 (107-169)||(48421741-48421803)
chr3 (107-154)||(12488762-12488809)
chr3 (107-174)||(14080673-14080740)
chr3 (71-153)||(1990931-1991012)
chr3 (92-177)||(14059226-14059311)
chr3 (107-143)||(14177065-14177101)
chr3 (107-177)||(16880287-16880357)
chr3 (71-169)||(18970049-18970147)
chr3 (140-174)||(21167097-21167131)
chr3 (116-177)||(15876241-15876302)
[»] scaffold0022 (4 HSPs)
scaffold0022 (68-175)||(67972-68079)
scaffold0022 (68-175)||(131941-132047)
scaffold0022 (109-174)||(109756-109821)
scaffold0022 (107-177)||(102935-103005)
[»] chr6 (36 HSPs)
chr6 (68-175)||(23222877-23222983)
chr6 (68-175)||(22462112-22462218)
chr6 (68-175)||(23222042-23222148)
chr6 (71-176)||(19672415-19672519)
chr6 (75-176)||(31467611-31467712)
chr6 (68-175)||(19854281-19854387)
chr6 (72-175)||(17013654-17013756)
chr6 (68-175)||(34966993-34967099)
chr6 (70-177)||(18629621-18629727)
chr6 (72-175)||(19175280-19175383)
chr6 (72-171)||(21931333-21931432)
chr6 (71-177)||(22848144-22848249)
chr6 (95-177)||(17557031-17557112)
chr6 (68-177)||(17083211-17083318)
chr6 (72-175)||(16136392-16136495)
chr6 (68-174)||(32352173-32352278)
chr6 (95-167)||(25651389-25651461)
chr6 (107-177)||(22361778-22361848)
chr6 (71-177)||(29605579-29605683)
chr6 (68-150)||(29160343-29160424)
chr6 (68-174)||(33538386-33538490)
chr6 (107-177)||(18381696-18381766)
chr6 (107-177)||(21623332-21623402)
chr6 (107-169)||(22585575-22585637)
chr6 (107-169)||(22590406-22590468)
chr6 (91-177)||(28195106-28195192)
chr6 (93-177)||(18399088-18399172)
chr6 (107-171)||(33324857-33324920)
chr6 (107-171)||(35136032-35136095)
chr6 (107-174)||(16887808-16887875)
chr6 (107-169)||(15889735-15889797)
chr6 (107-168)||(25640585-25640646)
chr6 (71-168)||(26512270-26512367)
chr6 (71-168)||(26517386-26517483)
chr6 (71-168)||(26089863-26089960)
chr6 (146-175)||(29158399-29158428)
[»] chr8 (40 HSPs)
chr8 (68-175)||(22497224-22497330)
chr8 (68-175)||(24552585-24552691)
chr8 (68-175)||(18261486-18261592)
chr8 (68-175)||(33172354-33172460)
chr8 (68-175)||(45558952-45559058)
chr8 (68-176)||(22742890-22742997)
chr8 (69-175)||(45465141-45465246)
chr8 (68-175)||(16002123-16002230)
chr8 (75-175)||(18041547-18041646)
chr8 (95-177)||(15933450-15933532)
chr8 (77-175)||(38635663-38635760)
chr8 (68-177)||(37653629-37653737)
chr8 (95-177)||(26011646-26011728)
chr8 (72-175)||(22887893-22887993)
chr8 (68-177)||(33528551-33528659)
chr8 (107-177)||(5854778-5854848)
chr8 (71-167)||(19331340-19331432)
chr8 (72-168)||(18118311-18118407)
chr8 (118-177)||(27233103-27233162)
chr8 (95-177)||(23149930-23150013)
chr8 (107-174)||(25296322-25296389)
chr8 (107-174)||(25758342-25758409)
chr8 (107-177)||(17285368-17285438)
chr8 (107-177)||(21198165-21198235)
chr8 (107-177)||(23151846-23151916)
chr8 (95-177)||(23158312-23158395)
chr8 (71-169)||(21259520-21259618)
chr8 (107-177)||(23837362-23837432)
chr8 (92-174)||(29306566-29306648)
chr8 (110-174)||(23226092-23226156)
chr8 (95-174)||(33611069-33611148)
chr8 (107-177)||(22981437-22981507)
chr8 (91-177)||(38533797-38533883)
chr8 (92-151)||(15969970-15970029)
chr8 (107-169)||(17502325-17502387)
chr8 (107-169)||(20175795-20175857)
chr8 (107-169)||(20220522-20220584)
chr8 (109-169)||(4234021-4234081)
chr8 (71-143)||(16038936-16039008)
chr8 (109-169)||(23218043-23218103)
[»] chr5 (29 HSPs)
chr5 (68-175)||(23417367-23417474)
chr5 (68-175)||(16835314-16835420)
chr5 (68-172)||(21109876-21109979)
chr5 (71-177)||(22885771-22885876)
chr5 (68-174)||(26559831-26559936)
chr5 (68-175)||(23234500-23234606)
chr5 (68-177)||(24084203-24084311)
chr5 (68-177)||(29918091-29918199)
chr5 (115-175)||(19873933-19873993)
chr5 (92-174)||(21310725-21310807)
chr5 (68-171)||(11763523-11763626)
chr5 (107-177)||(21222621-21222691)
chr5 (92-174)||(21297191-21297273)
chr5 (68-174)||(37983490-37983595)
chr5 (107-177)||(23981529-23981599)
chr5 (108-177)||(21617181-21617250)
chr5 (71-177)||(6456753-6456855)
chr5 (107-177)||(19862373-19862443)
chr5 (107-177)||(5450856-5450926)
chr5 (92-177)||(432612-432697)
chr5 (125-179)||(3674044-3674098)
chr5 (68-123)||(24225383-24225438)
chr5 (107-153)||(7728584-7728630)
chr5 (107-143)||(22662730-22662766)
chr5 (93-177)||(32966162-32966246)
chr5 (118-177)||(28902366-28902425)
chr5 (118-177)||(28938761-28938820)
chr5 (140-174)||(5621810-5621844)
chr5 (127-177)||(16595691-16595741)
[»] chr1 (23 HSPs)
chr1 (68-175)||(20194150-20194258)
chr1 (68-175)||(33397478-33397584)
chr1 (68-175)||(40436284-40436390)
chr1 (68-175)||(5768184-5768290)
chr1 (68-175)||(25093985-25094091)
chr1 (72-177)||(52400761-52400865)
chr1 (72-176)||(8537924-8538027)
chr1 (72-176)||(8603163-8603266)
chr1 (68-175)||(49997296-49997402)
chr1 (71-177)||(21195143-21195248)
chr1 (107-175)||(37233875-37233943)
chr1 (107-177)||(17609092-17609162)
chr1 (92-177)||(19603246-19603331)
chr1 (107-174)||(22143377-22143444)
chr1 (107-177)||(13376872-13376942)
chr1 (107-177)||(20177339-20177409)
chr1 (115-177)||(20955452-20955514)
chr1 (91-177)||(51627677-51627763)
chr1 (68-104)||(76458-76494)
chr1 (92-176)||(38033688-38033772)
chr1 (118-177)||(16656813-16656872)
chr1 (115-177)||(22829438-22829500)
chr1 (115-177)||(27674968-27675030)
[»] scaffold0561 (1 HSPs)
scaffold0561 (68-175)||(2787-2893)
[»] scaffold0148 (1 HSPs)
scaffold0148 (68-175)||(37684-37790)
[»] chr2 (23 HSPs)
chr2 (68-175)||(18536881-18536988)
chr2 (68-175)||(25595146-25595252)
chr2 (68-175)||(9636871-9636977)
chr2 (72-177)||(24087400-24087505)
chr2 (72-175)||(16292816-16292918)
chr2 (68-175)||(24277887-24277993)
chr2 (72-168)||(20279540-20279636)
chr2 (87-177)||(19660024-19660114)
chr2 (68-174)||(24884812-24884917)
chr2 (107-170)||(19666692-19666755)
chr2 (107-177)||(68156-68226)
chr2 (172-245)||(38256247-38256320)
chr2 (108-174)||(19669125-19669191)
chr2 (92-177)||(722540-722625)
chr2 (109-177)||(43646059-43646127)
chr2 (68-123)||(6094842-6094896)
chr2 (107-177)||(22775218-22775288)
chr2 (107-177)||(22780596-22780666)
chr2 (125-177)||(31146194-31146246)
chr2 (122-177)||(23821652-23821707)
chr2 (122-177)||(23830731-23830786)
chr2 (88-143)||(28031293-28031348)
chr2 (145-175)||(6094888-6094918)
[»] scaffold0153 (1 HSPs)
scaffold0153 (68-172)||(8616-8719)
[»] scaffold0670 (1 HSPs)
scaffold0670 (68-175)||(7690-7796)
[»] scaffold0601 (1 HSPs)
scaffold0601 (81-175)||(895-989)
[»] scaffold0165 (2 HSPs)
scaffold0165 (68-174)||(22125-22230)
scaffold0165 (68-174)||(30090-30195)
[»] scaffold0387 (1 HSPs)
scaffold0387 (68-177)||(975-1083)
[»] scaffold0598 (1 HSPs)
scaffold0598 (68-175)||(3377-3483)
[»] scaffold0406 (1 HSPs)
scaffold0406 (68-175)||(14162-14268)
[»] scaffold0065 (1 HSPs)
scaffold0065 (72-175)||(67912-68014)
[»] scaffold0020 (1 HSPs)
scaffold0020 (68-175)||(108135-108241)
[»] chr4 (24 HSPs)
chr4 (68-175)||(13590089-13590195)
chr4 (68-175)||(18238172-18238278)
chr4 (68-175)||(54398509-54398615)
chr4 (68-175)||(13442691-13442797)
chr4 (68-175)||(47468363-47468469)
chr4 (68-171)||(50219959-50220061)
chr4 (92-175)||(40904949-40905032)
chr4 (107-177)||(7964725-7964795)
chr4 (68-175)||(41916741-41916847)
chr4 (71-177)||(38764838-38764943)
chr4 (71-177)||(41256383-41256487)
chr4 (92-177)||(7185857-7185942)
chr4 (71-177)||(15013296-15013400)
chr4 (107-174)||(18276598-18276665)
chr4 (107-177)||(47535078-47535148)
chr4 (71-168)||(21417435-21417532)
chr4 (91-177)||(13809523-13809609)
chr4 (107-177)||(15044992-15045062)
chr4 (107-177)||(15109362-15109432)
chr4 (71-169)||(19559487-19559585)
chr4 (107-177)||(41165959-41166029)
chr4 (125-177)||(52265521-52265573)
chr4 (107-169)||(49071851-49071913)
chr4 (107-143)||(34177695-34177731)
[»] scaffold0193 (1 HSPs)
scaffold0193 (68-177)||(4731-4839)
[»] scaffold0133 (1 HSPs)
scaffold0133 (72-175)||(25476-25578)
[»] scaffold0004 (2 HSPs)
scaffold0004 (68-175)||(27623-27729)
scaffold0004 (68-175)||(86483-86589)
[»] scaffold0049 (1 HSPs)
scaffold0049 (68-175)||(33428-33535)
[»] scaffold0025 (2 HSPs)
scaffold0025 (71-177)||(85662-85766)
scaffold0025 (96-173)||(53499-53576)
[»] scaffold0253 (2 HSPs)
scaffold0253 (72-177)||(7532-7636)
scaffold0253 (72-177)||(16957-17061)
[»] scaffold0231 (1 HSPs)
scaffold0231 (68-169)||(12754-12855)
[»] scaffold0080 (2 HSPs)
scaffold0080 (68-177)||(23685-23793)
scaffold0080 (107-177)||(43811-43881)
[»] scaffold0700 (1 HSPs)
scaffold0700 (107-177)||(2689-2759)
[»] scaffold0031 (1 HSPs)
scaffold0031 (95-177)||(97211-97293)
[»] scaffold0010 (1 HSPs)
scaffold0010 (95-177)||(31172-31254)
[»] scaffold0077 (1 HSPs)
scaffold0077 (92-177)||(6693-6778)
[»] scaffold0057 (1 HSPs)
scaffold0057 (71-169)||(6011-6109)
[»] scaffold0053 (1 HSPs)
scaffold0053 (107-177)||(76860-76930)
[»] scaffold0006 (1 HSPs)
scaffold0006 (95-177)||(197266-197348)
[»] scaffold0483 (1 HSPs)
scaffold0483 (107-177)||(6825-6895)
[»] scaffold0409 (2 HSPs)
scaffold0409 (92-174)||(1364-1446)
scaffold0409 (92-174)||(9619-9701)
[»] scaffold0081 (1 HSPs)
scaffold0081 (107-177)||(1349-1418)
[»] scaffold0009 (1 HSPs)
scaffold0009 (95-177)||(69609-69691)
[»] scaffold0634 (1 HSPs)
scaffold0634 (126-177)||(5595-5646)
[»] scaffold0151 (1 HSPs)
scaffold0151 (99-174)||(22438-22513)
[»] scaffold0123 (1 HSPs)
scaffold0123 (107-174)||(8174-8241)
[»] scaffold0521 (1 HSPs)
scaffold0521 (107-177)||(11258-11328)
[»] scaffold0243 (1 HSPs)
scaffold0243 (107-177)||(2329-2399)
[»] scaffold0130 (1 HSPs)
scaffold0130 (129-177)||(27003-27051)
[»] scaffold1295 (1 HSPs)
scaffold1295 (107-169)||(270-332)
[»] scaffold0507 (1 HSPs)
scaffold0507 (107-169)||(1530-1592)
[»] scaffold0162 (1 HSPs)
scaffold0162 (107-177)||(7038-7108)
[»] scaffold0150 (1 HSPs)
scaffold0150 (107-177)||(28700-28770)
[»] scaffold0028 (1 HSPs)
scaffold0028 (108-174)||(79704-79770)
[»] scaffold0456 (2 HSPs)
scaffold0456 (109-174)||(1562-1627)
scaffold0456 (109-174)||(8707-8772)
[»] scaffold0017 (1 HSPs)
scaffold0017 (68-153)||(12891-12976)
[»] scaffold0138 (1 HSPs)
scaffold0138 (107-167)||(22452-22512)
[»] scaffold0032 (1 HSPs)
scaffold0032 (107-174)||(104639-104706)
[»] scaffold0063 (1 HSPs)
scaffold0063 (107-169)||(44143-44205)
[»] scaffold0013 (2 HSPs)
scaffold0013 (107-173)||(35642-35708)
scaffold0013 (107-143)||(7125-7161)
[»] scaffold0389 (1 HSPs)
scaffold0389 (107-174)||(10826-10893)
[»] scaffold0118 (1 HSPs)
scaffold0118 (88-143)||(34467-34522)
[»] scaffold0058 (1 HSPs)
scaffold0058 (107-174)||(70323-70389)
[»] scaffold0026 (1 HSPs)
scaffold0026 (107-174)||(89880-89946)
[»] scaffold0079 (1 HSPs)
scaffold0079 (77-167)||(3872-3962)
[»] scaffold0047 (1 HSPs)
scaffold0047 (109-166)||(19959-20016)
[»] scaffold0317 (1 HSPs)
scaffold0317 (107-143)||(12650-12686)
[»] scaffold0016 (1 HSPs)
scaffold0016 (129-177)||(116571-116619)


Alignment Details
Target: chr7 (Bit Score: 163; Significance: 6e-87; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 243 - 409
Target Start/End: Original strand, 45152811 - 45152977
Alignment:
Q  243 tggaattataatgtacccaaaataataatttgaagaaaacatatttttaaatgatgaaataaatgttataatatttcagcttaacttttaaatgacgatt 342  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45152811 tggaattataatgtacccaaaataataatttgaagaaaacatatttttaaatgatgaaataaatgttataatatttcagcttaacttttaaatgacgatt 45152910  T
Q  343 cttgtagttcatgtcttgttcttaacggtataacgctataagcgaaggtctgatcattggtgttgaa 409  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45152911 cttgtagtccatgtcttgttcttaacggtataacgctataagcgaaggtctgatcattggtgttgaa 45152977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 45149713 - 45149816
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  45149713 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatt 45149812  T
Q  172 ataa 175  Q
    ||||    
T  45149813 ataa 45149816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 8267849 - 8267743
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8267849 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 8267751  T
Q  168 catcataa 175  Q
    ||||||||    
T  8267750 catcataa 8267743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 46474127 - 46474234
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||||| ||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  46474127 ttagagcacaattaacaatatacacatttccacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactctaacatat 46474226  T
Q  168 catcataa 175  Q
    ||||||||    
T  46474227 catcataa 46474234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 28390438 - 28390544
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||     
T  28390438 ttagagcacaattcacaatatacc-attttcacatactatgaacatgcaatttcaccaacaacaatttaattatcaccaatttcatgtactcaaacataa 28390536  T
Q  168 catcataa 175  Q
    ||||||||    
T  28390537 catcataa 28390544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 9723928 - 9723822
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  9723928 ttagagcacaattcacaatatatc-attttcacatattatgaacatgcagtttcatcaacatcaattgaattatcaccaatttcatgtacccaaacatat 9723830  T
Q  168 catcataa 175  Q
    ||||||||    
T  9723829 catcataa 9723822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 45152427 - 45152501
Alignment:
Q  171 cataatttgcacggctagtgtggctggctttgttgctggatgtgcaggacatgattatacaacatccaaacatgg 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45152427 cataatttgcacggctagtgtggctggctttgttgctggatgtgcaggacatgattatacaacatccaaacatgg 45152501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 15358923 - 15359031
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  15358923 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 15359021  T
Q  168 catcataatt 177  Q
    || |||||||    
T  15359022 caccataatt 15359031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 13448948 - 13448842
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||     
T  13448948 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaataattcaattatcaccaatttcatgtactcaaacataa 13448850  T
Q  168 catcataa 175  Q
    ||| ||||    
T  13448849 catgataa 13448842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 71 - 177
Target Start/End: Complemental strand, 20583672 - 20583567
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||| | ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |    
T  20583672 gagcataattcacaatatatc-attttcacatactatgaacatgcaatttcatcaacaataattcaattatcaccaatttcatgtattcaaacatatctt 20583574  T
Q  171 cataatt 177  Q
    |||||||    
T  20583573 cataatt 20583567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 28722239 - 28722342
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||    
T  28722239 gagcataattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcat 28722337  T
Q  171 cataa 175  Q
    |||||    
T  28722338 cataa 28722342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 38424348 - 38424451
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  38424348 gagcataattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaattttatgtattcaaacatatcat 38424446  T
Q  171 cataa 175  Q
    |||||    
T  38424447 cataa 38424451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 14935489 - 14935592
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||     
T  14935489 gagcataattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcac 14935587  T
Q  171 cataa 175  Q
    |||||    
T  14935588 cataa 14935592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 15363082 - 15363185
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||     
T  15363082 gagcataattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcac 15363180  T
Q  171 cataa 175  Q
    |||||    
T  15363181 cataa 15363185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 4484856 - 4484958
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||| | |||||||||||   |||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||    
T  4484856 gagcataattcacaatatatc-attttcacatacaatgaacatgcaatttctccaacaacaattcaattatcaccaatttcatgtattcaaacatatcat 4484954  T
Q  171 cata 174  Q
    ||||    
T  4484955 cata 4484958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 9319661 - 9319578
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataa 175  Q
    |||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  9319661 cattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcttgtattcaaacatatcatcataa 9319578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 9611460 - 9611542
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  9611460 tttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataatt 9611542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 9839031 - 9839113
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  9839031 tttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataatt 9839113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 33559773 - 33559878
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||| |||||||||||||| | |||||| |||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| |  |||||||    
T  33559773 ttagagcccaattcacaatatatc-attttctcatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattttaacatat 33559871  T
Q  168 catcata 174  Q
    |||||||    
T  33559872 catcata 33559878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 48356796 - 48356878
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  48356796 tttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataatt 48356878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 4446341 - 4446444
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||||||| || |||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||||    
T  4446341 gagcacaatacataatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtgtgcaaacatatcat 4446439  T
Q  171 cataa 175  Q
    |||||    
T  4446440 cataa 4446444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 8563466 - 8563362
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| || ||||||||||| |||||  | ||||  ||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  8563466 gagcataactcacaatatactcatttatatatatcatgaacatgcaatttcatcaacaacaattcaattatcatcaaattcatatactcaaacatatcat 8563367  T
Q  171 cataa 175  Q
    |||||    
T  8563366 cataa 8563362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 17947713 - 17947607
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||||| |||||||| | ||||||||||| | || |||| || ||| | ||||||||||||||||||||||||||||||| ||||||||||||    
T  17947713 ttagagcacaatttacaatatatc-attttcacatactatgcacattcagtttaaccaacaacaattcaattatcaccaatttcatgcactcaaacatat 17947615  T
Q  168 catcataa 175  Q
    ||||||||    
T  17947614 catcataa 17947607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 31501309 - 31501407
Alignment:
Q  78 attcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||| | ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  31501309 attcacaatatatc-attttcacatactatgaacatgcaatttcaccaataacaattcaattatcaccaatttcatgtatttaaacatatcttcataatt 31501407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 16915023 - 16914941
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  16915023 tttcacatactttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataatt 16914941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 4438912 - 4439015
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||||||||||||||||| | ||||| ||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||   ||||||||| ||    
T  4438912 gagcacaattcacaatatatc-attttaacatactatgaacatgcaatttcaccaataacaattcaattatcaccaatttcatgtgtgcaaacatattat 4439010  T
Q  171 cataa 175  Q
    |||||    
T  4439011 cataa 4439015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 34241302 - 34241220
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| | | |||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  34241302 tttcacatacttttaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacataacatcataatt 34241220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 14271997 - 14271912
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||| | |||||||||||||||| ||||||||||| |||||||| |||||||||| | |||||||||||| |||||||    
T  14271997 cattttcacatactttgaacatgcaatttcaccaacaacaattgaattatcaacaatttcatgcattcaaacatatcaccataatt 14271912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 14940884 - 14940986
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||| | ||||||||||| | |||||||||||||||| ||||||   || ||||||||| ||||||||| | ||||||||||||     
T  14940884 gagcataattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaa---tttaattatcacaaatttcatgcattcaaacatatcac 14940979  T
Q  171 cataatt 177  Q
    |||||||    
T  14940980 cataatt 14940986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 15368477 - 15368579
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||| | ||||||||||| | |||||||||||||||| ||||||   || ||||||||| ||||||||| | ||||||||||||     
T  15368477 gagcataattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaa---tttaattatcacaaatttcatgcattcaaacatatcac 15368572  T
Q  171 cataatt 177  Q
    |||||||    
T  15368573 cataatt 15368579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 13377693 - 13377763
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  13377693 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 13377763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 49047757 - 49047687
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | |||||||| |||| ||||||    
T  49047757 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatgtcattataatt 49047687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 169
Target Start/End: Complemental strand, 39291598 - 39291538
Alignment:
Q  109 aacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||||||||||||||| ||||||||||||||||| ||| || |  |||||||||||||||    
T  39291598 aacatgcaatttcatcatcaacaattcaattatcatcaaattaacatactcaaacatatca 39291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 15977932 - 15977870
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||||||||||||||||| ||| ||||||||||||| ||| || |  |||||||||||||||    
T  15977932 tgaacatgcaatttcatcatcaataattcaattatcaacaaattaacatactcaaacatatca 15977870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 17224021 - 17223951
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| |||||||  ||||||||||||||||||  ||| ||| || | ||||||||||||||||||||    
T  17224021 tgaacatgaaatttcacaaacaacaattcaattatccacaacttcgtgcattcaaacatatcatcataatt 17223951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 9250630 - 9250671
Alignment:
Q  134 tcaattatcaccaatttcatgtactcaaacatatcatcataa 175  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  9250630 tcaattatcaccaatttcttgtattcaaacatatcatcataa 9250671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 17947579 - 17947546
Alignment:
Q  129 acaattcaattatcaccaatttcatgtactcaaa 162  Q
    ||||||||||||||||||||||||||||||||||    
T  17947579 acaattcaattatcaccaatttcatgtactcaaa 17947546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 13274941 - 13275011
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||| |  |||||||||||||||| || ||| ||| || | ||||||||||||||||||||    
T  13274941 tgaacatgaaattttactaacaacaattcaattaccaacaacttcttgcattcaaacatatcatcataatt 13275011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 44305096 - 44305034
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    |||||||||||||||  || ||||||||||||||||| ||||||||  |||  ||||||||||    
T  44305096 tgaacatgcaatttctacatcaacaattcaattatcatcaatttcacataccgaaacatatca 44305034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 13037112 - 13037048
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatca 172  Q
    |||||||||||||||||||||||  || ||||||||| ||| |||||| |  ||||||||||||||    
T  13037112 tgaacatgcaatttcatcaacaatcatacaattatcatcaa-ttcatgcatacaaacatatcatca 13037048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 6e-47; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 10913011 - 10913118
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10913011 ttagagcacaattcacaatatacccattttcacatattatggacatgcaatttcatcaacaacaattcaattatcaccaaattcatgtactcaaacatat 10913110  T
Q  168 catcataa 175  Q
    ||||||||    
T  10913111 catcataa 10913118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 38375814 - 38375711
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  38375814 agcacaattcacaatatacccattttcacaaattatgaacatgcaatttcatctacaacaattcaattatcatcaaattcatgtactcaaacatatcatc 38375715  T
Q  172 ataa 175  Q
    ||||    
T  38375714 ataa 38375711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 15517760 - 15517865
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||||||||||||||||||||||||  |||||   |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15517760 agcacaattcacaatatacccatttatacataccatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 15517859  T
Q  172 ataatt 177  Q
    ||||||    
T  15517860 ataatt 15517865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 8604970 - 8605057
Alignment:
Q  88 tacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataa 175  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8604970 tacccattttcacatactatgaacatgcaatttcatcaacaacaattcaattattaccaatttcatgtactcaaacatatcatcataa 8605057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 31412450 - 31412348
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31412450 agcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcatc 31412352  T
Q  172 ataa 175  Q
    ||||    
T  31412351 ataa 31412348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 177
Target Start/End: Complemental strand, 14814883 - 14814778
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||     
T  14814883 gagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcac 14814785  T
Q  171 cataatt 177  Q
    |||||||    
T  14814784 cataatt 14814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 6228746 - 6228638
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  6228746 ttagagcacaattcacaatatatc-attttcacatactatgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatat 6228648  T
Q  168 catcataatt 177  Q
    || |||||||    
T  6228647 caccataatt 6228638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 50313313 - 50313419
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||    
T  50313313 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcactaatttcatgcactcaaacatat 50313411  T
Q  168 catcataa 175  Q
    ||| ||||    
T  50313412 cattataa 50313419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 68 - 160
Target Start/End: Complemental strand, 43427637 - 43427546
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactca 160  Q
    ||||||||||||| |||||||| | ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43427637 ttagagcacaatttacaatatatc-attttcacatactatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactca 43427546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 41661691 - 41661796
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| |||||||||||||||||||| || || |||||| ||||||||||    
T  41661691 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcatcatttccatgtattcaaacatat 41661789  T
Q  168 catcata 174  Q
    |||||||    
T  41661790 catcata 41661796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 4145934 - 4145827
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||| ||||||||||| | ||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  4145934 ttagagcacagttcacaatatatc-attttcacatactatgaacatgtaatttcatcaacaacaattcaattatcaccaa-ttcatgtattcaaacatat 4145837  T
Q  168 catcataatt 177  Q
    || |||||||    
T  4145836 caccataatt 4145827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 13301571 - 13301482
Alignment:
Q  88 tacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||| | |||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  13301571 tacccattttcacatactatgaacatgcaatttcaccaacaataattcaattatcaccaatttcatgtattcaaacataccatcataatt 13301482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 13312227 - 13312138
Alignment:
Q  88 tacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||| | |||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  13312227 tacccattttcacatactatgaacatgcaatttcaccaacaataattcaattatcaccaatttcatgtattcaaacataccatcataatt 13312138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 4162326 - 4162218
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | ||||| || ||||||| ||||| ||||||||||||||||||||| ||||| ||||||||||    
T  4162326 ttagagcacaattcacaatatatc-attttcacatactatgaacttgtaatttcaccaacagcaattcaattatcaccaattttatgtattcaaacatat 4162228  T
Q  168 catcataatt 177  Q
    || |||||||    
T  4162227 caccataatt 4162218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 11882320 - 11882231
Alignment:
Q  88 tacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||| | ||||||| |||||||| |||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  11882320 tacccattttcacatactatgaacattcaatttcaccaacaataattcaattatcaccaatttcatgtattcaaacataccatcataatt 11882231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 34560052 - 34560133
Alignment:
Q  96 ttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  34560052 ttcacatattttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcattataatt 34560133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 33369044 - 33368948
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||||||||||| |||| | ||||||||||| | |||||||||||||||| |||| |||||||||||||||||||||||||| | ||||||||||||    
T  33369044 agcacaattcacagtataac-attttcacatactatgaacatgcaatttcaccaaccacaattcaattatcaccaatttcatgcattcaaacatatca 33368948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 11515609 - 11515505
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttca-tcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    |||||||||||||||||||||||||  ||||||  ||||| |||||||| | ||||||||||||||||||||| ||| | ||| ||||||||||||||||    
T  11515609 agcacaattcacaatatacccatttatacatatcatgaacgtgcaatttgaatcaacaacaattcaattatcatcaaatccatatactcaaacatatcat 11515510  T
Q  171 cataa 175  Q
    |||||    
T  11515509 cataa 11515505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 11402718 - 11402816
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||||||||||||||||||| ||||  |||     |||||||| |||||||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  11402718 gagcacaattcacaatatacctatttatacaccccatgaacatgaaatttcatcaacaacaattcaattatcatcaaattcatatactcaaacatatca 11402816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 12539188 - 12539090
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    |||||||||||||||||||| |||||  || |||  ||||||||||||||||||| ||||||||||||||||| ||| ||||  ||||||| |||||||    
T  12539188 gagcacaattcacaatatactcatttatacttatcatgaacatgcaatttcatcatcaacaattcaattatcaacaaattcacatactcaaccatatca 12539090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 12953128 - 12953198
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||| | ||||||||||||||||||||    
T  12953128 tgaacatgcaatttcaccaacaacaatctaattatcaccaatttcatgcattcaaacatatcatcataatt 12953198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 11638487 - 11638554
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaatta 140  Q
    |||||||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||    
T  11638487 agcacaattcacaatatacc-attttcacatactatgaacatgcaatttcaccaacaacaattcaatta 11638554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 9590849 - 9590770
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||| | |||||||| | ||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  9590849 tttcacatactttgaacatgaagtttcaccaacaacaattcaattatcaccaatttaatgcattcaaacatatcatcata 9590770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 3576521 - 3576451
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | ||||||||||||||||||||    
T  3576521 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataatt 3576451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 17191705 - 17191775
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||| ||||||| |||||||||| | ||||||||||||||||||||    
T  17191705 tgaacatgaaatttcaccaacaacaattcgattatcaacaatttcatgcattcaaacatatcatcataatt 17191775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 17204845 - 17204915
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||| ||||||| |||||||||| | ||||||||||||||||||||    
T  17204845 tgaacatgaaatttcaccaacaacaattcgattatcaacaatttcatgcattcaaacatatcatcataatt 17204915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 47784849 - 47784779
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | ||||||||||||||||||||    
T  47784849 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataatt 47784779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 17139656 - 17139742
Alignment:
Q  91 ccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| |||| | |||||||| ||||||| ||||||||||||||||| || ||| |||||| | |||||||| |||||||||||    
T  17139656 ccattttctcatagtttgaacatgaaatttcaccaacaacaattcaattaccaacaacttcatgcattcaaacatgtcatcataatt 17139742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 39656690 - 39656760
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||  | ||||||||| ||||||||||    
T  39656690 tgaacatgaaatttcactaacaacaattcaattatcaccaatttcataaattcaaacataacatcataatt 39656760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 15550726 - 15550824
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    |||||||||||||||  |||||||||  | | ||  ||||||||||||||||||| ||| ||||||||||||| ||| || |  |||||||||||||||    
T  15550726 gagcacaattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatactcaaacatatca 15550824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 30207380 - 30207450
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| | ||||| |||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  30207380 tgaacatgaagtttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 30207450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 48421741 - 48421803
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||||||||||||||||| ||||||||||||||||| ||| || |  |||||||||||||||    
T  48421741 tgaacatgcaatttcatcaccaacaattcaattatcatcaaattaacatactcaaacatatca 48421803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 12488809 - 12488762
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatg 154  Q
    |||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  12488809 tgaacatgaaatttcatcaacaacaattcaattatcaacaacttcatg 12488762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 14080673 - 14080740
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||||| ||||  ||| ||||||||||||||| |||||||||| |  ||||||||||||||||    
T  14080673 tgaacatgcaaattcactaaccacaattcaattatcatcaatttcatgcatacaaacatatcatcata 14080740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 1990931 - 1991012
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcat 153  Q
    ||||| ||||||||||||| | |||||||  || | ||||||||||||||||  ||||| ||||||||||| |||||||||||    
T  1990931 gagcataattcacaatatatc-attttcatctactatgaacatgcaatttcacaaacaataattcaattattaccaatttcat 1991012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 14059311 - 14059226
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||| |||| | |||||||| ||||||   || |||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  14059311 cattttctcatactttgaacatgaaatttctctaaaaacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 14059226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 14177101 - 14177065
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatca 143  Q
    ||||||||||||||||||| |||||||||||||||||    
T  14177101 tgaacatgcaatttcatcatcaacaattcaattatca 14177065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 16880287 - 16880357
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||| |  ||||||||||||||||||| ||| ||| || | |||||||||||||| |||||    
T  16880287 tgaacatgaaattttactaacaacaattcaattatcaacaacttcttgcattcaaacatatcatcgtaatt 16880357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 18970049 - 18970147
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||| |||||||||  ||||||||| || | ||  |||||||| |||||||||| |||||||||||||| || ||| || |  |||| ||||||||||    
T  18970049 gagcataattcacaaactacccatttacatacatcatgaacatgaaatttcatcatcaacaattcaattaacatcaaattaacatacttaaacatatca 18970147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 174
Target Start/End: Complemental strand, 21167131 - 21167097
Alignment:
Q  140 atcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||||||||||| |||||||||||||||||    
T  21167131 atcaccaatttcatgtattcaaacatatcatcata 21167097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 15876241 - 15876302
Alignment:
Q  116 aatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||||||||||||||| |||||| |||  ||||| | | |||||||| |||||||||    
T  15876241 aatttcatcaacaacaattcagttatcaacaacatcatgcatttaaacatattatcataatt 15876302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 92; Significance: 2e-44; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 68079 - 67972
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||    
T  68079 ttagagcacaattcacaatatacccattttcacatattatgaacatgcaatttcatctacaacaattcaattatcaccaaattcatgtacttaaacatat 67980  T
Q  168 catcataa 175  Q
    ||||||||    
T  67979 catcataa 67972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 131941 - 132047
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| |  ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  131941 ttagagcacaattcacaatatatc-attttcacatactacgaacatgcaattttaccaacaacaattcaattatcaccaatttcatgtactcaaacatat 132039  T
Q  168 catcataa 175  Q
    ||||||||    
T  132040 catcataa 132047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 109756 - 109821
Alignment:
Q  109 aacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    |||||| |||||||| ||||||||||||||||||| ||| |||||| | |||||||||||||||||    
T  109756 aacatgaaatttcattaacaacaattcaattatcaacaacttcatggattcaaacatatcatcata 109821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 103005 - 102935
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| |||||||  |||||||||||||||||||  || |||||| | ||||||||||||||||||||    
T  103005 tgaacatgaaatttcactaacaacaattcaattatcaaaaacttcatgcattcaaacatatcatcataatt 102935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 23222877 - 23222983
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23222877 ttagagcacaattcacaatatatc-attttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 23222975  T
Q  168 catcataa 175  Q
    ||||||||    
T  23222976 catcataa 23222983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 22462218 - 22462112
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22462218 ttagagcaaaattcacaatatacc-actttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 22462120  T
Q  168 catcataa 175  Q
    ||||||||    
T  22462119 catcataa 22462112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 23222042 - 23222148
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23222042 ttagagcataattcacaatatacc-attttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactctaacatat 23222140  T
Q  168 catcataa 175  Q
    ||||||||    
T  23222141 catcataa 23222148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 19672415 - 19672519
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  19672415 gagcacaattcacaatatatc-attttcacatattatgaacatgcaatttcattaacaacaattcaattatcaccaatttcatgtactcaaacataacat 19672513  T
Q  171 cataat 176  Q
    ||||||    
T  19672514 cataat 19672519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 31467712 - 31467611
Alignment:
Q  75 acaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||||||||||||||||  |||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31467712 acaattcacaatatacccatttatacataccatgaacatgcaatttcattaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 31467613  T
Q  175 at 176  Q
    ||    
T  31467612 at 31467611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 19854281 - 19854387
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||| |||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||     
T  19854281 ttagagcacaactcacaatatacc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtactcaaacataa 19854379  T
Q  168 catcataa 175  Q
    ||||||||    
T  19854380 catcataa 19854387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 17013756 - 17013654
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||||||||||||||||| | ||||||||||| | |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  17013756 agcacaattcacaatatatc-attttcacatactatgaacaggcaatttcaccaacaacaattcaattttcaccaatttcatgtactcaaacatatcatc 17013658  T
Q  172 ataa 175  Q
    ||||    
T  17013657 ataa 17013654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 34966993 - 34967099
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||| ||||||||||||||| |  |||||||||| | ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  34966993 ttagagtacaattcacaatatatct-ttttcacatactatgaacatgcaatttcacgaacaacaattcaattatcaccaatttcatgtactcaaacatat 34967091  T
Q  168 catcataa 175  Q
    ||||||||    
T  34967092 catcataa 34967099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 70 - 177
Target Start/End: Complemental strand, 18629727 - 18629621
Alignment:
Q  70 agagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    |||||| ||||||||||||||| | ||||||||| | |||||||||||||||| |||||||||||||||||||| |||||||||| | ||||||||||||    
T  18629727 agagcataattcacaatatacc-actttcacatactttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatca 18629629  T
Q  170 tcataatt 177  Q
    ||||||||    
T  18629628 tcataatt 18629621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 19175280 - 19175383
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    ||||||||||||||||||| |||||  ||||||  |||||||||||||| |||||||||||||||||||||| |||||| || |||||||||||||||||    
T  19175280 agcacaattcacaatatactcatttatacatatcatgaacatgcaattttatcaacaacaattcaattatcatcaattttatatactcaaacatatcatc 19175379  T
Q  172 ataa 175  Q
    ||||    
T  19175380 ataa 19175383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 72 - 171
Target Start/End: Original strand, 21931333 - 21931432
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||| ||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  21931333 agcataattcacaatatacccatttatacatatcatgaacatgcaatttcatcaacaacaattcaattatcatcaatttcatatattcaaacatatcatc 21931432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 22848144 - 22848249
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||||||||||||||||| | ||||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||| || | | |||||||||||    
T  22848144 gagcacaattcacaatataac-attttcacatactatgaacatgaaatttcaccaacaacaattcaattatcaccaatttcttgcatttaaacatatcat 22848242  T
Q  171 cataatt 177  Q
    |||||||    
T  22848243 cataatt 22848249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 17557112 - 17557031
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  17557112 tttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgca-tcaaacatatcatcataatt 17557031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 17083318 - 17083211
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||  ||||| | ||||||||||| | ||||||| |||||||| |||||||||||||||||||||||| |||||| | ||||||||||    
T  17083318 ttagagcacaattcaacatatatc-attttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaa-ttcatgcattcaaacatat 17083221  T
Q  168 catcataatt 177  Q
    ||||||||||    
T  17083220 catcataatt 17083211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 16136392 - 16136495
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    ||||||||| ||||||||||||| |  ||||||  |||||||||||||||||||| ||| |||||||||||| ||||||||| || |||||||||| |||    
T  16136392 agcacaatttacaatatacccatctatacatatcatgaacatgcaatttcatcaaaaactattcaattatcatcaatttcatatattcaaacatattatc 16136491  T
Q  172 ataa 175  Q
    ||||    
T  16136492 ataa 16136495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 32352173 - 32352278
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||| |||||||||||||||| | ||||||||||| | ||||||| |||||||| ||  ||||||||||||||||||||||||||||| ||||| |||     
T  32352173 ttagaacacaattcacaatatatc-attttcacatactatgaacatacaatttcaccataaacaattcaattatcaccaatttcatgtattcaaatatac 32352271  T
Q  168 catcata 174  Q
    |||||||    
T  32352272 catcata 32352278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 25651389 - 25651461
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  25651389 tttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 25651461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 22361848 - 22361778
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  22361848 tgaacatgaaatttcagcaacaacaattcaattatcaacaatttcatgcattcaaacatatcatcataatt 22361778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 29605579 - 29605683
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||||||||||||||||  | ||||||||||| | |||||||| ||||||| ||||||||||||||||||||| || |||||| | ||||||||||||     
T  29605579 gagcacaattcacaatatttc-attttcacatactatgaacatgtaatttcaccaacaacaattcaattatcactaa-ttcatgcattcaaacatatcac 29605676  T
Q  171 cataatt 177  Q
    |||||||    
T  29605677 cataatt 29605683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 29160424 - 29160343
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaattt 150  Q
    ||||||||||| |||||||||| | |||||||||||   ||||||||||||||||  ||||||||||||||||||||||||||    
T  29160424 ttagagcacaactcacaatatatc-attttcacataccatgaacatgcaatttcactaacaacaattcaattatcaccaattt 29160343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 33538490 - 33538386
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||| ||||||||| ||| | | ||||||||| | |||||||||||||||| |||||||||||||||| |||||||||||||| | ||||| ||||    
T  33538490 ttagagcataattcacaacatatc-actttcacatactttgaacatgcaatttcaccaacaacaattcaatt-tcaccaatttcatgcattcaaatatat 33538393  T
Q  168 catcata 174  Q
    || ||||    
T  33538392 caccata 33538386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 18381766 - 18381696
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| ||||||| |||||||||||| ||| |||||||| ||||| ||||||||||||||    
T  18381766 tgaacatgaaatttcaccaacaaccattcaattatcaacaacttcatgtattcaaaaatatcatcataatt 18381696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 21623332 - 21623402
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  21623332 tgaacatgaaatttcagcaacaacaattcaattatcaacaacttcatgcattcaaacataccatcataatt 21623402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 22585637 - 22585575
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||||||||||||||||| ||||||||||||||||| ||| || |  |||||||||||||||    
T  22585637 tgaacatgcaatttcatcatcaacaattcaattatcatcaaattaaaatactcaaacatatca 22585575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 22590468 - 22590406
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||||||||||||||||| ||||||||||||||||| ||| || |  |||||||||||||||    
T  22590468 tgaacatgcaatttcatcatcaacaattcaattatcatcaaattaaaatactcaaacatatca 22590406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 28195192 - 28195106
Alignment:
Q  91 ccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| |||| | |||||||| ||||| |  ||||||||||||||||||| ||| |||||  | ||||||||||||||||||||    
T  28195192 ccattttctcatactatgaacatgaaattttactaacaacaattcaattatcaacaacttcatacattcaaacatatcatcataatt 28195106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 18399088 - 18399172
Alignment:
Q  93 attttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||| |||| | |||||||| ||||||   ||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  18399088 attttctcatactttgaacatgaaatttctctaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 18399172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 171
Target Start/End: Original strand, 33324857 - 33324920
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||||| |  |||||||||||||    
T  33324857 tgaacatgcaaattca-caacaacaattcaattatcaacaatttcatgcatacaaacatatcatc 33324920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 35136095 - 35136032
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||||| |  |||||||||||||    
T  35136095 tgaacatgcaaattca-caacaacaattcaattatcatcaatttcatgcatacaaacatatcatc 35136032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 16887875 - 16887808
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||||| |||| |||||||| ||||||||||| |||||||||| |  ||||||||| ||||||    
T  16887875 tgaacatgcaaattcaccaacaacagttcaattatcatcaatttcatgcatacaaacatattatcata 16887808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 15889797 - 15889735
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||||||||||||||||| |||||| |||||||||| ||| || |  |||||||||||||||    
T  15889797 tgaacatgcaatttcatcatcaacaaatcaattatcatcaaattaacatactcaaacatatca 15889735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 25640646 - 25640585
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatc 168  Q
    ||||||||||||||||||| ||| ||||||||||||| ||| || |  ||||||||||||||    
T  25640646 tgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatactcaaacatatc 25640585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 26512270 - 26512367
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatc 168  Q
    ||||| |||||||||  |||||||||  | ||||  | |||||| ||||||| |||||||||||||| ||||| ||| ||| ||||| ||||||||||    
T  26512270 gagcataattcacaaactacccatttatatatatcataaacatgtaatttcaacaacaacaattcaaatatcatcaaattcttgtacccaaacatatc 26512367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 26517386 - 26517483
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatc 168  Q
    ||||| |||||||||  |||||||||  | ||||  | |||||| ||||||| |||||||||||||| ||||| ||| ||| ||||| ||||||||||    
T  26517386 gagcataattcacaaactacccatttatatatatcataaacatgtaatttcaacaacaacaattcaaatatcatcaaattcttgtacccaaacatatc 26517483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 26089863 - 26089960
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatc 168  Q
    ||||| |||| ||||  |||||||||||| | ||| ||||| ||||||||||||| |||||||||| ||| || ||| || |  || |||||||||||    
T  26089863 gagcataatttacaaactacccattttcatacattatgaacttgcaatttcatcatcaacaattcatttaacatcaaattaacatattcaaacatatc 26089960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 175
Target Start/End: Complemental strand, 29158428 - 29158399
Alignment:
Q  146 aatttcatgtactcaaacatatcatcataa 175  Q
    ||||||||||||||||||||||||||||||    
T  29158428 aatttcatgtactcaaacatatcatcataa 29158399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 4e-42; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 22497330 - 22497224
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22497330 ttagagcacaattcacaatatatc-attttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatctactcaaacatat 22497232  T
Q  168 catcataa 175  Q
    ||||||||    
T  22497231 catcataa 22497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 24552691 - 24552585
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24552691 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtactcaaacatat 24552593  T
Q  168 catcataa 175  Q
    ||||||||    
T  24552592 catcataa 24552585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 18261592 - 18261486
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18261592 ttagagcacaattcacaatatatc-attttcacatactatgaagatgcaatttcaccaacaacaattcaattatcaccaatttcatgtactcaaacatat 18261494  T
Q  168 catcataa 175  Q
    ||||||||    
T  18261493 catcataa 18261486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 33172354 - 33172460
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  33172354 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatat 33172452  T
Q  168 catcataa 175  Q
    ||||||||    
T  33172453 catcataa 33172460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 45559058 - 45558952
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  45559058 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcactaatttcatgtactcaaacatat 45558960  T
Q  168 catcataa 175  Q
    ||||||||    
T  45558959 catcataa 45558952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 22742890 - 22742997
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  22742890 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcactcaaacatat 22742988  T
Q  168 catcataat 176  Q
    || ||||||    
T  22742989 caccataat 22742997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 45465246 - 45465141
Alignment:
Q  69 tagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatc 168  Q
    ||||||| ||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  45465246 tagagcataattcacaatataac-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtactcaaacataac 45465148  T
Q  169 atcataa 175  Q
    |||||||    
T  45465147 atcataa 45465141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 16002123 - 16002230
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||||| ||||||||| |||||||||||||  ||||||| |||||||||||||||||||| |||||||| ||| ||||| |||||||||||||    
T  16002123 ttagagcacaatttacaatatactcattttcacatatcatgaacatacaatttcatcaacaacaattaaattatcatcaaattcatatactcaaacatat 16002222  T
Q  168 catcataa 175  Q
    ||||||||    
T  16002223 catcataa 16002230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 18041646 - 18041547
Alignment:
Q  75 acaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||||||||| | ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  18041646 acaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcttgtactcaaacatatcgtcata 18041548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 15933450 - 15933532
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  15933450 tttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataatt 15933532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 77 - 175
Target Start/End: Complemental strand, 38635760 - 38635663
Alignment:
Q  77 aattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataa 175  Q
    ||||||||||||| | |||||| |||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  38635760 aattcacaatatatc-attttcgcatattatgaacatgcaatttcaccaacaacaattcaattatcactaatttcatgtattcaaacatatcatgataa 38635663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 37653737 - 37653629
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| |||||||||||||||||||||||| |||||| |  |||||| ||    
T  37653737 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcagcaacaacaattcaattatcaccaaattcatgcatacaaacacat 37653639  T
Q  168 catcataatt 177  Q
    || |||||||    
T  37653638 caccataatt 37653629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 26011646 - 26011728
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  26011646 tttcacatactttgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataatt 26011728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 22887893 - 22887993
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    ||||||||||||||||||| |||||  ||||||  |||||||||||||||||   ||||||||||| ||||| ||| ||||| |||||||||||||||||    
T  22887893 agcacaattcacaatatactcatttatacatatcatgaacatgcaatttcat---caacaattcaaatatcatcaaattcatatactcaaacatatcatc 22887989  T
Q  172 ataa 175  Q
    ||||    
T  22887990 ataa 22887993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 33528551 - 33528659
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||  ||||| | ||||||| ||| |  ||| || ||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  33528551 ttagagcacaattcaacatatatc-attttcatatactaagaagatacaatttcatcaacaacaattcaattatcaacaatttcatgcattcaaacatat 33528649  T
Q  168 catcataatt 177  Q
    ||||||||||    
T  33528650 catcataatt 33528659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 5854778 - 5854848
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||||||| | ||||||||||||||||||||    
T  5854778 tgaacatgctatttcaccaacaacaattcaattatcgccaatttcatgcattcaaacatatcatcataatt 5854848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 19331432 - 19331340
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||| ||||||||||||| | ||||||||||| | |||||||||||||||| ||||||   |||||||||||||||||||||||| ||||||||||    
T  19331432 gagcataattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaa---ttcaattatcaccaatttcatgtattcaaacatat 19331340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 18118407 - 18118311
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatc 168  Q
    |||||||||||| ||||||| ||||   |||||  ||||||||||||||||||||||||||||||||||||| ||| || || ||| ||||||||||    
T  18118407 agcacaattcaccatataccaatttatgcatatcatgaacatgcaatttcatcaacaacaattcaattatcatcaaatttatatacgcaaacatatc 18118311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 27233162 - 27233103
Alignment:
Q  118 tttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27233162 tttcaccaaaaacaattcaattatcaccaatttcatgtattcaaacatatcatcataatt 27233103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 23149930 - 23150013
Alignment:
Q  95 tttcacatattgtgaa-catgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||||| |||| |||| ||||||| ||||||||||||| ||||||| | ||||||| | ||||||||||||||||||||    
T  23149930 tttcacatattttgaatcatgaaatttcaccaacaacaattcatttatcactagtttcatgcattcaaacatatcatcataatt 23150013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 25296322 - 25296389
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    |||||||||||||||| ||||| ||||||||||||||  ||||||||| | |||||||||||||||||    
T  25296322 tgaacatgcaatttcaccaacagcaattcaattatcattaatttcatgcattcaaacatatcatcata 25296389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 25758342 - 25758409
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    |||||||||||||||| ||||| ||||||||||||||  ||||||||| | |||||||||||||||||    
T  25758342 tgaacatgcaatttcaccaacagcaattcaattatcattaatttcatgcattcaaacatatcatcata 25758409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 17285368 - 17285438
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | | ||||||||||||||||||    
T  17285368 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcatttaaacatatcatcataatt 17285438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 21198235 - 21198165
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||  ||| |||||| | ||||||||||||||||||||    
T  21198235 tgaacatgaaatttcaccaacaacaattcaattatctacaacttcatgcattcaaacatatcatcataatt 21198165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 23151916 - 23151846
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| ||||||||||||||||||||| | ||||||| | ||||| ||||||||||||||    
T  23151916 tgaacatgaaatttcaccaacaacaattcaattatcactagtttcatgcattcaaatatatcatcataatt 23151846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 23158312 - 23158395
Alignment:
Q  95 tttcacatattgtgaa-catgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||| |||| |||| |||| ||||||| ||||||||||||| ||||||| | ||||||| | ||||||||||||||||||||    
T  23158312 tttcacgtattttgaatcatgaaatttcaccaacaacaattcatttatcactagtttcatgcattcaaacatatcatcataatt 23158395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 21259618 - 21259520
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    |||||||||||||||  |||||||||  | | ||  ||||||||||||||||||| ||| ||||||||||||| ||| || |  |||||||||||||||    
T  21259618 gagcacaattcacaaactacccatttatatacatcatgaacatgcaatttcatcatcaaaaattcaattatcatcaaattaacatactcaaacatatca 21259520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 23837362 - 23837432
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| |||||||  ||||||||||||||||||| ||| |||||| | | ||||||||||||||||||    
T  23837362 tgaacatgaaatttcaataacaacaattcaattatcaacaacttcatgcatttaaacatatcatcataatt 23837432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 92 - 174
Target Start/End: Original strand, 29306566 - 29306648
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    |||||||||| | | ||||||| ||| |||| ||||||||||||||||||||| ||||||||| | |  ||||||||||||||    
T  29306566 cattttcacaaactttgaacatacaaattcaccaacaacaattcaattatcactaatttcatgcattagaacatatcatcata 29306648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 23226156 - 23226092
Alignment:
Q  110 acatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    |||||||| |||| ||||||||| |||||||||| |||||||||| |  ||||||||||||||||    
T  23226156 acatgcaaattcaccaacaacaactcaattatcatcaatttcatgcatacaaacatatcatcata 23226092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 174
Target Start/End: Complemental strand, 33611148 - 33611069
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||| | |||||||| | ||||| ||||||||||  ||| ||||||||||||||| | ||||| |||||||||||    
T  33611148 tttcacatactttgaacatgaattttcaccaacaacaatctaatgatcaccaatttcatgcattcaaatatatcatcata 33611069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 22981437 - 22981507
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||   ||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  22981437 tgaacatgaaatttctctaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 22981507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 38533797 - 38533883
Alignment:
Q  91 ccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| |||| | ||||||||  |||||   ||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  38533797 ccattttctcatactttgaacatgagatttctctaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 38533883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 15969970 - 15970029
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttc 151  Q
    |||||||| ||| | ||| ||| |||||||| ||||||||| ||||||||||||||||||    
T  15969970 cattttcatatactttgatcattcaatttcaccaacaacaaatcaattatcaccaatttc 15970029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 17502325 - 17502387
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    |||||||||||||||||||  ||||||||||| |||| ||| || |  |||||||||||||||    
T  17502325 tgaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatactcaaacatatca 17502387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 20175857 - 20175795
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    |||||||||||||||  || ||||||||||||||||| ||||||||  |||  ||||||||||    
T  20175857 tgaacatgcaatttctacatcaacaattcaattatcatcaatttcacataccgaaacatatca 20175795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 20220584 - 20220522
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    |||||||||||||||  || ||||||||||||||||| ||||||||  |||  ||||||||||    
T  20220584 tgaacatgcaatttctacatcaacaattcaattatcatcaatttcacataccgaaacatatca 20220522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 4234021 - 4234081
Alignment:
Q  109 aacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    |||||||||||||||||  ||||||||||| |||| ||| || |  |||||||||||||||    
T  4234021 aacatgcaatttcatcattaacaattcaatcatcatcaaattaacatactcaaacatatca 4234081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 16039008 - 16038936
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatca 143  Q
    ||||| |||| ||||  |||||||||||| | ||  ||||| ||||||||||||| |||||||||| ||||||    
T  16039008 gagcataatttacaaactacccattttcatacatcatgaacttgcaatttcatcatcaacaattcatttatca 16038936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 23218043 - 23218103
Alignment:
Q  109 aacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    |||||||||||||||||  ||||||||||| |||| ||| || |  |||||||||||||||    
T  23218043 aacatgcaatttcatcattaacaattcaatcatcatcaaattaacatactcaaacatatca 23218103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 4e-42; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 23417367 - 23417474
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||    
T  23417367 ttagagcacaattcacaatataccaattttcacatattatgaacatgcaatttcatcaacaacaattcaatcatcaccaaattcatgtactcaaacaaat 23417466  T
Q  168 catcataa 175  Q
    ||||||||    
T  23417467 catcataa 23417474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 16835420 - 16835314
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  16835420 ttagagcacaattcacaatatact-attttcacatattatgaacatgcaatttcatcaacaacaaatcaattatcaccaatttcatgtacccaaacatat 16835322  T
Q  168 catcataa 175  Q
    ||||||||    
T  16835321 catcataa 16835314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 21109876 - 21109979
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  21109876 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattattaccaatttcatgtactcaaacatat 21109974  T
Q  168 catca 172  Q
    |||||    
T  21109975 catca 21109979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 22885771 - 22885876
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||    
T  22885771 gagcacaattcacaatataac-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcat 22885869  T
Q  171 cataatt 177  Q
    |||||||    
T  22885870 cataatt 22885876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 26559936 - 26559831
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  26559936 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatat 26559838  T
Q  168 catcata 174  Q
     ||||||    
T  26559837 aatcata 26559831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 23234606 - 23234500
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | | ||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||    
T  23234606 ttagagcacaattcacaatatatc-attttcacatactataaacatgcaattacaccaacaacaattcaattatcaccaatttcatgtacttaaacatat 23234508  T
Q  168 catcataa 175  Q
    ||||||||    
T  23234507 catcataa 23234500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 24084203 - 24084311
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||| ||||| | ||||||||||||||||||||||||||||||||| ||||||||||    
T  24084203 ttagagcacaattcacaatatatc-attttcacatactatgaacatgtaattttaccaacaacaattcaattatcaccaatttcatgtattcaaacatat 24084301  T
Q  168 catcataatt 177  Q
    || |||||||    
T  24084302 caccataatt 24084311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 29918091 - 29918199
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||| ||||||||||||| || | |||||||| | |||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  29918091 ttagagcataattcacaatatatcc-tgttcacatactatgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatat 29918189  T
Q  168 catcataatt 177  Q
    ||||||||||    
T  29918190 catcataatt 29918199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 19873933 - 19873993
Alignment:
Q  115 caatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataa 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19873933 caatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataa 19873993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 21310807 - 21310725
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    |||||||||| | | |||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  21310807 cattttcacaaactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcata 21310725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 11763626 - 11763523
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||||||||||  |||  |  |||||||| ||||||||||||| ||| |||||||||| ||| ||||| |||||||||||||    
T  11763626 ttagagcacaattcacaatatacccatttatacacctcatgaacatgaaatttcatcaacatcaactcaattatcatcaaattcatctactcaaacatat 11763527  T
Q  168 catc 171  Q
    ||||    
T  11763526 catc 11763523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 21222691 - 21222621
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  21222691 tgaacatgcaatttcaccaacaacaatttaattatcaccaatttcatgcattcaaacatatcatcataatt 21222621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 21297273 - 21297191
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    |||||||||| | | |||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||||||||||    
T  21297273 cattttcacaaactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcgttcaaacatatcatcata 21297191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 37983490 - 37983595
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||| ||||||||||||| | | ||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||||||| | ||||| ||||    
T  37983490 ttagagcataattcacaatatatc-actttcacatactttgaatatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaatatat 37983588  T
Q  168 catcata 174  Q
    || ||||    
T  37983589 caccata 37983595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 23981599 - 23981529
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  23981599 tgaacatgcaaattcaccaacaacaattcaattatcaccaatttcatgcatacaaacatatcatcataatt 23981529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 21617181 - 21617250
Alignment:
Q  108 gaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||  ||||||||| |||||||||||||||||||| | ||||||||||||||||||||    
T  21617181 gaacatgcaatttcactaacaacaatccaattatcaccaatttcatgcattcaaacatatcatcataatt 21617250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 6456753 - 6456855
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||| | ||||||||||| | |||||||||||||||| ||||   |||||||||||| ||||||||||||| |||||| |||| |    
T  6456753 gagcataattcacaatatatc-attttcacatactatgaacatgcaatttcaccaac---aattcaattatcgccaatttcatgtattcaaacgtatctt 6456848  T
Q  171 cataatt 177  Q
    |||||||    
T  6456849 cataatt 6456855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 19862373 - 19862443
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | ||||||||||||||||||||    
T  19862373 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataatt 19862443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 5450926 - 5450856
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  5450926 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 5450856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 432612 - 432697
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||| |||| | |||||||| | ||||| |||||||||||||||||||| ||| | |||| | ||||||||||||||||||||    
T  432612 cattttctcatactttgaacatgaagtttcaccaacaacaattcaattatcaacaactacatgcattcaaacatatcatcataatt 432697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 3674044 - 3674098
Alignment:
Q  125 aacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatttg 179  Q
    ||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||    
T  3674044 aacaacaattcaattatcaacaacttaatgtattcaaacatatcatcataatttg 3674098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 24225438 - 24225383
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcat 123  Q
    ||||||||||| |||||||||||||||||  ||||||  |||||||||||||||||    
T  24225438 ttagagcacaaatcacaatatacccatttatacatatcatgaacatgcaatttcat 24225383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 7728584 - 7728630
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcat 153  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  7728584 tgaacatgaaatttcaccaacaacaaatcaattatcaccaatttcat 7728630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 22662766 - 22662730
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatca 143  Q
    ||||||||||||||||||| |||||||||||||||||    
T  22662766 tgaacatgcaatttcatcatcaacaattcaattatca 22662730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 177
Target Start/End: Complemental strand, 32966246 - 32966162
Alignment:
Q  93 attttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||| ||| | ||| ||| |||||||| ||||||||| |||||||||||||||||| |  | || |||||| ||||||||||    
T  32966246 attttcatatactttgatcattcaatttcaccaacaacaaatcaattatcaccaatttcttacattccaacataacatcataatt 32966162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 28902366 - 28902425
Alignment:
Q  118 tttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||| |||||||||||||||||||| ||| || ||| | ||||||||| ||||||||||    
T  28902366 tttcaccaacaacaattcaattatcaacaactttatgcattcaaacataacatcataatt 28902425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 28938761 - 28938820
Alignment:
Q  118 tttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||| |||||||||||||||||||| ||| || ||| | ||||||||| ||||||||||    
T  28938761 tttcaccaacaacaattcaattatcaacaactttatgcattcaaacataacatcataatt 28938820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 174
Target Start/End: Complemental strand, 5621844 - 5621810
Alignment:
Q  140 atcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||||||||||| |||||||||||||||||    
T  5621844 atcaccaatttcatgtattcaaacatatcatcata 5621810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 16595691 - 16595741
Alignment:
Q  127 caacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  16595691 caacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 16595741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 20194150 - 20194258
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactc-aaacata 166  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  20194150 ttagagcacaattcacaatatacccattatcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaaattcatatactcaaaacata 20194249  T
Q  167 tcatcataa 175  Q
    |||||||||    
T  20194250 tcatcataa 20194258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 33397478 - 33397584
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||||||||||||||   ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33397478 ttagagcacaattcacaatatatt-attttcacatattatgaacatgcaatttcatcaacaacaactcaattatcaccaatttcatgtactcaaacatat 33397576  T
Q  168 catcataa 175  Q
    ||||||||    
T  33397577 catcataa 33397584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 40436390 - 40436284
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  40436390 ttagagcacaattcacaatatatc-attttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatatattcaaacatat 40436292  T
Q  168 catcataa 175  Q
    ||||||||    
T  40436291 catcataa 40436284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 5768290 - 5768184
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5768290 ttagagcacaattcacaatatatc-attttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaatttcatgtactcaaacatat 5768192  T
Q  168 catcataa 175  Q
    ||||||||    
T  5768191 catcataa 5768184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 25093985 - 25094091
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||| |||||||||||||||| | |||||| |||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25093985 ttagaacacaattcacaatatatc-attttctcatattatggacatgcaatttcatcaacaacaattcaattatcaccaaattcatgtactcaaacatat 25094083  T
Q  168 catcataa 175  Q
    ||||||||    
T  25094084 catcataa 25094091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 52400761 - 52400865
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||||||||||||||||| | ||||||||||| | |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||| |    
T  52400761 agcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaactatcaccaatttcatgtattcaaacatatcacc 52400859  T
Q  172 ataatt 177  Q
    ||||||    
T  52400860 ataatt 52400865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 176
Target Start/End: Complemental strand, 8538027 - 8537924
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  8538027 agcacaattcacaatataac-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcactaatttcatgcattcaaacatatcatc 8537929  T
Q  172 ataat 176  Q
    |||||    
T  8537928 ataat 8537924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 176
Target Start/End: Complemental strand, 8603266 - 8603163
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||    
T  8603266 agcacaattcacaatataac-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcactaatttcatgcattcaaacatatcatc 8603168  T
Q  172 ataat 176  Q
    |||||    
T  8603167 ataat 8603163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 49997402 - 49997296
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||| ||||||||||||||| | ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  49997402 ttagagtacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatatattcaaacatat 49997304  T
Q  168 catcataa 175  Q
    || |||||    
T  49997303 caccataa 49997296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 21195143 - 21195248
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||| | ||||||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||     
T  21195143 gagcataattcacaatatatc-attttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcac 21195241  T
Q  171 cataatt 177  Q
    |||||||    
T  21195242 cataatt 21195248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 37233943 - 37233875
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataa 175  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  37233943 tgaacatgcaattttaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataa 37233875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 17609092 - 17609162
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| | ||||| ||||||||||||||    
T  17609092 tgaacatgcaatttcaccaacaacaatccaattatcaccaatttcatgcattcaaatatatcatcataatt 17609162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 19603246 - 19603331
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||| | ||| ||| |||||||| ||||||||| ||||||||||||||||||||  | ||||||||| ||||||||||    
T  19603246 cattttcatatactttgatcattcaatttcaccaacaacaaatcaattatcaccaatttcatacattcaaacataacatcataatt 19603331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 22143444 - 22143377
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||||||| |  |||||| |||||||||    
T  22143444 tgaacatgcaaattcaccaacaacaattcaattatcacaaatttcatgcatacaaacacatcatcata 22143377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 13376942 - 13376872
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| | ||||||||| |||||||| ||| |||||| | ||||||||||||||||||||    
T  13376942 tgaacatgaaatttcaacgacaacaatttaattatcaacaacttcatgcattcaaacatatcatcataatt 13376872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 20177339 - 20177409
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| ||| || | | ||||||||||||||||||    
T  20177339 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcgtgcattaaaacatatcatcataatt 20177409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 20955514 - 20955452
Alignment:
Q  115 caatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||||  ||||||||||||||||||||  | ||||||||| ||||||||||    
T  20955514 caatttcaccaacaacagatcaattatcaccaatttcatacattcaaacataacatcataatt 20955452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 51627763 - 51627677
Alignment:
Q  91 ccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| |||| | |||||||| | |||||  |||||||||||||| |||| ||| |||||| | |||| |||||||||||||||    
T  51627763 ccattttctcatactttgaacatgaagtttcactaacaacaattcaatcatcaacaaattcatgcattcaagcatatcatcataatt 51627677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 104
Target Start/End: Complemental strand, 76494 - 76458
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatat 104  Q
    ||||||||||||||||||||||||| |||||||||||    
T  76494 ttagagcacaattcacaatataccctttttcacatat 76458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 38033772 - 38033688
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataat 176  Q
    |||||||| ||| | ||| ||| |||||||| |||||||||||||||||||| ||||||| |  |  |||||||| |||||||||    
T  38033772 cattttcatatactttgatcattcaatttcaccaacaacaattcaattatcatcaatttcttacatacaaacataacatcataat 38033688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 16656813 - 16656872
Alignment:
Q  118 tttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||| |||||||||||||||||||| ||| || ||| | ||||||||| ||||||||||    
T  16656813 tttcaccaacaacaattcaattatcaacaactttatgcattcaaacataacatcataatt 16656872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 22829500 - 22829438
Alignment:
Q  115 caatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||  |||||||| ||||||||||||| ||||||  | ||||||||| ||||||||||    
T  22829500 caatttcactaacaacaaatcaattatcaccagtttcatacattcaaacataacatcataatt 22829438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 27674968 - 27675030
Alignment:
Q  115 caatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||| ||||| |||||||||||||||||| |  | ||||||||| ||||||||||    
T  27674968 caatttcaccaataacaaatcaattatcaccaatttcttacattcaaacataacatcataatt 27675030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 2893 - 2787
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  2893 ttagagcacaattcacaatatacc-attttcacatattatgaaaatgcaattttatcaacaacgattcaattatcaccaatttcatgtactcaaacatat 2795  T
Q  168 catcataa 175  Q
    ||||||||    
T  2794 catcataa 2787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 84; Significance: 9e-40; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 37684 - 37790
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  37684 ttagagcacaattcacaatatacc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattttcaccaatttcatgtactcaaacatat 37782  T
Q  168 catcataa 175  Q
    ||||||||    
T  37783 catcataa 37790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 9e-40; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 18536881 - 18536988
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||| ||||| |||||||||||| |||||||||||||||||||    
T  18536881 ttagagcacaatttacaatatacccattttcacatattatgaacatgcaatttcatctacagcaatttaattatcaccaaattcatgtactcaaacatat 18536980  T
Q  168 catcataa 175  Q
    ||||||||    
T  18536981 catcataa 18536988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 25595146 - 25595252
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||| ||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  25595146 ttagagtacaattcacaatatacc-attttcacatattatggacatgcaatttcatcaacaacaattcatttatcaccaaattcatgtactcaaacatat 25595244  T
Q  168 catcataa 175  Q
    ||||||||    
T  25595245 catcataa 25595252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 9636871 - 9636977
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||| ||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  9636871 ttagagcataattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatat 9636969  T
Q  168 catcataa 175  Q
    ||||||||    
T  9636970 catcataa 9636977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 72 - 177
Target Start/End: Complemental strand, 24087505 - 24087400
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    ||||||||||| |||||||||||||  |||||   |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  24087505 agcacaattcataatatacccatttatacataccatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtgctcaaacatatcatc 24087406  T
Q  172 ataatt 177  Q
    ||||||    
T  24087405 ataatt 24087400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 16292918 - 16292816
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    ||||||||| |||||||||| |||||| |||| | |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  16292918 agcacaattgacaatatacc-attttcgcatactatgaacatgcaatttcaccaacaacagttcaattatcaccaatttcatgtactcaaacatatcatc 16292820  T
Q  172 ataa 175  Q
    ||||    
T  16292819 ataa 16292816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 24277887 - 24277993
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| |||||||||||||||| |||||||| ||||||| ||||||||||    
T  24277887 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattgtcaccaatatcatgtattcaaacatat 24277985  T
Q  168 catcataa 175  Q
    ||||||||    
T  24277986 catcataa 24277993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 72 - 168
Target Start/End: Original strand, 20279540 - 20279636
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatc 168  Q
    |||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||    
T  20279540 agcacaattcacaatatacccatttatacatatcatgaacatgcaatttcatcaacaacaattcaattatcatcaaattcatatacccaaacatatc 20279636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 19660024 - 19660114
Alignment:
Q  87 atacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||||||||||||||||||||  | |||||||||||||||||    
T  19660024 atacccattttcacatactatgaacatgcaatttcaccaacaataattcaattatcaccaatttcatgtatacgaacatatcatcataatt 19660114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 24884812 - 24884917
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||| || |||||||||| | | ||||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||| | ||||||||||    
T  24884812 ttagagcataactcacaatatatc-actttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaattccatgcattcaaacatat 24884910  T
Q  168 catcata 174  Q
    |||||||    
T  24884911 catcata 24884917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 19666692 - 19666755
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||||||||| |||| ||| ||||||||||||||||||||||||||| | |||||||||||||    
T  19666692 tgaacatgcaaattcaccaaaaacaattcaattatcaccaatttcatgcattcaaacatatcat 19666755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 68156 - 68226
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  68156 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 68226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 38256247 - 38256320
Alignment:
Q  172 ataatttgcacggctagtgtggctggctttgttgctggatgtgcaggacatgattatacaacatccaaacatgg 245  Q
    ||||||||||| || ||||| ||||| ||||||| | ||||||||||||||||||||||| |||| ||||||||    
T  38256247 ataatttgcacagccagtgtagctggttttgttggtagatgtgcaggacatgattatacagcatcaaaacatgg 38256320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 19669191 - 19669125
Alignment:
Q  108 gaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||||| |  ||||||||||| ||||    
T  19669191 gaacatgcaatttcaccaacaacaactcaattatcatcaatttcatgcatacaaacatatcaccata 19669125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 722540 - 722625
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||| | ||| ||| |||||||| ||||||||| ||||||||||||||||||||  | |||||||||  |||||||||    
T  722540 cattttcatatactttgatcattcaatttcaccaacaacaaatcaattatcaccaatttcatacattcaaacataatatcataatt 722625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 43646059 - 43646127
Alignment:
Q  109 aacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||| ||||||| |||||||||| ||||||||| ||| |||||| | |||||||||||| |||||||    
T  43646059 aacatgaaatttcaccaacaacaatccaattatcaacaacttcatgcattcaaacatatcaacataatt 43646127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 6094842 - 6094896
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcat 123  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||||    
T  6094842 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcat 6094896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 22775288 - 22775218
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| | ||||| ||||||||||||||||| || ||| |||||| | ||||||||| ||||||||||    
T  22775288 tgaacatgaagtttcaccaacaacaattcaattaccaacaacttcatgcattcaaacataacatcataatt 22775218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 22780666 - 22780596
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| | ||||| ||||||||||||||||| || ||| |||||| | ||||||||| ||||||||||    
T  22780666 tgaacatgaagtttcaccaacaacaattcaattaccaacaacttcatgcattcaaacataacatcataatt 22780596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 31146246 - 31146194
Alignment:
Q  125 aacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  31146246 aacaacaattcaattatcaacaacttcatgcattcaaacataccatcataatt 31146194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 23821707 - 23821652
Alignment:
Q  122 atcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||||||||| ||| ||| || | ||||||||| ||||||||||    
T  23821707 atcaacaacaattcaattatcaacaacttcctgcattcaaacataacatcataatt 23821652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 23830786 - 23830731
Alignment:
Q  122 atcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||||||||| ||| ||| || | ||||||||| ||||||||||    
T  23830786 atcaacaacaattcaattatcaacaacttcctgcattcaaacataacatcataatt 23830731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 28031348 - 28031293
Alignment:
Q  88 tacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatca 143  Q
    |||||||||||||| ||| ||||||||  ||||||||| |||||||||| ||||||    
T  28031348 tacccattttcacacattatgaacatgttatttcatcaccaacaattcatttatca 28031293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 6094888 - 6094918
Alignment:
Q  145 caatttcatgtactcaaacatatcatcataa 175  Q
    |||||||||||||||||||||||||||||||    
T  6094888 caatttcatgtactcaaacatatcatcataa 6094918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 8616 - 8719
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||||||| |||||| | ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8616 ttagagcacaattcataatatatc-attttcacatactatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 8714  T
Q  168 catca 172  Q
    |||||    
T  8715 catca 8719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 7796 - 7690
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  7796 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtagtcaaacatat 7698  T
Q  168 catcataa 175  Q
    ||||||||    
T  7697 catcataa 7690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 81 - 175
Target Start/End: Complemental strand, 989 - 895
Alignment:
Q  81 cacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataa 175  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  989 cacaatacacccattttcacatattatgaacatgcaatttcatcaacaacaattcaattatcaccaaattcatttactcaaacatatcatcataa 895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 79; Significance: 9e-37; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 22125 - 22230
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||     
T  22125 ttagagcacaattcacaatatacc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatatactcaaacataa 22223  T
Q  168 catcata 174  Q
    |||||||    
T  22224 catcata 22230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 30090 - 30195
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||| ||||||||||||| | ||||||||||| | |||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  30090 ttagagcaaaattcacaatatatc-attttcacatactatgaacatgcaatttcacctacaacaattcaattatcaccaatttcatgtattcaaacatat 30188  T
Q  168 catcata 174  Q
    |||||||    
T  30189 catcata 30195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 1083 - 975
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||| ||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  1083 ttagagcacaattcccaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatat 985  T
Q  168 catcataatt 177  Q
    ||||||||||    
T  984 catcataatt 975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 3377 - 3483
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||| |||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  3377 ttagagcccaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatat 3475  T
Q  168 catcataa 175  Q
    ||||||||    
T  3476 catcataa 3483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 14162 - 14268
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||||| ||||||||||| | |||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||     
T  14162 ttagagcacaattcacaatatacc-attttcacatactatgaacatgcaatttcaccagcaataattcaattatcaccaatttcatgtactcaaacataa 14260  T
Q  168 catcataa 175  Q
    ||||||||    
T  14261 catcataa 14268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 68014 - 67912
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  68014 agcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcacgtactcaaacatatcatc 67916  T
Q  172 ataa 175  Q
    ||||    
T  67915 ataa 67912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 108135 - 108241
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||| |||||| |||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  108135 ttagagcataattcataatatacc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtactcaaacataa 108233  T
Q  168 catcataa 175  Q
    ||||||||    
T  108234 catcataa 108241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 13590195 - 13590089
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||||| |||||||||    
T  13590195 ttagagcacaattcacaatatatc-attttcacatattatgaacatgcagtttcatcaacatcaattgaattatcaccaatttcatgtacccaaacatat 13590097  T
Q  168 catcataa 175  Q
    ||||||||    
T  13590096 catcataa 13590089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 18238278 - 18238172
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||    
T  18238278 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatatcatgtattcaaacatat 18238180  T
Q  168 catcataa 175  Q
    ||||||||    
T  18238179 catcataa 18238172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 54398509 - 54398615
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||||||||||||||   ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54398509 ttagagcacaattcacaatatatt-attttcatatactatgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 54398607  T
Q  168 catcataa 175  Q
    || |||||    
T  54398608 caacataa 54398615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 13442797 - 13442691
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||| ||||||||||||| | ||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||     
T  13442797 ttagagcataattcacaatataac-attttcacatactatgaacatgcaatttcacaaacaacaattcaattatcaccaatttcatgtactcaaacataa 13442699  T
Q  168 catcataa 175  Q
    ||||||||    
T  13442698 catcataa 13442691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 47468469 - 47468363
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||||||||| |||| | ||||||||||| | ||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  47468469 ttagagcacaattcacactatatc-attttcacatactatgaacatacaatttcaccaacaacaattcaattatcatcaatttcatgtactcaaacatat 47468371  T
Q  168 catcataa 175  Q
    ||||||||    
T  47468370 catcataa 47468363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 50220061 - 50219959
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||||||| |||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  50220061 ttagagcacaattcaaaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcactaatttcatgtactcaaacatat 50219963  T
Q  168 catc 171  Q
    ||||    
T  50219962 catc 50219959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 40905032 - 40904949
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataa 175  Q
    |||||||||||| | |||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  40905032 cattttcacatactatgaacatgcaatttcaccaacaacaattcaattatcagcaatttcatgtattcaaacatatcatcataa 40904949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 7964795 - 7964725
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7964795 tgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatatcatcataatt 7964725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 41916847 - 41916741
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||| |||||||||| | || |||||||| | |||||||||||||||| |||||||||||  |||||||||||||| ||||| ||||||||||    
T  41916847 ttagagcacaactcacaatatatc-atcttcacatactatgaacatgcaatttcaccaacaacaattatattatcaccaattttatgtattcaaacatat 41916749  T
Q  168 catcataa 175  Q
    ||||||||    
T  41916748 catcataa 41916741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 38764838 - 38764943
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||||||||||||||||| | ||||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||||||  | |||||||||||      
T  38764838 gagcacaattcacaatataac-attttcacatactatgaacatgtaatttcaccaacaacaattcaattatcaccaatttcattcattcaaacatatccc 38764936  T
Q  171 cataatt 177  Q
    |||||||    
T  38764937 cataatt 38764943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 71 - 177
Target Start/End: Complemental strand, 41256487 - 41256383
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | || ||||| ||||    
T  41256487 gagcataattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattc-aacatttcat 41256390  T
Q  171 cataatt 177  Q
    |||||||    
T  41256389 cataatt 41256383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 7185942 - 7185857
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||| | ||||||| |||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||||||    
T  7185942 cattttcacatactatgaacatacaatttcaccaacaacaattcaattatcactaatttcatgcattcaaacatatcatcataatt 7185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 177
Target Start/End: Complemental strand, 15013400 - 15013296
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||  | ||||||||||| | |||||||||||||||| |||||||||||||||||||| |||||||||| | || ||||||||||    
T  15013400 gagcataattcacaatatgtc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattc-aacatatcat 15013303  T
Q  171 cataatt 177  Q
    |||||||    
T  15013302 cataatt 15013296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 18276598 - 18276665
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| | |||||||||||||||||    
T  18276598 tgaacatgcaatttcaccaacaacaatttaattatcaccaatttcatgcattcaaacatatcatcata 18276665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 47535148 - 47535078
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  47535148 tgaacttgaaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataatt 47535078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 168
Target Start/End: Original strand, 21417435 - 21417532
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatc 168  Q
    ||||||||||||||||||||  ||||  |||||| ||||||||| |||||||||| ||||||||||||||||| ||| ||||  || |||||||||||    
T  21417435 gagcacaattcacaatatacatatttatacatatcgtgaacatgaaatttcatcatcaacaattcaattatcaacaaattcacatattcaaacatatc 21417532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 13809609 - 13809523
Alignment:
Q  91 ccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| |||| | |||||||| ||| ||| ||||||||||||||||| || ||| |||||| | ||||||||||||||||||||    
T  13809609 ccattttctcatactttgaacatgaaatctcaccaacaacaattcaattaccaacaacttcatgcattcaaacatatcatcataatt 13809523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 15044992 - 15045062
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  15044992 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 15045062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 15109432 - 15109362
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  15109432 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 15109362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 19559487 - 19559585
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||| |||||||||  ||||||||| || | ||  ||||||||||||||||||| |||||||||||||| || ||| || |  | |||||||||||||    
T  19559487 gagcataattcacaaactacccatttacatacatcatgaacatgcaatttcatcatcaacaattcaattaacatcaaattaacatgctcaaacatatca 19559585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 41166029 - 41165959
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| |||||||  ||||||||||||||||||| ||| |||||| | ||||| |||| |||||||||    
T  41166029 tgaacatgaaatttcactaacaacaattcaattatcaacaacttcatgcattcaaatatattatcataatt 41165959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 52265573 - 52265521
Alignment:
Q  125 aacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  52265573 aacaacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 52265521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 49071851 - 49071913
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||||||||||||||||| ||| |||||||||| || ||| || |  |||||||||||||||    
T  49071851 tgaacatgcaatttcatcatcaataattcaattaacatcaaattaacatactcaaacatatca 49071913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 34177731 - 34177695
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatca 143  Q
    |||||||||||||| |||| |||||||||||||||||    
T  34177731 tgaacatgcaattttatcatcaacaattcaattatca 34177695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 4731 - 4839
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  4731 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatat 4829  T
Q  168 catcataatt 177  Q
    || |||||||    
T  4830 caccataatt 4839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 25476 - 25578
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||||||||||||||||| | ||||||||||| | |||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  25476 agcacaattcacaatatatc-attttcacatactatgaacaggcaatttcaccaacaacaattcaattttcaccaatttcatgtactcaaacatatcatc 25574  T
Q  172 ataa 175  Q
    ||||    
T  25575 ataa 25578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 27623 - 27729
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||| ||||||||||||||||| | ||||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  27623 ttagggcacaattcacaatatatc-attttcacatactatgaacatgaaatttcaccaacaacaattcaattatcaccaatttcatgtattcaaacatat 27721  T
Q  168 catcataa 175  Q
    ||||||||    
T  27722 catcataa 27729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 86483 - 86589
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | ||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  86483 ttagagcacaattcacaatataac-attttcacatactatgaacatccaatttcaccaacaaaaattcaattatcacaaatttcatgtactcaaacatat 86581  T
Q  168 catcataa 175  Q
    || |||||    
T  86582 caacataa 86589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 33535 - 33428
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||||| | |||||||| |||||| |||||| ||||||| |||||||||| ||| ||||| |||||||||||| |||||||||||||||||||    
T  33535 ttagagcacaatttataatatacctattttctcatattatgaacattcaatttcatctacatcaatttaattatcaccaaattcatgtactcaaacatat 33436  T
Q  168 catcataa 175  Q
    ||||||||    
T  33435 catcataa 33428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 85662 - 85766
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcat 170  Q
    ||||| ||||||||||||| | ||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||| | | |||||||||||    
T  85662 gagcataattcacaatatatc-attttcacatactatgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgca-ttaaacatatcat 85759  T
Q  171 cataatt 177  Q
    |||||||    
T  85760 cataatt 85766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 53499 - 53576
Alignment:
Q  96 ttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcat 173  Q
    |||||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  53499 ttcacatactttgaacatgcaatttcaccaacaacaattcaattatcaccaatatcatgcattcaaacatatcatcat 53576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 7532 - 7636
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||||||||||||||||| | ||||||||||| | |||  ||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  7532 agcacaattcacaatatatc-attttcacatactatgagaatgcaatttcaccaacaataattcaattatcactaatttcatgtattcaaacatatcatc 7630  T
Q  172 ataatt 177  Q
    ||||||    
T  7631 ataatt 7636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 16957 - 17061
Alignment:
Q  72 agcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatc 171  Q
    |||||||||||||||||| | ||||||||||| | |||  ||||||||||| |||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  16957 agcacaattcacaatatatc-attttcacatactatgagaatgcaatttcaccaacaataattcaattatcactaatttcatgtattcaaacatatcatc 17055  T
Q  172 ataatt 177  Q
    ||||||    
T  17056 ataatt 17061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 169
Target Start/End: Complemental strand, 12855 - 12754
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||| ||||||||||||||| |  |||||||| | |||||||||||    
T  12855 ttagagcacaattcacaacatatccattttaacatattatgaacatgcaatttcatcatcaacaattcaattatgaataatttcatatcctcaaacatat 12756  T
Q  168 ca 169  Q
    ||    
T  12755 ca 12754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 23793 - 23685
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||||||||||||||| | ||||||||||| | |||||||||||||||  ||||||||||||||||||||  |||||||||||  |||||||||    
T  23793 ttagagcacaattcacaatatatc-attttcacatactatgaacatgcaatttctccaacaacaattcaattatcaaaaatttcatgtatacaaacatat 23695  T
Q  168 catcataatt 177  Q
    || |||||||    
T  23694 caccataatt 23685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 43881 - 43811
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  43881 tgaacatgaaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatagcatcataatt 43811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 2689 - 2759
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  2689 tgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcatccaaacatatcatcataatt 2759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 97293 - 97211
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| | ||||||||||||| || ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  97293 tttcacatactttgaacatgcaattccaccaacaacaattcaattatcaccaattttatgcattcaaacatatcatcataatt 97211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 31172 - 31254
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| | |||||||||||||||| |||||||||| |||||||||||||||||||| | ||||| ||||||||||||||    
T  31172 tttcacatactatgaacatgcaatttcaccaacaacaatccaattatcaccaatttcatgcattcaaatatatcatcataatt 31254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 6693 - 6778
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||| |||||| | |||||||||| |||||||    
T  6693 cattttcacatactatgaacatgcaatttcaccaataacaattcaattatcaccaattccatgtatttaaacatatcaccataatt 6778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 169
Target Start/End: Original strand, 6011 - 6109
Alignment:
Q  71 gagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    |||||||||||||||  ||||||||| |  ||||  ||||||||||||||||||| ||||||||||||||||| |||||| |  |||||||||||||||    
T  6011 gagcacaattcacaaactacccatttacttatatcatgaacatgcaatttcatcatcaacaattcaattatcatcaatttaacatactcaaacatatca 6109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 76930 - 76860
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  76930 tgaacatgaaatttcaccaacaacaattcaattatcaacaatttcatgcattcaaacatatcatcataatt 76860  T

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Target: scaffold0006 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 197348 - 197266
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| | ||||| |||||||||| |||||||||||||||||||| |||||||||  | ||||||||||||||||||||    
T  197348 tttcacatactttgaacttgcaatttcaccaacaacaattcaattatcaacaatttcatacattcaaacatatcatcataatt 197266  T

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Target: scaffold0483 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 6825 - 6895
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | ||||||||||||||||||||    
T  6825 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataatt 6895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 1446 - 1364
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    |||||||||||| | ||| |||||||||||| |||||||||| |||||||||||||||| ||| |  ||||||||||||||||    
T  1446 cattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcata 1364  T

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Target: scaffold0409; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 9701 - 9619
Alignment:
Q  92 cattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    |||||||||||| | ||| |||||||||||| |||||||||| |||||||||||||||| ||| |  ||||||||||||||||    
T  9701 cattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcata 9619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 1349 - 1418
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||  ||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||    
T  1349 tgaacatgcaatttccccaacaacaactcaattatcactaatttcatgta-tcaaacatatcatcataatt 1418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 177
Target Start/End: Original strand, 69609 - 69691
Alignment:
Q  95 tttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||| | | |||||||||||||| | |||||||||||||||| |||||||||||| | | ||||||||||||||||||    
T  69609 tttcacatactttaaacatgcaatttcacctacaacaattcaattataaccaatttcatgcatttaaacatatcatcataatt 69691  T

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Target: scaffold0634 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 5595 - 5646
Alignment:
Q  126 acaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  5595 acaacaattcaattatcaccaatttcatgtattcaaacatatcaccataatt 5646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 22513 - 22438
Alignment:
Q  99 acatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||| ||||||||||| |||| ||||||||||| |||||||| |||||||||| |  ||||||||||||||||    
T  22513 acatattttgaacatgcaaattcaccaacaacaattaaattatcatcaatttcatgcatacaaacatatcatcata 22438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 8174 - 8241
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||||| |  ||||||||||||||||    
T  8174 tgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatatcatcata 8241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 11258 - 11328
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| |||||||  |||||||||||||||||||| | ||||||| | ||||||||||||||||||||    
T  11258 tgaacatgaaatttcacaaacaacaattcaattatcactagtttcatgcattcaaacatatcatcataatt 11328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 2399 - 2329
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||| ||||||| |||||||||||||||||||| ||| |||||| | ||||||||| ||||||||||    
T  2399 tgaacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacataacatcataatt 2329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 27051 - 27003
Alignment:
Q  129 acaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||    
T  27051 acaattcaattatcaccaatttcatgtattcaaacatatcaccataatt 27003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 270 - 332
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||||||||||||||||| ||||||||||||||||| ||| || |  |||||||||||||||    
T  270 tgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatactcaaacatatca 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 1592 - 1530
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||||||||||||||||| ||||||||||||||||| ||| || |  |||||||||||||||    
T  1592 tgaacatgcaatttcatcatcaacaattcaattatcatcaaattaacatactcaaacatatca 1530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 7108 - 7038
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||  |||||||  ||||||||||||||||||| ||| |||||| | ||||||||||||||||||||    
T  7108 tgaacattaaatttcactaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataatt 7038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 28700 - 28770
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    |||||||  ||||||| ||||||||||||| |||||| ||| |||||| | ||||||||||||||||||||    
T  28700 tgaacatataatttcaccaacaacaattcagttatcaacaagttcatgcattcaaacatatcatcataatt 28770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 79704 - 79770
Alignment:
Q  108 gaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||||||||| || |||||| |||||||||| |||||||||| |  ||||||||||||||||    
T  79704 gaacatgcaatttcaccaccaacaactcaattatcatcaatttcatgcatacaaacatatcatcata 79770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 1627 - 1562
Alignment:
Q  109 aacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    |||| |||| |||| ||||||||||||||||||||| ||||||||| |  ||||||||||||||||    
T  1627 aacaagcaaattcaccaacaacaattcaattatcactaatttcatgcatacaaacatatcatcata 1562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 8772 - 8707
Alignment:
Q  109 aacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    |||| |||| |||| ||||||||||||||||||||| ||||||||| |  ||||||||||||||||    
T  8772 aacaagcaaattcaccaacaacaattcaattatcactaatttcatgcatacaaacatatcatcata 8707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 12891 - 12976
Alignment:
Q  68 ttagagcacaattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcat 153  Q
    ||||||||||| ||| |||||||||||||  ||||||  |||||||||||||||||||  | |||||||| ||| | |||||||||    
T  12891 ttagagcacaaatcaaaatatacccatttatacatatcatgaacatgcaatttcatcattagcaattcaagtatgaacaatttcat 12976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 22512 - 22452
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    ||||||||||| |||| |||||||||||||||||||| |||||||||| |  |||||||||    
T  22512 tgaacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatat 22452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 104706 - 104639
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||| ||||| |||| |||||||||||||||||||| |||||| ||| |  ||||||||||||||||    
T  104706 tgaacctgcaaattcaccaacaacaattcaattatcatcaatttaatgcatacaaacatatcatcata 104639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 44205 - 44143
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatca 169  Q
    ||||||||||||||||||| |||||||||||||| || ||| || |  |||||||||||||||    
T  44205 tgaacatgcaatttcatcatcaacaattcaattaccatcaaattaacatactcaaacatatca 44143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 35642 - 35708
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcat 173  Q
    |||||||| |||||||  |||||||||||||||||||  || |||||| | ||||||||||||||||    
T  35642 tgaacatgaaatttcactaacaacaattcaattatcaataacttcatgcattcaaacatatcatcat 35708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 7161 - 7125
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatca 143  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  7161 tgaacatgcaaattcatcatcaacaattcaattatca 7125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 174
Target Start/End: Original strand, 10826 - 10893
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||||| |||  | ||||||| |||||||||| |||||||||| |  ||||||||||||||||    
T  10826 tgaacatgcaaattctccgacaacaactcaattatcatcaatttcatgcatacaaacatatcatcata 10893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 143
Target Start/End: Complemental strand, 34522 - 34467
Alignment:
Q  88 tacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatca 143  Q
    |||||||||||||| ||| ||||||||  ||||||||| |||||||||| ||||||    
T  34522 tacccattttcacacattatgaacatgttatttcatcaccaacaattcatttatca 34467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 70389 - 70323
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||||||| |||| |||||| |||| |||||||| |||||||||| |  ||||||||||||||||    
T  70389 tgaacatgcaaattca-caacaataattgaattatcatcaatttcatgcatacaaacatatcatcata 70323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 174
Target Start/End: Complemental strand, 89946 - 89880
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatatcatcata 174  Q
    ||||||| ||| |||| |||||||||||||| ||||| |||||||||| |  ||||||||||||||||    
T  89946 tgaacatacaaattca-caacaacaattcaagtatcatcaatttcatgcatacaaacatatcatcata 89880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 3962 - 3872
Alignment:
Q  77 aattcacaatatacccattttcacatattgtgaacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacatat 167  Q
    |||||||||  |||||||||  | ||||  |||||||||||||||||||  ||||||||||| |||| ||| || |  |||||||||||||    
T  3962 aattcacaaactacccatttatatatatcatgaacatgcaatttcatcattaacaattcaatcatcatcaaattaacatactcaaacatat 3872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 20016 - 19959
Alignment:
Q  109 aacatgcaatttcatcaacaacaattcaattatcaccaatttcatgtactcaaacata 166  Q
    |||||||||||||  || ||||||||||||||||| ||||||||  ||| ||||||||    
T  20016 aacatgcaatttccacatcaacaattcaattatcatcaatttcacatacccaaacata 19959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 12686 - 12650
Alignment:
Q  107 tgaacatgcaatttcatcaacaacaattcaattatca 143  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  12686 tgaacatgcaatttcatcatcaataattcaattatca 12650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 116619 - 116571
Alignment:
Q  129 acaattcaattatcaccaatttcatgtactcaaacatatcatcataatt 177  Q
    ||||||||||||||| ||||||||||   ||||||||| ||||||||||    
T  116619 acaattcaattatcaacaatttcatgccttcaaacataacatcataatt 116571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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