View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6594_high_58 (Length: 279)
Name: NF6594_high_58
Description: NF6594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6594_high_58 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 42296100 - 42295840
Alignment:
| Q |
1 |
taaagttttttgtaaatctcgtcagaaactaacaatcatgagaatgccccaacaataatccttaatagtccctcttagaaagtccttttgcttttacccc |
100 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42296100 |
taaagtttttcgtaaatctcgtcagaaactaacaatcatgagaatgccccaacaataatccttaatagtccctcttagaaagtccttttgcttttacccc |
42296001 |
T |
|
| Q |
101 |
tgcaacattgtgtcactccacatttaataatttaatgaaaaccggtgcattcatgatttattttggtctagaactgtttttcactagtacttcttttttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42296000 |
tgcaacattgtgtcactccacatttaataatttaatgaaaaccggtgcattcatgatttattttggtctagaactgtttttcactagtacttcttttttc |
42295901 |
T |
|
| Q |
201 |
ctgttcataaatgtttgtgatgtgcgcaagttattactcacggctagatgtataatttgca |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42295900 |
ctgttcataaatgtttgtgatgtgcgcaagttattactcacggctagatgtataatttgca |
42295840 |
T |
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