View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6594_high_85 (Length: 240)
Name: NF6594_high_85
Description: NF6594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6594_high_85 |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 39237992 - 39237764
Alignment:
| Q |
1 |
cactcattaatgatgttttgtcatgggtacttttggccatagcaattgctatggcagagaatgaaagagttactttggcttctataatggttgtgttgtc |
100 |
Q |
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| T |
39237992 |
cactcattaatgatgttttgtcatgggtacttttggccatagcaattgctatggcagagaatgaaagagttactttggcttctataatggttgtgttgtc |
39237893 |
T |
|
| Q |
101 |
aagtgcagcatttgttgcttttaatgtttttgttgtaagaccaataatcatgtggataataaggaaaacaccagaaggcgaaacgtttagcgatttctat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39237892 |
aagtgcagcatttgttgcttttaatgtttttgttgtaagaccaataatcatgtggataataaggaaaacaccagaaggcgaaacgtttagcgatttctat |
39237793 |
T |
|
| Q |
201 |
atttgtttgatactagcaggtgtgatgat |
229 |
Q |
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||||||||||||||||||||||||||||| |
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|
| T |
39237792 |
atttgtttgatactagcaggtgtgatgat |
39237764 |
T |
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