View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6594_low_39 (Length: 381)
Name: NF6594_low_39
Description: NF6594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6594_low_39 |
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Alignment Details
Target: chr8 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 6 - 366
Target Start/End: Complemental strand, 7210126 - 7209766
Alignment:
| Q |
6 |
tgtccaagaatatcaatagatttacgaggaacaggttctctagcattagattttgacaaagaccttttcctaggatcttcattcacttgaacattagaaa |
105 |
Q |
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| T |
7210126 |
tgtccaaaagtatcaatagatttacgaggaacaggttctctagcattagattttgacaaagaccttttcctaggatcttcattcacttgaacattagaaa |
7210027 |
T |
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| Q |
106 |
ttgcactaccaacacccccaccaacactattttgcacactaggactcatagtcaaattaagagattgaaaaccatttccatcactagaagttgttttccc |
205 |
Q |
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| T |
7210026 |
ttgcactaccaacacccccaccaacaccattttgcacacaaggactcatagtcaaattaagagattgaaaaccatttccatcactagaagttgttttccc |
7209927 |
T |
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| Q |
206 |
ctcagaagaaaactgagtttgagtcatccaagatttatacatgctattatcatggattaaagcatgatgattgttgttgctgtgatcattatatgcatga |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7209926 |
ctcagaagaaaactgagtttgagtcatccaagatttatacatgctattatcatggattaaagcatgatgattgttgttgctgtgatcattatatgcatga |
7209827 |
T |
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| Q |
306 |
aaagagtgaatcaaagattggtttgttagattcttccttgtgtcaatctctggattattat |
366 |
Q |
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| T |
7209826 |
aaagagtgaatcaaagattggtttgttagattctcccttgtgtcaatctctggattattat |
7209766 |
T |
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