View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6594_high_79 (Length: 246)
Name: NF6594_high_79
Description: NF6594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6594_high_79 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 1457905 - 1458143
Alignment:
| Q |
18 |
attattgtataaggagcacttgaccaagaaagaaacaagtttctaaggttt------------gtgtttggaatatttaagagagaaatgcttttagtga |
105 |
Q |
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| T |
1457905 |
attattgtataaggagcacttgaccaagaaagaaacaagtttctaaggttttagtgatgtgatgtgtttggaatatttaagagagaaattcttttagtga |
1458004 |
T |
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| Q |
106 |
atccaggttcagaaggatgattacacattagtattttgtctttcaaccaaggctagttggtcaatcaccaacagaagacgccttaaaatttctaaagctg |
205 |
Q |
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| T |
1458005 |
atccaggttcagaaggatgattacacattagtattttgtctttcaaccgaggctagttggtcaatcaccaacagaagacgccttaaaatttctaaagctg |
1458104 |
T |
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| Q |
206 |
aaataatgcaatgaatcttacttgcatataagacaaaagcc |
246 |
Q |
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| T |
1458105 |
aaataatgcaatgaatcttacttgc--ataagacaaaagcc |
1458143 |
T |
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