View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6596_high_1 (Length: 878)

Name: NF6596_high_1
Description: NF6596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6596_high_1
NF6596_high_1
[»] chr6 (108 HSPs)
chr6 (25-878)||(26850884-26851736)
chr6 (338-878)||(26951992-26952529)
chr6 (98-878)||(27662397-27663161)
chr6 (561-878)||(25513090-25513407)
chr6 (562-878)||(25581922-25582238)
chr6 (114-531)||(26638123-26638526)
chr6 (114-531)||(26744089-26744492)
chr6 (562-878)||(26058122-26058438)
chr6 (562-878)||(26078092-26078408)
chr6 (562-878)||(25547183-25547499)
chr6 (553-810)||(25076134-25076391)
chr6 (562-878)||(28794624-28794940)
chr6 (556-811)||(26886388-26886646)
chr6 (562-878)||(27675206-27675525)
chr6 (560-820)||(26863881-26864141)
chr6 (302-531)||(26886830-26887055)
chr6 (562-808)||(26145282-26145528)
chr6 (562-811)||(26826105-26826354)
chr6 (562-751)||(26979752-26979941)
chr6 (431-531)||(26961832-26961932)
chr6 (562-810)||(28788668-28788916)
chr6 (562-878)||(31286791-31287107)
chr6 (631-878)||(27528973-27529220)
chr6 (357-531)||(26805222-26805396)
chr6 (526-852)||(27425189-27425515)
chr6 (562-878)||(26648697-26649013)
chr6 (562-878)||(26754665-26754981)
chr6 (562-751)||(26961453-26961642)
chr6 (634-878)||(27602424-27602668)
chr6 (631-878)||(26658194-26658441)
chr6 (631-878)||(26764165-26764412)
chr6 (357-531)||(26625853-26626027)
chr6 (357-531)||(26731830-26732004)
chr6 (98-256)||(27715525-27715683)
chr6 (562-878)||(27590612-27590928)
chr6 (357-531)||(25076614-25076788)
chr6 (562-878)||(26804731-26805047)
chr6 (101-200)||(28795423-28795522)
chr6 (361-531)||(27674846-27675016)
chr6 (357-449)||(25491409-25491501)
chr6 (99-256)||(26805499-26805656)
chr6 (114-207)||(26952631-26952724)
chr6 (315-531)||(27601951-27602165)
chr6 (562-878)||(27681199-27681515)
chr6 (431-531)||(26980130-26980230)
chr6 (562-878)||(27716129-27716445)
chr6 (695-878)||(26145068-26145251)
chr6 (125-200)||(28789399-28789474)
chr6 (357-524)||(28795137-28795304)
chr6 (562-878)||(27608749-27609065)
chr6 (51-217)||(26649488-26649660)
chr6 (51-217)||(26755456-26755628)
chr6 (361-463)||(27681746-27681848)
chr6 (114-215)||(27590170-27590271)
chr6 (338-531)||(26649197-26649387)
chr6 (338-531)||(26755165-26755355)
chr6 (562-666)||(27696220-27696324)
chr6 (96-220)||(26887805-26887926)
chr6 (562-664)||(27703846-27703948)
chr6 (361-462)||(27608392-27608493)
chr6 (99-200)||(27695596-27695697)
chr6 (565-665)||(25485409-25485509)
chr6 (101-284)||(26658925-26659107)
chr6 (101-284)||(26764896-26765078)
chr6 (101-257)||(26962074-26962230)
chr6 (114-200)||(25077046-25077132)
chr6 (123-250)||(26876543-26876670)
chr6 (724-878)||(25485262-25485416)
chr6 (119-200)||(26626162-26626246)
chr6 (119-200)||(26732139-26732223)
chr6 (114-200)||(27674599-27674685)
chr6 (102-256)||(27681934-27682088)
chr6 (357-529)||(25547703-25547875)
chr6 (123-200)||(26826914-26826991)
chr6 (99-200)||(27608136-27608237)
chr6 (357-481)||(28789156-28789280)
chr6 (114-209)||(31287608-31287706)
chr6 (108-209)||(26061590-26061689)
chr6 (108-209)||(26081560-26081659)
chr6 (431-531)||(26658703-26658803)
chr6 (431-531)||(26764674-26764774)
chr6 (114-198)||(27074278-27074362)
chr6 (126-200)||(27657793-27657868)
chr6 (765-878)||(28788503-28788616)
chr6 (691-808)||(26637841-26637958)
chr6 (691-808)||(26743807-26743924)
chr6 (357-408)||(27695859-27695910)
chr6 (357-463)||(26826678-26826784)
chr6 (125-163)||(27528708-27528746)
chr6 (493-531)||(27608524-27608562)
chr6 (493-531)||(27715904-27715942)
chr6 (357-529)||(25485713-25485885)
chr6 (357-402)||(25513725-25513770)
chr6 (357-402)||(25582557-25582602)
chr6 (357-402)||(26058769-26058814)
chr6 (357-402)||(26078739-26078784)
chr6 (357-402)||(26145847-26145892)
chr6 (360-456)||(28239207-28239303)
chr6 (360-456)||(28246188-28246284)
chr6 (114-197)||(25491190-25491273)
chr6 (357-404)||(27590394-27590441)
chr6 (493-548)||(27681661-27681716)
chr6 (357-404)||(31287427-31287474)
chr6 (493-531)||(27695995-27696033)
chr6 (428-462)||(27715839-27715873)
chr6 (492-529)||(26145720-26145757)
chr6 (176-257)||(26808439-26808520)
chr6 (765-878)||(27704049-27704162)
[»] chr1 (11 HSPs)
chr1 (561-878)||(265959-266276)
chr1 (553-878)||(28125313-28125638)
chr1 (553-864)||(26138163-26138474)
chr1 (552-852)||(28130343-28130650)
chr1 (102-215)||(265354-265467)
chr1 (355-531)||(26138721-26138897)
chr1 (324-531)||(28124865-28125066)
chr1 (357-463)||(265599-265705)
chr1 (122-219)||(28124680-28124777)
chr1 (122-219)||(28129711-28129808)
chr1 (493-531)||(265735-265773)
[»] chr4 (22 HSPs)
chr4 (100-531)||(18696477-18696890)
chr4 (313-548)||(18686881-18687113)
chr4 (621-878)||(18677284-18677541)
chr4 (621-878)||(18729220-18729477)
chr4 (100-463)||(18676628-18676979)
chr4 (100-405)||(18652546-18652839)
chr4 (313-463)||(18721346-18721493)
chr4 (526-852)||(18076040-18076366)
chr4 (633-878)||(18721810-18722055)
chr4 (621-811)||(18653202-18653392)
chr4 (621-811)||(18697127-18697317)
chr4 (621-878)||(18687339-18687596)
chr4 (102-463)||(18728569-18728915)
chr4 (100-199)||(18721142-18721241)
chr4 (313-463)||(18726266-18726412)
chr4 (100-199)||(18686671-18686770)
chr4 (313-405)||(18682034-18682123)
chr4 (100-159)||(18700970-18701029)
chr4 (498-548)||(18682171-18682221)
chr4 (498-548)||(18726447-18726497)
chr4 (498-548)||(18677014-18677064)
chr4 (498-531)||(18728950-18728983)
[»] scaffold0277 (6 HSPs)
scaffold0277 (562-878)||(11283-11599)
scaffold0277 (561-878)||(2319-2636)
scaffold0277 (125-200)||(1759-1834)
scaffold0277 (357-524)||(1956-2123)
scaffold0277 (125-200)||(10725-10800)
scaffold0277 (357-481)||(10919-11043)
[»] chr2 (3 HSPs)
chr2 (567-811)||(17990853-17991097)
chr2 (108-206)||(17990171-17990269)
chr2 (357-463)||(17990415-17990521)
[»] scaffold0003 (1 HSPs)
scaffold0003 (526-852)||(61848-62174)
[»] chr8 (6 HSPs)
chr8 (357-531)||(22023997-22024171)
chr8 (99-200)||(29270862-29270963)
chr8 (561-664)||(22023706-22023809)
chr8 (562-864)||(29271468-29271770)
chr8 (361-463)||(29271111-29271213)
chr8 (493-531)||(29271243-29271281)
[»] scaffold0349 (4 HSPs)
scaffold0349 (98-256)||(16262-16420)
scaffold0349 (562-878)||(15500-15816)
scaffold0349 (493-531)||(16003-16041)
scaffold0349 (428-462)||(16072-16106)
[»] scaffold0419 (3 HSPs)
scaffold0419 (552-878)||(9750-10076)
scaffold0419 (357-524)||(10263-10430)
scaffold0419 (125-200)||(10549-10624)
[»] scaffold1870 (1 HSPs)
scaffold1870 (632-878)||(1031-1277)
[»] scaffold0038 (2 HSPs)
scaffold0038 (360-456)||(39369-39465)
scaffold0038 (360-456)||(46350-46446)
[»] scaffold0019 (1 HSPs)
scaffold0019 (389-456)||(55513-55580)


Alignment Details
Target: chr6 (Bit Score: 759; Significance: 0; HSPs: 108)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 759; E-Value: 0
Query Start/End: Original strand, 25 - 878
Target Start/End: Complemental strand, 26851736 - 26850884
Alignment:
Q  25 acataatagaacaaacgatcagtaagagtaatttctttgccattgagaaacaagaatttttcatgtaccacatattccggaacaataataatacaagtta 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  26851736 acataatagaacaaacgatcagtaagagtaatttctttgccattgagaaacaagaatttttcatgtaccacataatccggaacaataataatacatgtta 26851637  T
Q  125 tagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcccttctgttccgcttggcaaaataat 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26851636 tagaagggatctttttacgaaaccagaaggaaattgtgttttccctgctttggtgctcgaaccaatctggaatcccttctgttccgcttggcaaaataat 26851537  T
Q  225 attgctacatccagcatcatgtagttgctgttacattagcaataaaatatagtattacacaataacattcttctacttgaataataaatgaaatactaca 324  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  26851536 attggtacatccagcgtcatgtagttgctgttacattagcaataaaatatattattacacaataacattcttctacttgaataataaatgaaatactata 26851437  T
Q  325 tat--caaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagaca 422  Q
    |||  ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26851436 tatatcaaatactactgcaagataaaacaat---aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagaca 26851340  T
Q  423 ggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcggg 522  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  26851339 ggtaatttagattcggtggaatccctctaatttcctcaagaaaattgcagccatacaatacaagctccctaagacggtgacattcactaaggcactcggg 26851240  T
Q  523 aagaatttttaaactgacaaatgatatgcttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactca 622  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26851239 aagaatttttaaattgacaaatgatatgcttaagtgacgaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacgatgtaactca 26851140  T
Q  623 atctcttctatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagg 722  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  26851139 atctcttctatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacctagataatatcaattccttaagagagggcaattgtaagg 26851040  T
Q  723 gtggaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaacc 822  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  26851039 gtggaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaca 26850940  T
Q  823 atgaaatgagagcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26850939 atgaaatgagagcttttctaaatttggaagtccagagacatcagatatatgggtta 26850884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 338 - 878
Target Start/End: Complemental strand, 26952529 - 26951992
Alignment:
Q  338 tgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcg 437  Q
    |||||||||||||||    |||||||||||||||||| ||||||||| |||| ||||||||| || | |||||||| |||||| ||    | ||||||||    
T  26952529 tgcaagataaaacaac---aacaaacctgactcaatagcattcttctacttgcggaactcaacgactcgcaatctactgcagaaagtctttctagattcg 26952433  T
Q  438 gtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttttaaact 537  Q
    ||||||||||||| |||||||||||  ||  |||| ||||||  | ||  ||   ||||||||| ||||||||||||||||||||||||||||| ||| |    
T  26952432 gtggaatccctctgatttcctcaagggaatagcagccatccacgataacttcaacaagatggtggcattcactaaggcactcgggaagaattttgaaatt 26952333  T
Q  538 gacaaatgatatgcttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatattt 637  Q
    | ||    ||||  ||||| ||| ||||||||||||||||  ||||||| ||||||||||||||||||| ||   || || |  |||||||| |||||||    
T  26952332 gtcactaaatattattaagcgacgaagttcactgagatttccaaatgaaaatggcaattctcctatggatgtttcatatatcgtaatctcttttatattt 26952233  T
Q  638 gtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaa 737  Q
    ||||||||||||||||||||||||||  |||||||||||  |||| |||| | ||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  26952232 gtcatcttgcataataattctggaaagctcttgagactctcacactcagagagtttcaattcctcaagagagggcaactgtaaggatggaaaactctcaa 26952133  T
Q  738 gcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagctt 837  Q
    |||  | |||   |   |||| |||||||| ||||||| | ||||||||||  |||||||||||||||||||| |||  |||||| ||||||||||  ||    
T  26952132 gctgctcgcagtactcggcatttaagattttaagtttatttaggtacccaaccgaattgtgaattgtaattaacctaacacaaccttgaaatgagaagtt 26952033  T
Q  838 ttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
    || |||||||||||| || |||||||| | |||||| ||||    
T  26952032 ttttaaatttggaagacctgagacatcgggtatatgagtta 26951992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 98 - 878
Target Start/End: Original strand, 27662397 - 27663161
Alignment:
Q  98 attccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgtttt---ccctgcttcggtgctcgaaccaatctgg 194  Q
    ||||||||| || ||||||||||||||||||||||||||||||||  |||||||| ||||||| ||| |   |||||  | | |||||||||||||||||    
T  27662397 attccggaataagaataatacaagttatagaagggatctttttacataaccagaaagaaattgagttgtgtcccctgacttgatgctcgaaccaatctgg 27662496  T
Q  195 aatcccttctgttccgcttggcaaaataatattgctacatccagcatcatgtagttgctgttacattagcaataaaatatagtattacacaataacattc 294  Q
    |||||| ||||||||| ||||||||| ||||||| | || |||||||| || ||| ||||||| ||||||| ||| ||| |||||| ||   |           
T  27662497 aatcccctctgttccggttggcaaaacaatattgttgcaaccagcatcgtgcagtcgctgttagattagca-taagatacagtatttcagtgt------- 27662588  T
Q  295 ttctacttgaataataaatgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaa 394  Q
            | |||||| ||||||||||| ||||||||||| | |||||||||||| ||    |||||||||||||||||||||||||||| |||||||||    
T  27662589 --------ggataatatatgaaatactaaatatcaaataccagtgcaagataaaataaa---aacaaacctgactcaataacattcttctacttgaggaa 27662677  T
Q  395 ctcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaa 494  Q
    ||||||||||| ||  ||  |||| | || |   ||||||| ||||||||||||||||||||||||||| |    |||| ||||||   ||| | |  ||    
T  27662678 ctcaatgatttacatccttctgcataaagatttgttagattgggtggaatccctctaatttcctcaagagactcacagtaatccaaataaagatgctcaa 27662777  T
Q  495 gatggtgacattcactaaggcactcgggaagaatttttaaactgacaaatgatatgcttaagtgacaaagttcactgagatttttaaatgaagatggcaa 594  Q
    ||| |||||||||||||||||||| |||||||||||| ||| |         |||   ||| |    ||||||| ||||||||||||||||| ||||||     
T  27662778 gatagtgacattcactaaggcacttgggaagaattttgaaatttttgtccattattactaacttttgaagttcattgagatttttaaatgaaaatggcat 27662877  T
Q  595 ttctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttc 694  Q
    |||| |||||||||||  |  ||||  |||||||| |||||||| ||||||||||||||||||||||||| |||||||||||  ||| | |   | || |    
T  27662878 ttcttctatggaagtatcacataaccaaatctcttttatatttgacatcttgcataataattctggaaaactcttgagactcctacaaaaatggagttcc 27662977  T
Q  695 aattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaat 794  Q
    |||| ||||||||| ||||    |||||||||||||||||  |||||  ||||       |||||||||||||||||||||   |||||||||| |||||    
T  27662978 aatttcttaagagacggcagacataagggtggaaaactcttgagcttcctgcacatggtcgcatctaagatttcaagtttataaaggtacccaactgaat 27663077  T
Q  795 tgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
    ||||||||||| ||||| | | ||||   |||||||||||| ||  ||| | |||||| || || ||||||| |||||| ||||    
T  27663078 tgtgaattgtagttaaatttttacaattttgaaatgagagccttattaattctggaagacctgaaacatcaggtatatgagtta 27663161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 561 - 878
Target Start/End: Complemental strand, 25513407 - 25513090
Alignment:
Q  561 aaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgg 660  Q
    |||||||||||| ||||| ||||||||||||||||||| |||||||||||  || || |||||| |||| ||||||||||||||| ||||||||||||||    
T  25513407 aaagttcactgaaattttgaaatgaagatggcaattcttctatggaagtatcatatatctcaatatcttttatatttgtcatcttacataataattctgg 25513308  T
Q  661 aaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatct 760  Q
    ||||||||||||||||  |||| |||| | ||  |||| ||||||||||||||  ||||||||||| |||  |||| | ||| ||||||| |||| || |    
T  25513307 aaaattcttgagactcttacacccagagatttcaaatttcttaagagagggcagctgtaagggtgggaaaagctcaggtttgctgcaaccacatgtattt 25513208  T
Q  761 aagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagaga 860  Q
    ||||||||||||||| | ||||  ||||| ||| ||||||||||||||||||||| ||||    ||||| ||| |||||||| ||||||||| || ||||    
T  25513207 aagatttcaagtttatttaggtgtccaatcgaaatgtgaattgtaattaaactatcacaatatcgaaataagaacttttctagatttggaagacccgaga 25513108  T
Q  861 catcagatatatgggtta 878  Q
    |||| | |||||||||||    
T  25513107 catcgggtatatgggtta 25513090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 562 - 878
Target Start/End: Complemental strand, 25582238 - 25581922
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||| ||||| ||||||| ||||||||||| |||||||| |   || || ||  || |||| ||||||| |||||||||||||||||||||||    
T  25582238 aagttcactgaaattttgaaatgaatatggcaattcttctatggaaatggcatatatcttgatatcttttatatttctcatcttgcataataattctgga 25582139  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    |||||||||||||||  ||||  ||| | ||  |||| ||||||||||||||  ||||||||||| |||  |||||| ||| |||||||  |||||| ||    
T  25582138 aaattcttgagactctcacacttagagatttcaaatttcttaagagagggcagctgtaagggtgggaaatgctcaagtttgctgcaaccatatgcattta 25582039  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagagac 861  Q
    |||||||||||||| | ||||  ||||| ||| ||||||||||||||||||||  ||||   |||||||||  |||||||| ||||||||| || |||||    
T  25582038 agatttcaagtttatttaggtgtccaatcgaactgtgaattgtaattaaactaaaacaaaattgaaatgagcacttttctagatttggaagacccgagac 25581939  T
Q  862 atcagatatatgggtta 878  Q
    ||| | |||||||||||    
T  25581938 atcgggtatatgggtta 25581922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 114 - 531
Target Start/End: Complemental strand, 26638526 - 26638123
Alignment:
Q  114 aatacaagttatagaagggatctttttacgaaaccagaaggaaattgtg---ttttccctgcttcggtgctcgaaccaatctggaatcccttctgttccg 210  Q
    |||| |||| ||||||||||||||||||||||||||||| |||||||||   | | |||||||| | ||||||||||||||||||||| | ||||||| |    
T  26638526 aatagaagtaatagaagggatctttttacgaaaccagaaagaaattgtgccatgtcccctgctttgatgctcgaaccaatctggaatctcctctgttctg 26638427  T
Q  211 cttggcaaaataatattgctacatccagcatcatgtagttgctgttacattagcaataaaatatagtattacacaataacattcttctacttgaataata 310  Q
     |||| |||  |||||   | |||||||| |||||||||| ||||||  |||| | ||| |||||   ||||||| || ||            |||| ||    
T  26638426 gttggaaaacgaatatcagtgcatccagcttcatgtagtttctgttagtttagta-taagatata---ttacacattatca------------aata-ta 26638344  T
Q  311 aatgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaat 410  Q
     ||||||||||| ||| |||||||||  ||||||||||||||  | |||||||||||||||||| | ||||||| ||||||||||||||||| | ||| |    
T  26638343 tatgaaatactatataacaaatactatggcaagataaaacaacaacaacaaacctgactcaatagccttcttctacttgaggaactcaatgaatcgcatt 26638244  T
Q  411 ctattgcagacaggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcact 510  Q
    | |||||||||| |||||||||||| |||||||||||||||||||| ||||||    |||| ||||||||   |||   ||||||| |||||||| ||||    
T  26638243 ccattgcagacaagtaatttagatttggtggaatccctctaatttcttcaagagccttgcattcatccaaattaaggatcctaagaaggtgacatacact 26638144  T
Q  511 aaggcactcgggaagaatttt 531  Q
    ||||||||| |||||||||||    
T  26638143 aaggcactcaggaagaatttt 26638123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 114 - 531
Target Start/End: Complemental strand, 26744492 - 26744089
Alignment:
Q  114 aatacaagttatagaagggatctttttacgaaaccagaaggaaattgtg---ttttccctgcttcggtgctcgaaccaatctggaatcccttctgttccg 210  Q
    |||| |||| ||||||||||||||||||||||||||||| |||||||||   | | |||||||| | ||||||||||||||||||||| | ||||||| |    
T  26744492 aatagaagtaatagaagggatctttttacgaaaccagaaagaaattgtgccatgtcccctgctttgatgctcgaaccaatctggaatctcctctgttctg 26744393  T
Q  211 cttggcaaaataatattgctacatccagcatcatgtagttgctgttacattagcaataaaatatagtattacacaataacattcttctacttgaataata 310  Q
     |||| |||  |||||   | |||||||| |||||||||| ||||||  |||| | ||| |||||   ||||||| || ||            |||| ||    
T  26744392 gttggaaaacgaatatcagtgcatccagcttcatgtagtttctgttagtttagta-taagatata---ttacacattatca------------aata-ta 26744310  T
Q  311 aatgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaat 410  Q
     ||||||||||| ||| |||||||||  ||||||||||||||  | |||||||||||||||||| | ||||||| ||||||||||||||||| | ||| |    
T  26744309 tatgaaatactatataacaaatactatggcaagataaaacaacaacaacaaacctgactcaatagccttcttctacttgaggaactcaatgaatcgcatt 26744210  T
Q  411 ctattgcagacaggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcact 510  Q
    | |||||||||| |||||||||||| |||||||||||||||||||| ||||||    |||| ||||||||   |||   ||||||| |||||||| ||||    
T  26744209 ccattgcagacaagtaatttagatttggtggaatccctctaatttcttcaagagccttgcattcatccaaattaaggatcctaagaaggtgacatacact 26744110  T
Q  511 aaggcactcgggaagaatttt 531  Q
    ||||||||| |||||||||||    
T  26744109 aaggcactcaggaagaatttt 26744089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 562 - 878
Target Start/End: Complemental strand, 26058438 - 26058122
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||| ||||| ||||| ||||||| ||||||||||| |||||||||||  || || |||||| |||| ||||||||||||||  |||||||||||||||    
T  26058438 aagtttactgaaattttgaaatgaatatggcaattcttctatggaagtatcatatatctcaatatcttttatatttgtcatctcacataataattctgga 26058339  T
Q  662 aaattcttgagactcgaacacacagataatttc-aattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatct 760  Q
    |||||||||||||||  |||  ||| | ||||| |||| ||||||||||||||  ||||||||||| |||  |||||| | | |||||||  ||| ||||    
T  26058338 aaattcttgagactcacacaatcag-tgatttcaaatttcttaagagagggcagctgtaagggtgggaaatgctcaagttcgctgcaaccaaatgtatct 26058240  T
Q  761 aagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagaga 860  Q
    ||||||||||||||| | || |  ||||| ||| |||||||| |||||||||||| ||| ||  |||| |||  |||||||| ||||||||| || ||||    
T  26058239 aagatttcaagtttatttagatgtccaatcgaactgtgaattttaattaaactatcacatcctcgaaaggagcacttttctagatttggaagacctgaga 26058140  T
Q  861 catcagatatatgggtta 878  Q
    |||| | |||||||||||    
T  26058139 catcgggtatatgggtta 26058122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 562 - 878
Target Start/End: Complemental strand, 26078408 - 26078092
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||| ||||| ||||| ||||||| ||||||||||| |||||||||||  || || |||||| |||| ||||||||||||||  |||||||||||||||    
T  26078408 aagtttactgaaattttgaaatgaatatggcaattcttctatggaagtatcatatatctcaatatcttttatatttgtcatctcacataataattctgga 26078309  T
Q  662 aaattcttgagactcgaacacacagataatttc-aattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatct 760  Q
    |||||||||||||||  |||  ||| | ||||| |||| ||||||||||||||  ||||||||||| |||  |||||| | | |||||||  ||| ||||    
T  26078308 aaattcttgagactcacacaatcag-tgatttcaaatttcttaagagagggcagctgtaagggtgggaaatgctcaagttcgctgcaaccaaatgtatct 26078210  T
Q  761 aagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagaga 860  Q
    ||||||||||||||| | || |  ||||| ||| |||||||| |||||||||||| ||| ||  |||| |||  |||||||| ||||||||| || ||||    
T  26078209 aagatttcaagtttatttagatgtccaatcgaactgtgaattttaattaaactatcacatcctcgaaaggagcacttttctagatttggaagacctgaga 26078110  T
Q  861 catcagatatatgggtta 878  Q
    |||| | |||||||||||    
T  26078109 catcgggtatatgggtta 26078092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 562 - 878
Target Start/End: Complemental strand, 25547499 - 25547183
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||| ||||| ||||||| | ||||||||| |||| ||||||  || || ||  || |||| |||||||||||||||||||||||||||||||    
T  25547499 aagttcactgaaattttgaaatgaatacggcaattcttctatagaagtatcatatatcttgatatcttttatatttgtcatcttgcataataattctgga 25547400  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    |||||||||||||||  |||   ||| | ||  |||| ||||||||||||||  ||||||||||| |||  ||||||||    ||||||  |||||| ||    
T  25547399 aaattcttgagactctcacaataagagatttcaaatttcttaagagagggcagctgtaagggtgggaaatgctcaagctctaagcaaccatatgcattta 25547300  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagagac 861  Q
    |||||||||||||| | ||||  ||||| ||| |||||||||||||||||||||||||  |  |||| |||  |||||||| |||| |||| || |||||    
T  25547299 agatttcaagtttatttaggtgtccaatcgaactgtgaattgtaattaaactatgacattctcgaaaggagcacttttctagatttcgaagacccgagac 25547200  T
Q  862 atcagatatatgggtta 878  Q
    ||||| |||||||||||    
T  25547199 atcaggtatatgggtta 25547183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 553 - 810
Target Start/End: Complemental strand, 25076391 - 25076134
Alignment:
Q  553 taagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaat-ctcttctatatttgtcatcttgcataa 651  Q
    ||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||||||  |  |||  ||| || ||| | ||||||||||||||| ||    
T  25076391 taagtcacgaagttcactgagattttgaaatgaaaatggcaattctcctatggaagtaccgtccaacaaaatacttttcaa-atttgtcatcttgcacaa 25076293  T
Q  652 taattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccc 751  Q
    ||||||||||||| ||||||||||| ||||| |||| | |||||||||||||||||||||||   |||||||||||||||| |  ||||| | |||   |    
T  25076292 taattctggaaaactcttgagactccaacactcagaaagtttcaattccttaagagagggcagccgtaagggtggaaaacttttgagcttatagcatttc 25076193  T
Q  752 catgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaa 810  Q
    | ||||| || ||||||||||||| | ||| | ||||||||||||||||||||||||||    
T  25076192 cttgcatttatgatttcaagtttacttaggcatccaattgaattgtgaattgtaattaa 25076134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 562 - 878
Target Start/End: Complemental strand, 28794940 - 28794624
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||  ||   |||||||||  ||||||||||||||||||||||||| ||||    
T  28794940 aagttcattgagattttgaaatgaagatggcaattctcctatggaagtataagatataccaatctctttgatatttgtcatcttgcataataattttgga 28794841  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    |||||||||||||||  ||| | ||| |  | |||||| |||||||| | |||   ||| ||||||||||  || |||||| |||||||  |||||  ||    
T  28794840 aaattcttgagactctcacaaaaagagagatccaattcgttaagagatgccaaccctaaaggtggaaaacgttcgagcttgctgcaaccatatgcactta 28794741  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatg-aaatgagagcttttctaaatttggaagtccagaga 860  Q
    |  ||||||||||| | ||||  ||||||||||||||||||||||||||  || |||||  ||| ||| |||| |||||| |||||| |||| || ||||    
T  28794740 acctttcaagtttatttaggtgtccaattgaattgtgaattgtaattaatttacgacaa-tatgcaaacgagaacttttccaaattttgaagacctgaga 28794642  T
Q  861 catcagatatatgggtta 878  Q
    |||||| |||||||||||    
T  28794641 catcaggtatatgggtta 28794624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 556 - 811
Target Start/End: Complemental strand, 26886646 - 26886388
Alignment:
Q  556 gtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagt---acaatgtaactcaatctcttctatatttgtcatcttgcataat 652  Q
    ||||| ||||||||||||||||| ||||||| |||||||| |||||||||||||   |  ||||||| ||||||||| || |||||||||||||||||||    
T  26886646 gtgacgaagttcactgagattttcaaatgaaaatggcaatcctcctatggaagtgttattatgtaacgcaatctcttttaaatttgtcatcttgcataat 26886547  T
Q  653 aattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaacccc 752  Q
    |||||||| || ||||||||||||  |||   ||| | ||  |||||||| ||||||||||  ||||||||||||||||||||||||||| ||||   |     
T  26886546 aattctgggaatttcttgagactcctacaataagagagttcaaattccttgagagagggcagctgtaagggtggaaaactctcaagcttgatgcatttct 26886447  T
Q  753 atgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaa 811  Q
      |||| |||||||||||||||| | || | |||||| |||| ||||||||||||||||    
T  26886446 tcgcatttaagatttcaagtttatttagcttcccaatcgaatcgtgaattgtaattaaa 26886388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 562 - 878
Target Start/End: Original strand, 27675206 - 27675525
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatgga---agtacaatgtaactcaatctcttctatatttgtcatcttgcataataattct 658  Q
    ||||||||||||||||| |||||||||||||||||||||||||||   | || ||| ||| ||||||||||  |||||||||||||||||||||||||||    
T  27675206 aagttcactgagattttgaaatgaagatggcaattctcctatggatatattataatctaaatcaatctctttgatatttgtcatcttgcataataattct 27675305  T
Q  659 ggaaaattcttgagactcgaaca--cacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgc 756  Q
    |||||| ||||||||||||||||   |||||||  | || |||||||||||| | |||   ||| ||||||||||  |  |||||  |||||||  ||||    
T  27675306 ggaaaactcttgagactcgaacaacaacagata--tccagttccttaagagatgccaaccctaaaggtggaaaacgtttgagctttctgcaaccaaatgc 27675403  T
Q  757 atctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtcca 856  Q
    |  |||  ||||||||||  | ||||  ||||| ||||||||||||||||||||| ||| |||||  | ||| || | |||||||||||||| ||| ||     
T  27675404 acttaacctttcaagtttgtttaggtgtccaatcgaattgtgaattgtaattaaattataacaacattcaaacgataacttttctaaatttgaaaggcct 27675503  T
Q  857 gagacatcagatatatgggtta 878  Q
    |||||||| | |||||| ||||    
T  27675504 gagacatcgggtatatgtgtta 27675525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 560 - 820
Target Start/End: Complemental strand, 26864141 - 26863881
Alignment:
Q  560 caaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctg 659  Q
    ||||||||||||||||||| ||||||| ||| |||||||| |||||||||   |   |||   ||||||| ||||||| |||||||||||||||||||||    
T  26864141 caaagttcactgagattttgaaatgaaaatgacaattctcttatggaagtttcagacaaccggatctcttttatatttatcatcttgcataataattctg 26864042  T
Q  660 gaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatc 759  Q
    ||||| ||||||| ||  ||||| || | | || ||||  ||||||||| | |||||||||||||||||||||||| |||||| |||||  |  ||||      
T  26864041 gaaaactcttgagtctgaaacactcatagagttccaatatcttaagagatgccaattgtaagggtggaaaactctcgagcttgctgcaatactttgcaat 26863942  T
Q  760 taagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaa 820  Q
    || | ||||||||||| | ||||||||||| || |||||||||||||||||| ||||||||    
T  26863941 tagggtttcaagtttatttaggtacccaatcgagttgtgaattgtaattaaattatgacaa 26863881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 302 - 531
Target Start/End: Complemental strand, 26887055 - 26886830
Alignment:
Q  302 tgaataataaatgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatg 401  Q
    ||||| ||| |||||| |||| ||||||||||||| ||||||||| |||||    |||||||||||||||||||||||||||| ||||||||||||||||    
T  26887055 tgaattatatatgaaa-actaaatatcaaatactattgcaagatagaacaaa---aacaaacctgactcaataacattcttctacttgaggaactcaatg 26886960  T
Q  402 atttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtg 501  Q
    | | ||| | ||| ||||| ||||  || ||||| ||||| ||||||||||||||||||||| |  |||| | || |||| ||||   ||||||| ||||    
T  26886959 aatggcattttatagcagaaaggtctttaagatttggtggtatccctctaatttcctcaagagacttgcaatgattcaattcaagtatcctaagaaggtg 26886860  T
Q  502 acattcactaaggcactcgggaagaatttt 531  Q
    ||||||  ||||||||||||||||||||||    
T  26886859 acattccttaaggcactcgggaagaatttt 26886830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 562 - 808
Target Start/End: Complemental strand, 26145528 - 26145282
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||| ||||| ||||||| || |||||||| |||||||||||  || || |||||| |||| ||||||||||||||| |||||||||||||||    
T  26145528 aagttcactgaaattttgaaatgaatatcgcaattcttctatggaagtatcatatatctcaatatcttttatatttgtcatcttacataataattctgga 26145429  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    |||||||||||||||  |||  |||| | ||  |||| ||||||||||||||  ||||||||||| |||  |||||| |||  ||||    ||| || ||    
T  26145428 aaattcttgagactctcacaaccagagatttcaaatttcttaagagagggcagctgtaagggtgggaaatgctcaagtttgaggcaattagatgtattta 26145329  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaatt 808  Q
    |||||||||||||| | ||||  ||||| || |||||||||||||||    
T  26145328 agatttcaagtttatttaggtgtccaatcgagttgtgaattgtaatt 26145282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 562 - 811
Target Start/End: Complemental strand, 26826354 - 26826105
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||  ||  ||   |||  ||| ||| ||||||||||  |||||||||| ||||    
T  26826354 aagttcattgagatttcgaaatgaagatggcaattctcctatggaagtatcatacaaacaaattccttttatttttgtcatctcacataataattttgga 26826255  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    ||| |||||||||||  |||  |||| | |||||| |||||||| ||||||||  ||||||||||||||||||| |||||| |||||  |  ||||| ||    
T  26826254 aaactcttgagactcttacagccagagagtttcaaatccttaagggagggcaaccgtaagggtggaaaactctcgagcttgctgcaattctctgcattta 26826155  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaa 811  Q
    ||||||||||||||   ||||||||||| ||  ||| |||||||||||||    
T  26826154 agatttcaagtttatctaggtacccaatcgagatgtcaattgtaattaaa 26826105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 562 - 751
Target Start/End: Complemental strand, 26979941 - 26979752
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    |||||||||||||| || ||||||| |||||||||||||||||||||||  |   ||| |||||| || ||||||| |||| |  |||||||||||||||    
T  26979941 aagttcactgagatattgaaatgaaaatggcaattctcctatggaagtattagagaacccaatcttttttatatttttcatttgacataataattctgga 26979842  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccc 751  Q
    ||| | ||||||||   |||| |||| | || ||||||||||||||||||||| |||||||||||||||||||| ||||||  |||||||    
T  26979841 aaacttttgagactatcacactcagagagttccaattccttaagagagggcaaatgtaagggtggaaaactctcgagcttgaggcaaccc 26979752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 431 - 531
Target Start/End: Complemental strand, 26961932 - 26961832
Alignment:
Q  431 agattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaattt 530  Q
    ||||| |||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  26961932 agatttggtggaatccctctaatttcctcaagaaacttgcagtcatccaacacaagctccccaagacggtgacattcactaaggcactcgggaagaattt 26961833  T
Q  531 t 531  Q
    |    
T  26961832 t 26961832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 562 - 810
Target Start/End: Complemental strand, 28788916 - 28788668
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||   || |||  ||||| ||  ||||||||||||||||||||||||| ||||    
T  28788916 aagttcactgagattttgaaatgaagatggcaattctcttatggaagtattctgcaaccaaatctttttaatatttgtcatcttgcataataattttgga 28788817  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    ||| |||||||||||  |||   ||| |  |||||||| ||||| || | |||   ||| ||||||||||| || || ||| ||||| |  |||||| ||    
T  28788816 aaactcttgagactcccacaatgagagagattcaattcattaagggatgccaaccctaaaggtggaaaactttcgagtttgctgcaatcaaatgcattta 28788717  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaa 810  Q
    |  ||||||||||| | ||||  ||||||||||||||||||||||||||    
T  28788716 acctttcaagtttatttaggtgtccaattgaattgtgaattgtaattaa 28788668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 562 - 878
Target Start/End: Complemental strand, 31287107 - 31286791
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||  |   |||  |||   || |||||||||||||||||||||||||||||||    
T  31287107 aagttcactgagattttgaaatgaagatggcaattctcctatggaagtattaacaaacaaaatacgttttatatttgtcatcttgcataataattctgga 31287008  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    ||| | |||||||||  ||| | ||| | || ||||||||||||||| | |||   |||||||||||||| ||  |||||| |||||||   ||||  ||    
T  31287007 aaactattgagactcacacaaaaagagagttccaattccttaagagatgccaaacctaagggtggaaaacgcttgagcttgctgcaaccaattgcactta 31286908  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagagac 861  Q
     || |||||||||| |  |||  |||||||||| || ||||||||||||| |   ||||   | |||||||| ||| |||| ||||| ||| || |||||    
T  31286907 tgaattcaagtttattttggtggccaattgaatcgtcaattgtaattaaatttctacaaaatttaaatgagaacttctctatatttgaaagacctgagac 31286808  T
Q  862 atcagatatatgggtta 878  Q
    ||||| |||||| ||||    
T  31286807 atcaggtatatgtgtta 31286791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 631 - 878
Target Start/End: Original strand, 27528973 - 27529220
Alignment:
Q  631 tatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaa 730  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  |||   ||| | || ||  | || |||||||||  | |||||||||||||||    
T  27528973 tatatttgtcatcttgcataataattctggaaaactcttgagactcttacaattagagagttccagattctgaagagagggagactgtaagggtggaaaa 27529072  T
Q  731 ctctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatg 830  Q
    ||||| ||||| | |||||||  ||||| ||||||||| | | || | ||||| | || ||||||||||||||||| |||| ||||||| |    ||| |    
T  27529073 ctctcgagcttctcgcaaccctctgcatttaagatttctaatctatttaggtatctaagtgaattgtgaattgtaactaaattatgacatcttacaaacg 27529172  T
Q  831 agagcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
    ||| |||||||||||||||||| || |||||||| | |||||||||||    
T  27529173 agaacttttctaaatttggaagccctgagacatccggtatatgggtta 27529220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 357 - 531
Target Start/End: Complemental strand, 26805396 - 26805222
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    ||||||||||||||| |||||||||||| ||||| |||||||||||||| ||  ||  |||||| || |  |||||||||||||||||||||||||||||    
T  26805396 aacaaacctgactcattaacattcttctacttgatgaactcaatgatttacatccttctgcagaaagctcttttagattcggtggaatccctctaatttc 26805297  T
Q  457 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||||| |  |||||| |  |||  |||| | | |||||||||||||||||||||| ||||| |||||||||||    
T  26805296 ctcaagagatgtgcagtaagacaaatcaagatgcttaagatggtgacattcactaagacactcaggaagaatttt 26805222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 526 - 852
Target Start/End: Original strand, 27425189 - 27425515
Alignment:
Q  526 aatttttaaactgacaaatgatatgcttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatc 625  Q
    |||||||||| || ||  ||||||  ||||||||| ||||||||| ||||||| ||| ||| |||| |||||||||||||||||    |  |||   ||     
T  27425189 aatttttaaattgtcacctgatattgttaagtgacgaagttcactaagattttgaaaggaaaatggaaattctcctatggaagtttccttcaacaagata 27425288  T
Q  626 tcttctatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtg 725  Q
      || |||||||||||||||||||||||||||||||||| |||||||||||  |||   ||| | || ||| | || |||||||||  | ||||||||||    
T  27425289 gattttatatttgtcatcttgcataataattctggaaaactcttgagactcttacaattagagagttccaaattctgaagagagggagactgtaagggtg 27425388  T
Q  726 gaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatg 825  Q
    |||||||||| ||||| | |||||||  ||||| ||||||||| | | || | ||||| | || ||||||||||||||||| |||| ||||||| |        
T  27425389 gaaaactctcgagcttctcgcaaccctctgcatttaagatttctaatctatttaggtatctaagtgaattgtgaattgtaactaaattatgacatcttgc 27425488  T
Q  826 aaatgagagcttttctaaatttggaag 852  Q
    ||| |||| ||||||||||||||||||    
T  27425489 aaacgagaacttttctaaatttggaag 27425515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 562 - 878
Target Start/End: Complemental strand, 26649013 - 26648697
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||| | |   ||   ||| | || ||||||| |||| ||||||||||||||||||    
T  26649013 aagttcactgagattatgaaatgaagatggcaattctcctattgaagttctagacaaaaaaatatgttttatatttctcattttgcataataattctgga 26648914  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    |||||||| ||||||  |||  ||   | || ||||| ||||||||| | |||   |||||||||||||| ||  |||||| ||||||  | ||||||||    
T  26648913 aaattctttagactctcacaaccactgagttccaattgcttaagagatgtcaaccctaagggtggaaaacgcttgagcttgctgcaacaacctgcatcta 26648814  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgac-aaccatgaaatgagagcttttctaaatttggaagtccagaga 860  Q
    || ||||||||||| | |||| ||||||||| | || ||||||||||||| | | || || ||| |||||||| ||||||||||||| ||||  | ||||    
T  26648813 agctttcaagtttatttaggtgcccaattgagtcgtcaattgtaattaaattcttacaaaacat-aaatgagaacttttctaaattttgaagatctgaga 26648715  T
Q  861 catcagatatatgggtta 878  Q
    |||||| |||||| ||||    
T  26648714 catcaggtatatgagtta 26648697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 562 - 878
Target Start/End: Complemental strand, 26754981 - 26754665
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||| | |   ||   ||| | || ||||||| |||| ||||||||||||||||||    
T  26754981 aagttcactgagattatgaaatgaagatggcaattctcctattgaagttctagacaaaaaaatatgttttatatttctcattttgcataataattctgga 26754882  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    |||||||| ||||||  |||  ||   | || ||||| ||||||||| | |||   |||||||||||||| ||  |||||| ||||||  | ||||||||    
T  26754881 aaattctttagactctcacaaccactgagttccaattgcttaagagatgtcaaccctaagggtggaaaacgcttgagcttgctgcaacaacctgcatcta 26754782  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgac-aaccatgaaatgagagcttttctaaatttggaagtccagaga 860  Q
    || ||||||||||| | |||| ||||||||| | || ||||||||||||| | | || || ||| |||||||| ||||||||||||| ||||  | ||||    
T  26754781 agctttcaagtttatttaggtgcccaattgagtcgtcaattgtaattaaattcttacaaaacat-aaatgagaacttttctaaattttgaagatctgaga 26754683  T
Q  861 catcagatatatgggtta 878  Q
    |||||| |||||| ||||    
T  26754682 catcaggtatatgagtta 26754665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 562 - 751
Target Start/End: Complemental strand, 26961642 - 26961453
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    |||||||||||||| || ||||||| |||| ||||||||||||||||||  |   |  | |||||||| |||||||||||| | ||||||||||||||||    
T  26961642 aagttcactgagatattgaaatgaaaatggaaattctcctatggaagtatcacaaagattaatctcttttatatttgtcatttggcataataattctgga 26961543  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccc 751  Q
    ||| | ||||||||   ||||  ||| | || ||||||||||||||||||||| |||||||||||||||||||| ||||||  |||||||    
T  26961542 aaacttttgagactatcacacttagagagttccaattccttaagagagggcaaatgtaagggtggaaaactctcgagcttgaggcaaccc 26961453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 634 - 878
Target Start/End: Original strand, 27602424 - 27602668
Alignment:
Q  634 atttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactc 733  Q
    ||||||||||||||||||||||||||||||| |||||||||||  |||||  |  | || ||||  ||||||| |||||| |||||| ||||||| ||||    
T  27602424 atttgtcatcttgcataataattctggaaaactcttgagactcttacacatggcgagttccaatctcttaagacagggcagttgtaaaggtggaacactc 27602523  T
Q  734 tcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgaga 833  Q
    |  |||||| |||||     ||||||||||||||||||| |  | ||| | |||| |||||||||||||||||||||| | | ||||   ||||| || |    
T  27602524 tggagcttgatgcaatattttgcatctaagatttcaagtctgtttaggaatccaactgaattgtgaattgtaattaaattctcacaaaattgaaacgata 27602623  T
Q  834 gcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
     ||||||||||||||||||||| |||||||| | ||| |||||||    
T  27602624 acttttctaaatttggaagtcctgagacatcgggtatttgggtta 27602668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 631 - 878
Target Start/End: Complemental strand, 26658441 - 26658194
Alignment:
Q  631 tatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaa 730  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||  ||||  |   | ||  ||||||||||||||||| |   ||||||||||||||    
T  26658441 tatatttgacatcttgcatagtaattctggaaatttcttgagactcttacaccaactgagttgaaattccttaagagagggaagccgtaagggtggaaaa 26658342  T
Q  731 ctctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatg 830  Q
    ||  | | |||  |||||||  ||||||||||||||||||||||| | ||||| |||| |||||||||||||||||||||| ||  ||||    ||||||    
T  26658341 cttacgatctttctgcaaccatatgcatctaagatttcaagtttatttaggtatccaactgaattgtgaattgtaattaaattagcacaatttcgaaatg 26658242  T
Q  831 agagcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
    ||| ||||||||||||||  || || |||||||  | |||||||||||    
T  26658241 agaacttttctaaatttgagagacctgagacattgggtatatgggtta 26658194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 631 - 878
Target Start/End: Complemental strand, 26764412 - 26764165
Alignment:
Q  631 tatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaa 730  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||  ||||  |   | ||  ||||||||||||||||| |   ||||||||||||||    
T  26764412 tatatttgacatcttgcatagtaattctggaaatttcttgagactcttacaccaactgagttgaaattccttaagagagggaagccgtaagggtggaaaa 26764313  T
Q  731 ctctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatg 830  Q
    ||  | | |||  |||||||  ||||||||||||||||||||||| | ||||| |||| |||||||||||||||||||||| ||  ||||    ||||||    
T  26764312 cttacgatctttctgcaaccatatgcatctaagatttcaagtttatttaggtatccaactgaattgtgaattgtaattaaattagcacaatttcgaaatg 26764213  T
Q  831 agagcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
    ||| ||||||||||||||  || || |||||||  | |||||||||||    
T  26764212 agaacttttctaaatttgagagacctgagacattgggtatatgggtta 26764165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 357 - 531
Target Start/End: Complemental strand, 26626027 - 26625853
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||  ||| ||  ||||||||| |||||||||||| ||||||||||||||||||||    
T  26626027 aacaaacctgacttaataacattcttctagttgaggaactcaatgataagcattccgttgcagacaagtaatttagatttggtggaatccctctaatttc 26625928  T
Q  457 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||||| |   |||| |||| ||   |||   ||||||| ||||||||||| ||||||| || |||||||||||    
T  26625927 ctcaagagactcgcagccatctaaattaaggatcctaagaaggtgacattcattaaggcattcaggaagaatttt 26625853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 357 - 531
Target Start/End: Complemental strand, 26732004 - 26731830
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||  ||| ||  ||||||||| |||||||||||| ||||||||||||||||||||    
T  26732004 aacaaacctgacttaataacattcttctagttgaggaactcaatgataagcattccgttgcagacaagtaatttagatttggtggaatccctctaatttc 26731905  T
Q  457 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||||| |   |||| |||| ||   |||   ||||||| ||||||||||| ||||||| || |||||||||||    
T  26731904 ctcaagagactcgcagccatctaaattaaggatcctaagaaggtgacattcattaaggcattcaggaagaatttt 26731830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 98 - 256
Target Start/End: Original strand, 27715525 - 27715683
Alignment:
Q  98 attccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaat 197  Q
    ||||||||| |||||| |||||||||||||||||||| | ||||||||||||||| |||||||||  | |||||||| ||||||| ||||||||||| ||    
T  27715525 attccggaaaaataattatacaagttatagaagggatttctttacgaaaccagaaagaaattgtgggtcccctgctttggtgctcaaaccaatctggtat 27715624  T
Q  198 cccttctgttccgcttggcaaaataatattgctacatccagcatcatgtagttgctgtt 256  Q
    ||| ||||||||| |||| ||  |||||| | | |||||||| | |||||||| |||||    
T  27715625 cccatctgttccgtttgggaatttaatataggtgcatccagcctgatgtagtttctgtt 27715683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 562 - 878
Target Start/End: Original strand, 27590612 - 27590928
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||| |    |||  |||||  |||||||||||||||||||||||||||| ||||    
T  27590612 aagttcactgagattttgaaatgaagatggcaattctcgtatggaagtataccaaaaccaaatcttgtctatatttgtcatcttgcataataattttgga 27590711  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    ||| | ||||||||  ||||   ||| |  |||||||| |||||||| | |||   ||| ||||||||||  |  ||| |  |||||||  |||||  ||    
T  27590712 aaacttttgagactataacaacaagaaagcttcaattctttaagagatgccaaccctaaaggtggaaaacgtttgagcgtcctgcaaccaaatgcactta 27590811  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagagac 861  Q
    |  ||||||||||| | ||||  ||||| ||||||||||||||||||||| | | ||||   | |||||| | |||||||||||||| ||| || |||||    
T  27590812 acctttcaagtttatttaggtgtccaatcgaattgtgaattgtaattaaattcttacaatattcaaatgataacttttctaaatttgaaagccctgagac 27590911  T
Q  862 atcagatatatgggtta 878  Q
    ||| | |||||| ||||    
T  27590912 atcgggtatatgtgtta 27590928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 357 - 531
Target Start/End: Complemental strand, 25076788 - 25076614
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||||||| ||||||||||||||| |||| |||| ||||||| |||||   ||||| ||||| | ||| |||||| |||||||||| |||||||||    
T  25076788 aacaaacctgacccaataacattcttctacttgtggaattcaatgaattgcatcttattgtagacaagcaatatagattgggtggaatccatctaatttc 25076689  T
Q  457 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 531  Q
     ||||||     ||| | |||||||  ||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  25076688 ttcaagagcccagcaataatccaatttaagatccttaagatggcgacattcactaaggcactcgggaagaatttt 25076614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 562 - 878
Target Start/End: Complemental strand, 26805047 - 26804731
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||| |||| |||  |||  |||    ||||| |||||||||| ||||||||||| ||||    
T  26805047 aagttcactcagattttgaaatgaagatagcaattctcctatgggagtataattcaaccaaatacagtctatgtttgtcatctcgcataataattttgga 26804948  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    ||| ||||||||||   |||   | |||  |||||||| |||||||| | |||   ||| ||||||||||  ||||||||| |||||||  |||||  ||    
T  26804947 aaactcttgagactatcacaacaacatagattcaattctttaagagatgccaaacctaaaggtggaaaacgttcaagcttgctgcaaccaaatgcactta 26804848  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagagac 861  Q
    |  ||||||||||| | ||||  ||||| ||||||| ||||||||||||| | | ||||   | ||| |||| ||||||||||||| |||| || ||||     
T  26804847 acctttcaagtttatttaggtgtccaatcgaattgtcaattgtaattaaattctcacaatatttaaacgagaacttttctaaattttgaagacctgagag 26804748  T
Q  862 atcagatatatgggtta 878  Q
    ||||| ||| |||||||    
T  26804747 atcaggtatgtgggtta 26804731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 101 - 200
Target Start/End: Complemental strand, 28795522 - 28795423
Alignment:
Q  101 ccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    |||||| || ||||||| || | ||||||||||||||||||| |||||||||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  28795522 ccggaaaaagaataatagaaataatagaagggatctttttacaaaaccagaaggaaattgtgtctcccctgctttggtgctcgaaccaatctggaatccc 28795423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 361 - 531
Target Start/End: Original strand, 27674846 - 27675016
Alignment:
Q  361 aacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctca 460  Q
    ||||||||||| |||||||||||| | |||||||||||||||||| || |    ||| || || |  || ||||| ||||||||||||||||||||||||    
T  27674846 aacctgactcattaacattcttctacatgaggaactcaatgatttacattgatatgcggaaagctctttaagatttggtggaatccctctaatttcctca 27674945  T
Q  461 agaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||| ||  ||||| || |||  |||| | | |||||||||||||||||||||||||||| |||||||||||    
T  27674946 agagaagagcagtaatgcaaaccaagatgcttaagatggtgacattcactaaggcactcaggaagaatttt 27675016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 357 - 449
Target Start/End: Original strand, 25491409 - 25491501
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct-attgcagacaggtaatttagattcggtggaatccctc 449  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| |||||||||||  |||||||||||||    
T  25491409 aacaaacctgactcaataacattcttctacttgaggaactcaatgatttgc-atctcattgcagacaagtaatttagatcaggtggaatccctc 25491501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 26805656 - 26805499
Alignment:
Q  99 ttccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatc 198  Q
    |||||||| ||||| |||||| |||||||||||||| | ||||||||||||||| |||||||||  | || ||||| ||||||| ||||||||||| |||    
T  26805656 ttccggaagaataaaaatacatgttatagaagggatttctttacgaaaccagaaagaaattgtgggtcccttgctttggtgctcaaaccaatctggtatc 26805557  T
Q  199 ccttctgttccgcttggcaaaataatattgctacatccagcatcatgtagttgctgtt 256  Q
    || ||||||||| |||| |||| || || | | |||  ||| ||||||||||||||||    
T  26805556 ccctctgttccgtttgggaaaacaaaataggtccattgagcctcatgtagttgctgtt 26805499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 26952724 - 26952631
Alignment:
Q  114 aatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcccttctgtt 207  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||| || ||||||| ||||||||||||||||| ||||||    
T  26952724 aatacaagttatagaagggatctttctacgaaaccagaaagaaattgtgtctcccctggtttggtgctcaaaccaatctggaatcccctctgtt 26952631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 315 - 531
Target Start/End: Original strand, 27601951 - 27602165
Alignment:
Q  315 aaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctat 414  Q
    ||||||||  |||||||||||||||||  |||||||||  |  ||||||||||||||||||||||||||| |||||||||||||||||||  || ||  |    
T  27601951 aaatactatctatcaaatactactgcacaataaaacaacaa--acaaacctgactcaataacattcttctacttgaggaactcaatgattcacagtcctt 27602048  T
Q  415 tgca-gacaggtaattt-agattcggtggaatccctctaatttcctcaagaaaaatgcagtcatcca-atacaagctccctaagatggtgacattcacta 511  Q
    |||| || |  || ||| ||||| ||||||| |||||||||||||||||||||  ||||| |||||| ||| ||  |   ||||| ||||||||||||||    
T  27602049 tgcatgaaa--tattttaagatttggtggaaaccctctaatttcctcaagaaacttgcagccatccacata-aatgtttttaagaaggtgacattcacta 27602145  T
Q  512 aggcactcgggaagaatttt 531  Q
    |||||||| |||||||||||    
T  27602146 aggcactcaggaagaatttt 27602165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 562 - 878
Target Start/End: Complemental strand, 27681515 - 27681199
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||||||  |  ||  |||||||||| ||||| || ||||||||||||||||||||||    
T  27681515 aagttcactgagattttgaaatgaaaatggcagttctcctatggaagtattagatatatcaatctcttttatatgtgccatcttgcataataattctgga 27681416  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    ||||| |  |||| |  |||| || | | | |||||| ||||||||| | |||   ||| ||| |||||   || |||||  |||||||  |||||  ||    
T  27681415 aaattatcaagacactcacactcatagagtatcaatttcttaagagatgccaaccctaaaggtcgaaaatgttcgagctttctgcaaccatatgcactta 27681316  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatg-aaatgagagcttttctaaatttggaagtccagaga 860  Q
    |   |||||||||| | ||||  ||||| ||||||||||||||||||||| ||| |||| |||| ||| || | |||||||||||||| ||| || ||||    
T  27681315 accattcaagtttatttaggtgtccaatagaattgtgaattgtaattaaattatcacaa-catgtaaacgataacttttctaaatttgaaaggcctgaga 27681217  T
Q  861 catcagatatatgggtta 878  Q
    |||| | |||||| ||||    
T  27681216 catcgggtatatgtgtta 27681199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 431 - 531
Target Start/End: Complemental strand, 26980230 - 26980130
Alignment:
Q  431 agattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaattt 530  Q
    ||||| ||||||| |||||||||||||||||||||  ||||| ||||||||||||||| || |||||||||||||||| |||||||||| || |||||||    
T  26980230 agatttggtggaaaccctctaatttcctcaagaaacttgcagccatccaatacaagctgccgaagatggtgacattcattaaggcactcaggtagaattt 26980131  T
Q  531 t 531  Q
    |    
T  26980130 t 26980130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 562 - 878
Target Start/End: Original strand, 27716129 - 27716445
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||| ||||||| ||||||| |||||| ||||||||||||||||  |   |||  ||| |  |||||||||||||||||||||||||||||||||    
T  27716129 aagttcactaagattttgaaatgaaaatggcagttctcctatggaagtattacacaaccaaatattgtctatatttgtcatcttgcataataattctgga 27716228  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    ||| |||||||||||   ||   |   |  ||||||||||||||||| | |||   ||| |||||||||   || | ||| ||||||||  |||||  ||    
T  27716229 aaactcttgagactcctgcaagaactgagattcaattccttaagagatgccaaacctaaaggtggaaaatgttcgaccttattgcaaccatatgcactta 27716328  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagagac 861  Q
    |  ||||||||||| | ||||  ||||| ||||||||||||||||||||| ||| ||| |  | ||| || | |||||||||||||| ||| || |||||    
T  27716329 acctttcaagtttattaaggtgtccaatcgaattgtgaattgtaattaaattataacatctttcaaacgataacttttctaaatttgaaaggcctgagac 27716428  T
Q  862 atcagatatatgggtta 878  Q
    ||| | |||||| ||||    
T  27716429 atcgggtatatgtgtta 27716445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 695 - 878
Target Start/End: Complemental strand, 26145251 - 26145068
Alignment:
Q  695 aattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaat 794  Q
    |||| |||||||||| |||  |||||||||||||||  |||||||||| |||||||  |||||| |||||||||||||||| | ||||  ||||| |||     
T  26145251 aatttcttaagagagagcagctgtaagggtggaaaatgctcaagcttgctgcaaccagatgcatttaagatttcaagtttatttaggtgtccaatcgaac 26145152  T
Q  795 tgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
    |||||||| |||||||||| | |||    ||||| |||  |||||||| ||||||||| || |||||||| | |||||||||||    
T  26145151 tgtgaattctaattaaactttcacagttttgaaaggagcacttttctagatttggaagacctgagacatcgggtatatgggtta 26145068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 28789474 - 28789399
Alignment:
Q  125 tagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||||||||||||||||||    
T  28789474 tagaagggatctttttacgaaaccagaaagaaattgtgtctcccctgctttggtgctcgaaccaatctggaatccc 28789399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 357 - 524
Target Start/End: Complemental strand, 28795304 - 28795137
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||  | |||||||| ||    |  ||||| ||||||||||||||||||||    
T  28795304 aacaaacctgactcaatagcattcttctacttgaggaactcaatgatttgcatcccattgcagaaagcctttcaagatttggtggaatccctctaatttc 28795205  T
Q  457 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaa 524  Q
    ||| ||| |  |||||| |||||||  ||| |   ||||| ||| |||||||||||||||||| ||||    
T  28795204 ctcgagagacttgcagttatccaatctaaggttattaagaaggtaacattcactaaggcactcaggaa 28795137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 562 - 878
Target Start/End: Original strand, 27608749 - 27609065
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||||||||| ||||||| |||||| ||||| ||||||||||| |   |||  ||| |  ||||| |||||||||||||||||||||||||||    
T  27608749 aagttcactgagattttgaaatgaaaatggcagttctcttatggaagtactaatcaacaaaatattgtctatctttgtcatcttgcataataattctgga 27608848  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    ||| | | |||||||  |||  ||   |  ||||||| ||||||||| | |||   ||| ||||||||||  || |||||  |||||||  |||||  ||    
T  27608849 aaactatcgagactctcacaaccactgagattcaatttcttaagagatgccaaacctaaaggtggaaaacgttcgagctttctgcaaccatatgcactta 27608948  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatg-aaatgagagcttttctaaatttggaagtccagaga 860  Q
    |   |||||||||| | ||||  ||||| ||||||||||||||||||||| ||| |||| |||| ||| || | |||||||||||||| ||| || ||||    
T  27608949 accattcaagtttatttaggtgtccaatagaattgtgaattgtaattaaattatcacaa-catgtaaacgataacttttctaaatttgaaaggcctgaga 27609047  T
Q  861 catcagatatatgggtta 878  Q
    |||| | |||||| ||||    
T  27609048 catcgggtatatgtgtta 27609065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 51 - 217
Target Start/End: Complemental strand, 26649660 - 26649488
Alignment:
Q  51 agtaatttctttgccattgagaaacaa---gaatttttcatgtaccacatattccggaacaataataatacaagttatagaagggatctttttacgaaac 147  Q
    ||||||||| ||| ||||||||||||    ||||||||||  | ||||| ||||||||| || ||| ||||| |||||||||||||| ||||||||||||    
T  26649660 agtaatttccttgtcattgagaaacacattgaatttttcaatttccacagattccggaataacaatgatacatgttatagaagggatatttttacgaaac 26649561  T
Q  148 cagaaggaaattgtgttttccct---gcttcggtgctcgaaccaatctggaatcccttctgttccgcttggca 217  Q
    || || |||||||||| | ||||   | || |||| |||||||||||||||||||| ||| ||||| ||||||    
T  26649560 caaaaagaaattgtgtctcccctaacgatttggtgttcgaaccaatctggaatcccctctattccgtttggca 26649488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 51 - 217
Target Start/End: Complemental strand, 26755628 - 26755456
Alignment:
Q  51 agtaatttctttgccattgagaaacaa---gaatttttcatgtaccacatattccggaacaataataatacaagttatagaagggatctttttacgaaac 147  Q
    ||||||||| ||| ||||||||||||    ||||||||||  | ||||| ||||||||| || ||| ||||| |||||||||||||| ||||||||||||    
T  26755628 agtaatttccttgtcattgagaaacacattgaatttttcaatttccacagattccggaataacaatgatacatgttatagaagggatatttttacgaaac 26755529  T
Q  148 cagaaggaaattgtgttttccct---gcttcggtgctcgaaccaatctggaatcccttctgttccgcttggca 217  Q
    || || |||||||||| | ||||   | || |||| |||||||||||||||||||| ||| ||||| ||||||    
T  26755528 caaaaagaaattgtgtctcccctaacgatttggtgttcgaaccaatctggaatcccctctattccgtttggca 26755456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 361 - 463
Target Start/End: Complemental strand, 27681848 - 27681746
Alignment:
Q  361 aacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctca 460  Q
    ||||||||||| |||||||||||| |||||||||||||||||||| |||| | | ||| | || |  |||||||| ||||||||||||||||||||||||    
T  27681848 aacctgactcattaacattcttctacttgaggaactcaatgatttacaatatctagcacaaagctcttttagatttggtggaatccctctaatttcctca 27681749  T
Q  461 aga 463  Q
    |||    
T  27681748 aga 27681746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 27590170 - 27590271
Alignment:
Q  114 aatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcccttctgttccgctt 213  Q
    |||| |||| ||||||||||| | ||||||||||||||| |||||||||| | |||||||| ||||||| ||||||||||| ||||| ||||||||| ||    
T  27590170 aatataagtcatagaagggatttctttacgaaaccagaaagaaattgtgtctcccctgctttggtgctcaaaccaatctggtatcccctctgttccgttt 27590269  T
Q  214 gg 215  Q
    ||    
T  27590270 gg 27590271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 338 - 531
Target Start/End: Complemental strand, 26649387 - 26649197
Alignment:
Q  338 tgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct-attgcagacaggtaatttagattc 436  Q
    |||||||||||||||    ||| |||||||||||||||||||||||| |||||||||||||||||||  | |||| | |||||| ||  | || |||||     
T  26649387 tgcaagataaaacaac---aacgaacctgactcaataacattcttctacttgaggaactcaatgattcac-atctcaatgcagaaagccatttaagattt 26649292  T
Q  437 ggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||||||||| ||||||||||||||| |  | ||| | ||||  | ||  ||   |||||||||||||||||||||| ||||||||||||||||    
T  26649291 ggtggaatccccctaatttcctcaagagaggtacagccgtccacgataatttcaacaagatggtgacattcactaaggaactcgggaagaatttt 26649197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 338 - 531
Target Start/End: Complemental strand, 26755355 - 26755165
Alignment:
Q  338 tgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct-attgcagacaggtaatttagattc 436  Q
    |||||||||||||||    ||| |||||||||||||||||||||||| |||||||||||||||||||  | |||| | |||||| ||  | || |||||     
T  26755355 tgcaagataaaacaac---aacgaacctgactcaataacattcttctacttgaggaactcaatgattcac-atctcaatgcagaaagccatttaagattt 26755260  T
Q  437 ggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||||||||| ||||||||||||||| |  | ||| | ||||  | ||  ||   |||||||||||||||||||||| ||||||||||||||||    
T  26755259 ggtggaatccccctaatttcctcaagagaggtacagccgtccacgataatttcaacaagatggtgacattcactaaggaactcgggaagaatttt 26755165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 562 - 666
Target Start/End: Original strand, 27696220 - 27696324
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||||||||| ||||||| |||||| || |||||||||| || ||  ||  |||||||||| ||||| || ||||||||||||||||||||||    
T  27696220 aagttcactgagattttgaaatgaaaatggcagttttcctatggaaatataaaatatatcaatctcttttatatgtgccatcttgcataataattctgga 27696319  T
Q  662 aaatt 666  Q
    |||||    
T  27696320 aaatt 27696324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 96 - 220
Target Start/End: Complemental strand, 26887926 - 26887805
Alignment:
Q  96 atattccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctgga 195  Q
    ||||||||| | || || |||||||||||||||   ||||| ||||||||||||||| |||| ||||| | |||||||| ||||||| ||||||||||||    
T  26887926 atattccgggataagaagaatacaagttataga---gatctctttacgaaaccagaaagaaagtgtgtgtcccctgctttggtgctcaaaccaatctgga 26887830  T
Q  196 atcccttctgttccgcttggcaaaa 220  Q
    ||||| ||| ||||| |||| ||||    
T  26887829 atcccctctcttccgtttgggaaaa 26887805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 562 - 664
Target Start/End: Original strand, 27703846 - 27703948
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||||||||| ||||||| |||||| ||||||||| ||||||   || |||  ||| |  |||||||||||||||||||||||||||||||||    
T  27703846 aagttcactgagattttgaaatgaaaatggcagttctcctatagaagtatgctgcaaccaaatattatctatatttgtcatcttgcataataattctgga 27703945  T
Q  662 aaa 664  Q
    |||    
T  27703946 aaa 27703948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 361 - 462
Target Start/End: Original strand, 27608392 - 27608493
Alignment:
Q  361 aacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctca 460  Q
    ||||||||||| |||| ||||| | ||||||||||||||||||||||| ||  ||||||| ||  | || ||||| ||||||||||||||||||||||||    
T  27608392 aacctgactcattaactttcttttacttgaggaactcaatgatttgcattcgcttgcagaaagccatttaagatttggtggaatccctctaatttcctca 27608491  T
Q  461 ag 462  Q
    ||    
T  27608492 ag 27608493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 27695596 - 27695697
Alignment:
Q  99 ttccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatc 198  Q
    |||||||| ||||| |||||||| |||||||||||| | |||| ||||||| || |||||||||| | |||||||| ||||||| ||||||||||| |||    
T  27695596 ttccggaagaataaaaatacaagatatagaagggatttctttatgaaaccaaaaagaaattgtgtctcccctgctttggtgctcaaaccaatctggtatc 27695695  T
Q  199 cc 200  Q
    ||    
T  27695696 cc 27695697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 565 - 665
Target Start/End: Complemental strand, 25485509 - 25485409
Alignment:
Q  565 ttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctggaaaa 664  Q
    |||||||| ||||| ||||||| ||||||||||| |||||||||||  || || || ||| |||| |||||||| |||||| ||||||||||||||||||    
T  25485509 ttcactgaaattttgaaatgaatatggcaattcttctatggaagtatcatatatcttaatatcttttatatttgacatcttacataataattctggaaaa 25485410  T
Q  665 t 665  Q
    |    
T  25485409 t 25485409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 101 - 284
Target Start/End: Complemental strand, 26659107 - 26658925
Alignment:
Q  101 ccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    |||||| || || ||||||| | ||||||||||||||||||||||||||||| |||| ||| | | ||||| || ||||||||||||||||||| ||||     
T  26659107 ccggaagaagaagaatacaaataatagaagggatctttttacgaaaccagaaagaaactgtttgtcccctgatttggtgctcgaaccaatctgggatcct 26659008  T
Q  201 ttctgttccgcttggcaaaataatattg-ctacatccagcatcatgtagttgctgttacattagcaataaaatatagtattacac 284  Q
     || |  ||| |||| |||||||||  |  |||||||||| |||||||||| ||||||  ||||| |||||||||| || |||||    
T  26659007 ctcagccccggttgg-aaaataataacgagtacatccagcctcatgtagtttctgttagtttagc-ataaaatatattactacac 26658925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 101 - 284
Target Start/End: Complemental strand, 26765078 - 26764896
Alignment:
Q  101 ccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    |||||| || || ||||||| | ||||||||||||||||||||||||||||| |||| ||| | | ||||| || ||||||||||||||||||| ||||     
T  26765078 ccggaagaagaagaatacaaataatagaagggatctttttacgaaaccagaaagaaactgtttgtcccctgatttggtgctcgaaccaatctgggatcct 26764979  T
Q  201 ttctgttccgcttggcaaaataatattg-ctacatccagcatcatgtagttgctgttacattagcaataaaatatagtattacac 284  Q
     || |  ||| |||| |||||||||  |  |||||||||| |||||||||| ||||||  ||||| |||||||||| || |||||    
T  26764978 ctcagccccggttgg-aaaataataacgagtacatccagcctcatgtagtttctgttagtttagc-ataaaatatattactacac 26764896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 101 - 257
Target Start/End: Complemental strand, 26962230 - 26962074
Alignment:
Q  101 ccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    |||| |||| || |||||| ||||||| |||||||||||| ||| ||||||| |||| ||||| | || | ||| ||||||| |||||||||||||||||    
T  26962230 ccgggacaagaaaaatacatgttatagtagggatctttttgcgataccagaaagaaaatgtgtctccctttctttggtgctcaaaccaatctggaatccc 26962131  T
Q  201 ttctgttccgcttggcaaaataatattgctacatccagcatcatgtagttgctgtta 257  Q
     ||  ||||| |||| ||| |||| ||| | |||||||| |||||||| | ||||||    
T  26962130 ctcacttccgtttgggaaactaatcttggtgcatccagcctcatgtaggtcctgtta 26962074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 25077132 - 25077046
Alignment:
Q  114 aatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgc-ttcggtgctcgaaccaatctggaatccc 200  Q
    ||||||||| ||||||||||||||||| ||||||||||| ||||||||| | ||||| | || |||||||||||||||||||||||||    
T  25077132 aatacaagtaatagaagggatctttttgcgaaaccagaaagaaattgtg-tctccctccatttggtgctcgaaccaatctggaatccc 25077046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 123 - 250
Target Start/End: Complemental strand, 26876670 - 26876543
Alignment:
Q  123 tatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcccttctgttccgcttggcaaaata 222  Q
    |||| ||||||||||||||||||||||||| |||||||| | | || || || |||| | |||||| ||||||||||| ||||||||| |||| | || |    
T  26876670 tataaaagggatctttttacgaaaccagaaagaaattgtttgtcccgtgatttggtgttggaaccagtctggaatcccctctgttccgtttgggagaaga 26876571  T
Q  223 atattgctacatccagcatcatgtagtt 250  Q
    |||| | | |||||||| ||||||||||    
T  26876570 atataggtgcatccagcctcatgtagtt 26876543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 724 - 878
Target Start/End: Complemental strand, 25485416 - 25485262
Alignment:
Q  724 tggaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaacca 823  Q
    |||||||  |||||| ||| |||||||  |||||| |||||||||||||||| | ||||  ||||| ||| || |||||||||||||||||  ||||       
T  25485416 tggaaaatgctcaagtttgctgcaaccatatgcatttaagatttcaagtttatttaggtgtccaatcgaactgggaattgtaattaaactaaaacaatat 25485317  T
Q  824 tgaaatgagagcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
     ||||||||  |||||||| ||||||||| || |||||||| | |||||||||||    
T  25485316 cgaaatgagcacttttctagatttggaagacccgagacatcgggtatatgggtta 25485262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 26626246 - 26626162
Alignment:
Q  119 aagttatagaagggatctttttacgaaaccagaaggaaattgtgtt---ttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||   | ||||| || | |||||||||||||||||||||||    
T  26626246 aagtaatagaagggatctttttacgaaaccagaaagaaattgtgttgtgtcccctgatttgatgctcgaaccaatctggaatccc 26626162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 26732223 - 26732139
Alignment:
Q  119 aagttatagaagggatctttttacgaaaccagaaggaaattgtgtt---ttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||   | ||||| || | |||||||||||||||||||||||    
T  26732223 aagtaatagaagggatctttttacgaaaccagaaagaaattgtgttgtgtcccctgatttgatgctcgaaccaatctggaatccc 26732139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 27674599 - 27674685
Alignment:
Q  114 aatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    |||| |||| ||||||||||| | ||||||||||||||| |||||||||| | |||||||| ||||||| ||||||||||| |||||    
T  27674599 aatataagtcatagaagggatttctttacgaaaccagaaagaaattgtgtctcccctgctttggtgctcaaaccaatctggtatccc 27674685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 27682088 - 27681934
Alignment:
Q  102 cggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatccct 201  Q
    ||||| |||||  ||||||||||| |||||||| | ||||||||||||||| |||||| ||  | |||||||| ||||||| ||||||||||| |||||     
T  27682088 cggaagaataaatatacaagttattgaagggatttctttacgaaaccagaaagaaattatgggtcccctgctttggtgctcaaaccaatctggtatcccc 27681989  T
Q  202 tctgttccgcttggcaaaataatattgctacatccagcatcatgtagttgctgtt 256  Q
    ||| ||||  |||| |||  ||| ||| | ||||| || |||||||||| |||||    
T  27681988 tctcttccatttgggaaataaatcttggtgcatcccgcctcatgtagtttctgtt 27681934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 357 - 529
Target Start/End: Complemental strand, 25547875 - 25547703
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    ||||||||||||||| |||||||||| | ||||||||||||||||| |  || ||   |||| | ||    |  ||||| ||||||||||||||||||||    
T  25547875 aacaaacctgactcattaacattcttatacttgaggaactcaatgaataacactcgtctgcaaaaagcctttcaagatttggtggaatccctctaatttc 25547776  T
Q  457 ctcaagaaaaatgcag-tcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatt 529  Q
    |||||||||| ||||| || || |||| ||| |   |||||||||||||||| ||||||||||| |||||||||    
T  25547775 ctcaagaaaattgcagttcttcaaata-aagttgtttaagatggtgacattcgctaaggcactcaggaagaatt 25547703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 26826991 - 26826914
Alignment:
Q  123 tatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    |||||||||||| ||||||||||||||||| |||||||||| | | |||||| ||||||| |||| ||||||||||||    
T  26826991 tatagaagggatttttttacgaaaccagaaagaaattgtgtctcctctgctttggtgctcaaaccgatctggaatccc 26826914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 27608136 - 27608237
Alignment:
Q  99 ttccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatc 198  Q
    |||||||| |||||  ||||||||||| |||||||| | ||||||||||||||| |||| ||||  | |||||||| ||||||| ||||||||||| |||    
T  27608136 ttccggaagaataaatatacaagttattgaagggatttctttacgaaaccagaaagaaagtgtgagtcccctgctttggtgctcaaaccaatctggtatc 27608235  T
Q  199 cc 200  Q
    ||    
T  27608236 cc 27608237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 357 - 481
Target Start/End: Complemental strand, 28789280 - 28789156
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||||||  | |||||||| ||       ||||| ||||||||||||||||||||    
T  28789280 aacaaacctgactcaatagcatttttctacttgaggaactcaatgatttgcatccgattgcagaaagccttgcaagatttggtggaatccctctaatttc 28789181  T
Q  457 ctcaagaaaaatgcagtcatccaat 481  Q
    ||| ||| |  |||||| |||||||    
T  28789180 ctccagagacttgcagttatccaat 28789156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 114 - 209
Target Start/End: Complemental strand, 31287706 - 31287608
Alignment:
Q  114 aatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgtttt---ccctgcttcggtgctcgaaccaatctggaatcccttctgttcc 209  Q
    |||| |||| ||||||||||||||||||||||||||||| | ||||||| |||   ||||| || ||||||| ||||||| ||||||||| ||||||||    
T  31287706 aatataagtaatagaagggatctttttacgaaaccagaaagtaattgtgctttgtcccctgatttggtgctcaaaccaatttggaatcccatctgttcc 31287608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 26061689 - 26061590
Alignment:
Q  108 aataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcccttctgtt 207  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||  ||||||||  | || || || ||||||  ||||||||||||||||| ||||||    
T  26061689 aataataatactagttatagaagggatttatttacgaaaccagaaaaaaattgtg--tcccgtgatttggtgctttaaccaatctggaatcccctctgtt 26061592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 26081659 - 26081560
Alignment:
Q  108 aataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcccttctgtt 207  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||  ||||||||  | || || || ||||||  ||||||||||||||||| ||||||    
T  26081659 aataataatactagttatagaagggatttatttacgaaaccagaaaaaaattgtg--tcccgtgatttggtgctttaaccaatctggaatcccctctgtt 26081562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 431 - 531
Target Start/End: Complemental strand, 26658803 - 26658703
Alignment:
Q  431 agattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaattt 530  Q
    |||||| |||||||||||||||||||||||||| |   ||| | ||||||   ||| | | ||||| ||||||||||||||||||||||||| |||||||    
T  26658803 agattctgtggaatccctctaatttcctcaagatattggcatttatccaaataaagatgcttaagaaggtgacattcactaaggcactcgggtagaattt 26658704  T
Q  531 t 531  Q
    |    
T  26658703 t 26658703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 431 - 531
Target Start/End: Complemental strand, 26764774 - 26764674
Alignment:
Q  431 agattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaattt 530  Q
    |||||| |||||||||||||||||||||||||| |   ||| | ||||||   ||| | | ||||| ||||||||||||||||||||||||| |||||||    
T  26764774 agattctgtggaatccctctaatttcctcaagatattggcatttatccaaataaagatgcttaagaaggtgacattcactaaggcactcgggtagaattt 26764675  T
Q  531 t 531  Q
    |    
T  26764674 t 26764674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 27074362 - 27074278
Alignment:
Q  114 aatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatc 198  Q
    |||||| ||||||| |||||||| ||||| |||||| || |||||||  ||| || ||||||||||||| |||||||||||||||    
T  27074362 aatacatgttatagtagggatctctttactaaaccaaaaagaaattgcatttcccatgcttcggtgctcaaaccaatctggaatc 27074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 27657793 - 27657868
Alignment:
Q  126 agaagggatctttttacgaaaccagaaggaaattgtgt-tttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    ||||||||||||||||||||||||||| |||||||| | |  ||||| || |||||||| ||||||||||||||||    
T  27657793 agaagggatctttttacgaaaccagaaagaaattgtatctccccctgatttggtgctcgtaccaatctggaatccc 27657868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 765 - 878
Target Start/End: Complemental strand, 28788616 - 28788503
Alignment:
Q  765 tttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatg-aaatgagagcttttctaaatttggaagtccagagacat 863  Q
    ||||||||||| | ||||  ||||||||||||||||||||||||||  || |||||  ||| ||| |||| |||||| |||||| |||| || |||||||    
T  28788616 tttcaagtttatttaggtgtccaattgaattgtgaattgtaattaatttacgacaa-tatgcaaacgagaacttttccaaattttgaagacctgagacat 28788518  T
Q  864 cagatatatgggtta 878  Q
    ||| |||||||||||    
T  28788517 caggtatatgggtta 28788503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 691 - 808
Target Start/End: Complemental strand, 26637958 - 26637841
Alignment:
Q  691 tttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaatt 790  Q
    ||||| || |||||||||||||||  ||||||||||||||||||| |||  |||||||     ||||| |||||||| ||||||| | || | ||||||     
T  26637958 tttcacttgcttaagagagggcaaccgtaagggtggaaaactctctagcgagttgcaattttttgcatttaagattttaagtttacttagctgcccaatc 26637859  T
Q  791 gaattgtgaattgtaatt 808  Q
    |||| |||||||||||||    
T  26637858 gaatcgtgaattgtaatt 26637841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 691 - 808
Target Start/End: Complemental strand, 26743924 - 26743807
Alignment:
Q  691 tttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaatt 790  Q
    ||||| || |||||||||||||||  ||||||||||||||||||| |||  |||||||     ||||| |||||||| ||||||| | || | ||||||     
T  26743924 tttcacttgcttaagagagggcaaccgtaagggtggaaaactctctagcgagttgcaattttttgcatttaagattttaagtttacttagctgcccaatc 26743825  T
Q  791 gaattgtgaattgtaatt 808  Q
    |||| |||||||||||||    
T  26743824 gaatcgtgaattgtaatt 26743807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 357 - 408
Target Start/End: Original strand, 27695859 - 27695910
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgca 408  Q
    ||||||||||||||| |||||||||||| | ||| |||||||||||||||||    
T  27695859 aacaaacctgactcattaacattcttctacatgatgaactcaatgatttgca 27695910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 463
Target Start/End: Complemental strand, 26826784 - 26826678
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||||| ||||||| ||||||| | |||||  ||||||||||||  ||  |||||||||| |  |  | |||||| ||||||||||||||||| ||    
T  26826784 aacaaacctggctcaatagcattcttatacttgataaactcaatgattcacatcctattgcagagaaattgtatagattgggtggaatccctctaatctc 26826685  T
Q  457 ctcaaga 463  Q
    |||||||    
T  26826684 ctcaaga 26826678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 27528708 - 27528746
Alignment:
Q  125 tagaagggatctttttacgaaaccagaaggaaattgtgt 163  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  27528708 tagaagggatctttttacgaaaccagaaagaaattgtgt 27528746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 493 - 531
Target Start/End: Original strand, 27608524 - 27608562
Alignment:
Q  493 aagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  27608524 aagatggtgacattcactaaggcactcaggaagaatttt 27608562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 493 - 531
Target Start/End: Original strand, 27715904 - 27715942
Alignment:
Q  493 aagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  27715904 aagatggtgacattcactaaggcactcaggaagaatttt 27715942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 529
Target Start/End: Complemental strand, 25485885 - 25485713
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    ||||||||||||||| |||||||||| | ||||||||| ||||||| |  || ||  ||||| | ||    |  ||||| ||||||||||||||||||||    
T  25485885 aacaaacctgactcattaacattcttatacttgaggaattcaatgaataacactcgtttgcaaaaagcctttcaagatttggtggaatccctctaatttc 25485786  T
Q  457 ctcaagaaaaatgcagt-catccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatt 529  Q
    |||||||    |||| | | || |||| ||| | | ||||| |||||||||||| |||||||||||||||||||    
T  25485785 ctcaagagccttgcacttcttcaaata-aagatgcttaagacggtgacattcaccaaggcactcgggaagaatt 25485713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 25513770 - 25513725
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatga 402  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  25513770 aacaaacctgactcattaacattcttatacttgaggaactcaatga 25513725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 25582602 - 25582557
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatga 402  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  25582602 aacaaacctgactcattaacattcttatacttgaggaactcaatga 25582557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 26058814 - 26058769
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatga 402  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  26058814 aacaaacctgactcattaacattcttatacttgaggaactcaatga 26058769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 26078784 - 26078739
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatga 402  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  26078784 aacaaacctgactcattaacattcttatacttgaggaactcaatga 26078739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 26145892 - 26145847
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatga 402  Q
    ||||||||||||||| |||||||||| | |||||||||||||||||    
T  26145892 aacaaacctgactcattaacattcttatacttgaggaactcaatga 26145847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 28239303 - 28239207
Alignment:
Q  360 aaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||| |||||| |||  |||||   |||||| ||||||||||||| | | ||||||||| ||  |||| ||| ||||||||||||||||||||    
T  28239303 aaacctgattcaatagcatgtttctggccgaggaaatcaatgatttgcagtattttgcagacaagtgttttaaatttggtggaatccctctaatttc 28239207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 28246284 - 28246188
Alignment:
Q  360 aaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||| |||||| |||  || |||  |||||| |||||||||||||   ||||||||||| ||  |||| ||| ||||||||||||||||||||    
T  28246284 aaacctgattcaatagcatgtttttgcacgaggaagtcaatgatttgcagcgtattgcagacaagtgttttaaatttggtggaatccctctaatttc 28246188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 25491190 - 25491273
Alignment:
Q  114 aatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaat 197  Q
    ||||||| |||| |||||||| | ||||| ||||||||| ||||||||   | ||||  || ||||||||||||||||||||||    
T  25491190 aatacaacttattgaagggatttctttacaaaaccagaaagaaattgtccgtcccctaatttggtgctcgaaccaatctggaat 25491273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 404
Target Start/End: Original strand, 27590394 - 27590441
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatt 404  Q
    ||||||||||| ||| |||||||||||| ||||| |||||||||||||    
T  27590394 aacaaacctgattcattaacattcttctacttgatgaactcaatgatt 27590441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #102
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 493 - 548
Target Start/End: Complemental strand, 27681716 - 27681661
Alignment:
Q  493 aagatggtgacattcactaaggcactcgggaagaatttttaaactgacaaatgata 548  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||| ||  ||||||||    
T  27681716 aagatggtgacattcacgaaggcactcaggaagaattttgaaattgctaaatgata 27681661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #103
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 404
Target Start/End: Complemental strand, 31287474 - 31287427
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatt 404  Q
    ||||||||||||||  |||||||||||| |||||||||||||| ||||    
T  31287474 aacaaacctgactcgttaacattcttctacttgaggaactcaacgatt 31287427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #104
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 493 - 531
Target Start/End: Original strand, 27695995 - 27696033
Alignment:
Q  493 aagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  27695995 aagatggtgactttcactaaggcactctggaagaatttt 27696033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #105
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 428 - 462
Target Start/End: Original strand, 27715839 - 27715873
Alignment:
Q  428 tttagattcggtggaatccctctaatttcctcaag 462  Q
    |||||||| ||||||||||||||||||||||||||    
T  27715839 tttagatttggtggaatccctctaatttcctcaag 27715873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #106
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 529
Target Start/End: Complemental strand, 26145757 - 26145720
Alignment:
Q  492 taagatggtgacattcactaaggcactcgggaagaatt 529  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  26145757 taagacggtgacattcaccaaggcactcgggaagaatt 26145720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #107
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 26808520 - 26808439
Alignment:
Q  176 ggtgctcgaaccaatctggaatcccttctgttccgcttggcaaaataatattgctacatccagcatcatgtagttgctgtta 257  Q
    ||||||||||||||||||||||||| |||||||   ||||||||  ||||||| |  || |||| |||||||| | ||||||    
T  26808520 ggtgctcgaaccaatctggaatcccctctgttctttttggcaaacaaatattggtggatacagcctcatgtaggttctgtta 26808439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #108
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 765 - 878
Target Start/End: Original strand, 27704049 - 27704162
Alignment:
Q  765 tttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagagacatc 864  Q
    ||||||||||| | ||||  ||||| ||||||||||| ||||||||| ||| ||||   | ||| || | |||||||||||||| ||| || ||||||||    
T  27704049 tttcaagtttatttaggtggccaatcgaattgtgaatcgtaattaaattatcacaatattcaaacgataacttttctaaatttgaaaggcctgagacatc 27704148  T
Q  865 agatatatgggtta 878  Q
     | |||||| ||||    
T  27704149 gggtatatgtgtta 27704162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 1e-83; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 561 - 878
Target Start/End: Original strand, 265959 - 266276
Alignment:
Q  561 aaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgg 660  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||||   ||  |||  ||| | ||||||||||||||||||||||||||||| |||    
T  265959 aaagtccactgagattttgaaatgaagatggcaattctcttatggaagtttcatacaacaaaatattttctatatttgtcatcttgcataataattttgg 266058  T
Q  661 aaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatct 760  Q
    |||  | ||||||||| ||||| |||| | || || ||||||||||||||||| ||||||||||||||||||||  |||||  ||||||||  |||||||    
T  266059 aaagctattgagactccaacacccagagagttccatttccttaagagagggcagttgtaagggtggaaaactctttagctttctgcaacccattgcatct 266158  T
Q  761 aagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagaga 860  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||| | | |||| | | |||||||||||||| |||||| |||||||| ||||    
T  266159 aagatttcaagtttaattaggtacccaactgaattgtgaattgtaattaaattcttacaatctttaaatgagagcttttttaaattaggaagtcctgaga 266258  T
Q  861 catcagatatatgggtta 878  Q
    ||||||||||||||||||    
T  266259 catcagatatatgggtta 266276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 553 - 878
Target Start/End: Original strand, 28125313 - 28125638
Alignment:
Q  553 taagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataat 652  Q
    ||||| || ||||||||||||||||| ||||||| |||| ||||||| ||||||||| | | | |||  |||||||||||||||||||||||||| ||||    
T  28125313 taagtcacgaagttcactgagattttgaaatgaaaatggtaattctcttatggaagttccacgcaaccaaatctcttctatatttgtcatcttgcctaat 28125412  T
Q  653 aattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaacccc 752  Q
    |||||||||||| |||||||||||  |||  ||   | |||||||||||||||| ||| ||| |||||||| ||||||||||| |||||| |||||||      
T  28125413 aattctggaaaactcttgagactctcacattcactgagtttcaattccttaagacaggtcaactgtaaggggggaaaactctcgagcttgctgcaacctt 28125512  T
Q  753 atgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatg-aaatgagagcttttctaaatttggaa 851  Q
     ||||||||||| |||||||||| | ||||||||||| ||||||||||||||||||||| ||| ||||  ||| |||||||| |||||||||||||||||    
T  28125513 ctgcatctaagacttcaagtttatttaggtacccaatcgaattgtgaattgtaattaaattatcacaa-tatgcaaatgagaacttttctaaatttggaa 28125611  T
Q  852 gtccagagacatcagatatatgggtta 878  Q
    |    |||||||| | |||||||||||    
T  28125612 gatgtgagacatcgggtatatgggtta 28125638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 553 - 864
Target Start/End: Complemental strand, 26138474 - 26138163
Alignment:
Q  553 taagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataat 652  Q
    |||||||  ||||||||||| ||||| ||||||| ||||||||||||||||||| || | ||  |||  ||| |||| ||||||||||| | | |  | |    
T  26138474 taagtgagcaagttcactgaaattttgaaatgaaaatggcaattctcctatggaggttccatacaaccaaatgtcttttatatttgtcaacctaccaact 26138375  T
Q  653 aattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaacccc 752  Q
    |||||||||||| |||||||||||  ||| | ||| | || ||||| ||||||||||| ||| |||||||||||||||||||| |||||| ||||||||     
T  26138374 aattctggaaaactcttgagactcttacaaatagagagttccaatttcttaagagaggtcaactgtaagggtggaaaactctcgagcttgatgcaaccct 26138275  T
Q  753 atgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaag 852  Q
     ||||| |||| ||||||||||| | ||| ||||||||||||||||||||||||||||| | | ||||   | |||||||| ||||||||||||| ||||    
T  26138274 ttgcatttaaggtttcaagtttatttaggaacccaattgaattgtgaattgtaattaaattgttacaattttcaaatgagaacttttctaaattttgaag 26138175  T
Q  853 tccagagacatc 864  Q
     || ||||||||    
T  26138174 acctgagacatc 26138163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 552 - 852
Target Start/End: Original strand, 28130343 - 28130650
Alignment:
Q  552 ttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataa 651  Q
    |||||| || ||||||||| ||||||| ||||||| |||| ||||||| |||||||||   |   |||  |||||||| ||||||||||| ||||| |||    
T  28130343 ttaagttacgaagttcacttagattttgaaatgaaaatggtaattctcttatggaagtttcactcaacctaatctcttgtatatttgtcaacttgcctaa 28130442  T
Q  652 taattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccc 751  Q
    |||||||||||| || |||||||||  |||  |    | || ||||||||||||||| | |||  ||||||| |||||| |||  |||||  ||||||||    
T  28130443 taattctggaaattttttgagactctcacattccctgagttccaattccttaagagaagtcaaccgtaaggggggaaaattcttgagcttcctgcaaccc 28130542  T
Q  752 catgcatctaagatttcaagtttaatcaggtacccaat-------tgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaa 844  Q
      ||||| ||||| |||||||||| | |||||||||||       |||||||||||||||||||||| ||| ||||   | |||||||| ||||||||||    
T  28130543 tttgcatttaagacttcaagtttatttaggtacccaatagaattgtgaattgtgaattgtaattaaattatcacaattttcaaatgagaacttttctaaa 28130642  T
Q  845 tttggaag 852  Q
    ||||||||    
T  28130643 tttggaag 28130650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 265354 - 265467
Alignment:
Q  102 cggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatccct 201  Q
    ||||| |||||||||| |||| | ||||||||||||||||||||||||||| |||||||||||| || ||||| ||||||| ||||||||||| |||||     
T  265354 cggaagaataataataaaagtaacagaagggatctttttacgaaaccagaaagaaattgtgtttcccttgctttggtgctcaaaccaatctggtatcccc 265453  T
Q  202 tctgttccgcttgg 215  Q
    ||||||||| ||||    
T  265454 tctgttccgtttgg 265467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 531
Target Start/End: Complemental strand, 26138897 - 26138721
Alignment:
Q  355 ataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatt 454  Q
    |||||||||||||||||||||||| ||| | | ||||||| ||||||| ||||| | ||||||||| |  |  |||||||| |||||||||||| |||||    
T  26138897 ataacaaacctgactcaataacatccttatacatgaggaagtcaatgacttgcattgtattgcagaaaacttttttagatttggtggaatccctttaatt 26138798  T
Q  455 tcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||||||     ||||| |||||||| ||||    |||| | ||||||||||| |||||||||| |||||||||||    
T  26138797 tcctcaaggtttttgcagccatccaattcaaggattctaataaggtgacattcattaaggcactcaggaagaatttt 26138721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 324 - 531
Target Start/End: Original strand, 28124865 - 28125066
Alignment:
Q  324 atatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacag 423  Q
    ||||||||||||| ||||||| |||||||      |||||||| ||||||| ||||||||| | ||||||| | |||||||  ||    |||||||| |     
T  28124865 atatcaaatactagtgcaagaaaaaacaa------caaacctggctcaatagcattcttctacatgaggaagttaatgattcacatcgcattgcagaaaa 28124958  T
Q  424 gtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcggga 523  Q
      | ||||| || ||||||||||||||||||||||||||| |  ||||||||||||||  |||  || | ||| |||||||||||||||| |||||||||    
T  28124959 ccattttaggtttggtggaatccctctaatttcctcaagagacttgcagtcatccaatctaaggacctttagaaggtgacattcactaagacactcggga 28125058  T
Q  524 agaatttt 531  Q
    ||||||||    
T  28125059 agaatttt 28125066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 357 - 463
Target Start/End: Original strand, 265599 - 265705
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||    ||| | || |  || ||||| ||||||||||||||||||||    
T  265599 aacaaacctgactcaataacattcttttacttgaggaactcaatgagttgcattcatacgcaaaaagctctttaagatttggtggaatccctctaatttc 265698  T
Q  457 ctcaaga 463  Q
    |||||||    
T  265699 ctcaaga 265705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 219
Target Start/End: Original strand, 28124680 - 28124777
Alignment:
Q  122 ttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcccttctgttccgcttggcaaa 219  Q
    ||||||||||||| | ||||||||||||||| ||||  || | ||||| | || |||| | ||||||||| |||||||| || |||||| ||||||||    
T  28124680 ttatagaagggatttctttacgaaaccagaaagaaacagtatgttcccagttttggtgttggaaccaatcaggaatcccctcagttccggttggcaaa 28124777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 219
Target Start/End: Original strand, 28129711 - 28129808
Alignment:
Q  122 ttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcccttctgttccgcttggcaaa 219  Q
    ||||||||||||| | ||||||||||||||| ||||  || | | ||| |||| |||| ||||| ||||| |||||||| || |||||| ||||||||    
T  28129711 ttatagaagggatttctttacgaaaccagaaagaaacagtatgtccccagctttggtgttcgaaacaatcaggaatcccctcagttccggttggcaaa 28129808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 493 - 531
Target Start/End: Original strand, 265735 - 265773
Alignment:
Q  493 aagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  265735 aagatggtgacattcactaaggcactcaggaagagtttt 265773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 8e-48; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 100 - 531
Target Start/End: Original strand, 18696477 - 18696890
Alignment:
Q  100 tccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcc 199  Q
    ||||||| |||||||||| || |||||||||||||||||||||| |||||||| |||||||  |   |||||||| | ||||||||||||||||||||||    
T  18696477 tccggaagaataataataaaatttatagaagggatctttttacggaaccagaaagaaattgattgacccctgctttgatgctcgaaccaatctggaatcc 18696576  T
Q  200 cttctgttccgcttggcaaaataatattgctacatccagcatcatgtagttgctgttacattagcaataaaatatagtattacacaataacattcttcta 299  Q
    | ||||||||| |||| |||  ||  ||| | || ||||| ||||||| |||||||||  |||||| ||| ||||| ||||||||| |                
T  18696577 cctctgttccgtttgggaaagaaaatttggtgcacccagcctcatgtaattgctgttagtttagca-taagatata-tattacacattg----------- 18696663  T
Q  300 cttgaataataaatgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaa 399  Q
     |||| || ||  |||||||||||||||||||||||| ||||||| |||||||    |||||||||||||||||||||||||||| ||||||||||||||    
T  18696664 -ttgatta-tatgtgaaatactacatatcaaatactattgcaagaaaaaacaac---aacaaacctgactcaataacattcttctacttgaggaactcaa 18696758  T
Q  400 tgatttgcaatctat-tgcagacaggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatg 498  Q
    |||||| | ||| || ||||   || || || ||||||||||||| |||||||||||||||||||    ||  |  ||||||||  ||   ||| ||| |    
T  18696759 tgatttac-atcgatatgcatcaagatatttgagattcggtggaagccctctaatttcctcaagatgcctgttgaaatccaataggagggtcctcagaag 18696857  T
Q  499 gtgacattcactaaggcactcgggaagaatttt 531  Q
    |||||||||||||||||||||||||||||||||    
T  18696858 gtgacattcactaaggcactcgggaagaatttt 18696890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 313 - 548
Target Start/End: Original strand, 18686881 - 18687113
Alignment:
Q  313 tgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct 412  Q
    |||||||||||||||||||||||| ||||||| |||||||    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||     
T  18686881 tgaaatactacatatcaaatactattgcaagaaaaaacaac---aacaaacctgactcaataacattcttctacttgaggaactcaatgatttacaatca 18686977  T
Q  413 attgcagacaggtaatttagattcggtggaatccctctaatttcctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaa 512  Q
      ||||   || || || |||||||||||||||||||||||||||||||||    ||  |  ||||||||  ||   ||| ||| |||||||||||||||    
T  18686978 tatgcatcaagatatttgagattcggtggaatccctctaatttcctcaagatgcgtgttgaaatccaataggagggtcctcagaaggtgacattcactaa 18687077  T
Q  513 ggcactcgggaagaatttttaaactgacaaatgata 548  Q
    ||||||||||||||||||| ||| || |||| ||||    
T  18687078 ggcactcgggaagaattttgaaattgccaaaggata 18687113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 621 - 878
Target Start/End: Original strand, 18677284 - 18677541
Alignment:
Q  621 caatctcttctatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaa 720  Q
    ||||||||| | ||||||||||||| |||||||||||||||||| ||||||| |||  ||| | ||| |  | ||||||||| ||||||||||    |||    
T  18677284 caatctcttttgtatttgtcatcttacataataattctggaaaactcttgagtctcttacaaaaagagaggtccaattccttcagagagggcagccataa 18677383  T
Q  721 gggtggaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaa 820  Q
    |||||||||| ||||||||||| ||||  ||||||||| |||||||||||||||| | |||| |||||| |||| |||||||| ||||||| ||| ||||    
T  18677384 gggtggaaaattctcaagcttggtgcatgcccatgcatttaagatttcaagtttatttaggttcccaatcgaatcgtgaattgcaattaaattatcacaa 18677483  T
Q  821 ccatgaaatgagagcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
        |||| ||||  ||||||||||||||||| || |||||||  | |||||||||||    
T  18677484 aatcgaaacgagaatttttctaaatttggaagacctgagacattgggtatatgggtta 18677541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 621 - 878
Target Start/End: Original strand, 18729220 - 18729477
Alignment:
Q  621 caatctcttctatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaa 720  Q
    ||||||||| | ||||||||||||| |||||||||||||||||| ||||||| |||  |||   ||  |  | ||||||||||||||||||||   | ||    
T  18729220 caatctcttttgtatttgtcatcttacataataattctggaaaactcttgagtctcttacaataagtgaggtccaattccttaagagagggcagccgcaa 18729319  T
Q  721 gggtggaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaa 820  Q
    |||||||||| ||||||||||| |||| |||||||||| |||||||||||||||| | || | |||||| |||| |||||||| ||||||| | | ||||    
T  18729320 gggtggaaaattctcaagcttgatgcatccccatgcatttaagatttcaagtttatttagcttcccaatcgaatcgtgaattgcaattaaattgtcacaa 18729419  T
Q  821 ccatgaaatgagagcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
       ||||| ||||  ||||||||||||||||| || |||||||  | |||||||||||    
T  18729420 tattgaaacgagaatttttctaaatttggaagacctgagacattgggtatatgggtta 18729477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 100 - 463
Target Start/End: Original strand, 18676628 - 18676979
Alignment:
Q  100 tccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcc 199  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| |||||||| |||||||  |   |||||||| | ||||||||||||||||||||||    
T  18676628 tccggaagaataataatagaagttatagaagggatctttttacggaaccagaaagaaattgattgacccctgctttgatgctcgaaccaatctggaatcc 18676727  T
Q  200 ------cttctgttccgcttggcaaaataatattgctacatccagcatcatgtagttgctgttacattagcaataaaatatagtattacacaataacatt 293  Q
          | ||||||||| |||| |||  ||||||| | || ||||| ||||||| |||||||||  |||||| ||| ||||| ||||||||| |          
T  18676728 taatctcctctgttccgtttgggaaacaaatattggtgcacccagcctcatgtaattgctgttagtttagca-taagatata-tattacacattg----- 18676820  T
Q  294 cttctacttgaataataaatgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgagga 393  Q
           |||| || ||  |||||||||||||||||||||||| ||||||| |||||||    |||||||||||||||||||||||||||| ||||||||    
T  18676821 -------ttgatta-tatgtgaaatactacatatcaaatactattgcaagaaaaaacaac---aacaaacctgactcaataacattcttctacttgagga 18676909  T
Q  394 actcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctcaaga 463  Q
    |||||||||||| ||   || |||    |  || || ||||||||||||| |||||||||||||||||||    
T  18676910 actcaatgatttacatcttaatgcttcaaaatatttgagattcggtggaaaccctctaatttcctcaaga 18676979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 100 - 405
Target Start/End: Original strand, 18652546 - 18652839
Alignment:
Q  100 tccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcc 199  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| |||||||| |||||||  |   |||||||| | ||||||||||||||||||||||    
T  18652546 tccggaagaataataatagaagttatagaagggatctttttacggaaccagaaagaaattgattgacccctgctttgatgctcgaaccaatctggaatcc 18652645  T
Q  200 ------cttctgttccgcttggcaaaataatattgctacatccagcatcatgtagttgctgttacattagcaataaaatatagtattacacaataacatt 293  Q
          | ||||||||| |||| |||  ||||||| | || ||||| ||||||| |||||||||  |||||| ||| ||||| ||||||||| |          
T  18652646 taatcccctctgttccgtttgggaaacaaatattggtgcacccagcctcatgtaattgctgttagtttagca-taagatata-tattacacattg----- 18652738  T
Q  294 cttctacttgaataataaatgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgagga 393  Q
           |||| || ||  |||||||||||||||||||||||| ||||||| |||||||    |||||||||||||||||||||||||||| ||||||||    
T  18652739 -------ttgatta-tatgtgaaatactacatatcaaatactattgcaagaaaaaacaac---aacaaacctgactcaataacattcttctacttgagga 18652827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 313 - 463
Target Start/End: Original strand, 18721346 - 18721493
Alignment:
Q  313 tgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct 412  Q
    |||||||||||||||||||||||| ||||||| |||||||    |||||||||||||||||||||||||||| |||||||||||||||||||| || |||    
T  18721346 tgaaatactacatatcaaatactattgcaagaaaaaacaac---aacaaacctgactcaataacattcttctacttgaggaactcaatgatttacattct 18721442  T
Q  413 attgcagacaggtaatttagattcggtggaatccctctaatttcctcaaga 463  Q
    | |||    || || || ||||||||||||| |||||||||||||||||||    
T  18721443 aatgcttcaagatatttgagattcggtggaaaccctctaatttcctcaaga 18721493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 526 - 852
Target Start/End: Complemental strand, 18076366 - 18076040
Alignment:
Q  526 aatttttaaactgacaaatgatatgcttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatc 625  Q
    |||||||||| || ||  ||||||  ||||||||| ||||||||| ||||||| ||| ||| |||| |||||||||||||||||    |  |||   ||     
T  18076366 aatttttaaattgtcacctgatattgttaagtgacgaagttcactaagattttgaaaggaaaatggaaattctcctatggaagtttccttcaacaagata 18076267  T
Q  626 tcttctatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtg 725  Q
      || |||||||||||||||||||||||||||||||||| |||||||||||  |||   ||| | || ||| | || |||||||||  | ||||||||||    
T  18076266 gattttatatttgtcatcttgcataataattctggaaaactcttgagactcttacaattagagagttccaaattctgaagagagggagactgtaagggtg 18076167  T
Q  726 gaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatg 825  Q
    |||||||||| ||||| | |||||||  ||||| ||||||||| | | || | ||||| | || ||||||||||||||||| |||| ||||||| |        
T  18076166 gaaaactctcgagcttctcgcaaccctctgcatttaagatttctaatctatttaggtatctaagtgaattgtgaattgtaactaaattatgacatcttgc 18076067  T
Q  826 aaatgagagcttttctaaatttggaag 852  Q
    ||| |||| ||||||||||||||||||    
T  18076066 aaacgagaacttttctaaatttggaag 18076040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 633 - 878
Target Start/End: Original strand, 18721810 - 18722055
Alignment:
Q  633 tatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaact 732  Q
    ||||||||||||| ||||||| |||||||||| ||||||| |||  ||| | ||| |  | |||||||| |||||||||||    |||||||||||||||    
T  18721810 tatttgtcatcttacataatagttctggaaaactcttgagtctctcacaaaaagagaggtccaattcctcaagagagggcagccataagggtggaaaact 18721909  T
Q  733 ctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgag 832  Q
    |||||||||| |||| ||  |||||| |||||||||||||||| | |||| |||||| |||| ||||| || ||||||| ||| ||||    |||| |||    
T  18721910 ctcaagcttgatgcatccagatgcatttaagatttcaagtttatttaggttcccaatcgaatcgtgaactgcaattaaattatcacaaaatcgaaacgag 18722009  T
Q  833 agcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
    |  ||||||||||||||||| || |||||||  | |||||||||||    
T  18722010 aatttttctaaatttggaagacctgagacattgggtatatgggtta 18722055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 621 - 811
Target Start/End: Original strand, 18653202 - 18653392
Alignment:
Q  621 caatctcttctatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaa 720  Q
    ||||||||| | ||||||||||||| ||||||| ||||||||||  |||||| |||  |||   ||| |  | ||||||||||||||||||||    |||    
T  18653202 caatctcttttgtatttgtcatcttacataatagttctggaaaacacttgagtctcttacaataagagacgtccaattccttaagagagggcagccataa 18653301  T
Q  721 gggtggaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaa 811  Q
    |||||||||||||||||||||  |||| |||||||||| || ||||||||||||| | |||| |||||| |||| |||||||| |||||||    
T  18653302 gggtggaaaactctcaagcttcctgcatccccatgcatttatgatttcaagtttatttaggttcccaatcgaatcgtgaattgcaattaaa 18653392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 621 - 811
Target Start/End: Original strand, 18697127 - 18697317
Alignment:
Q  621 caatctcttctatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaa 720  Q
    ||||||||| | ||||||||||||| |||||||||||||||||| ||||||| |||  |||   ||| |  | ||||||||| ||||||||||    |||    
T  18697127 caatctcttttgtatttgtcatcttacataataattctggaaaactcttgagtctcctacaataagagatgtccaattccttcagagagggcagccataa 18697226  T
Q  721 gggtggaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaa 811  Q
    |||||||||||||||||||||| |||| || ||||||| || ||||||||||||| | |||| || ||| |||| |||||||| |||||||    
T  18697227 gggtggaaaactctcaagcttgctgcatccacatgcatttatgatttcaagtttatttaggttcctaatcgaatcgtgaattgcaattaaa 18697317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 621 - 878
Target Start/End: Original strand, 18687339 - 18687596
Alignment:
Q  621 caatctcttctatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaa 720  Q
    ||||||||| | ||||||||||||| |||||||||||||||||| ||||||| |||  |||   ||| |  | ||||||||| ||||||||||    |||    
T  18687339 caatctcttttgtatttgtcatcttacataataattctggaaaactcttgagtctcctacaataagagatgtccaattccttcagagagggcagccataa 18687438  T
Q  721 gggtggaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaa 820  Q
    |||||||||||||||||||||  |||| || ||||||| || ||||||||||||| | |||| || ||| |||| |||||||| ||||||| ||| ||||    
T  18687439 gggtggaaaactctcaagcttactgcatccacatgcatttatgatttcaagtttatttaggttccaaatcgaatcgtgaattgcaattaaattattacaa 18687538  T
Q  821 ccatgaaatgagagcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
       | ||| ||||  | ||||||||||||||| ||  ||||||  | |||||||||||    
T  18687539 tattaaaacgagaattattctaaatttggaagacctaagacattgggtatatgggtta 18687596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 102 - 463
Target Start/End: Original strand, 18728569 - 18728915
Alignment:
Q  102 cggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcc-- 199  Q
    ||||| |||||||||| ||||||||||||||||||||||||  |||||||| |||||||  |   |||||||| | ||||||||||||||||||||||      
T  18728569 cggaagaataataataaaagttatagaagggatctttttacagaaccagaaagaaattgaatgacccctgctttgatgctcgaaccaatctggaatccta 18728668  T
Q  200 ----cttctgttccgcttggcaaaataatattgctacatccagcatcatgtagttgctgttacattagcaataaaatatagtattacacaataacattct 295  Q
        | ||||||||| |||| |||| ||   || | || ||||| ||||||| |||||||||  ||||| |||| ||||| ||||||      ||||| |    
T  18728669 atcacctctgttccgtttgggaaaacaaatgtggtgcacccagcctcatgtaattgctgttagtttagc-ataagatata-tattac------acattgt 18728760  T
Q  296 tctacttgaataataaatgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaac 395  Q
    |        || |||  ||||||||||| |||||||||||| ||||||| |||||      ||||||||||||||||||||||||||||  |||||||||    
T  18728761 t-------gattatatgtgaaatactacttatcaaatactattgcaagaaaaaac------aacaaacctgactcaataacattcttctagttgaggaac 18728847  T
Q  396 tcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctcaaga 463  Q
    |||||||||| || || | ||||   ||  | || ||||||||||||| |||||||||||||||||||    
T  18728848 tcaatgatttacattcaaatgcatcaagacatttgagattcggtggaaaccctctaatttcctcaaga 18728915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 18721142 - 18721241
Alignment:
Q  100 tccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcc 199  Q
    ||||||| |||||||||| ||||||||||||||||||||||||  |||||||| |||||||  |   |||||||| ||||||||||||||||||||||||    
T  18721142 tccggaagaataataataaaagttatagaagggatctttttacagaaccagaaagaaattgaatgacccctgctttggtgctcgaaccaatctggaatcc 18721241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 313 - 463
Target Start/End: Original strand, 18726266 - 18726412
Alignment:
Q  313 tgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatct 412  Q
    |||||||||||| ||||||||||| ||||||| ||||||   | |||||||||||||||| || | ||||||  ||||||||||||||||||| ||  ||    
T  18726266 tgaaatactacacatcaaatactattgcaagaaaaaaca---acaacaaacctgactcaacaa-aatcttctatttgaggaactcaatgatttacatcct 18726361  T
Q  413 attgcagacaggtaatttagattcggtggaatccctctaatttcctcaaga 463  Q
    | ||||   ||  | || ||||||||||||| |||||||||||||||||||    
T  18726362 aatgcacgaagacatttgagattcggtggaaaccctctaatttcctcaaga 18726412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 18686671 - 18686770
Alignment:
Q  100 tccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcc 199  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||  |||||||| |||||||  |   |||||||| | ||||||||||||||||||||||    
T  18686671 tccggaagaataattatagaagttatagaagggatctttttacagaaccagaaagaaattgattgacccctgctttgatgctcgaaccaatctggaatcc 18686770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 405
Target Start/End: Original strand, 18682034 - 18682123
Alignment:
Q  313 tgaaatactacatatcaaatactactgcaagataaaacaattataacaaacctgactcaataacattcttctgcttgaggaactcaatgattt 405  Q
    |||||||||||| ||||||||||| ||||||| |||||||    |||||||||||||||| |||||||||||  ||||| |||||||||||||    
T  18682034 tgaaatactacacatcaaatactattgcaagaaaaaacaac---aacaaacctgactcaacaacattcttctatttgagcaactcaatgattt 18682123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 18700970 - 18701029
Alignment:
Q  100 tccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaatt 159  Q
    ||||||| |||||||||| |||||||||| |||||||||||||  |||||||| ||||||    
T  18700970 tccggaagaataataatagaagttatagatgggatctttttacagaaccagaaagaaatt 18701029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 498 - 548
Target Start/End: Original strand, 18682171 - 18682221
Alignment:
Q  498 ggtgacattcactaaggcactcgggaagaatttttaaactgacaaatgata 548  Q
    |||||||||||||||||||||||||||||||||| ||| || |||| ||||    
T  18682171 ggtgacattcactaaggcactcgggaagaattttgaaattgccaaaggata 18682221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 498 - 548
Target Start/End: Original strand, 18726447 - 18726497
Alignment:
Q  498 ggtgacattcactaaggcactcgggaagaatttttaaactgacaaatgata 548  Q
    |||||||||||||||||||||||||||||||||| ||| || |||| ||||    
T  18726447 ggtgacattcactaaggcactcgggaagaattttgaaattgccaaaggata 18726497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 498 - 548
Target Start/End: Original strand, 18677014 - 18677064
Alignment:
Q  498 ggtgacattcactaaggcactcgggaagaatttttaaactgacaaatgata 548  Q
    ||||||||||| |||||||||||||||||||||| ||| || |||| ||||    
T  18677014 ggtgacattcattaaggcactcgggaagaattttgaaattgccaaaggata 18677064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 498 - 531
Target Start/End: Original strand, 18728950 - 18728983
Alignment:
Q  498 ggtgacattcactaaggcactcgggaagaatttt 531  Q
    |||||||||||||||||||||| |||||||||||    
T  18728950 ggtgacattcactaaggcactcaggaagaatttt 18728983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 86; Significance: 1e-40; HSPs: 6)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 562 - 878
Target Start/End: Original strand, 11283 - 11599
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||   || |||  ||||| ||  ||||||||||||||||||||||||| ||||    
T  11283 aagttcactgagattttgaaatgaagatggcaattctcttatggaagtattctgcaaccaaatctttttaatatttgtcatcttgcataataattttgga 11382  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    ||| |||||||||||  |||   ||| |  |||||||| ||||| || | |||   ||| ||||||||||| || || ||| ||||| |  |||||| ||    
T  11383 aaactcttgagactcccacaatgagagagattcaattcattaagggatgccaaccctaaaggtggaaaactttcgagtttgctgcaatcaaatgcattta 11482  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatg-aaatgagagcttttctaaatttggaagtccagaga 860  Q
    |  ||||||||||| | ||||  ||||||||||||||||||||||||||  || |||||  ||| ||| |||| |||||| |||||| |||| || ||||    
T  11483 acctttcaagtttatttaggtgtccaattgaattgtgaattgtaattaatttacgacaa-tatgcaaacgagaacttttccaaattttgaagacctgaga 11581  T
Q  861 catcagatatatgggtta 878  Q
    |||||| |||||||||||    
T  11582 catcaggtatatgggtta 11599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 561 - 878
Target Start/End: Original strand, 2319 - 2636
Alignment:
Q  561 aaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgg 660  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||||||    || |||  ||||  ||  ||||||||||||||||||||||||| |||    
T  2319 aaagttcattgagattttgaaatgaagatggcaattctcttatggaagttttctgcaaccaaatcattttcatatttgtcatcttgcataataattttgg 2418  T
Q  661 aaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatct 760  Q
    |||| |||||||||||  |||   ||| |  |||||||| ||||| || |  |    ||| ||||||||||  || || ||| |||||||   ||||  |    
T  2419 aaaactcttgagactctcacaataagagatattcaattcattaagggatgcaagccctaaaggtggaaaacgttcgagtttgctgcaaccatttgcactt 2518  T
Q  761 aagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagaga 860  Q
    ||  ||||||||||| | ||||  ||||||||||||||||||||||||||| | | ||||   | ||| |||| ||||||||||||| |||| || ||||    
T  2519 aacctttcaagtttattgaggtgtccaattgaattgtgaattgtaattaaattctcacaatattcaaaggagaacttttctaaattttgaagacctgaga 2618  T
Q  861 catcagatatatgggtta 878  Q
    |||||| |||||||||||    
T  2619 catcaggtatatgggtta 2636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 1759 - 1834
Alignment:
Q  125 tagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||||||||||||||||||    
T  1759 tagaagggatctttttacgaaaccagaaagaaattgtgtctcccctgctttggtgctcgaaccaatctggaatccc 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 357 - 524
Target Start/End: Original strand, 1956 - 2123
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||  | |||||||| ||    |  ||||| ||||||||||||||||||||    
T  1956 aacaaacctgactcaatagcattcttctacttgaagaactcaatgatttgcatcccattgcagaaagcatttcaagatttggtggaatccctctaatttc 2055  T
Q  457 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaa 524  Q
    ||| ||| |  |||||| |||||||| |||     ||||| |||||||||||||||||||||| ||||    
T  2056 ctccagagacttgcagttatccaatataaggatattaagaaggtgacattcactaaggcactcaggaa 2123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 10725 - 10800
Alignment:
Q  125 tagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||||||||||||||||||    
T  10725 tagaagggatctttttacgaaaccagaaagaaattgtgtctcccctgctttggtgctcgaaccaatctggaatccc 10800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 357 - 481
Target Start/End: Original strand, 10919 - 11043
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||||||  | |||||||| ||       ||||| ||||||||||||||||||||    
T  10919 aacaaacctgactcaatagcatttttctacttgaggaactcaatgatttgcatccgattgcagaaagccttgcaagatttggtggaatccctctaatttc 11018  T
Q  457 ctcaagaaaaatgcagtcatccaat 481  Q
    ||| ||| |  |||||| |||||||    
T  11019 ctccagagacttgcagttatccaat 11043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 5e-40; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 567 - 811
Target Start/End: Original strand, 17990853 - 17991097
Alignment:
Q  567 cactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctggaaaatt 666  Q
    |||||||||||| ||||||| |||||||||||||||||||| ||      |||  ||| | |||||| |||||||||||||||||||||||||||||| |    
T  17990853 cactgagattttgaaatgaaaatggcaattctcctatggaactatctgccaaccaaatatgttctatctttgtcatcttgcataataattctggaaaact 17990952  T
Q  667 cttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatctaagatt 766  Q
    ||| ||  ||  |||   ||||| || ||||| ||||||||| | ||| |||||||| ||||||||||| |||||| | ||||||  ||||| |||||||    
T  17990953 ctttaggttcctacatctagatagttccaatttcttaagagatgccaactgtaagggaggaaaactctcgagcttgctacaaccctgtgcatttaagatt 17991052  T
Q  767 tcaagtttaatcaggtacccaattgaattgtgaattgtaattaaa 811  Q
    ||||||||| | ||||||||||| |||| ||||||||||||||||    
T  17991053 tcaagtttatttaggtacccaatcgaatcgtgaattgtaattaaa 17991097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 17990171 - 17990269
Alignment:
Q  108 aataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatcccttctgt 206  Q
    |||||| ||| |||||||||||||||| | ||||||||||||||| ||||||||||   |||||||| ||||||| |||||||||||||||||||||||    
T  17990171 aataatgatagaagttatagaagggatttctttacgaaaccagaaagaaattgtgtgccccctgctttggtgctcaaaccaatctggaatcccttctgt 17990269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 357 - 463
Target Start/End: Original strand, 17990415 - 17990521
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    ||||||||||||| | ||| |||||||| ||||||||| ||||||||||||| ||||||||||| |  |  |  |||||||||||||||||| |||||||    
T  17990415 aacaaacctgactaagtaaaattcttctacttgaggaaatcaatgatttgcactctattgcagatattttttcaagattcggtggaatccctttaatttc 17990514  T
Q  457 ctcaaga 463  Q
    |||||||    
T  17990515 ctcaaga 17990521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 526 - 852
Target Start/End: Complemental strand, 62174 - 61848
Alignment:
Q  526 aatttttaaactgacaaatgatatgcttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatc 625  Q
    |||||||||| || ||  ||||||  ||||||||| ||||||||| ||||||| ||| ||| |||| |||||||||||||||||    |  |||   ||     
T  62174 aatttttaaattgtcacctgatattgttaagtgacgaagttcactaagattttgaaaggaaaatggaaattctcctatggaagtttccttcaacaagata 62075  T
Q  626 tcttctatatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtg 725  Q
      || |||||||||||||||||||||||||||||||||| |||||||||||  |||   ||| | || ||| | || |||||||||  | ||||||||||    
T  62074 gattttatatttgtcatcttgcataataattctggaaaactcttgagactcttacaattagagagttccaaattctgaagagagggagactgtaagggtg 61975  T
Q  726 gaaaactctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatg 825  Q
    |||||||||| ||||| | |||||||  ||||| ||||||||| | | || | ||||| | || ||||||||||||||||| |||| ||||||| |        
T  61974 gaaaactctcgagcttctcgcaaccctctgcatttaagatttctaatctatttaggtatctaagtgaattgtgaattgtaactaaattatgacatcttgc 61875  T
Q  826 aaatgagagcttttctaaatttggaag 852  Q
    ||| |||| ||||||||||||||||||    
T  61874 aaacgagaacttttctaaatttggaag 61848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 4e-34; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 357 - 531
Target Start/End: Complemental strand, 22024171 - 22023997
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||    |  ||||| ||||||||||||||||||||    
T  22024171 aacaaacctgactcaataacattcttctacttgaggaactcaatgatttgcattctattgcagaaagcctttcaagatttggtggaatccctctaatttc 22024072  T
Q  457 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||| | |  |||||  ||||||   |||  ||| || | ||||||||||| ||||||||||||||||||||||    
T  22024071 ctcaacagatttgcagcgatccaaattaagaacccaaacaaggtgacattcattaaggcactcgggaagaatttt 22023997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 29270862 - 29270963
Alignment:
Q  99 ttccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatc 198  Q
    ||||||||  |||| ||||||||| ||||||||||| | ||||||||||||||| |||||||||  | |||||||| |||| |||||||||||||| |||    
T  29270862 ttccggaagcataaaaatacaagtaatagaagggatttctttacgaaaccagaaagaaattgtgggtcccctgctttggtgttcgaaccaatctggtatc 29270961  T
Q  199 cc 200  Q
    ||    
T  29270962 cc 29270963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 561 - 664
Target Start/End: Complemental strand, 22023809 - 22023706
Alignment:
Q  561 aaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgg 660  Q
    |||||| ||||||||||| ||| |||||||||||||||| ||||||||||  ||  |||  ||| | |||||||||| |||||||||||||||||| |||    
T  22023809 aaagtttactgagattttgaaaagaagatggcaattctcttatggaagtattatacaacgaaatatattctatatttttcatcttgcataataattttgg 22023710  T
Q  661 aaaa 664  Q
    ||||    
T  22023709 aaaa 22023706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 562 - 864
Target Start/End: Original strand, 29271468 - 29271770
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||||||||||| ||||||| |||| | |||| | ||| |||||  ||| |||  ||| |  ||||||||| |||||||||||||||||||||||    
T  29271468 aagttcactgagattttgaaatgaaaatggaagttctgcaatgaaagtatgatgcaacaaaatattgtctatatttttcatcttgcataataattctgga 29271567  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    ||| | | |||||||  |||  ||   |  ||||||||||||||||| | |||   ||| |||||||||   |  ||||| |||||| |  |||||  ||    
T  29271568 aaactatcgagactcacacaaccactgagattcaattccttaagagatgccaaacctaaaggtggaaaatgtttgagctttttgcaagcatatgcactta 29271667  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagagac 861  Q
    |  ||||||||||| | ||||  ||||| ||||||||||||||| ||||| ||| ||||   | ||| || | |||||||||||||| ||| || |||||    
T  29271668 acctttcaagtttatttaggtgtccaatcgaattgtgaattgtagttaaattatcacaattttcaaacgataacttttctaaatttgaaaggcctgagac 29271767  T
Q  862 atc 864  Q
    |||    
T  29271768 atc 29271770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 463
Target Start/End: Original strand, 29271111 - 29271213
Alignment:
Q  361 aacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttcctca 460  Q
    ||||||||||| |||||||||| | |||||||||||||||||||  |||| |    |||| || |  |||||||| |||||||||||||||||||||| |    
T  29271111 aacctgactcattaacattcttttacttgaggaactcaatgattcacaatattcaacagaaagctcttttagatttggtggaatccctctaatttcctta 29271210  T
Q  461 aga 463  Q
    |||    
T  29271211 aga 29271213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 493 - 531
Target Start/End: Original strand, 29271243 - 29271281
Alignment:
Q  493 aagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||||| ||||||||||||||||||| |||||||||||    
T  29271243 aagatggagacattcactaaggcactcaggaagaatttt 29271281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 71; Significance: 1e-31; HSPs: 4)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 98 - 256
Target Start/End: Complemental strand, 16420 - 16262
Alignment:
Q  98 attccggaacaataataatacaagttatagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaat 197  Q
    ||||||||| |||||| |||||||||||||||||||| | ||||||||||||||| |||||||||  | |||||||| ||||||| ||||||||||| ||    
T  16420 attccggaaaaataattatacaagttatagaagggatttctttacgaaaccagaaagaaattgtgggtcccctgctttggtgctcaaaccaatctggtat 16321  T
Q  198 cccttctgttccgcttggcaaaataatattgctacatccagcatcatgtagttgctgtt 256  Q
    ||| ||||||||| |||| ||  |||||| | | |||||||| | |||||||| |||||    
T  16320 cccatctgttccgtttgggaatttaatataggtgcatccagcctgatgtagtttctgtt 16262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 562 - 878
Target Start/End: Complemental strand, 15816 - 15500
Alignment:
Q  562 aagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataataattctgga 661  Q
    ||||||||| ||||||| ||||||| |||||| ||||||||||||||||  |   |||  ||| |  |||||||||||||||||||||||||||||||||    
T  15816 aagttcactaagattttgaaatgaaaatggcagttctcctatggaagtattacacaaccaaatattgtctatatttgtcatcttgcataataattctgga 15717  T
Q  662 aaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccccatgcatcta 761  Q
    ||| |||||||||||   ||   |   |  ||||||||||||||||| | |||   ||| |||||||||   || | ||| ||||||||  |||||  ||    
T  15716 aaactcttgagactcctgcaagaactgagattcaattccttaagagatgccaaacctaaaggtggaaaatgttcgaccttattgcaaccatatgcactta 15617  T
Q  762 agatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaagtccagagac 861  Q
    |  ||||||||||| | ||||  ||||| ||||||||||||||||||||| ||| ||| |  | ||| || | |||||||||||||| ||| || |||||    
T  15616 acctttcaagtttattaaggtgtccaatcgaattgtgaattgtaattaaattataacatctttcaaacgataacttttctaaatttgaaaggcctgagac 15517  T
Q  862 atcagatatatgggtta 878  Q
    ||| | |||||| ||||    
T  15516 atcgggtatatgtgtta 15500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 493 - 531
Target Start/End: Complemental strand, 16041 - 16003
Alignment:
Q  493 aagatggtgacattcactaaggcactcgggaagaatttt 531  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  16041 aagatggtgacattcactaaggcactcaggaagaatttt 16003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #4
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 428 - 462
Target Start/End: Complemental strand, 16106 - 16072
Alignment:
Q  428 tttagattcggtggaatccctctaatttcctcaag 462  Q
    |||||||| ||||||||||||||||||||||||||    
T  16106 tttagatttggtggaatccctctaatttcctcaag 16072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 67; Significance: 3e-29; HSPs: 3)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 552 - 878
Target Start/End: Complemental strand, 10076 - 9750
Alignment:
Q  552 ttaagtgacaaagttcactgagatttttaaatgaagatggcaattctcctatggaagtacaatgtaactcaatctcttctatatttgtcatcttgcataa 651  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||||||| |||||||||    || |||  ||||  ||  ||||||||||||||||||||    
T  10076 ttaactgaaaaagttcattgagattttgaaatgaagatggcaattctcttatggaagttttctgcaaccaaatcgttttcatatttgtcatcttgcataa 9977  T
Q  652 taattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaactctcaagcttgttgcaaccc 751  Q
    ||||| ||||||| |||||||||||  |||   ||| |  |||||||| ||||| || |  |    ||| ||||||||||  || || ||| |||||||     
T  9976 taattttggaaaactcttgagactctcacaataagagatattcaattcattaagggatgcaagccctaaaggtggaaaacgttcgagtttgctgcaacca 9877  T
Q  752 catgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatgagagcttttctaaatttggaa 851  Q
      ||||  |||  ||||||||||| | ||||  ||||||||||||||||||||||||||| | | ||||   | ||| |||| ||||||||||||| |||    
T  9876 tttgcacttaacctttcaagtttattgaggtgtccaattgaattgtgaattgtaattaaattctcacaatattcaaaggagaacttttctaaattttgaa 9777  T
Q  852 gtccagagacatcagatatatgggtta 878  Q
    | || |||||||||| |||||||||||    
T  9776 gacctgagacatcaggtatatgggtta 9750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 357 - 524
Target Start/End: Complemental strand, 10430 - 10263
Alignment:
Q  357 aacaaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||  | |||||||| ||    |  ||||| |||| |||||||||||||||    
T  10430 aacaaacctgactcaatagcattcttctacttgaggaactcaatgatttgcatcccattgcagaaagcctttcaagatttggtgcaatccctctaatttc 10331  T
Q  457 ctcaagaaaaatgcagtcatccaatacaagctccctaagatggtgacattcactaaggcactcgggaa 524  Q
    ||| ||| |  |||||| |||||||| ||| |   ||||| |||||||||||||||||||||| ||||    
T  10330 ctccagagacttgcagttatccaatataaggttattaagaaggtgacattcactaaggcactcaggaa 10263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 10624 - 10549
Alignment:
Q  125 tagaagggatctttttacgaaaccagaaggaaattgtgttttccctgcttcggtgctcgaaccaatctggaatccc 200  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||| |||||||||||||||||||||||||    
T  10624 tagaagggatctttttacgaaaccagaaagaaattgtgtctcccctgctttggtgctcgaaccaatctggaatccc 10549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 632 - 878
Target Start/End: Complemental strand, 1277 - 1031
Alignment:
Q  632 atatttgtcatcttgcataataattctggaaaattcttgagactcgaacacacagataatttcaattccttaagagagggcaattgtaagggtggaaaac 731  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||  |||   ||| |  |||||||| ||||| || |  |    ||| ||||||||||    
T  1277 atatttgtcatcttgcataataattttggaaaactcttgagactctcacaataagagatattcaattcattaagggatgcaagccctaaaggtggaaaac 1178  T
Q  732 tctcaagcttgttgcaaccccatgcatctaagatttcaagtttaatcaggtacccaattgaattgtgaattgtaattaaactatgacaaccatgaaatga 831  Q
      || || ||| |||||||   ||||  |||  ||||||||||| | ||||  ||||||||||||||||||||||||||| | | ||||   | ||| ||    
T  1177 gttcgagtttgctgcaaccatttgcacttaacctttcaagtttattgaggtgtccaattgaattgtgaattgtaattaaattctcacaatattcaaagga 1078  T
Q  832 gagcttttctaaatttggaagtccagagacatcagatatatgggtta 878  Q
    || ||||||||||||| |||| || |||||||||| |||||||||||    
T  1077 gaacttttctaaattttgaagacctgagacatcaggtatatgggtta 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 39465 - 39369
Alignment:
Q  360 aaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||| |||||| |||  |||||   |||||| ||||||||||||| | | ||||||||| ||  |||| ||| ||||||||||||||||||||    
T  39465 aaacctgattcaatagcatgtttctggccgaggaaatcaatgatttgcagtattttgcagacaagtgttttaaatttggtggaatccctctaatttc 39369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 456
Target Start/End: Complemental strand, 46446 - 46350
Alignment:
Q  360 aaacctgactcaataacattcttctgcttgaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||||| |||||| |||  || |||  |||||| |||||||||||||   ||||||||||| ||  |||| ||| ||||||||||||||||||||    
T  46446 aaacctgattcaatagcatgtttttgcacgaggaagtcaatgatttgcagcgtattgcagacaagtgttttaaatttggtggaatccctctaatttc 46350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 456
Target Start/End: Original strand, 55513 - 55580
Alignment:
Q  389 gaggaactcaatgatttgcaatctattgcagacaggtaatttagattcggtggaatccctctaatttc 456  Q
    |||||| |||||||||||||   ||||||||||| ||  |||| ||| ||||||||||||||||||||    
T  55513 gaggaagtcaatgatttgcagcgtattgcagacaagtgttttacatttggtggaatccctctaatttc 55580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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