View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6594_low_70 (Length: 260)
Name: NF6594_low_70
Description: NF6594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6594_low_70 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 26860481 - 26860727
Alignment:
| Q |
1 |
ttttgatgggggtagtttaaccgctaaaaaacaatttttatagcaatataaaatctaaagtaaacacaagaaatcaaaacaaattacataaatataaggg |
100 |
Q |
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| T |
26860481 |
ttttgatgggggtagtttaaccgctaaaaaacaatttttatagcaatacaaaatctaaaataaacacaagaaatcaaaacaaat-acataaatataaggg |
26860579 |
T |
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| Q |
101 |
tcaaaaactttgaatctatttgaaaattttacaataattaatacgctaaatgtgaagaaaggtgattactgacttttatatgaatcttatctttgctata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
26860580 |
tcaaaaactttgaatctatttgaaaattttacaataattaatacgctaaatgtgaagaaaggtgattactgacttttatatgaatcatatctttgctata |
26860679 |
T |
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| Q |
201 |
tgccatttattttgacaagactcttctagccacataatatcgaatatt |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26860680 |
tgccatttattttgacaagactcttctagccacataatatcgaatatt |
26860727 |
T |
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