View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6600_high_17 (Length: 201)
Name: NF6600_high_17
Description: NF6600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6600_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 183; Significance: 3e-99; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 183; E-Value: 3e-99
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 38877288 - 38877102
Alignment:
| Q |
1 |
tgaagatcaatttcacttatgatctgaataattatcatctatatacatactgaaagaaactcctaagggactagtttttgccaacatcaaccacagtttt |
100 |
Q |
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| T |
38877288 |
tgaagatcaatttcacttatgatctgaataattatcatctatatacatactgaaagaaactcctaagggactagtttttgccaacatcaaccacagtttt |
38877189 |
T |
|
| Q |
101 |
tctaccagaaacggaatttcgctgccaacttaaaatcaaaattaaaaatcagatacaggtttcatctagaaagaaagatagcacagg |
187 |
Q |
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| T |
38877188 |
tctaccagaaacggaattttgctgccaacttaaaatcaaaattaaaaatcagatacaggtttcatctagaaagaaagatagcacagg |
38877102 |
T |
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