View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6596_high_11 (Length: 219)
Name: NF6596_high_11
Description: NF6596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6596_high_11 |
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Alignment Details
Target: chr4 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 45403560 - 45403750
Alignment:
| Q |
8 |
cagaaataccttgggagaagaatacatgaatcctgtaaagaatgaatgaaataaatgcagaactatttctatacagttttaaatcttcactttgaatcct |
107 |
Q |
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| T |
45403560 |
cagaaataccttgggagaagaatacatgaatcctgtaaagaatgaatgaaataaatgcagaactatttctatacagttttaaatcttcactttgaatcct |
45403659 |
T |
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| Q |
108 |
gactcgctccaacaattttttacttgattttacttacttctcggtcgaacgtcagattatgtgggccccgttccatcgaggagcatcgaagggttaagac |
207 |
Q |
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| T |
45403660 |
gactcgctcgaacaatt----------ttttacttacttctcggtcgaacgtcagattatgtgggccccgttccctcgaggagcatcgaagggttaagac |
45403749 |
T |
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