View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6594_low_9 (Length: 635)
Name: NF6594_low_9
Description: NF6594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6594_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 525; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 525; E-Value: 0
Query Start/End: Original strand, 1 - 611
Target Start/End: Complemental strand, 10427030 - 10426419
Alignment:
| Q |
1 |
ctttgcattgaaccccataatgtaatcagcatgagcatagtctttgacaaattgaatacttctcttatcaacatcatggaacttgagtctatcaagtaaa |
100 |
Q |
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| T |
10427030 |
ctttgcattgaaccccataatgtaatcagcatgagcatagtctttgacaaattgaatacttctcttatcaacatcatggaacttgagcctatcaagtaaa |
10426931 |
T |
|
| Q |
101 |
ttctcaacatcacgaacatcagaaagtgcatcttgtcctccatagctaatgaagagaggtagatcatgtggaatgttggataggttatatattggtggta |
200 |
Q |
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| T |
10426930 |
ttctcaacatcacgaacatcagaaagtgcatcttgtcctccatagctaatgaagagaggtagatcatgtggaatgttggataggttatatattggtggga |
10426831 |
T |
|
| Q |
201 |
atatttctccatagttcataatgttataatctggtcttacataattgaattttgctaaaaccccatgtctaacaactacatagttatnnnnnnnnn-tat |
299 |
Q |
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| T |
10426830 |
atatttctccatagtgcataatgttataatctggtcttacataattgaattttgctaaaaccccatgtctaacaactgcatagttataaaaaaaaaatat |
10426731 |
T |
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| Q |
300 |
cataatgtaagtaccttctatactttcttcgatgtttttcctttcaatcggttgaaatttgaggagggagttatcagggcacatctgtcggtttcaaccg |
399 |
Q |
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| T |
10426730 |
cataatgttagtaccatctataccttcttcgatgtttttcctttcaatcggttgaaatttgaggagggagttatcagggcacatatgtcggtttcaaccg |
10426631 |
T |
|
| Q |
400 |
attgaaagaaaaaacatcaatttatagaaatccaattgtgattggaatattttaagggaaactcttactttgggccaagtgcaccatgttctttgttgat |
499 |
Q |
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| T |
10426630 |
attgaaagaaaaaacatcaatttatagaaacccaattgtgattggaatattttaagggaaactcttactttgggccaagtgcaccatgttctttgttgat |
10426531 |
T |
|
| Q |
500 |
gttgattgaggttcattcatcaagaatcgttcaacagttgaagaattgagacaacaatttttacctgaattggtgacatttacgtataaaatcagaaaat |
599 |
Q |
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| T |
10426530 |
gttgattgaggttcattcatcaagaatcgttcaacagttgaagaattaaggcaacaatttttacctgaattggtggcatttacgtataaagtcagaaaat |
10426431 |
T |
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| Q |
600 |
taatatagtata |
611 |
Q |
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| T |
10426430 |
taatatagtata |
10426419 |
T |
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