View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6594_low_69 (Length: 267)

Name: NF6594_low_69
Description: NF6594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6594_low_69
NF6594_low_69
[»] chr3 (33 HSPs)
chr3 (6-152)||(34897794-34897940)
chr3 (130-267)||(1995436-1995573)
chr3 (147-267)||(27033643-27033763)
chr3 (141-215)||(52859272-52859346)
chr3 (186-267)||(2229975-2230056)
chr3 (147-263)||(19830394-19830510)
chr3 (147-267)||(43719910-43720030)
chr3 (148-267)||(44637934-44638052)
chr3 (145-267)||(10474400-10474521)
chr3 (182-267)||(31523666-31523751)
chr3 (186-267)||(34373823-34373904)
chr3 (147-267)||(29586328-29586447)
chr3 (140-267)||(48084811-48084939)
chr3 (192-267)||(34373593-34373668)
chr3 (181-264)||(54911649-54911732)
chr3 (182-267)||(33632815-33632899)
chr3 (182-267)||(42613072-42613157)
chr3 (182-267)||(49679268-49679353)
chr3 (186-267)||(46167385-46167466)
chr3 (147-264)||(51982549-51982665)
chr3 (147-243)||(24754673-24754769)
chr3 (147-243)||(24763670-24763766)
chr3 (221-267)||(34897937-34897983)
chr3 (182-267)||(550814-550899)
chr3 (190-267)||(25285843-25285920)
chr3 (152-259)||(47750274-47750380)
chr3 (182-267)||(40810353-40810439)
chr3 (145-214)||(30235416-30235484)
chr3 (147-252)||(40851781-40851886)
chr3 (233-267)||(27959099-27959133)
chr3 (234-267)||(3009231-3009264)
chr3 (186-267)||(12402958-12403039)
chr3 (183-263)||(47914166-47914246)
[»] chr1 (31 HSPs)
chr1 (139-267)||(39426202-39426330)
chr1 (138-259)||(32887735-32887855)
chr1 (143-267)||(26860010-26860133)
chr1 (147-267)||(26372244-26372362)
chr1 (141-227)||(35534741-35534825)
chr1 (186-267)||(12151759-12151840)
chr1 (147-267)||(50294026-50294146)
chr1 (182-259)||(5047379-5047456)
chr1 (182-267)||(30077642-30077727)
chr1 (147-267)||(32618793-32618911)
chr1 (147-267)||(50484378-50484498)
chr1 (140-260)||(18976260-18976381)
chr1 (182-267)||(52280037-52280122)
chr1 (181-267)||(24977232-24977318)
chr1 (186-243)||(7840681-7840738)
chr1 (136-259)||(5854799-5854921)
chr1 (193-259)||(24413291-24413357)
chr1 (217-267)||(46608410-46608460)
chr1 (198-267)||(12380924-12380993)
chr1 (198-267)||(12384991-12385060)
chr1 (186-267)||(48327156-48327236)
chr1 (147-267)||(40328270-40328387)
chr1 (217-267)||(26768887-26768937)
chr1 (217-267)||(44483759-44483809)
chr1 (148-202)||(49384627-49384680)
chr1 (218-267)||(39425970-39426019)
chr1 (140-204)||(1228496-1228560)
chr1 (138-214)||(12380831-12380907)
chr1 (138-214)||(12384898-12384974)
chr1 (139-239)||(27982072-27982171)
chr1 (147-223)||(45978041-45978117)
[»] chr6 (23 HSPs)
chr6 (139-267)||(2800566-2800694)
chr6 (139-267)||(7215807-7215935)
chr6 (138-267)||(4804440-4804569)
chr6 (147-267)||(7162076-7162196)
chr6 (147-267)||(21159332-21159452)
chr6 (182-267)||(24484871-24484956)
chr6 (147-267)||(17944154-17944274)
chr6 (189-267)||(27826530-27826608)
chr6 (186-267)||(12412629-12412710)
chr6 (147-267)||(17828532-17828651)
chr6 (149-260)||(23936252-23936365)
chr6 (147-263)||(227526-227643)
chr6 (182-267)||(2142291-2142376)
chr6 (186-267)||(13089751-13089832)
chr6 (182-264)||(13888520-13888603)
chr6 (184-267)||(32254031-32254114)
chr6 (186-267)||(1249150-1249229)
chr6 (206-267)||(29698155-29698216)
chr6 (140-182)||(9952993-9953035)
chr6 (221-259)||(2720373-2720411)
chr6 (182-251)||(7545645-7545715)
chr6 (190-228)||(9954332-9954370)
chr6 (148-204)||(29229149-29229204)
[»] chr2 (35 HSPs)
chr2 (141-267)||(30709102-30709228)
chr2 (140-267)||(4446852-4446979)
chr2 (138-262)||(19908777-19908899)
chr2 (139-267)||(31618724-31618850)
chr2 (147-267)||(35316817-35316937)
chr2 (140-215)||(30217517-30217592)
chr2 (190-267)||(28564884-28564961)
chr2 (147-267)||(13238673-13238793)
chr2 (183-267)||(21454494-21454577)
chr2 (164-267)||(36929708-36929810)
chr2 (164-262)||(15709765-15709862)
chr2 (181-267)||(34512022-34512108)
chr2 (182-267)||(374985-375070)
chr2 (182-267)||(8988847-8988932)
chr2 (143-259)||(30857638-30857753)
chr2 (186-267)||(23259489-23259570)
chr2 (182-267)||(23459844-23459929)
chr2 (182-267)||(35315286-35315371)
chr2 (182-267)||(38397073-38397158)
chr2 (140-267)||(2063345-2063472)
chr2 (139-209)||(30721564-30721632)
chr2 (147-267)||(36758825-36758944)
chr2 (164-267)||(15722226-15722328)
chr2 (140-267)||(35315494-35315620)
chr2 (147-213)||(22061433-22061498)
chr2 (182-267)||(29188645-29188731)
chr2 (189-262)||(4603114-4603187)
chr2 (182-251)||(19905889-19905958)
chr2 (184-267)||(30803312-30803395)
chr2 (181-259)||(38260294-38260370)
chr2 (233-267)||(3354812-3354846)
chr2 (237-267)||(30217482-30217512)
chr2 (141-190)||(6946335-6946384)
chr2 (194-262)||(26800321-26800389)
chr2 (196-260)||(41072961-41073025)
[»] chr8 (31 HSPs)
chr8 (141-267)||(42761705-42761831)
chr8 (182-267)||(26749546-26749631)
chr8 (186-267)||(30426671-30426752)
chr8 (138-267)||(21360268-21360400)
chr8 (164-267)||(24557162-24557264)
chr8 (147-267)||(28069711-28069831)
chr8 (147-267)||(36991348-36991468)
chr8 (164-262)||(18689488-18689585)
chr8 (147-267)||(6014186-6014307)
chr8 (145-262)||(42338008-42338124)
chr8 (184-259)||(36748492-36748566)
chr8 (186-267)||(40695249-40695330)
chr8 (191-263)||(10672519-10672591)
chr8 (140-267)||(45113262-45113390)
chr8 (182-267)||(1937152-1937238)
chr8 (221-267)||(6148997-6149043)
chr8 (138-267)||(10652571-10652701)
chr8 (182-260)||(17520381-17520459)
chr8 (183-261)||(34612562-34612640)
chr8 (206-267)||(28318924-28318985)
chr8 (186-267)||(41511254-41511335)
chr8 (192-267)||(6399916-6399991)
chr8 (137-267)||(37966397-37966525)
chr8 (182-267)||(3763520-3763605)
chr8 (230-267)||(30796270-30796307)
chr8 (206-267)||(44859189-44859250)
chr8 (136-202)||(20169125-20169190)
chr8 (190-256)||(24102019-24102085)
chr8 (226-267)||(24241567-24241608)
chr8 (189-257)||(21486925-21486993)
chr8 (235-267)||(24241673-24241705)
[»] chr5 (34 HSPs)
chr5 (147-255)||(29340999-29341106)
chr5 (147-267)||(35660572-35660692)
chr5 (148-267)||(4895699-4895818)
chr5 (147-267)||(11775785-11775905)
chr5 (147-267)||(32129580-32129700)
chr5 (186-267)||(14349795-14349876)
chr5 (147-267)||(18625384-18625504)
chr5 (147-267)||(37266723-37266843)
chr5 (182-267)||(10362012-10362097)
chr5 (182-267)||(36290594-36290679)
chr5 (186-267)||(40753164-40753245)
chr5 (147-259)||(43309108-43309220)
chr5 (164-267)||(34827184-34827287)
chr5 (149-267)||(39902407-39902525)
chr5 (183-267)||(2984389-2984473)
chr5 (147-267)||(13032110-13032230)
chr5 (182-262)||(31653032-31653112)
chr5 (182-267)||(3057152-3057237)
chr5 (182-267)||(18653353-18653438)
chr5 (182-265)||(41660100-41660183)
chr5 (201-267)||(4592792-4592858)
chr5 (190-267)||(14688566-14688643)
chr5 (183-259)||(31279914-31279990)
chr5 (140-267)||(3057408-3057534)
chr5 (192-259)||(43222126-43222193)
chr5 (145-211)||(9460597-9460662)
chr5 (182-252)||(27428879-27428949)
chr5 (221-267)||(28142812-28142858)
chr5 (182-267)||(31546478-31546563)
chr5 (183-267)||(17247398-17247482)
chr5 (181-260)||(38283776-38283855)
chr5 (217-267)||(3041341-3041391)
chr5 (140-174)||(21213953-21213987)
chr5 (194-267)||(8440981-8441054)
[»] chr4 (47 HSPs)
chr4 (147-267)||(19901881-19902001)
chr4 (142-267)||(36532618-36532741)
chr4 (147-267)||(5416429-5416548)
chr4 (147-267)||(23610634-23610754)
chr4 (140-267)||(56453777-56453903)
chr4 (138-267)||(56558271-56558400)
chr4 (144-267)||(42844148-42844270)
chr4 (181-267)||(5763159-5763245)
chr4 (143-259)||(1871277-1871392)
chr4 (147-267)||(3952133-3952253)
chr4 (147-267)||(34778413-34778533)
chr4 (182-261)||(56269074-56269153)
chr4 (182-267)||(5524439-5524524)
chr4 (148-267)||(5815267-5815383)
chr4 (182-262)||(48914516-48914596)
chr4 (139-260)||(15178628-15178738)
chr4 (142-267)||(47922324-47922450)
chr4 (182-267)||(23474103-23474188)
chr4 (190-267)||(30567893-30567970)
chr4 (147-263)||(18207003-18207119)
chr4 (147-267)||(39862509-39862629)
chr4 (186-256)||(24073619-24073689)
chr4 (189-267)||(33262557-33262635)
chr4 (182-260)||(36688186-36688264)
chr4 (182-267)||(37002249-37002334)
chr4 (182-267)||(42010109-42010194)
chr4 (147-266)||(12312438-12312558)
chr4 (147-267)||(33247093-33247213)
chr4 (219-267)||(46804623-46804671)
chr4 (182-261)||(1015852-1015931)
chr4 (182-257)||(50483554-50483629)
chr4 (217-267)||(12241441-12241491)
chr4 (221-267)||(31862257-31862303)
chr4 (189-267)||(38079725-38079803)
chr4 (145-255)||(13493276-13493387)
chr4 (145-210)||(33841766-33841830)
chr4 (184-267)||(37337091-37337174)
chr4 (217-267)||(48084558-48084608)
chr4 (141-267)||(4404282-4404409)
chr4 (216-267)||(3326509-3326560)
chr4 (190-260)||(34927484-34927555)
chr4 (233-267)||(5361435-5361469)
chr4 (233-267)||(47834573-47834607)
chr4 (181-218)||(5817976-5818013)
chr4 (153-238)||(36003216-36003300)
chr4 (217-261)||(17080811-17080855)
chr4 (229-261)||(52552772-52552804)
[»] chr7 (37 HSPs)
chr7 (147-262)||(4888464-4888579)
chr7 (182-267)||(47799898-47799983)
chr7 (142-261)||(40023215-40023333)
chr7 (186-267)||(12139318-12139400)
chr7 (186-267)||(25084730-25084811)
chr7 (139-267)||(33450498-33450627)
chr7 (140-229)||(47270580-47270668)
chr7 (147-267)||(9559017-9559137)
chr7 (140-267)||(39855770-39855896)
chr7 (151-267)||(7362560-7362676)
chr7 (147-267)||(7712331-7712450)
chr7 (147-267)||(16366510-16366630)
chr7 (147-267)||(21151144-21151264)
chr7 (148-259)||(989129-989239)
chr7 (182-261)||(32915954-32916033)
chr7 (138-267)||(47500236-47500366)
chr7 (182-263)||(8149605-8149686)
chr7 (182-267)||(30588527-30588612)
chr7 (186-267)||(45260429-45260510)
chr7 (148-267)||(29631040-29631156)
chr7 (178-234)||(29844316-29844372)
chr7 (140-259)||(7373867-7373985)
chr7 (184-267)||(24193585-24193668)
chr7 (152-267)||(38365647-38365761)
chr7 (147-263)||(44647958-44648076)
chr7 (138-267)||(18198248-18198377)
chr7 (182-267)||(19889032-19889117)
chr7 (147-267)||(47226039-47226157)
chr7 (220-267)||(11828945-11828992)
chr7 (184-259)||(46802331-46802406)
chr7 (182-267)||(34985943-34986029)
chr7 (147-215)||(5463867-5463934)
chr7 (181-251)||(19027680-19027751)
chr7 (181-251)||(20726885-20726956)
chr7 (145-259)||(30153144-30153257)
chr7 (136-202)||(44390835-44390900)
chr7 (169-226)||(18064588-18064643)
[»] scaffold0012 (1 HSPs)
scaffold0012 (147-267)||(208055-208175)
[»] scaffold0062 (2 HSPs)
scaffold0062 (164-262)||(58677-58774)
scaffold0062 (164-267)||(70783-70885)
[»] scaffold0250 (1 HSPs)
scaffold0250 (186-267)||(7139-7220)
[»] scaffold0121 (1 HSPs)
scaffold0121 (182-267)||(29567-29652)
[»] scaffold0171 (1 HSPs)
scaffold0171 (189-267)||(17311-17389)
[»] scaffold0035 (1 HSPs)
scaffold0035 (186-267)||(16399-16480)
[»] scaffold0126 (1 HSPs)
scaffold0126 (192-267)||(22450-22525)
[»] scaffold0008 (1 HSPs)
scaffold0008 (186-256)||(9203-9273)
[»] scaffold0009 (1 HSPs)
scaffold0009 (186-267)||(6437-6518)


Alignment Details
Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 6 - 152
Target Start/End: Original strand, 34897794 - 34897940
Alignment:
Q  6 tggacatcatcaataccgttttgttcggtagaactataattttgatacaaatagaaaatatcattgtaaaaactgttttgtttttggagaatttgttgga 105  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  34897794 tggacatcttcaataccgttttgttcggtagaactataattttgatacaaatagaaaatatcattgtaaaaactgttttgtttttggagaatttgtcgga 34897893  T
Q  106 atccaagtcaacatgtaatagaggtgggtgagaggggttaggatcct 152  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34897894 atccaagtcaacatgtaattgaggtgggtgagaggggttaggatcct 34897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 130 - 267
Target Start/End: Complemental strand, 1995573 - 1995436
Alignment:
Q  130 tgggtgagaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 229  Q
    ||||||| | ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| | ||||||||||||| |||||||||     
T  1995573 tgggtgacatgggttaggatcctcttcattttatcaaataaatggaagtacacaatttgaagagagatagacatagaaaatagataatgagtcctaccaa 1995474  T
Q  230 taagtgggtcccactatcattaattattttttactttt 267  Q
    |||||| ||| ||| |||||||||||||||||||||||    
T  1995473 taagtgagtctcaccatcattaattattttttactttt 1995436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 27033763 - 27033643
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||||| ||||||| |||||| ||    
T  27033763 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtggatcccaccat 27033664  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  27033663 cattaattatattttactttt 27033643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 52859346 - 52859272
Alignment:
Q  141 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 215  Q
    ||||| |||||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||    
T  52859346 ggttatgatcctctccatttgataaaataaatgaaaatacacaatttagagagagatagacacataaaatagata 52859272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 2230056 - 2229975
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||| | |||| |||||||||||| ||||||||||    
T  2230056 ttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtttccaccatcattaattatattttactttt 2229975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 19830394 - 19830510
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||| |||| ||||||||| |||||||||  ||||||||||||||||||||||||||| ||    
T  19830394 gatcctctccatttggcaaaataaatggagttttgcaagttggggagaaatagacacaaaaaatagatggtgggtcctaccattaagtgggtcccaccat 19830493  T
Q  247 cattaattattttttac 263  Q
    |||||||||| ||||||    
T  19830494 cattaattatattttac 19830510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 43719910 - 43720030
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||| | ||||||||||||  |   ||| ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||| ||    
T  43719910 gatcctctccatttaacaaaataaatggagttttgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggtcccaccat 43720009  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||| ||||    
T  43720010 cattaattatattttattttt 43720030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 44638052 - 44637934
Alignment:
Q  148 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 247  Q
    |||||| |||||||| |||||||||||| |||  |||||| |||||||||| |||||||||||||||| |||  ||||| ||||||| ||||| ||| ||    
T  44638052 atcctcatcatttgacaaaataaatgga-gtatgcaattttgagagagataaacacataaaatagatagtggaccctactattaagtaggtcctactgtc 44637954  T
Q  248 attaattattttttactttt 267  Q
    |||| |||||||||| ||||    
T  44637953 attagttattttttattttt 44637934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 267
Target Start/End: Original strand, 10474400 - 10474521
Alignment:
Q  145 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 244  Q
    ||||||||||  |||||| | |||||||||| |||  |||||| |||||| |||||||||||||||||||||||| |||||| |||||||| || ||||     
T  10474400 aggatcctctctatttgacataataaatgga-gtatgcaattttgagagatatagacacataaaatagataatggatcctactattaagtgagttccacc 10474498  T
Q  245 atcattaattattttttactttt 267  Q
    | ||||||||| |||||| ||||    
T  10474499 aacattaattactttttagtttt 10474521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 31523666 - 31523751
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||||||||||||||||||    
T  31523666 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattattttttactttt 31523751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 34373904 - 34373823
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| |||||||||  |||||||||||| ||| | |||||||| |||||||||||| ||||||||||    
T  34373904 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaattaggtcccaccatcattaattatattttactttt 34373823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 29586447 - 29586328
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    ||||||||||||||   | |||||||||| |||  || ||||||||||||||||||||||||||||||| |  ||| ||| |||||||||||| ||| ||    
T  29586447 gatcctcttcatttagcataataaatgga-gtatgcagtttggagagagatagacacataaaatagatagtaagtcttactattaagtgggtctcaccat 29586349  T
Q  247 cattaattattttttactttt 267  Q
    ||||||||| |||||| ||||    
T  29586348 cattaattactttttagtttt 29586328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 267
Target Start/End: Complemental strand, 48084939 - 48084811
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 238  Q
    |||||| |||||||| |||||| |||||||||| ||  |   |||||||| |||||||||||||| || |||||||  ||||||| |||| |||||||||    
T  48084939 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggggagagatagacacaaaagaatagatggtgggtccaaccactaagtgggt 48084840  T
Q  239 cccactatcattaattattttttactttt 267  Q
    ||||  |||||||||||||||||| ||||    
T  48084839 cccatcatcattaattattttttattttt 48084811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 34373593 - 34373668
Alignment:
Q  192 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||  |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  34373593 agagatagacactaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 34373668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 54911732 - 54911649
Alignment:
Q  181 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttact 264  Q
    |||||||| ||||||||||| ||||||||||| || |||||||||||||||| || || |||| ||||||||||| ||||||||    
T  54911732 acaatttgaagagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatcattaattaatttttact 54911649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 33632899 - 33632815
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||| ||| | |||| ||||||||||| |||||| ||||    
T  33632899 caatttggagagagatagacacataaaatagatagtggatcctactattaaatggattccac-atcattaattactttttagtttt 33632815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 42613157 - 42613072
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||| ||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  42613157 caatttgaagagagatagacaaaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattattttttactttt 42613072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 49679268 - 49679353
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||||||||||||||    
T  49679268 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttactttt 49679353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 46167466 - 46167385
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| ||||||| ||| || || ||||||||| ||||||||||    
T  46167466 ttggagagagatagacacaaaaaatatatggtgggtcctaccactaagtggatcctaccattattaattatattttactttt 46167385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 51982549 - 51982665
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| |||||   |||||||||||||| |  ||||||||||||||||||| ||||||||||| || ||||| ||| ||||||||| || | |  ||    
T  51982549 gatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagatacataaaatagttagtgggttctatcattaagtgagttctatcat 51982647  T
Q  247 cattaattattttttact 264  Q
    ||||||||| ||||||||    
T  51982648 cattaattactttttact 51982665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 24754769 - 24754673
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 243  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24754769 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24754673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 24763766 - 24763670
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 243  Q
    |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |  ||||||||| ||||||||||||||    
T  24763766 gatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacacaaaatagatggtatgtcctaccactaagtgggtcccac 24763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 34897937 - 34897983
Alignment:
Q  221 tcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  34897937 tcctaccattaaatgggttccactatcattaattattttttactttt 34897983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 550814 - 550899
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||| ||||| | ||| |||||||||  ||| ||||| ||||||||||||||||| || |||| |||| ||||||||||    
T  550814 caatttggagaaagatatatacaaaaaatagatggtggatcctatcattaagtgggtcccaccattattatttatattttactttt 550899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 267
Target Start/End: Original strand, 25285843 - 25285920
Alignment:
Q  190 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||||||||||||||||| ||| ||||| |||||| || | ||||| ||||| |||| ||||| ||||||    
T  25285843 agagagatagacacataaaatagatagtggatcctatcattaaatgagacccaccatcatcaattttttttgactttt 25285920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 259
Target Start/End: Original strand, 47750274 - 47750380
Alignment:
Q  152 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 251  Q
    ||||||||||| |||||||||| | ||| |||||||| ||||| ||| ||||| ||||||||||| | ||| || ||||||||| |||| || || ||||    
T  47750274 tcttcatttgacaaaataaatg-aggtatacaatttgaagagacataaacacaaaaaatagataaagagtcttatcattaagtgagtcctaccattatta 47750372  T
Q  252 attatttt 259  Q
    | ||||||    
T  47750373 aatatttt 47750380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 40810353 - 40810439
Alignment:
Q  182 caatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||| ||| | || |||||||  ||||||  |||| |||||||||||||  |||||||||||||||||| ||||    
T  40810353 caatttggagagagataaacaaaaaagaatagatggtgggtctaaccactaagtgggtcccatcatcattaattattttttattttt 40810439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 30235416 - 30235484
Alignment:
Q  145 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 214  Q
    |||||| |||||||||| |||||||||||| ||||  ||||||| ||||||||||||| | |||||||||    
T  30235416 aggatcatcttcatttgttaaaataaatgg-agtatgcaatttgaagagagatagacataaaaaatagat 30235484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 40851886 - 40851781
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    ||||||||  |||||| ||||||||||||  |   ||| ||||||| ||||||||||| |||||||||  ||||| | |||| ||||||||||| || ||    
T  40851886 gatcctctcaatttgacaaaataaatggagttttgcaagttggagaaagatagacacaaaaaatagatggtgggttcaaccactaagtgggtcctaccat 40851787  T
Q  247 cattaa 252  Q
    ||||||    
T  40851786 cattaa 40851781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 267
Target Start/End: Complemental strand, 27959133 - 27959099
Alignment:
Q  233 gtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||| |||||||||||||||||||||||    
T  27959133 gtgggtcccaccatcattaattattttttactttt 27959099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 267
Target Start/End: Complemental strand, 3009264 - 3009231
Alignment:
Q  234 tgggtcccactatcattaattattttttactttt 267  Q
    |||||||||| |||||||||||||||||||||||    
T  3009264 tgggtcccaccatcattaattattttttactttt 3009231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 12403039 - 12402958
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||| | | ||| |||||  ||| | |||||| |||||| ||||||| || ||||||||| ||||||||||    
T  12403039 ttggagagagatagatataaaaattagatggtggattctaccactaagtgagtcccaccattattaattatattttactttt 12402958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 47914166 - 47914246
Alignment:
Q  183 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 263  Q
    ||||| ||||| |||| | ||||||||||| || | | |||||  |||||||| ||||||| ||||||||||| |||||||    
T  47914166 aatttagagagtgatatagacataaaataggtagtagatcctattattaagtgagtcccaccatcattaattactttttac 47914246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 39426330 - 39426202
Alignment:
Q  139 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 238  Q
    |||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  39426330 ggggttagtatcatctccatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 39426231  T
Q  239 cccactatcattaattattttttactttt 267  Q
    |||||||||||||||||||||||||||||    
T  39426230 cccactatcattaattattttttactttt 39426202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 32887735 - 32887855
Alignment:
Q  138 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 237  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||| ||| ||| |||||||||||| ||||    
T  32887735 agggattaggatcctcttcatttgataaaataaatgga-gtacacagtttagagaaagatagacacataaaataaatagtggatcctaccattaaatggg 32887833  T
Q  238 tcccactatcattaattatttt 259  Q
    |||||| |||||||||||||||    
T  32887834 tcccaccatcattaattatttt 32887855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 26860010 - 26860133
Alignment:
Q  143 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 242  Q
    |||||||| |||  ||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| | ||||||| || ||||||| |||||    
T  26860010 ttaggatcatctctatttgataaaataaatgga-gtacataatttgaagagagatagacacataaaatagatagtaggtcctatcactaagtggatccca 26860108  T
Q  243 ctatcattaattattttttactttt 267  Q
    | |||||||||||||||||||||||    
T  26860109 caatcattaattattttttactttt 26860133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 26372362 - 26372244
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    ||||||||  ||||||||||||||||||||||| | |||||  |||||||||||||| ||||||||| ||| | ||||||||||||||||||||||| |     
T  26372362 gatcctctcaatttgataaaataaatggaagtagataattt--agagagatagacacgtaaaatagacaatagatcctaccattaagtgggtcccaccac 26372265  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||||||||||||||    
T  26372264 cattaattattttttactttt 26372244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 35534741 - 35534825
Alignment:
Q  141 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctacc 227  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||    
T  35534741 ggttagtatcctctccatttgataaaataaatggaagtacacaattt--agagagatagacacataaaatagatagtggatcctacc 35534825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 12151840 - 12151759
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  12151840 ttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 12151759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 50294026 - 50294146
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||||||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||| ||| || ||    
T  50294026 gatcctcttcatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggatcctaccat 50294125  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||| ||||    
T  50294126 cattaattatattttattttt 50294146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 5047379 - 5047456
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 259  Q
    |||||||||||||||| ||  ||||||||||||||||| |||||||| || ||||||||||| |||||||||||||||    
T  5047379 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggtcccaccatcattaattatttt 5047456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 30077642 - 30077727
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||||  |  ||||| ||| || |||||| |||||||||||||||||||||||||||||||    
T  30077642 caatttggagagagatagacacaaaaaataagtggtgggttctatcactaagtgagtcccactatcattaattattttttactttt 30077727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 32618911 - 32618793
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||||||||||  | |||||||||| |||  |||||||||||||||| |||| ||||| |||||| ||| |||||| ||||||| |||||||| ||    
T  32618911 gatcctcttcatttggcataataaatgga-gtatccaatttggagagagatggacatataaa-tagatagtggatcctactattaagtaggtcccaccat 32618814  T
Q  247 cattaattattttttactttt 267  Q
    ||||||||| |||||| ||||    
T  32618813 cattaattactttttagtttt 32618793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 50484498 - 50484378
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||| | |||| ||||||||||||||  |    
T  50484498 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtcccaccgt 50484399  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  50484398 cattaattatattttactttt 50484378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 18976260 - 18976381
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 238  Q
    |||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||| ||| |||||||||| |||    
T  18976260 gggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtggatccaaccattaagtaggt 18976359  T
Q  239 cccactatcattaattattttt 260  Q
    ||||  ||||||||||||||||    
T  18976360 cccatcatcattaattattttt 18976381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 52280037 - 52280122
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| |||||| |||||||||||||||||||||||    
T  52280037 caatttggagagagatagacataaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattattttttactttt 52280122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 24977318 - 24977232
Alignment:
Q  181 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||| |||||||||||||||| |||||||||  ||| |||||||| ||||||||| |||| ||||||| |||| ||||| ||||    
T  24977318 acaatttagagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcattagttatattttattttt 24977232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 7840681 - 7840738
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 243  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||    
T  7840681 ttggagagagatagacacaagaaatagatgatgggtcctaccattaagcgggtcccac 7840738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 259
Target Start/End: Original strand, 5854799 - 5854921
Alignment:
Q  136 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtg 235  Q
    |||||||||| |||||||| ||||||| | |||||||||| ||| |||||||| | ||||||||||| | ||| | || | ||| ||||||||| || ||    
T  5854799 agaggggttatgatcctctacatttgaaagaataaatgga-gtatacaatttgaaaagagatagacataaaaatttgagagtggatcctaccataaaatg 5854897  T
Q  236 ggtcccactatcattaattatttt 259  Q
    | |||||  |||||||||||||||    
T  5854898 gatcccatcatcattaattatttt 5854921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 24413291 - 24413357
Alignment:
Q  193 gagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 259  Q
    |||||||||||| ||||| |||  ||||||||| |||||| |||||||||| |||||||||||||||    
T  24413291 gagatagacacaaaaaatggatggtgggtcctatcattaaatgggtcccaccatcattaattatttt 24413357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 46608410 - 46608460
Alignment:
Q  217 tgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  46608410 tgggtcctaccactaagtgggacccaccatcattaattattttttactttt 46608460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 12380924 - 12380993
Alignment:
Q  198 agacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||| |||||||||  ||||| |||||| |||||| ||||||| |||||||||||| ||||||||||    
T  12380924 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttactttt 12380993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 12384991 - 12385060
Alignment:
Q  198 agacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||| |||||||||  ||||| |||||| |||||| ||||||| |||||||||||| ||||||||||    
T  12384991 agacacaaaaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttactttt 12385060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 48327156 - 48327236
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||| | |||||||||  || ||||||||| ||||||||| |||| |||||||||||| ||||| ||||    
T  48327156 ttggagagagatagacaaaaaaaatagatggtgagtcctaccactaagtgggt-ccaccatcattaattatattttattttt 48327236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 40328387 - 40328270
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||  |||||||||||||| |||||||||  ||||||| |||| ||||||||| |||| ||    
T  40328387 gatcctctccatttggcaaaataaatggagttttgcaaattg--gagagatagacaca-aaaatagatggtgggtcccaccactaagtgggttccaccat 40328291  T
Q  247 cattaattattttttactttt 267  Q
    ||||| |||| ||||||||||    
T  40328290 cattagttatattttactttt 40328270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 26768937 - 26768887
Alignment:
Q  217 tgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||| ||| ||||||||| ||| ||| |||||||||||||||||||||||    
T  26768937 tgggttctatcattaagtgagtctcaccatcattaattattttttactttt 26768887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 44483809 - 44483759
Alignment:
Q  217 tgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||||||| ||| | |||| |||||||||||||||||| ||||    
T  44483809 tgggtcctaccattaaatggattccaccatcattaattattttttattttt 44483759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 202
Target Start/End: Original strand, 49384627 - 49384680
Alignment:
Q  148 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 202  Q
    ||||||| |||||| |||||||||||||| || ||||||| ||||||||||||||    
T  49384627 atcctctccatttgttaaaataaatggaa-tatacaatttagagagagatagaca 49384680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 39426019 - 39425970
Alignment:
Q  218 gggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||| |||||||| | |||||||||||| |||||| |||||    
T  39426019 gggtcctaccattgagtgggtctcgctatcattaattttttttttctttt 39425970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 1228496 - 1228560
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 204  Q
    |||||| ||||||||||||||  |||||||||||||  |   ||||||||||||||| |||||||    
T  1228496 gggttaagatcctcttcatttactaaaataaatggagttttgcaatttggagagagacagacaca 1228560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 12380831 - 12380907
Alignment:
Q  138 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 214  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12380831 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12380907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 12384898 - 12384974
Alignment:
Q  138 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat 214  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||    
T  12384898 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagat 12384974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 27982171 - 27982072
Alignment:
Q  139 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 238  Q
    ||||||| |||||||| |||||   |||||||||||||| |  ||||||||||||| ||||||| | |||||| ||  ||||||| | |||||| |||||    
T  27982171 ggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagatatagacataaaaaatatatgttgggtcccatcattaaatgggt 27982073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 45978117 - 45978041
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcc 223  Q
    ||||||||  |||||||||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||    
T  45978117 gatcctctctatttgataaaataaatggagttttgcaagttggagagagatagatacaaaaaatagatggtgggtcc 45978041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 9e-48; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 2800566 - 2800694
Alignment:
Q  139 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 238  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  2800566 ggggttaggatcctctccatttgataaaattaatggaaatacacaatttggagagagatagacacataaaatagatagtggatcataccattaagtgggt 2800665  T
Q  239 cccactatcattaattattttttactttt 267  Q
    ||||| |||||| ||||||||||||||||    
T  2800666 cccaccatcattgattattttttactttt 2800694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 7215807 - 7215935
Alignment:
Q  139 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 238  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  7215807 ggggttagtatcctctccatttgataaaataaatggaagtgcacaatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggt 7215906  T
Q  239 cccactatcattaattattttttactttt 267  Q
    |||||||||||||||||  ||||||||||    
T  7215907 cccactatcattaattacgttttactttt 7215935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 4804569 - 4804440
Alignment:
Q  138 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 237  Q
    |||||| | |||||||| ||||||  ||||||||||||  |  |||| ||||||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  4804569 aggggtgaagatcctctccatttggcaaaataaatggagttttacaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggg 4804470  T
Q  238 tcccactatcattaattattttttactttt 267  Q
    |||||| |||||||||||| ||||||||||    
T  4804469 tcccaccatcattaattatattttactttt 4804440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 7162196 - 7162076
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||| ||| ||||||||||||||||||||  |   ||| |||||||||||||||||||  ||||||||  |||||||||| | |||||||||||||| ||    
T  7162196 gatcatctccatttgataaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtcccaccat 7162097  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  7162096 cattaattatattttactttt 7162076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 21159332 - 21159452
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| |||||| ||||||||||| |  |   ||| ||||||||| ||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  21159332 gatcctctccatttgttaaaataaatgaagttttgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 21159431  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  21159432 cattaattatattttactttt 21159452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 24484956 - 24484871
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  24484956 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattattttttactttt 24484871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 17944274 - 17944154
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||||||||||  ||||||||||||  |    || ||||||||||||||||||| |||||||||  | |||||||||| ||| |||||||||| ||    
T  17944274 gatcctcttcatttggcaaaataaatggagttttgtaagttggagagagatagacacaaaaaatagatggtaggtcctaccactaaatgggtcccaccat 17944175  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  17944174 cattaattatattttactttt 17944154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 267
Target Start/End: Complemental strand, 27826608 - 27826530
Alignment:
Q  189 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||| ||||    
T  27826608 gagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttattttt 27826530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 12412710 - 12412629
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||||||||||  ||||||||  |||||||||||| ||||||||| |||| |||||||||||| ||||||||||    
T  12412710 ttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccaccatcattaattatattttactttt 12412629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 17828532 - 17828651
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| |||||| || ||||| |||| |||  |||||||||||||||||||||||||||||||||| ||| | |||| ||||||||| |||||  ||    
T  17828532 gatcctctacatttggtataataattgga-gtatgcaatttggagagagatagacacataaaatagatagtggattctactattaagtggatcccatcat 17828630  T
Q  247 cattaattattttttactttt 267  Q
    || |||||| |||||| ||||    
T  17828631 caataattaatttttagtttt 17828651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 23936365 - 23936252
Alignment:
Q  149 tcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||| ||||||||||| | |||| |||||||||||| |||||||||  ||||||||||| || ||||  || | ||||||||||||||||||||| ||    
T  23936365 tcctctccatttgataaattgaatgaaagtacacaattcggagagagagatagacacataagatggatagcggattctaccattaagtgggtcccaccat 23936266  T
Q  247 cattaattattttt 260  Q
    | || |||||||||    
T  23936265 ccttgattattttt 23936252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 227526 - 227643
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 245  Q
    |||||||| |||||| |||||||||||||  |   || |||||||||||||||||||| || |||||||  |||||||||||| ||||||| |||||  |    
T  227526 gatcctctccatttgctaaaataaatggagttttgcattttggagagagatagacacaaaagaatagatggtgggtcctaccactaagtggatcccatca 227625  T
Q  246 tcattaattattttttac 263  Q
    ||||| ||||||||||||    
T  227626 tcattgattattttttac 227643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 2142291 - 2142376
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||||  |  ||||||| | ||||| |||||| |||| |||||||||||||||||||||||    
T  2142291 caatttggagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggttccaccatcattaattattttttactttt 2142376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 13089751 - 13089832
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| || ||||||  |||||||||||| |||||||| ||||| |||||||||||| ||||| ||||    
T  13089751 ttggagagagatagacacaaaatatagatggtgggtcctaccactaagtgggccccaccatcattaattatattttattttt 13089832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 13888520 - 13888603
Alignment:
Q  182 caatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcattaattattttttact 264  Q
    ||||||||||||||||| ||||| || |||||||  ||| |||||||||||| |||||||||  ||||||||||||||||||||    
T  13888520 caatttggagagagatatacacaaaataatagatggtggttcctaccattaactgggtcccatcatcattaattattttttact 13888603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 267
Target Start/End: Original strand, 32254031 - 32254114
Alignment:
Q  184 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||| |||||||||| | |||| || |  ||||||||| ||||||||| |||||||||||||||||||||||||| ||||    
T  32254031 atttggagggagatagacaaaaaaaaaaggtggtgggtcctatcattaagtgagtcccactatcattaattattttttattttt 32254114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 1249150 - 1249229
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||| ||||| |  ||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  1249150 ttggagagagacagacaaa--aaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 1249229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 29698216 - 29698155
Alignment:
Q  206 aaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||  ||| ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  29698216 aaaatagatggtggatcctaccattaagtgggtcccaccatcattaattatattttactttt 29698155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 9952993 - 9953035
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacac 182  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  9952993 gggttaagatcctctccatttgataaaataaatggaagtacac 9953035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 2720411 - 2720373
Alignment:
Q  221 tcctaccattaagtgggtcccactatcattaattatttt 259  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  2720411 tcctaccactaagtgggtcccaccatcattaattatttt 2720373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 7545715 - 7545645
Alignment:
Q  182 caatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 251  Q
    |||||||||||||||||||||| | ||||||  |  ||||||||| || ||||||| ||||||||||||||    
T  7545715 caatttggagagagatagacaccaaaaaataagtggtgggtcctatcactaagtggatcccactatcatta 7545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 9954332 - 9954370
Alignment:
Q  190 agagagatagacacataaaatagataatgggtcctacca 228  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  9954332 agagagatagacacataaaatagatagtgggtcccacca 9954370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 29229204 - 29229149
Alignment:
Q  148 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacaca 204  Q
    ||||||| |||||| || |||||||||| |||  |||||||||||||||||||||||    
T  29229204 atcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacaca 29229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 9e-42; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 30709228 - 30709102
Alignment:
Q  141 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 240  Q
    |||||||||||||| ||| | ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||    
T  30709228 ggttaggatcctctccatcttataaaatcaatgaaagtacacaatttggagagagatagacacataaaatagatattgggtcctaccactaagtggatcc 30709129  T
Q  241 cactatcattaattattttttactttt 267  Q
    ||| |||||||||| ||||||||||||    
T  30709128 caccatcattaattgttttttactttt 30709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 267
Target Start/End: Original strand, 4446852 - 4446979
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 239  Q
    ||||||| ||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||| ||| |||||||| ||| |||||     
T  4446852 gggttagtatcctctccatttgataaaataaatggaagtgtacaatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtt 4446951  T
Q  240 ccactatcattaattattttttactttt 267  Q
     |||||||||||||||||||||||||||    
T  4446952 tcactatcattaattattttttactttt 4446979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 138 - 262
Target Start/End: Complemental strand, 19908899 - 19908777
Alignment:
Q  138 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 237  Q
    |||||| | |||||||||||||||||| |||||||||| |||  |||||||||| ||||||||||||||||||||||| || |||||||  |||||||||    
T  19908899 aggggtaaagatcctcttcatttgatataataaatgga-gtatgcaatttggag-gagatagacacataaaatagatagtgagtcctacttttaagtggg 19908802  T
Q  238 tcccactatcattaattatttttta 262  Q
    |||||| ||||||||||||||||||    
T  19908801 tcccaccatcattaattatttttta 19908777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 267
Target Start/End: Original strand, 31618724 - 31618850
Alignment:
Q  139 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 238  Q
    |||||||||||||||| |||||||||||  ||||||| ||| |||||||||||| ||||||| | |||||||||||| || ||| || ||||||||| ||    
T  31618724 ggggttaggatcctctccatttgataaag-aaatgga-gtatacaatttggagaaagatagatatataaaatagatagtgagtcatatcattaagtgagt 31618821  T
Q  239 cccactatcattaattattttttactttt 267  Q
    ||||| |||||||||||||||||||||||    
T  31618822 cccacaatcattaattattttttactttt 31618850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 35316937 - 35316817
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  35316937 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 35316838  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  35316837 cattaattatattttactttt 35316817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 30217592 - 30217517
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 215  Q
    |||||||||||||||  ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  30217592 gggttaggatcctctctatttgataaaataaatggaagcacacaatttagagtgagatagacacataaaatagata 30217517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 28564961 - 28564884
Alignment:
Q  190 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  28564961 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 28564884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 13238793 - 13238673
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||||||  ||||||||||||| ||    
T  13238793 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccaccat 13238694  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||| ||||    
T  13238693 cattaattatattttattttt 13238673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 267
Target Start/End: Original strand, 21454494 - 21454577
Alignment:
Q  183 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||| |||||||||||||||| |||||||||  |||||| ||||||||||||||| |||| |||||||||||||||||||||||    
T  21454494 aatttagagagagatagacaca-aaaatagattgtgggtcataccattaagtgggttccaccatcattaattattttttactttt 21454577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 164 - 267
Target Start/End: Complemental strand, 36929810 - 36929708
Alignment:
Q  164 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 263  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||| || || ||||||||||||| ||| | || | ||||||||||| |||||||    
T  36929810 aaaataaatgga-gtatgcaatttggagagagatagacacataaaataggtagtgtgtcctaccattaaatggattccgccatcattaattactttttac 36929712  T
Q  264 tttt 267  Q
    ||||    
T  36929711 tttt 36929708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 15709862 - 15709765
Alignment:
Q  164 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 262  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  ||||||||||| ||||||    
T  15709862 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaattacttttta 15709765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 34512022 - 34512108
Alignment:
Q  181 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||| |||||||||||||||||||||| |||||  ||| ||||||| |||| ||| |||||||||| ||||||||||||    
T  34512022 acaatttggagaaagatagacacataaaatagatagtgggttatactattaagtaggtctcacaatcattaattgttttttactttt 34512108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 375070 - 374985
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||  | |||||||||||||| |||||||||||||||||||||||    
T  375070 caatttggagagagatagacacaaaaaataagtggtgggtcctattactaagtgggtcccaccatcattaattattttttactttt 374985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 8988932 - 8988847
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||||  | || ||||||| || |||||||||||||| |||||||||||||||||| ||||    
T  8988932 caatttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcattaattattttttattttt 8988847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 259
Target Start/End: Original strand, 30857638 - 30857753
Alignment:
Q  143 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 242  Q
    |||||||||||| ||||| | |||||||||||| |||   |||||| |||||| |||||||| |||||||||||||| |||||| ||||| ||| || ||    
T  30857638 ttaggatcctctccatttcacaaaataaatgga-gtatgtaatttgaagagaggtagacacaaaaaatagataatggatcctactattaaatggatcaca 30857736  T
Q  243 ctatcattaattatttt 259  Q
    | |||||||||||||||    
T  30857737 ccatcattaattatttt 30857753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 23259489 - 23259570
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| ||||||| |  |||||||||| | ||||||| |||||| |||||||||||| ||||||||||    
T  23259489 ttggagagagatagacacaaaaaatagctggtgggtcctactactaagtggatcccaccatcattaattatattttactttt 23259570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 23459844 - 23459929
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||||||||||||||    
T  23459844 caatttggagagagatagacacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttactttt 23459929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 35315286 - 35315371
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||| |||||||||||||||||||||||||||||| || ||| ||||| || ||||||| || |||||||| |||||| ||||    
T  35315286 caatttgaagagagatagacacataaaatagataatggatcttactattaattgagtcccaccattattaattactttttaatttt 35315371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 38397158 - 38397073
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||| ||||||||||||| |||||||||||| ||||| |||| |||||||| ||||||| |||| |||||| |||||| ||||    
T  38397158 caatttgaagagagatagacaaataaaatagatagtgggtgctactattaagtgagtcccaccatcaataattactttttagtttt 38397073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 267
Target Start/End: Complemental strand, 2063472 - 2063345
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagat-aatgggtcctaccattaagtgggt 238  Q
    |||||| |||||||||||||||| ||||||||| || ||   ||||||||||||||||||||||| |||||||||   | ||||||||||  ||||||||    
T  2063472 gggttaagatcctcttcatttgacaaaataaataga-gtttgcaatttggagagagatagacacaaaaaatagatggtttggtcctaccaccaagtgggt 2063374  T
Q  239 cccactatcattaattattttttactttt 267  Q
     |||| ||||||||| || || |||||||    
T  2063373 tccaccatcattaataatattatactttt 2063345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 30721564 - 30721632
Alignment:
Q  139 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa 209  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  30721564 ggggttaagatccgctccatttgataaaataaatagaagtacacaatttg--gagagatagacacataaaa 30721632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 36758825 - 36758944
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| |||||   |||||||||||||||   ||||||||||||||||||||||| ||| ||  |  ||| ||||| | ||| |||||| |||| ||    
T  36758825 gatcctctccatttataaaaataaatggaagttg-caatttggagagagatagacacaaaaagtaagtggtggatcctatctttaggtgggttccacaat 36758923  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||||||||||||||    
T  36758924 cattaattattttttactttt 36758944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 267
Target Start/End: Complemental strand, 15722328 - 15722226
Alignment:
Q  164 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 263  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| ||||||||||  |||||||    
T  15722328 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcattaattcctttttac 15722230  T
Q  264 tttt 267  Q
    ||||    
T  15722229 tttt 15722226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 267
Target Start/End: Complemental strand, 35315620 - 35315494
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 239  Q
    |||||| |||||||| |||||   |||||||||||||| |  ||||||||||||||||| ||||| | ||||| |  ||||||||| ||||||||| |||    
T  35315620 gggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagataaacacaaacaataggtggtgggtcctatcattaagtgagtc 35315522  T
Q  240 ccactatcattaattattttttactttt 267  Q
    |  | ||| |||| ||||||||||||||    
T  35315521 cttccatcgttaactattttttactttt 35315494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 22061433 - 22061498
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaataga 213  Q
    ||||||||  |||||| |||||||||| |||||  ||||||| ||||||||||||||||||||||||    
T  22061433 gatcctctcaatttgacaaaataaatg-aagtatgcaatttgaagagagatagacacataaaataga 22061498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 29188731 - 29188645
Alignment:
Q  182 caatttggagagagatagacacataaaataga-taatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||   | |  || |||||| || |||| ||||||||| |||||||||||||||||||||||    
T  29188731 caatttggagagagatagacacaaaaaaacaagtggtgcgtcctatcactaagcgggtcccaccatcattaattattttttactttt 29188645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 262
Target Start/End: Original strand, 4603114 - 4603187
Alignment:
Q  189 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 262  Q
    |||||||||||||| | | |||| |||||| || |||||||||  |||||||||| |||||||||||| |||||    
T  4603114 gagagagatagacatagacaatatataatgagttctaccattagatgggtcccaccatcattaattatatttta 4603187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 19905958 - 19905889
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 251  Q
    |||||| ||||||||||||||||||||||||||  |||| | ||  |||||||| ||||||| |||||||    
T  19905958 caattttgagagagatagacacataaaatagatggtgggacatattattaagtgagtcccaccatcatta 19905889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 30803395 - 30803312
Alignment:
Q  184 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||| |||||||||||| | ||||||||| || |  ||||| || ||||||| |||||| |||||||||| ||||| ||||||    
T  30803395 atttgtagagagatagacgcctaaaatagacaacgaatcctatcagtaagtggatcccaccatcattaattgtttttcactttt 30803312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 38260370 - 38260294
Alignment:
Q  181 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 259  Q
    ||||||||||||||||||| || | ||||||||   |||||| ||||||||||||  |||||  |||||||||||||||    
T  38260370 acaatttggagagagatagccaaaaaaaatagag--tgggtcttaccattaagtgaatcccataatcattaattatttt 38260294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 267
Target Start/End: Original strand, 3354812 - 3354846
Alignment:
Q  233 gtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||| |||||||||||||||||||||||    
T  3354812 gtgggtcccaccatcattaattattttttactttt 3354846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 267
Target Start/End: Complemental strand, 30217512 - 30217482
Alignment:
Q  237 gtcccactatcattaattattttttactttt 267  Q
    |||||||||||||||||||||||||||||||    
T  30217512 gtcccactatcattaattattttttactttt 30217482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 6946384 - 6946335
Alignment:
Q  141 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttgga 190  Q
    |||||||||||||  |||||||||||||||||| || | |||||||||||    
T  6946384 ggttaggatcctccccatttgataaaataaatgaaaatgcacaatttgga 6946335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 26800389 - 26800321
Alignment:
Q  194 agatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 262  Q
    ||||| |||||||||||||||||| |||||| | ||||| || ||| |   ||||||||||||||||||    
T  26800389 agataaacacataaaatagataataggtcctgctattaaatgagtcacgtcatcattaattatttttta 26800321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 41072961 - 41073025
Alignment:
Q  196 atagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttt 260  Q
    ||||||| ||||||||| |  ||||||||| |||||| ||| || ||| ||||||||||||||||    
T  41072961 atagacatataaaatagttggtgggtcctatcattaaatggatctcacaatcattaattattttt 41073025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 42761831 - 42761705
Alignment:
Q  141 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcc 240  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| |||||||| | ||||||| |    
T  42761831 ggttaggatcctcttcacttaataaaataaatggaagtacgcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttc 42761732  T
Q  241 cactatcattaattattttttactttt 267  Q
    ||  |||||||||||||||||| ||||    
T  42761731 catcatcattaattattttttaatttt 42761705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 26749546 - 26749631
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  26749546 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattattttttactttt 26749631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 30426671 - 30426752
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  30426671 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 30426752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 21360400 - 21360268
Alignment:
Q  138 aggggttaggatcctcttcatttgataaaataaatggaag----tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaag 233  Q
    ||||||||||||||||| ||||||||||||||||| ||||    |||| |||||||||||||||| |||||||| ||||||||| | || ||||||||||    
T  21360400 aggggttaggatcctctccatttgataaaataaat-gaagtacatacataatttggagagagataaacacataatatagataatagatcataccattaag 21360302  T
Q  234 tgggtcccactatcattaattattttttactttt 267  Q
    |||  ||||| || |||||||| |||||| ||||    
T  21360301 tggaccccaccattattaattactttttattttt 21360268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 267
Target Start/End: Original strand, 24557162 - 24557264
Alignment:
Q  164 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 263  Q
    |||||||||||||| |  ||||||||| ||||||| | ||||||||||| |||||||||||||||||||||| ||||||  ||||||||||| |||||||    
T  24557162 aaaataaatggaag-atgcaatttggaaagagatatagacataaaataggtaatgggtcctaccattaagtgagtcccatcatcattaattactttttac 24557260  T
Q  264 tttt 267  Q
    ||||    
T  24557261 tttt 24557264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 28069831 - 28069711
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  28069831 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 28069732  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||| ||||    
T  28069731 cattaattatattttattttt 28069711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 36991468 - 36991348
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| |  |||||||| ||||||||||||| |||||||||||||| ||    
T  36991468 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacataagaaatagatgatgggtcctaccactaagtgggtcccaccat 36991369  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||| ||||||    
T  36991368 cattaattatatttgactttt 36991348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 18689585 - 18689488
Alignment:
Q  164 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 262  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  ||||||||||| ||||||    
T  18689585 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaattacttttta 18689488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 6014307 - 6014186
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccacta 245  Q
    |||||||| |||||| |||||||||| ||  |   ||||||||||| ||||||||||| || ||||||| || |||||||||||||||||| ||| | ||    
T  6014307 gatcctctccatttgctaaaataaatagagttttgcaatttggagaaagatagacacaaaagaatagatgataggtcctaccattaagtggatcctatta 6014208  T
Q  246 tcattaattattttttactttt 267  Q
    ||||||||||| ||||||||||    
T  6014207 tcattaattatgttttactttt 6014186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 262
Target Start/End: Original strand, 42338008 - 42338124
Alignment:
Q  145 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 244  Q
    ||||||||||||||||||||||||||||  ||||| | |||||||||||| ||| |||  ||||||||||| ||| |  ||| |||||||| ||||| |     
T  42338008 aggatcctcttcatttgataaaataaat-taagtatataatttggagagatatatacatgtaaaatagatagtggattgtactattaagtgtgtccctcc 42338106  T
Q  245 atcattaattatttttta 262  Q
    ||||||||||| ||||||    
T  42338107 atcattaattacttttta 42338124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 36748492 - 36748566
Alignment:
Q  184 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 259  Q
    ||||||||| ||||||||||| |||||||| |  ||||||||||||||||||| |||||| |||||||||||||||    
T  36748492 atttggagatagatagacaca-aaaatagacagcgggtcctaccattaagtggatcccaccatcattaattatttt 36748566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 40695249 - 40695330
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| |||||||||  | |||||||||| |||||| || |||| ||||||| |||| ||||||||||    
T  40695249 ttggagagagatagacacaaaaaatagatggtaggtcctaccactaagtgagttccaccatcattagttatattttactttt 40695330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 10672519 - 10672591
Alignment:
Q  191 gagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 263  Q
    |||||||||||||| |||||||||  ||| |||||||| |||||| ||||||| |||||||||||| ||||||    
T  10672519 gagagatagacacaaaaaatagatggtggatcctaccactaagtgagtcccaccatcattaattatattttac 10672591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 267
Target Start/End: Complemental strand, 45113390 - 45113262
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggt 238  Q
    |||||| |||||||| |||||| |||||||||| |   |   ||||||||||||| ||||||||| || |||||||  ||||||| |||| |||||| ||    
T  45113390 gggttaagatcctctccatttgctaaaataaattgtgttttgcaatttggagagacatagacacaaaagaatagatggtgggtccaaccactaagtgtgt 45113291  T
Q  239 cccactatcattaattattttttactttt 267  Q
    ||||  |||||||||||||||||| ||||    
T  45113290 cccatcatcattaattattttttattttt 45113262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 1937152 - 1937238
Alignment:
Q  182 caatttggagagagatagacacataaaataga-taatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||   | |  ||||||||| || |||| ||||||||| |||||||||||||||||||||||    
T  1937152 caatttggagagagatagacacaaaaaaacaagtggtgggtcctatcactaagcgggtcccaccatcattaattattttttactttt 1937238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 6148997 - 6149043
Alignment:
Q  221 tcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||    
T  6148997 tcctatcattaagtggatcccactatcattaattattttttactttt 6149043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 10652571 - 10652701
Alignment:
Q  138 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 237  Q
    |||||| | |||||||| |||||| ||||||||||||   |   ||| ||||||||||||||| ||| ||||| |||  |||||| ||| | ||| ||||    
T  10652571 aggggtgaagatcctctccatttggtaaaataaatggtgttttgcaagttggagagagatagatacaaaaaattgatggtgggtcatactactaattggg 10652670  T
Q  238 tcccactatcattaattat-tttttactttt 267  Q
    |||||| |||||||||||| |||||||||||    
T  10652671 tcccaccatcattaattatatttttactttt 10652701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 17520459 - 17520381
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttt 260  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||| ||||||||||| | || || ||||||| |||||    
T  17520459 caatttggagagatatagacacataaaatagatagcgagtcctactattaagtgggttctaccattattaatttttttt 17520381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 34612640 - 34612562
Alignment:
Q  183 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttt 261  Q
    ||||| |||||||||||||||| ||||||  |  ||||||||| || |||||||||| ||| |||||||||||||||||    
T  34612640 aatttagagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtctcaccatcattaattatttttt 34612562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 28318924 - 28318985
Alignment:
Q  206 aaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||| ||||| |||||||||||| ||||||||||| || |||||||||||| ||||||||||    
T  28318924 aaaaaagatagtgggtcctaccactaagtgggtccaaccatcattaattatattttactttt 28318985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 41511335 - 41511254
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||| ||||||||| | | |||||||||| ||||||||| || ||||||| | |||| |||||||||||| ||||||||||    
T  41511335 ttggaaagagatagatataaaaaatagatagtgggtcctatcactaagtggtttccaccatcattaattatattttactttt 41511254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 6399991 - 6399916
Alignment:
Q  192 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||| |||||||||  |||||| ||  |  |||||| ||||| ||||||||||||||||||||||||    
T  6399991 agagatagacacaaaaaatagatggtgggtcttattaccaagtggatcccattatcattaattattttttactttt 6399916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 267
Target Start/End: Original strand, 37966397 - 37966525
Alignment:
Q  137 gaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgg 236  Q
    ||||||||| |||||||| ||||||  ||||||||||||| |   ||||||| ||||||||| ||||| |||||||||  | |||||||||| ||| | |    
T  37966397 gaggggttaagatcctctccatttggcaaaataaatggaa-tttgcaatttgaagagagataaacacaaaaaatagattgtaggtcctaccactaa-ttg 37966494  T
Q  237 gtcccactatcattaattattttttactttt 267  Q
      |||| || |||||||||| ||||||||||    
T  37966495 aacccaataccattaattatattttactttt 37966525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 3763520 - 3763605
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||| | |||||| | |||| || |  |||||||||||||||||||||| ||||  |||||||||  |||||||||||    
T  3763520 caatttggagagtggtagacaaaaaaaaaaggtggtgggtcctaccattaagtgggttccaccgtcattaattgctttttactttt 3763605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 267
Target Start/End: Complemental strand, 30796307 - 30796270
Alignment:
Q  230 taagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||||| |||||||||||||||||||||||    
T  30796307 taagtgggtcccaccatcattaattattttttactttt 30796270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 44859189 - 44859250
Alignment:
Q  206 aaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||  ||||| |||||| |||||||||||||| |||||||||||| ||||| ||||    
T  44859189 aaaatagatggtgggttctaccactaagtgggtcccaccatcattaattatattttattttt 44859250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 20169190 - 20169125
Alignment:
Q  136 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 202  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  20169190 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 20169125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 24102085 - 24102019
Alignment:
Q  190 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattat 256  Q
    ||||||||||||| | |||||||||  ||| |||||||| |||||| || |||| ||||||||||||    
T  24102085 agagagatagacataaaaaatagatggtggatcctaccactaagtgagttccaccatcattaattat 24102019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 24241608 - 24241567
Alignment:
Q  226 ccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||||  ||| |||||||||||||||||||||||    
T  24241608 ccattaagtgggtttcaccatcattaattattttttactttt 24241567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 257
Target Start/End: Complemental strand, 21486993 - 21486925
Alignment:
Q  189 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatt 257  Q
    ||||||||| || | | |||||| ||| ||||| |||| |||||||| ||||||| |||||||||||||    
T  21486993 gagagagatggatataaaaaatatatagtgggttctactattaagtgagtcccaccatcattaattatt 21486925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 24241705 - 24241673
Alignment:
Q  235 gggtcccactatcattaattattttttactttt 267  Q
    ||||||||| |||||||||||||||||||||||    
T  24241705 gggtcccaccatcattaattattttttactttt 24241673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 255
Target Start/End: Complemental strand, 29341106 - 29340999
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| |||||| || |||||||||| |||  ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||    
T  29341106 gatcctctccatttggtataataaatgga-gtatgcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccaccat 29341008  T
Q  247 cattaatta 255  Q
    |||||||||    
T  29341007 cattaatta 29340999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 35660572 - 35660692
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  35660572 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 35660671  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  35660672 cattaattatattttactttt 35660692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 4895699 - 4895818
Alignment:
Q  148 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 247  Q
    |||||||| |||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||    
T  4895699 atcctctttatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatc 4895798  T
Q  248 attaattattttttactttt 267  Q
    ||||||||| ||||||||||    
T  4895799 attaattatattttactttt 4895818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 11775905 - 11775785
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| |||||||| ||||||||||||||  |    
T  11775905 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccgt 11775806  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  11775805 cattaattatattttactttt 11775785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 32129580 - 32129700
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |  | || ||||||||||||||||||  |||||||||  |||||||||||| |||||||||||||| ||    
T  32129580 gatcctctccatttggcaaaataaatggagttttataagttggagagagatagacaccaaaaatagatggtgggtcctaccactaagtgggtcccaccat 32129679  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  32129680 cattaattatattttactttt 32129700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 14349876 - 14349795
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  14349876 ttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 14349795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 18625384 - 18625504
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||| ||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  18625384 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 18625483  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||| ||||    
T  18625484 cattaattatattttattttt 18625504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 37266843 - 37266723
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  37266843 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 37266744  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||| ||||    
T  37266743 cattaattatattttagtttt 37266723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 10362012 - 10362097
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||| ||||||||||||| ||||||||| | || ||| ||||||||||||||||||| |||  ||||||||||||||||||||||    
T  10362012 caattaggagagagatagagacataaaattggtagtggatcctaccattaagtgggtctcaccgtcattaattattttttactttt 10362097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 36290679 - 36290594
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||||  |  ||||||||| || ||||||| |||||| |||||||||||||||||||||||    
T  36290679 caatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtggatcccaccatcattaattattttttactttt 36290594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 40753164 - 40753245
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||| ||||||||||| |||||| ||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  40753164 ttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 40753245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 43309220 - 43309108
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    ||||||||| |||||||||||||||||||  |   ||| ||||||||||||||||| | |||||||||| ||| || ||||||||| ||||| |||| ||    
T  43309220 gatcctctttatttgataaaataaatggagttttgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttccaccat 43309121  T
Q  247 cattaattatttt 259  Q
    |||||||| ||||    
T  43309120 cattaattttttt 43309108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 267
Target Start/End: Complemental strand, 34827287 - 34827184
Alignment:
Q  164 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 263  Q
    ||||||||||||  ||  ||| ||||||||||||||||| | |||||||||  ||| |||||||| |||||||||||||| ||| |||||||| ||||||    
T  34827287 aaaataaatggagttatgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggtcccaccatctttaattatattttac 34827188  T
Q  264 tttt 267  Q
    ||||    
T  34827187 tttt 34827184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 267
Target Start/End: Complemental strand, 39902525 - 39902407
Alignment:
Q  149 tcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatca 248  Q
    |||||| ||||||| ||||||||||||  |  |||| ||||||||||||| |||||  ||||||||  |||||||||||| ||| ||| | |||| ||||    
T  39902525 tcctctccatttgacaaaataaatggagttttacaagttggagagagataaacacaagaaatagatggtgggtcctaccactaaatggattccaccatca 39902426  T
Q  249 ttaattattttttactttt 267  Q
    |||||||| ||||||||||    
T  39902425 ttaattatattttactttt 39902407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 267
Target Start/End: Original strand, 2984389 - 2984473
Alignment:
Q  183 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||||||||||||||||||||  | |||  ||||| || ||| |||||||||| |||||||||||||||||| ||||    
T  2984389 aatttggagagagatagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcattaattattttttattttt 2984473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 13032230 - 13032110
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  || ||||||||| ||| |||||||||| ||    
T  13032230 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggtcccaccat 13032131  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||| ||||    
T  13032130 cattaattatattttattttt 13032110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 262
Target Start/End: Complemental strand, 31653112 - 31653032
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 262  Q
    ||||||||||||||||| ||||||||||||||||  | ||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  31653112 caatttggagagagataaacacataaaatagatagcgagtcctactattaagtgagtctcacaatcattaattacttttta 31653032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 3057152 - 3057237
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||| ||||||| ||||| |||||||||  ||| ||||||||||||||| ||| ||  |||||||||||| ||||||||||    
T  3057152 caatttggatagagataaacacaaaaaatagatggtggatcctaccattaagtgagtcacataatcattaattatattttactttt 3057237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 18653438 - 18653353
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||| ||||||||||||||| |||||||||| || || ||||||||||||| ||| ||| || | |||||||||| |||||||    
T  18653438 caatttgaagagagatagacacaaaaaatagatagtgagttctaccattaagtgagtctcaccattaataattattttatactttt 18653353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 41660183 - 41660100
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactt 265  Q
    ||||||||||||||||||||||| ||||||  |  ||||||  | || || ||||||||||| |||||||||||||||||||||    
T  41660183 caatttggagagagatagacacaaaaaataagtggtgggtctcatcactaggtgggtcccaccatcattaattattttttactt 41660100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 4592858 - 4592792
Alignment:
Q  201 cacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||| |||||||||  |||||| ||||| |||||||||||||| |||||||||||| ||||||||||    
T  4592858 cacaaaaaatagatggtgggtcttaccactaagtgggtcccaccatcattaattatattttactttt 4592792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 14688643 - 14688566
Alignment:
Q  190 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||| ||||||||||||||||| ||| | |||||||||||||| | |||| |||||||  ||||||| ||||||    
T  14688643 agagagatcgacacataaaatagatattggattctaccattaagtggattccaccatcattagatatttttgactttt 14688566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 31279990 - 31279914
Alignment:
Q  183 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 259  Q
    ||||||||||| | ||||||||||||||| ||  ||||||||| ||||| |||||||| || || ||||||||||||    
T  31279990 aatttggagagtgctagacacataaaataaattgtgggtcctatcattatgtgggtcctaccataattaattatttt 31279914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 267
Target Start/End: Complemental strand, 3057534 - 3057408
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 239  Q
    |||||| |||||||| |||||  |||||||||| || ||   ||||| ||||||||||||||| | |||| |||| |||| ||||||||  ||||| ||     
T  3057534 gggttaagatcctctccattttgtaaaataaataga-gttttcaattcggagagagatagacaaaaaaaaaagatgatggatcctaccacaaagtgagtt 3057436  T
Q  240 ccactatcattaattattttttactttt 267  Q
    |||  ||||||||||||||| |||||||    
T  3057435 ccatcatcattaattattttatactttt 3057408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 259
Target Start/End: Complemental strand, 43222193 - 43222126
Alignment:
Q  192 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 259  Q
    ||||||||||||| |||||||||  |||||| || |||||| ||| |||||| |||||||||||||||    
T  43222193 agagatagacacaaaaaatagatggtgggtcttatcattaaatggatcccaccatcattaattatttt 43222126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 9460597 - 9460662
Alignment:
Q  145 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaata 211  Q
    |||||||||| |||||| |||||||||| || |||  ||||||||||||||||||||||||| ||||    
T  9460597 aggatcctctccatttggtaaaataaataga-gtatgcaatttggagagagatagacacatataata 9460662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 27428879 - 27428949
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaa 252  Q
    ||||||||| ||||||||||||| |||||||||  ||  ||||||||||||||| || |||| ||||||||    
T  27428879 caatttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcattaa 27428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 28142812 - 28142858
Alignment:
Q  221 tcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  28142812 tcctaccattaagtgagtcccaccatcattaattatattttactttt 28142858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 31546563 - 31546478
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||| |||||| |||||| |||||||||||  |||| ||||| ||||||||| |||||  || |||||||| |||||| ||||    
T  31546563 caatttgaagagaggtagacatataaaatagatggtgggccctactattaagtggatcccatcataattaattactttttagtttt 31546478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 267
Target Start/End: Complemental strand, 17247482 - 17247398
Alignment:
Q  183 aatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||| ||||||||||||| || ||||||| |  ||||| ||| ||||||||| || |||  || ||||||||||||||||||||    
T  17247482 aatttagagagagatagacgcaaaaaataggtggtgggttctatcattaagtgcgttccatcataattaattattttttactttt 17247398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 260
Target Start/End: Complemental strand, 38283855 - 38283776
Alignment:
Q  181 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttt 260  Q
    |||||||||||||| ||||||||||||| ||| |  |||||| || |||||| |  |||  |||||||||||||||||||    
T  38283855 acaatttggagagatatagacacataaagtaggtggtgggtcatatcattaaataagtctgactatcattaattattttt 38283776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 3041341 - 3041391
Alignment:
Q  217 tgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||| || |||| ||||||||| |||||||||||||||||| ||||    
T  3041341 tgggtcctatcactaagcgggtcccaccatcattaattattttttattttt 3041391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 174
Target Start/End: Complemental strand, 21213987 - 21213953
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatgg 174  Q
    ||||||||||||||| |||||||||||||||||||    
T  21213987 gggttaggatcctctccatttgataaaataaatgg 21213953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 8440981 - 8441054
Alignment:
Q  194 agatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||  |||||||||  || | | ||||| |||||| ||||||| |||||||||||| ||||||||||    
T  8440981 agatagacaccaaaaatagatggtgcgacataccactaagtgtgtcccaccatcattaattatattttactttt 8441054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 19901881 - 19902001
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| |||||| |||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  19901881 gatcctctccatttggtaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 19901980  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  19901981 cattaattatattttactttt 19902001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 36532741 - 36532618
Alignment:
Q  142 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 241  Q
    |||| |||||||| ||| |||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||| ||||| |||| ||||||| ||    
T  36532741 gttaagatcctctccatctgataaaataaatgga-gttcacaatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttcc 36532643  T
Q  242 actatcattaattattttttactttt 267  Q
    || || ||||||||||||||||||||    
T  36532642 accat-attaattattttttactttt 36532618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 5416429 - 5416548
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| ||    
T  5416429 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacaca-aaaatagattgtgggtcctaccactaagtgggtcccaccat 5416527  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  5416528 cattaattatattttactttt 5416548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 23610754 - 23610634
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||||||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| |||||||||||||| ||    
T  23610754 gatcctctccatttgataaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccat 23610655  T
Q  247 cattaattattttttactttt 267  Q
    |||||| ||| ||||||||||    
T  23610654 cattaaatatattttactttt 23610634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 140 - 267
Target Start/End: Original strand, 56453777 - 56453903
Alignment:
Q  140 gggttaggatcctcttcatttgata-aaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 238  Q
    |||||| |||||||| ||||| ||| ||||||||||||| |  ||||||||||||||||||||||| ||||||| |  ||||||||| ||||||||||||    
T  56453777 gggttaagatcctctccattt-atagaaataaatggaag-atgcaatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggt 56453874  T
Q  239 cccactatcattaattattttttactttt 267  Q
    ||||| |||||| ||||||||||||||||    
T  56453875 cccaccatcattcattattttttactttt 56453903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 56558400 - 56558271
Alignment:
Q  138 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 237  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||||||||| || ||||||||    
T  56558400 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtggg 56558301  T
Q  238 tcccactatcattaattattttttactttt 267  Q
    |||||| |||||||||||| ||||||||||    
T  56558300 tcccaccatcattaattatattttactttt 56558271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 42844148 - 42844270
Alignment:
Q  144 taggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccac 243  Q
    ||||||||||| ||| | ||||||||||| ||  || |||||||||||| |||||||||||||||||||| | || ||||||| ||||| ||| |||| |    
T  42844148 taggatcctctccatattataaaataaatagagtta-acaatttggagatagatagacacataaaatagagagtgtgtcctactattaaatggatccctc 42844246  T
Q  244 tatcattaattattttttactttt 267  Q
     |||||||||||||||||||||||    
T  42844247 catcattaattattttttactttt 42844270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 267
Target Start/End: Original strand, 5763159 - 5763245
Alignment:
Q  181 acaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  5763159 acaagttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 5763245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 1871392 - 1871277
Alignment:
Q  143 ttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccca 242  Q
    ||||||||||||  |||||| |||||||||||| |||  ||||||||||||||||||||| | || ||||||| ||| |||||| | |||||||||||||    
T  1871392 ttaggatcctctcaatttgacaaaataaatgga-gtatgcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtccca 1871294  T
Q  243 ctatcattaattatttt 259  Q
      |||||||||||||||    
T  1871293 tcatcattaattatttt 1871277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 3952133 - 3952253
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||||||||  |||||||||||| |||||||||| ||| ||    
T  3952133 gatcctctccatttggcaaaataaatggagtttggcaagttggagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtctcaccat 3952232  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  3952233 cattaattatattttactttt 3952253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 34778533 - 34778413
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||| ||||||||||||||| |||||||||  ||| |||||||| |||||||||||||| ||    
T  34778533 gatcctctccatttggcaaaataaatggagttttgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccat 34778434  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  34778433 cattaattatattttactttt 34778413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 56269074 - 56269153
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttt 261  Q
    ||||||||||||||||||||||| ||||||  |  |||||||||||| |||||||||||||| |||||||||||||||||    
T  56269074 caatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaattatttttt 56269153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 5524524 - 5524439
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||| | ||||||  |  ||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  5524524 caatttggagagagatagacataaaaaataagtggtgggtcctatcagtaagtgggtcccaccatcattaattattttttactttt 5524439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 5815267 - 5815383
Alignment:
Q  148 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 247  Q
    ||||||| ||||||||||||||||||| |||||| ||||| |||||||||||||||  |||||| |||||||||| ||||| |||||  |||  || |||    
T  5815267 atcctctccatttgataaaataaatgg-agtacaaaattttgagagagatagacac--aaaatatataatgggtcataccactaagtaagtcggaccatc 5815363  T
Q  248 attaattattttttactttt 267  Q
     ||||| |||||||||||||    
T  5815364 tttaataattttttactttt 5815383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 48914516 - 48914596
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 262  Q
    |||||| ||||||||| ||||||||||||||||  ||||||||| ||| |||||||| || ||||||||||||||||||||    
T  48914516 caatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggttccgctatcattaattatttttta 48914596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 260
Target Start/End: Original strand, 15178628 - 15178738
Alignment:
Q  139 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 238  Q
    ||||||||||| |||| ||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||            |||| |||||||||||    
T  15178628 ggggttaggattctctccatttgataaaatgaatggaagtacataatttgaagagagataaacacataaaatt-----------ctactattaagtgggt 15178716  T
Q  239 cccactatcattaattattttt 260  Q
    |||||| |||||||||||||||    
T  15178717 cccactttcattaattattttt 15178738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 142 - 267
Target Start/End: Original strand, 47922324 - 47922450
Alignment:
Q  142 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcc 240  Q
    |||| |||||||| |||||| |||||||||| ||  |   ||||||||||||| ||||||||| || |||||||  |||||||||||| |||||||||||    
T  47922324 gttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagatatagacacaaaagaatagatggtgggtcctaccactaagtgggtcc 47922423  T
Q  241 cactatcattaattattttttactttt 267  Q
    ||  |||  ||||||||||||||||||    
T  47922424 catcatctataattattttttactttt 47922450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 23474188 - 23474103
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||| ||||  |||||| ||||||||||| |||||| ||||    
T  23474188 caatttggggagagatagacacataaaatagatggtgggtcctactattgagtgaatcccaccatcattaattactttttaatttt 23474103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 30567970 - 30567893
Alignment:
Q  190 agagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||||||| |||  |||||||||||| ||||||||||    
T  30567970 agagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcattaattatattttactttt 30567893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 18207003 - 18207119
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||| |||||||||| |  |   ||| || |||||||||||||| | |||||||||  |||||||||||| |||||||||||||  ||    
T  18207003 gatcctctccatttgacaaaataaatgtagttttgcaagttagagagagatagacaaaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 18207102  T
Q  247 cattaattattttttac 263  Q
    |||||||||| ||||||    
T  18207103 cattaattatattttac 18207119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 39862629 - 39862509
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||||||||||||| ||| |   ||| || |||||||||||||||| |||||||||  || |||||| || ||| || || |||| ||    
T  39862629 gatcctctccatttgataaaataaatagaattttgcaagtttgagagagatagacacaaaaaatagatggtgtgtcctatcactaaatgagttccaccat 39862530  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  39862529 cattaattatattttactttt 39862509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 256
Target Start/End: Complemental strand, 24073689 - 24073619
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattat 256  Q
    |||||||||||||||||||  ||||||||  |||||||||||| |||||||||||| | ||||||||||||    
T  24073689 ttggagagagatagacacaacaaatagatggtgggtcctaccactaagtgggtcccgccatcattaattat 24073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 33262557 - 33262635
Alignment:
Q  189 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||||||| |||||||||  ||| |||||||| ||| | |||||||| |||||||||||| ||||||||||    
T  33262557 gagagagatagacacaaaaaatagatggtggatcctaccactaaataggtcccaccatcattaattatattttactttt 33262635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 36688186 - 36688264
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttt 260  Q
    ||||||||||||||||||||||| ||||||  |  || |||||| || |||||||||||||| ||||||||||||||||    
T  36688186 caatttggagagagatagacacaaaaaataagtgttgagtcctatcactaagtgggtcccaccatcattaattattttt 36688264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 37002249 - 37002334
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||| ||||||||||||| ||||||  |  ||| |||||  | |||||||||||||| |||||||||||||||||||||||    
T  37002249 caatttggaaagagatagacacaaaaaataagtggtggatcctattactaagtgggtcccaccatcattaattattttttactttt 37002334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 42010194 - 42010109
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| ||| ||||||  |   |||||||| || ||| |||||||||| |||||||||||||||||||||||    
T  42010194 caatttggagagagatagatacaaaaaataagtggcgggtcctatcactaaatgggtcccaccatcattaattattttttactttt 42010109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 266
Target Start/End: Original strand, 12312438 - 12312558
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaa-tagataatgggtcctaccattaagtgggtcccacta 245  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||||| | |||| |||||  ||| |||||||| |||||||||||||  |    
T  12312438 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacaaaaaaaaatagatggtggatcctaccactaagtgggtcccatca 12312537  T
Q  246 tcattaattattttttacttt 266  Q
    ||||||||||| |||||||||    
T  12312538 tcattaattatattttacttt 12312558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 33247093 - 33247213
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||  ||||| |||||| ||| ||||| |||| ||    
T  33247093 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggttccaccat 33247192  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||| ||||    
T  33247193 cattaattatattttattttt 33247213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 46804671 - 46804623
Alignment:
Q  219 ggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||    
T  46804671 ggtcctaccattaagtgggtccaactatcattaattactttttactttt 46804623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 1015852 - 1015931
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttt 261  Q
    |||||| |||||||||||||||| ||||||  |  ||||||| | ||||| ||||||||||| |||||||||||||||||    
T  1015852 caatttagagagagatagacacaaaaaataagtggtgggtcccatcattaggtgggtcccaccatcattaattatttttt 1015931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 50483554 - 50483629
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatt 257  Q
    ||||||||||| |||||||||| ||||||||||| | | ||| ||||||||||| ||| || ||||||||||||||    
T  50483554 caatttggagacagatagacacgtaaaatagatattcgatcccaccattaagtgagtcacattatcattaattatt 50483629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 12241441 - 12241491
Alignment:
Q  217 tgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||| |||||||||||||| |||||||||||| ||||||||||    
T  12241441 tgggtcctaccactaagtgggtcccaccatcattaattatattttactttt 12241491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 267
Target Start/End: Original strand, 31862257 - 31862303
Alignment:
Q  221 tcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  31862257 tcctaccactaagtgggtcccaccatcattaattattttttactttt 31862303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 38079725 - 38079803
Alignment:
Q  189 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||  ||||||||  |||||||||| | ||||||| | |||| |||||||||||| ||||||||||    
T  38079725 gagagagatagacacaagaaatagatggtgggtcctactactaagtggattccaccatcattaattatattttactttt 38079803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 255
Target Start/End: Complemental strand, 13493387 - 13493276
Alignment:
Q  145 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagaga--tagacacataaaatagataatgggtcctaccattaagtgggtccca 242  Q
    ||||||||||  |||||| |||||||||||| |||  |||||| ||||||||  ||||||| ||||||||||| ||| ||| |||| |||||| |||||     
T  13493387 aggatcctctctatttgacaaaataaatgga-gtatgcaatttagagagagagatagacacgtaaaatagatagtggatcccaccactaagtgagtccct 13493289  T
Q  243 ctatcattaatta 255  Q
     ||||||||||||    
T  13493288 ttatcattaatta 13493276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 33841766 - 33841830
Alignment:
Q  145 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaat 210  Q
    |||||||||| |||||| |||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  33841766 aggatcctctccatttgttaaagtaaatgga-gtatacaatttggagagagatagacacaaaaaat 33841830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 267
Target Start/End: Original strand, 37337091 - 37337174
Alignment:
Q  184 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||| |||| ||||||| ||||||||||| || |||||  | ||||||||  |||||||| ||||||||||||||||| |||||    
T  37337091 atttagagaaagatagagacataaaataggtagtgggttatgccattaaggaggtcccaccatcattaattattttttgctttt 37337174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 48084558 - 48084608
Alignment:
Q  217 tgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||| ||| || |||||||||||||| |||||||||||||||||||||||    
T  48084558 tgggttctagcactaagtgggtcccaccatcattaattattttttactttt 48084608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 4404409 - 4404282
Alignment:
Q  141 ggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaata--gataatgggtcctaccattaagtgggt 238  Q
    ||||| |||||||| |||||   |||||||||||||| |   |||||||||| ||||||||| | |||| |  | || ||||||||| ||||||||| ||    
T  4404409 ggttaagatcctctccatttataaaaataaatggaag-atgtaatttggagaaagatagacaaaaaaaaaaaggttagtgggtcctatcattaagtgtgt 4404311  T
Q  239 cccactatcattaattattttttactttt 267  Q
    | ||| ||||||||||| |||||||||||    
T  4404310 ctcaccatcattaattaatttttactttt 4404282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 3326560 - 3326509
Alignment:
Q  216 atgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||| ||||||||| ||||| |||| || ||||||||||||||||||||    
T  3326560 atgggtcataccattaaatgggttccaccattattaattattttttactttt 3326509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 34927555 - 34927484
Alignment:
Q  190 agagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcattaattattttt 260  Q
    ||||||||||||||| || |||||||  ||||||||||||||||||  ||| ||  ||||||||||||||||    
T  34927555 agagagatagacacaaaagaatagatggtgggtcctaccattaagtatgtctcatcatcattaattattttt 34927484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 267
Target Start/End: Complemental strand, 5361469 - 5361435
Alignment:
Q  233 gtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||| |||||||||||||||||||||||    
T  5361469 gtgggtcccaccatcattaattattttttactttt 5361435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 267
Target Start/End: Complemental strand, 47834607 - 47834573
Alignment:
Q  233 gtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||| |||||||||||||||||||||||    
T  47834607 gtgggtcccaccatcattaattattttttactttt 47834573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 5818013 - 5817976
Alignment:
Q  181 acaatttggagagagatagacacataaaatagataatg 218  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  5818013 acaatttggagagagatagacacaaaaaagagataatg 5817976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 36003216 - 36003300
Alignment:
Q  153 cttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggt 238  Q
    |||||||||  |||||||||| |||||  ||||||||||||||||| | ||| |||||| ||| |||||| |  ||||||||||||    
T  36003216 cttcatttgtcaaaataaatg-aagtatgcaatttggagagagataaatacaaaaaataaatattgggtcatgtcattaagtgggt 36003300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 17080855 - 17080811
Alignment:
Q  217 tgggtcctaccattaagtgggtcccactatcattaattatttttt 261  Q
    |||||||||||||| |||| ||| ||| |||||||||||||||||    
T  17080855 tgggtcctaccattgagtgagtctcaccatcattaattatttttt 17080811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 52552804 - 52552772
Alignment:
Q  229 ttaagtgggtcccactatcattaattatttttt 261  Q
    |||||||| ||||||||||||||||||||||||    
T  52552804 ttaagtggatcccactatcattaattatttttt 52552772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 4888579 - 4888464
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||| ||    
T  4888579 gatcctctccatttgacaaaataaatggagatttgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtcccaccat 4888480  T
Q  247 cattaattatttttta 262  Q
    |||||||||| |||||    
T  4888479 cattaattatatttta 4888464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 47799898 - 47799983
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| ||||||  | |||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  47799898 caatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattattttttactttt 47799983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 40023215 - 40023333
Alignment:
Q  142 gttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtccc 241  Q
    ||||| |||||||  |||||| ||||||||  || ||| |||||||||||| ||||||||| ||||||||| |||||| || ||||||||||||||||||    
T  40023215 gttagaatcctctctatttgaaaaaataaaacga-gtatacaatttggagaaagatagacatataaaatagttaatggatcttaccattaagtgggtccc 40023313  T
Q  242 actatcattaattatttttt 261  Q
    || | |||||||||||||||    
T  40023314 accaccattaattatttttt 40023333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 12139400 - 12139318
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagt-gggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  12139400 ttggagagagatagacacaaaaaatagatggtgggtcctaccattaagtggggtcccaccatcattaattatattttactttt 12139318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 25084730 - 25084811
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||| |||||||||||| ||||| ||||    
T  25084730 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttattttt 25084811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 33450627 - 33450498
Alignment:
Q  139 ggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtggg 237  Q
    ||||||| |||||||| |||||| |||||||||| ||  |   ||||||||||||||||||||||| || |||||||  ||||||| |||| ||||||||    
T  33450627 ggggttaagatcctctccatttgctaaaataaattgagttttgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtggg 33450528  T
Q  238 tcccactatcattaattattttttactttt 267  Q
    |||||  |||||||||||||||||| ||||    
T  33450527 tcccatcatcattaattattttttattttt 33450498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 47270668 - 47270580
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccat 229  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||| || ||||||||    
T  47270668 gggttaggatcctctctatttgataaaataaatggaattacacaatttagagatagatagacacat-aaatagataataggccctaccat 47270580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 9559017 - 9559137
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||||| ||| |||||||||  |||||||||||| |||||||||||||| ||    
T  9559017 gatcctctccatttggcaaaataaatggagatttgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggtcccaccat 9559116  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||| ||||    
T  9559117 cattaattatattttattttt 9559137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 140 - 267
Target Start/End: Original strand, 39855770 - 39855896
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 239  Q
    |||||| ||| |||||||||||| ||| |||||||| ||    ||||||||||||||||||||||||||| ||||  | |||||||||| ||||||||||    
T  39855770 gggttaagattctcttcatttgacaaattaaatgga-gtttgtaatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggtc 39855868  T
Q  240 ccactatcattaattattttttactttt 267  Q
    |||  |||||||||||  ||||||||||    
T  39855869 ccatcatcattaattaaattttactttt 39855896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 151 - 267
Target Start/End: Complemental strand, 7362676 - 7362560
Alignment:
Q  151 ctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatt 250  Q
    |||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  |||||| ||||| ||| ||||| |||| ||||||    
T  7362676 ctctccatttgacaaaataaatggagttttgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttccaccatcatt 7362577  T
Q  251 aattattttttactttt 267  Q
    |||||| ||||||||||    
T  7362576 aattatattttactttt 7362560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 7712331 - 7712450
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| |||||   |||||||||||||| |  |||||| |||||||||||| |||||| ||||||| || ||||||||||||||||||| |||| ||    
T  7712331 gatcctctccatttataaaaataaatggaag-atgcaatttagagagagatagagacataagatagatagtgagtcctaccattaagtgggtgccaccat 7712429  T
Q  247 cattaattattttttactttt 267  Q
    | ||||||| |||||| ||||    
T  7712430 ctttaattactttttattttt 7712450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 16366630 - 16366510
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||| |  ||||||||  ||| |||||||| |||||| ||||||| ||    
T  16366630 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacataagaaatagatggtggatcctaccactaagtgtgtcccaccat 16366531  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  16366530 cattaattatattttactttt 16366510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 21151264 - 21151144
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| |||||||||||||||||||  ||||||||   || |||||||| |||||||||||||| ||    
T  21151264 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtgggtcccaccat 21151165  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  21151164 cattaattatattttactttt 21151144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 989239 - 989129
Alignment:
Q  148 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 247  Q
    ||||||| ||||||| ||| |||||||| ||   ||||||||||||||||||||||| |||||| ||| |||||||||||| ||||| ||||| || ||     
T  989239 atcctctccatttgacaaattaaatgga-gtttgcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagtaggtccaaccata 989141  T
Q  248 attaattatttt 259  Q
    ||||||||||||    
T  989140 attaattatttt 989129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 32916033 - 32915954
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttt 261  Q
    ||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||| ||||| |||||| ||||    
T  32916033 caatttgaagagagatagacacaaaaaataaatagtgggtcctaccattaagtgagtcccaccatcatgaattatatttt 32915954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 138 - 267
Target Start/End: Original strand, 47500236 - 47500366
Alignment:
Q  138 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgg 236  Q
    |||||||| |||||||| |||||  |||||||||| ||  |    |||||||||||||||||||||| || |||||||  ||||||| |||| |||||||    
T  47500236 aggggttaagatcctctccatttactaaaataaattgagttttgtaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgg 47500335  T
Q  237 gtcccactatcattaattattttttactttt 267  Q
    ||||||  |||||||||||||||||| ||||    
T  47500336 gtcccatcatcattaattattttttattttt 47500366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 8149686 - 8149605
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 263  Q
    ||||||| ||||||||||| || |||||||  || |||||| || ||||||||||||||||| |||||||||||||||||||    
T  8149686 caatttgaagagagatagagacgtaaaataagtagtgggtcatatcattaagtgggtcccaccatcattaattattttttac 8149605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 30588612 - 30588527
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||  ||||||||||||| ||||||  | | |||||||| || |||||||||||||| |||||||||||||||||||||||    
T  30588612 caatttgggaagagatagacacaaaaaataagtgacgggtcctatcactaagtgggtcccaccatcattaattattttttactttt 30588527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 45260429 - 45260510
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| |||||||||  ||| |||||||| ||||||| |||||  |||||||||||| ||||||||||    
T  45260429 ttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcccatcatcattaattatattttactttt 45260510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 29631156 - 29631040
Alignment:
Q  148 atcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatc 247  Q
    ||||||| |||||| |||||||||||| |||   |||||||   ||||||||||||| || ||||||| ||||||| |||| || || ||||||||||||    
T  29631156 atcctctccatttggtaaaataaatgg-agtttgcaatttg--aagagatagacacaaaacatagatagtgggtccaaccactatgtaggtcccactatc 29631060  T
Q  248 attaattattttttactttt 267  Q
    |||||||||| |||||||||    
T  29631059 attaattattctttactttt 29631040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 29844372 - 29844316
Alignment:
Q  178 tacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagt 234  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||    
T  29844372 tacacaatttggagagagatagacacataaaatagatagtgggttctaccactaagt 29844316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 7373985 - 7373867
Alignment:
Q  140 gggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtc 239  Q
    |||||| |||||||||| || | |||||||||||| | ||  ||||||||||||||||||  ||| |||||||| | |||||| ||| ||||||| | ||    
T  7373985 gggttaagatcctcttcgttggttaaaataaatggga-tatgcaatttggagagagataggtacaaaaaatagacagtgggtcttactattaagtagatc 7373887  T
Q  240 ccactatcattaattatttt 259  Q
    ||||||||||||||| ||||    
T  7373886 ccactatcattaattttttt 7373867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 24193668 - 24193585
Alignment:
Q  184 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||| |||||||||||||||||||||||| |||| ||| ||||||||| ||| |||||  |||| |||||| |||||| ||||    
T  24193668 atttgaagagagatagacacataaaatagacaatgagtcttaccattaaatggatcccatcatcagtaattactttttaatttt 24193585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 267
Target Start/End: Complemental strand, 38365761 - 38365647
Alignment:
Q  152 tcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcatta 251  Q
    |||||||||  ||||||||||| || |||  |||||| || |||||||| ||| ||||| ||||||||||| ||| ||||| ||| | | ||||||||||    
T  38365761 tcttcattttttaaaataaatgtaa-tacgtaatttgaagtgagatagatacaaaaaattgataatgggtcttactattaaatggattctactatcatta 38365663  T
Q  252 attattttttactttt 267  Q
    |||||||| |||||||    
T  38365662 attattttatactttt 38365647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 44648076 - 44647958
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg--tcccact 244  Q
    |||||||| ||||||| ||||||||||||  |   ||| ||||||||||||||||||| |||||||||  ||| ||| |||| ||||||||  |||| |     
T  44648076 gatcctctccatttgacaaaataaatggagttttgcaagttggagagagatagacacaaaaaatagatggtggatccgaccactaagtgggtctccctcc 44647977  T
Q  245 atcattaattattttttac 263  Q
    |||||||||||| ||||||    
T  44647976 atcattaattatattttac 44647958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 18198377 - 18198248
Alignment:
Q  138 aggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtggg 237  Q
    |||||| | |||||||| ||||||  ||||||||||||  |   ||| ||||||| | ||||||||| |||||||||  ||||| || ||| |||||| |    
T  18198377 aggggtgaagatcctctccatttggcaaaataaatggagttttgcaaattggagataaatagacacaaaaaatagatggtgggttctgccactaagtgag 18198278  T
Q  238 tcccactatcattaattattttttactttt 267  Q
    |||||| |||||||||||| ||||| ||||    
T  18198277 tcccaccatcattaattatattttattttt 18198248  T

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Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 19889032 - 19889117
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||| || ||||||||| ||| ||||||  |  ||||||||| || ||||||||| |||| |||||||||||||||||||||||    
T  19889032 caatttagaaagagatagatacaaaaaataagttgtgggtcctatcactaagtgggttccaccatcattaattattttttactttt 19889117  T

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Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 47226039 - 47226157
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| ||||||  |  ||||||| |||| ||| |||||||||| ||    
T  47226039 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaata--tggtgggtcccaccactaaatgggtcccaccat 47226136  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  47226137 cattaattatattttactttt 47226157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 11828945 - 11828992
Alignment:
Q  220 gtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||||    
T  11828945 gtcctaccattaagtgggttccaccatcattaattattttttattttt 11828992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 46802331 - 46802406
Alignment:
Q  184 atttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttt 259  Q
    |||| |||||||||||||| | ||||||||   |||||||||||| |||||||||||||| | | |||||||||||    
T  46802331 atttagagagagatagacataaaaaatagacggtgggtcctaccactaagtgggtcccaccaccgttaattatttt 46802406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 34985943 - 34986029
Alignment:
Q  182 caatttggagagagatagacacataa-aatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||||||| || |||||||  ||||||  |||| ||| || ||||||  |||||||||||||||||| ||||    
T  34985943 caatttggagagagatagacacaaaagaatagatggtgggtcaaaccactaaatgagtcccatcatcattaattattttttattttt 34986029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 5463867 - 5463934
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagata 215  Q
    |||||||| ||||||||| |||||||  | ||| |||||||||||||| ||| ||||||||||||||||    
T  5463867 gatcctctccatttgatataataaatata-gtatacaatttggagagatataaacacataaaatagata 5463934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 19027680 - 19027751
Alignment:
Q  181 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 251  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  19027680 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 19027751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 20726956 - 20726885
Alignment:
Q  181 acaatttggagagagatagacac-ataaaatagataatgggtcctaccattaagtgggtcccactatcatta 251  Q
    ||||||||||||||||||||||| | |||||| ||  ||||||||| || ||||||| |||||| |||||||    
T  20726956 acaatttggagagagatagacacaaaaaaataaatggtgggtcctatcactaagtggatcccaccatcatta 20726885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 30153144 - 30153257
Alignment:
Q  145 aggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccact 244  Q
    |||||||||| ||||| | |||| |||||||| ||  ||||||| |||||||||||| |||| ||| ||||||| |  ||| || |||||| || | ||     
T  30153144 aggatcctctccatttaacaaaacaaatggaa-tatgcaatttgaagagagatagacgcatataattgataatgagctctagcactaagtgagtactacc 30153242  T
Q  245 atcattaattatttt 259  Q
    |||||||||||||||    
T  30153243 atcattaattatttt 30153257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 44390900 - 44390835
Alignment:
Q  136 agaggggttaggatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagaca 202  Q
    |||||||||| |||||||| |||||   |||||||||||||| |  |||||||||||||||||||||    
T  44390900 agaggggttaagatcctctccatttataaaaataaatggaag-atgcaatttggagagagatagaca 44390835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 18064643 - 18064588
Alignment:
Q  169 aaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctac 226  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| | || |||||||    
T  18064643 aaatggaa-tacacaatt-ggagagagatagacacataaaatagacagtgagtcctac 18064588  T

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Target: scaffold0012 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 267
Target Start/End: Complemental strand, 208175 - 208055
Alignment:
Q  147 gatcctcttcatttgataaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactat 246  Q
    |||||||| ||||||  ||||||||||||  |   ||| ||||||||||||| ||||| |||||||||  |||||||||||| |||||||||||||  ||    
T  208175 gatcctctccatttggcaaaataaatggagttttgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtcccatcat 208076  T
Q  247 cattaattattttttactttt 267  Q
    |||||||||| ||||||||||    
T  208075 cattaattatattttactttt 208055  T

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Target: scaffold0062 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 262
Target Start/End: Complemental strand, 58774 - 58677
Alignment:
Q  164 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattatttttta 262  Q
    ||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||| |||  ||||||||||| ||||||    
T  58774 aaaataaatggaa-tatgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaattacttttta 58677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 267
Target Start/End: Complemental strand, 70885 - 70783
Alignment:
Q  164 aaaataaatggaagtacacaatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttac 263  Q
    ||||||||||||| ||  ||||||||| ||||||| ||| |||||||||||| |   |||||||||||| ||||| |||| ||||||||||  |||||||    
T  70885 aaaataaatggaa-tatgcaatttggaaagagataaacatataaaatagatagtttatcctaccattaaatgggttccaccatcattaattcctttttac 70787  T
Q  264 tttt 267  Q
    ||||    
T  70786 tttt 70783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 267
Target Start/End: Complemental strand, 7220 - 7139
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| |||||||||  |||||||||| ||||||||||| |||| |||||||||||| ||||| ||||    
T  7220 ttggagagagatagacacaaaaaatagatggtgggtcctactattaagtgggttccaccatcattaattatattttattttt 7139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 267
Target Start/End: Original strand, 29567 - 29652
Alignment:
Q  182 caatttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||| |||||||||||| ||||||||||| |||| ||||||| ||||| ||| |||||||||||||||||||  ||||||||||    
T  29567 caatttagagagagatagagacataaaataggtaataggtcctagcattacgtgagtcccactatcattaattacattttactttt 29652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 17311 - 17389
Alignment:
Q  189 gagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    |||||||||||||||| ||||||  |  ||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  17311 gagagagatagacacaaaaaataagtgctgggtcctatcactaagtgggtcccaccatcattaattattttttactttt 17389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 16399 - 16480
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||  |||||||||||| ||||| ||||    
T  16399 ttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtcccatcatcattaattatattttattttt 16480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 22450 - 22525
Alignment:
Q  192 agagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||||||||||| |||||||||| ||| |||||||| |||||| || |||| || ||||||||| ||||||||||    
T  22450 agagatagacacaaaaaatagatagtggatcctaccactaagtgagttccacaataattaattatattttactttt 22525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 9203 - 9273
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattat 256  Q
    ||||||||||||||||||| |||||||||  ||||||| |||| ||||||| | |||| ||||||||||||    
T  9203 ttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggattccaccatcattaattat 9273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 6437 - 6518
Alignment:
Q  186 ttggagagagatagacacataaaatagataatgggtcctaccattaagtgggtcccactatcattaattattttttactttt 267  Q
    ||||| ||||| ||||||| |||||||||  |||||||||| | ||| ||||| | || |||||||||||| ||||||||||    
T  6437 ttggaaagagacagacacaaaaaatagatggtgggtcctacaactaaatgggtacaaccatcattaattatattttactttt 6518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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