View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6597_high_25 (Length: 330)
Name: NF6597_high_25
Description: NF6597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6597_high_25 |
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Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 25995885 - 25996149
Alignment:
| Q |
8 |
agattattctaactcttaagaattcttacaggctaagtttatccacatttgacaataatcaatgcatttaagaatatagtgat-----agtaacaatata |
102 |
Q |
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| T |
25995885 |
agattcttctaactcttaagaattcttacaggctaagtttatccacatttgacaataatcaatgcatttaagaatatagtgatatgatagtaac-----a |
25995979 |
T |
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| Q |
103 |
atataattttataaatttttatgcgcctctctaaatatttataagatttacctctccttggattgaggaatttactttagaaaaatcatatgaactgtaa |
202 |
Q |
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| T |
25995980 |
atataattttataaatttttatgcgcctctctaaatatttttaagatttacctctcctt-gattgaggaatttactttagaaaaatcatatgaactgtaa |
25996078 |
T |
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| Q |
203 |
atgaaatatgaataaagtggattttattaaattcatatttatctttatgtacatataataatgccaattgt |
273 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25996079 |
ataaaatatgaataaagtggattttattaaattcatatttatctttatgtacatataataatgccaattgt |
25996149 |
T |
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