View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6594_high_55 (Length: 287)
Name: NF6594_high_55
Description: NF6594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6594_high_55 |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 14818989 - 14818723
Alignment:
| Q |
1 |
agtaatttttgttttatggtgtaaagtgtaacatcactatctcatcatggagtcccgcatgtctttcggtgtgaaatgacacgatccttacggcaggttc |
100 |
Q |
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| T |
14818989 |
agtaatttttgttttatggtgtaaagtgtaacatcactatctcatcatggagtcccgcatgtctttcggtgtgaaatgacacgatccttacggcaggttc |
14818890 |
T |
|
| Q |
101 |
attcaaaggacatgtatctcaattctcatcagctgcatcattcactttatttctcacaacaaaagccttcaacatatcaaggtaattatactattccacg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14818889 |
attcaaaggacatgtatctcaattctcatcagctgcatcattcactttatttctcacaacaaaagccttcaacatatcaaggtaattatactattccacg |
14818790 |
T |
|
| Q |
201 |
tcttccttcaaaaaatactattccaagtctatcttatagaagtatgttatg--tagatactgtcccc |
265 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |
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| T |
14818789 |
tcttccttcaaaaaatactattccaactctatcttatagaagtatgttatgtatagatactgtcccc |
14818723 |
T |
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