View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6594_low_73 (Length: 254)
Name: NF6594_low_73
Description: NF6594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6594_low_73 |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 33788639 - 33788874
Alignment:
| Q |
1 |
tgtttttgtttgtagtttccaccgacaaattcaatggctcgcacacagcagcttttcctttccttgattcagtgtcccttgaaatattcctgaacactat |
100 |
Q |
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| T |
33788639 |
tgtttttgtttgtagtttccaccgacaaattcaatggctcgcacacagcagcttttcctttccttgattcagtgtcccttgaaatattcctgaacactat |
33788738 |
T |
|
| Q |
101 |
tttctgactagatgattctggttttgacgaattttgctaatgatcatgcattaaagcacattgtaaggatctttcaaaacaaaaattgaagacaacagga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33788739 |
tttctgactagatgattctggttttgacgaattttgctaatgatcatgcattaaagcacattgtaaggatctttcaaaacaaaaattgaagacaacagga |
33788838 |
T |
|
| Q |
201 |
ataaaataatattagtttcgtaaagtatatgacact |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
33788839 |
ataaaataatattagtttcgtaaagtatatgacact |
33788874 |
T |
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