View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6600_low_16 (Length: 203)
Name: NF6600_low_16
Description: NF6600
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6600_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 36511033 - 36510860
Alignment:
| Q |
19 |
cattggtctataaatccaatgcttattttctgtgtttctc--atctctcttactactcaaaccaaggcacgttactaacaatctaaatctatggcgtttt |
116 |
Q |
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| T |
36511033 |
cattggtctataaatccaatgcttattttatgcgtttctcgtatctctcttactactcaaaccaagacacgttactaacaatctaaatctatggcttttt |
36510934 |
T |
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| Q |
117 |
ctctttctttcgctacttcaaccaaacattcaacgttttcttcaaacaaaacctcaaatattttggagtataat |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36510933 |
ctctttctttcgctacttcaaccaaacattcaacgttttcttcaaacaaaacctcaaatattttggagtataat |
36510860 |
T |
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