View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6597_high_21 (Length: 350)
Name: NF6597_high_21
Description: NF6597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6597_high_21 |
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Alignment Details
Target: chr5 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 35 - 331
Target Start/End: Original strand, 9149427 - 9149723
Alignment:
| Q |
35 |
aatatcttttgaatacttaatcaaagacattacaccaaaaatacctttgtgccactcaccctaaaccaacaacaaatgtgtaactgcgccattgttgttg |
134 |
Q |
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| T |
9149427 |
aatatcttttgaatacttaatcaaagacattacaccaaaaatacctttgtgccactcaccctaaaccaacaacaaatgtgtaactgcaccattgttgttg |
9149526 |
T |
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| Q |
135 |
accttcattaaagttcccatatccctttaatttctcccataatttggatgtgtcccatcagtttaaagaacatccaactttctgtagtgacaagaaggag |
234 |
Q |
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| T |
9149527 |
accttcattaaagttcccatatccctttaatttctcccataatttggatgtgtcccatcagtttaaagaacatccaactttctgtagtgacaagaaggag |
9149626 |
T |
|
| Q |
235 |
aaaagcccgtatgcaccgctgccataagaagttagagaatgactgttttaacttatatttaagttatcattcttagtcgattttgttccactgagct |
331 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9149627 |
aaaagcccgtatgcaccgctgccataagaagttggagaatgactgttttaacttatatttaagttatcattcttagtcgattttgttccactgagct |
9149723 |
T |
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