View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6604_high_6 (Length: 367)

Name: NF6604_high_6
Description: NF6604
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6604_high_6
NF6604_high_6
[»] chr1 (40 HSPs)
chr1 (22-367)||(12727760-12728105)
chr1 (249-367)||(16907229-16907347)
chr1 (249-367)||(50002318-50002436)
chr1 (254-367)||(2328315-2328428)
chr1 (286-367)||(20054113-20054194)
chr1 (286-367)||(20054569-20054650)
chr1 (286-367)||(20055025-20055106)
chr1 (286-367)||(20055481-20055562)
chr1 (286-367)||(20055937-20056018)
chr1 (286-367)||(20056393-20056474)
chr1 (286-367)||(20057296-20057377)
chr1 (254-367)||(35759641-35759754)
chr1 (249-364)||(10820587-10820702)
chr1 (286-365)||(38340938-38341017)
chr1 (249-367)||(43057556-43057674)
chr1 (254-367)||(2634924-2635037)
chr1 (286-367)||(20057752-20057833)
chr1 (286-367)||(20061224-20061305)
chr1 (254-367)||(35760947-35761060)
chr1 (247-367)||(31822696-31822816)
chr1 (284-367)||(12883554-12883637)
chr1 (265-367)||(30872983-30873085)
chr1 (265-367)||(52250217-52250319)
chr1 (286-367)||(20845694-20845775)
chr1 (294-367)||(50002740-50002813)
chr1 (254-367)||(7548091-7548204)
chr1 (290-367)||(16451966-16452043)
chr1 (290-367)||(16461119-16461196)
chr1 (290-367)||(20056849-20056926)
chr1 (290-367)||(43057098-43057175)
chr1 (304-367)||(46693768-46693831)
chr1 (249-367)||(50003108-50003226)
chr1 (309-367)||(20060373-20060431)
chr1 (254-366)||(23180730-23180842)
chr1 (304-364)||(51372910-51372970)
chr1 (292-367)||(16440612-16440687)
chr1 (245-338)||(42317616-42317709)
chr1 (323-367)||(31823117-31823161)
chr1 (306-361)||(46411173-46411228)
chr1 (260-340)||(842993-843073)
[»] chr4 (55 HSPs)
chr4 (265-367)||(8467827-8467929)
chr4 (249-367)||(3169201-3169319)
chr4 (249-367)||(1645776-1645894)
chr4 (249-367)||(4127464-4127582)
chr4 (289-367)||(44471352-44471430)
chr4 (253-367)||(49998635-49998749)
chr4 (286-367)||(12692026-12692107)
chr4 (249-358)||(29628703-29628812)
chr4 (254-367)||(50398565-50398678)
chr4 (290-367)||(14572177-14572254)
chr4 (254-367)||(50399020-50399133)
chr4 (254-367)||(51331308-51331421)
chr4 (265-367)||(14571748-14571850)
chr4 (289-367)||(23350310-23350388)
chr4 (249-367)||(23942816-23942934)
chr4 (290-367)||(7678649-7678726)
chr4 (304-367)||(4127916-4127979)
chr4 (286-357)||(21067766-21067837)
chr4 (265-367)||(1464158-1464260)
chr4 (286-364)||(27026535-27026613)
chr4 (286-367)||(9423885-9423966)
chr4 (290-367)||(24629460-24629537)
chr4 (254-367)||(31817879-31817992)
chr4 (304-367)||(21220358-21220421)
chr4 (254-361)||(35871628-35871735)
chr4 (286-364)||(13266118-13266196)
chr4 (253-367)||(41869917-41870031)
chr4 (304-366)||(44470902-44470964)
chr4 (293-367)||(53996142-53996216)
chr4 (302-367)||(23943269-23943334)
chr4 (303-367)||(17628560-17628624)
chr4 (287-367)||(27029310-27029390)
chr4 (249-340)||(53854861-53854952)
chr4 (290-367)||(24629004-24629084)
chr4 (286-367)||(21067314-21067395)
chr4 (290-367)||(23976246-23976323)
chr4 (279-364)||(42838648-42838733)
chr4 (265-367)||(15306118-15306226)
chr4 (254-367)||(31817425-31817538)
chr4 (302-367)||(33764908-33764973)
chr4 (303-367)||(13613924-13613988)
chr4 (303-367)||(14351844-14351908)
chr4 (249-317)||(20309595-20309663)
chr4 (304-367)||(17629018-17629081)
chr4 (320-367)||(50814852-50814899)
chr4 (314-364)||(20306191-20306241)
chr4 (305-367)||(27578936-27578998)
chr4 (285-367)||(26200312-26200396)
chr4 (286-367)||(43928990-43929071)
chr4 (287-367)||(4185748-4185828)
chr4 (264-367)||(9882619-9882720)
chr4 (285-361)||(24271583-24271659)
chr4 (265-340)||(2499648-2499723)
chr4 (320-367)||(27578484-27578531)
chr4 (287-364)||(17028907-17028984)
[»] chr7 (44 HSPs)
chr7 (249-367)||(6719107-6719225)
chr7 (279-366)||(2193281-2193368)
chr7 (254-367)||(6747631-6747744)
chr7 (279-364)||(25182386-25182471)
chr7 (254-367)||(28495854-28495967)
chr7 (290-367)||(36422288-36422365)
chr7 (254-367)||(42515092-42515205)
chr7 (287-367)||(13125169-13125249)
chr7 (289-367)||(2941790-2941868)
chr7 (265-367)||(42515555-42515657)
chr7 (294-367)||(2465773-2465846)
chr7 (290-367)||(2465960-2466037)
chr7 (290-367)||(34405624-34405701)
chr7 (254-367)||(46425741-46425854)
chr7 (279-367)||(2189169-2189257)
chr7 (249-364)||(43233408-43233523)
chr7 (286-364)||(5406624-5406702)
chr7 (249-351)||(26957606-26957708)
chr7 (254-363)||(11517426-11517534)
chr7 (290-367)||(28495641-28495718)
chr7 (286-367)||(29357489-29357570)
chr7 (290-367)||(35474154-35474231)
chr7 (286-367)||(9124991-9125072)
chr7 (292-367)||(22529268-22529343)
chr7 (290-361)||(26421344-26421415)
chr7 (254-340)||(13124761-13124847)
chr7 (290-367)||(679853-679929)
chr7 (290-367)||(2611685-2611762)
chr7 (289-367)||(18833321-18833399)
chr7 (293-367)||(29039053-29039127)
chr7 (305-367)||(35527154-35527216)
chr7 (286-367)||(36015444-36015525)
chr7 (303-367)||(9623257-9623321)
chr7 (303-367)||(31743857-31743921)
chr7 (304-367)||(31406617-31406680)
chr7 (249-338)||(3305374-3305463)
chr7 (304-361)||(11372501-11372558)
chr7 (286-367)||(26421793-26421874)
chr7 (286-335)||(33316760-33316809)
chr7 (279-355)||(2490064-2490140)
chr7 (303-351)||(6585657-6585705)
chr7 (303-365)||(16192368-16192430)
chr7 (290-340)||(16811906-16811956)
chr7 (257-367)||(1628719-1628826)
[»] chr5 (40 HSPs)
chr5 (249-367)||(17445488-17445606)
chr5 (249-367)||(10927436-10927554)
chr5 (286-367)||(34867822-34867903)
chr5 (254-367)||(39146939-39147052)
chr5 (290-365)||(10926981-10927056)
chr5 (265-367)||(2193827-2193929)
chr5 (249-367)||(20039507-20039625)
chr5 (285-367)||(21886179-21886261)
chr5 (286-367)||(1821938-1822019)
chr5 (286-367)||(8642067-8642148)
chr5 (286-367)||(22556568-22556649)
chr5 (303-367)||(2474008-2474072)
chr5 (295-367)||(42788679-42788751)
chr5 (293-367)||(2474444-2474518)
chr5 (289-367)||(3887090-3887168)
chr5 (249-367)||(8391355-8391472)
chr5 (254-367)||(189068-189181)
chr5 (286-367)||(22557001-22557082)
chr5 (290-367)||(27646868-27646945)
chr5 (292-367)||(34372106-34372181)
chr5 (245-367)||(24182278-24182400)
chr5 (249-367)||(15513045-15513164)
chr5 (285-367)||(30719838-30719920)
chr5 (289-367)||(34371647-34371725)
chr5 (279-367)||(42429170-42429258)
chr5 (292-367)||(3886634-3886709)
chr5 (286-367)||(18750229-18750310)
chr5 (308-360)||(2058696-2058748)
chr5 (303-367)||(16370741-16370805)
chr5 (249-367)||(30684589-30684707)
chr5 (254-367)||(4658026-4658138)
chr5 (302-367)||(11160714-11160779)
chr5 (290-367)||(18304467-18304544)
chr5 (311-367)||(5066924-5066980)
chr5 (308-367)||(20858574-20858633)
chr5 (290-367)||(29680140-29680210)
chr5 (302-367)||(4673504-4673569)
chr5 (254-334)||(22975076-22975156)
chr5 (285-364)||(39801498-39801578)
chr5 (287-367)||(43356653-43356732)
[»] scaffold0040 (1 HSPs)
scaffold0040 (286-367)||(2243-2324)
[»] chr8 (41 HSPs)
chr8 (286-367)||(41659138-41659219)
chr8 (279-367)||(22549028-22549116)
chr8 (254-367)||(6464943-6465056)
chr8 (289-367)||(17103116-17103194)
chr8 (254-367)||(2044058-2044171)
chr8 (286-367)||(10844915-10844996)
chr8 (286-367)||(22026411-22026492)
chr8 (286-367)||(27925931-27926012)
chr8 (279-367)||(22548582-22548670)
chr8 (281-367)||(25147563-25147649)
chr8 (290-367)||(12827287-12827364)
chr8 (287-367)||(10844648-10844728)
chr8 (290-364)||(27022374-27022448)
chr8 (265-367)||(28375087-28375189)
chr8 (290-367)||(8080375-8080452)
chr8 (290-367)||(22840562-22840639)
chr8 (254-367)||(34308512-34308625)
chr8 (303-367)||(27021912-27021976)
chr8 (265-364)||(6466722-6466820)
chr8 (280-367)||(33852291-33852378)
chr8 (289-367)||(12100726-12100804)
chr8 (286-367)||(25144804-25144885)
chr8 (286-367)||(32292429-32292510)
chr8 (303-367)||(27819279-27819343)
chr8 (279-367)||(30334941-30335029)
chr8 (287-367)||(41913003-41913083)
chr8 (247-357)||(1297000-1297110)
chr8 (290-364)||(22705208-22705282)
chr8 (290-367)||(3744674-3744751)
chr8 (286-367)||(28453370-28453451)
chr8 (305-364)||(15568041-15568100)
chr8 (297-367)||(3745144-3745214)
chr8 (298-367)||(15819048-15819117)
chr8 (290-351)||(29971450-29971511)
chr8 (307-367)||(25148020-25148080)
chr8 (307-365)||(17429553-17429611)
chr8 (304-367)||(34308968-34309035)
chr8 (304-361)||(36968434-36968491)
chr8 (319-367)||(21316142-21316190)
chr8 (316-367)||(30527515-30527566)
chr8 (298-367)||(15567589-15567658)
[»] chr2 (35 HSPs)
chr2 (254-367)||(33174958-33175071)
chr2 (279-367)||(1707066-1707154)
chr2 (249-367)||(16379388-16379506)
chr2 (265-367)||(8073903-8074005)
chr2 (289-367)||(30966269-30966347)
chr2 (290-367)||(8256562-8256639)
chr2 (286-367)||(25338030-25338111)
chr2 (286-367)||(1953187-1953268)
chr2 (290-367)||(29804718-29804795)
chr2 (286-367)||(41754321-41754402)
chr2 (249-364)||(18447954-18448069)
chr2 (292-367)||(30966728-30966803)
chr2 (249-367)||(33174500-33174616)
chr2 (249-367)||(18098911-18099029)
chr2 (254-364)||(24818326-24818436)
chr2 (290-367)||(1912561-1912638)
chr2 (254-367)||(29259653-29259766)
chr2 (290-367)||(33771037-33771114)
chr2 (245-364)||(83008-83127)
chr2 (265-367)||(16378948-16379050)
chr2 (286-364)||(20502055-20502133)
chr2 (254-367)||(27882959-27883072)
chr2 (303-367)||(13191023-13191087)
chr2 (303-367)||(30963753-30963817)
chr2 (304-367)||(5399850-5399913)
chr2 (302-364)||(16542033-16542095)
chr2 (265-363)||(25434093-25434191)
chr2 (290-367)||(11388224-11388300)
chr2 (290-367)||(11394571-11394647)
chr2 (303-364)||(30963299-30963360)
chr2 (302-367)||(38898945-38899010)
chr2 (305-357)||(8181394-8181446)
chr2 (286-367)||(15619930-15620011)
chr2 (305-367)||(36924455-36924519)
chr2 (319-367)||(15639799-15639847)
[»] chr6 (43 HSPs)
chr6 (249-367)||(3652481-3652599)
chr6 (253-367)||(13191546-13191660)
chr6 (253-367)||(17027564-17027678)
chr6 (265-367)||(20850332-20850434)
chr6 (265-367)||(21311982-21312084)
chr6 (290-367)||(6330945-6331022)
chr6 (286-367)||(7911910-7911991)
chr6 (290-367)||(20896721-20896798)
chr6 (290-367)||(23776477-23776554)
chr6 (279-367)||(13492814-13492902)
chr6 (245-367)||(20735686-20735808)
chr6 (249-367)||(23986350-23986468)
chr6 (286-367)||(7912342-7912423)
chr6 (254-367)||(9352062-9352175)
chr6 (254-367)||(16519968-16520081)
chr6 (254-367)||(20126215-20126328)
chr6 (254-357)||(17731156-17731259)
chr6 (290-367)||(2681249-2681326)
chr6 (290-367)||(14771752-14771829)
chr6 (286-367)||(27334193-27334274)
chr6 (286-367)||(27394933-27395014)
chr6 (279-367)||(11062310-11062398)
chr6 (249-364)||(31821728-31821843)
chr6 (286-348)||(2720616-2720678)
chr6 (286-367)||(2890872-2890953)
chr6 (290-367)||(15929235-15929312)
chr6 (292-367)||(15929620-15929695)
chr6 (289-367)||(20732613-20732691)
chr6 (254-367)||(21311515-21311628)
chr6 (286-340)||(9440488-9440542)
chr6 (286-364)||(32292917-32292995)
chr6 (286-367)||(9440342-9440423)
chr6 (286-367)||(9440890-9440971)
chr6 (286-367)||(17851406-17851487)
chr6 (261-354)||(10964312-10964404)
chr6 (319-367)||(13492397-13492445)
chr6 (286-367)||(33775035-33775118)
chr6 (288-367)||(1991587-1991666)
chr6 (286-340)||(30729899-30729953)
chr6 (286-339)||(9441082-9441135)
chr6 (303-364)||(17205388-17205449)
chr6 (286-367)||(17850950-17851031)
chr6 (319-364)||(28065874-28065919)
[»] scaffold0168 (1 HSPs)
scaffold0168 (254-367)||(2742-2855)
[»] scaffold0088 (1 HSPs)
scaffold0088 (249-366)||(23668-23785)
[»] chr3 (40 HSPs)
chr3 (254-367)||(27187363-27187476)
chr3 (286-367)||(28561778-28561859)
chr3 (286-367)||(31284309-31284390)
chr3 (290-367)||(39640973-39641050)
chr3 (249-367)||(25230738-25230856)
chr3 (249-367)||(25238325-25238443)
chr3 (290-367)||(11180067-11180144)
chr3 (290-367)||(20885150-20885227)
chr3 (254-367)||(30529687-30529800)
chr3 (254-367)||(32796968-32797081)
chr3 (249-367)||(25230281-25230399)
chr3 (249-367)||(25237868-25237986)
chr3 (290-367)||(13150132-13150209)
chr3 (254-367)||(25248111-25248224)
chr3 (290-367)||(32227254-32227331)
chr3 (290-367)||(32227536-32227613)
chr3 (286-367)||(32386767-32386848)
chr3 (306-367)||(4067393-4067454)
chr3 (286-367)||(7493913-7493994)
chr3 (302-367)||(13150587-13150652)
chr3 (290-367)||(14813985-14814062)
chr3 (254-367)||(16811381-16811494)
chr3 (302-367)||(25238717-25238782)
chr3 (290-367)||(25239110-25239187)
chr3 (286-367)||(39653196-39653277)
chr3 (303-367)||(29224373-29224437)
chr3 (292-367)||(50347784-50347859)
chr3 (289-367)||(41472336-41472413)
chr3 (286-367)||(7477223-7477304)
chr3 (286-364)||(8067312-8067390)
chr3 (290-367)||(25803037-25803114)
chr3 (254-357)||(41473997-41474100)
chr3 (265-367)||(37045046-37045148)
chr3 (286-367)||(2911127-2911208)
chr3 (311-364)||(14820211-14820264)
chr3 (254-367)||(16810925-16811038)
chr3 (290-367)||(25802581-25802658)
chr3 (258-367)||(31103993-31104102)
chr3 (303-367)||(26310022-26310086)
chr3 (303-335)||(47518384-47518416)
[»] scaffold0499 (1 HSPs)
scaffold0499 (265-367)||(2084-2186)
[»] scaffold0322 (1 HSPs)
scaffold0322 (253-367)||(18965-19079)
[»] scaffold0020 (1 HSPs)
scaffold0020 (254-367)||(107496-107609)
[»] scaffold0007 (1 HSPs)
scaffold0007 (254-367)||(142307-142420)
[»] scaffold0005 (2 HSPs)
scaffold0005 (290-367)||(245122-245199)
scaffold0005 (265-367)||(245526-245628)
[»] scaffold0243 (1 HSPs)
scaffold0243 (287-367)||(1253-1333)
[»] scaffold0047 (2 HSPs)
scaffold0047 (254-364)||(18170-18280)
scaffold0047 (265-367)||(17631-17733)
[»] scaffold0022 (2 HSPs)
scaffold0022 (289-367)||(162711-162789)
scaffold0022 (281-364)||(69851-69934)
[»] scaffold0002 (1 HSPs)
scaffold0002 (290-367)||(154793-154870)
[»] scaffold0333 (2 HSPs)
scaffold0333 (287-367)||(4594-4674)
scaffold0333 (287-367)||(5049-5134)
[»] scaffold0024 (1 HSPs)
scaffold0024 (253-367)||(105719-105833)
[»] scaffold0018 (1 HSPs)
scaffold0018 (254-364)||(10300-10410)
[»] scaffold0664 (1 HSPs)
scaffold0664 (286-367)||(4015-4096)
[»] scaffold0557 (1 HSPs)
scaffold0557 (302-367)||(2153-2218)
[»] scaffold0101 (1 HSPs)
scaffold0101 (279-365)||(45411-45497)
[»] scaffold0391 (1 HSPs)
scaffold0391 (307-367)||(14794-14854)


Alignment Details
Target: chr1 (Bit Score: 295; Significance: 1e-166; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 22 - 367
Target Start/End: Original strand, 12727760 - 12728105
Alignment:
Q  22 tggtggaggagattttggatctttatcttttaggtttatcagttgaaagataaaataaaatcaaaacacagaaagtaaaacagggcattaaagtgttctt 121  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12727760 tggtggaggagattttggatctttatcttttagatttatcagttgaaagataaaataaaatcaaaacacagaaagtaaaacagggcattaa-gtgttctt 12727858  T
Q  122 tttactcttaattacaatatgataagtgaactttgataactcaactcaatagactaatacttactcctctcttaacttctgcactatcacctaactcccc 221  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12727859 tttactcttaattacaatattataagtgaagtttgataactcaactcaatagactaatgcttactcctctcttaacttctgcactatcacctaactcccc 12727958  T
Q  222 tcatgtaacgtctgaggctgacgaggcaaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagactt 321  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  12727959 ttatgtaacgtctgaggctgacgaggcaaccgaatcacattgaaatgaaagggattctgagactgtgtaggtatgggacaacatggttgaaggaagactt 12728058  T
Q  322 ataagaattgtttgg-tactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  12728059 ataagaattgtttggttactgcctatatcaacaagatgcatcttctt 12728105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 249 - 367
Target Start/End: Original strand, 16907229 - 16907347
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||||||||| ||  |||||| ||||||| ||||||||||||||||||  ||  |||||||||| |||| |||||||||||||||||||||| |||||||    
T  16907229 aaccaaatcatatcaaaatgagagggattttgagactgtgcaggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatat 16907328  T
Q  349 caataagatgcatcttctt 367  Q
    ||| ||||| |||||||||    
T  16907329 caacaagatacatcttctt 16907347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 50002436 - 50002318
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| |||||| ||||| | ||| ||| ||||||| |||||||||||||||| |||||||||||||||||||||| ||| |||    
T  50002436 aaccgaatcacatcggaatgagagggatcatgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctttat 50002337  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  50002336 caacaagatgcatcttctt 50002318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 2328315 - 2328428
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||||| ||||| ||  |||||||| | || ||||||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||| || |    
T  2328315 aatcacattggaatgagagaaattatgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaaca 2328414  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  2328415 agatgcatcttctt 2328428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 20054194 - 20054113
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20054194 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 20054113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 20054650 - 20054569
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20054650 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 20054569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 20055106 - 20055025
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20055106 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 20055025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 20055562 - 20055481
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20055562 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 20055481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 20056018 - 20055937
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20056018 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 20055937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 20056474 - 20056393
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20056474 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 20056393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 20057377 - 20057296
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20057377 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 20057296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 35759754 - 35759641
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | |||||||||||||||  ||||||||||||||  |||||||||||||||||||||| |||||||||| |    
T  35759754 aatcacatcggaatgagagggatcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 35759655  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  35759654 agatgcatcttctt 35759641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 249 - 364
Target Start/End: Original strand, 10820587 - 10820702
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | | ||| |||||||||||| | ||| | |||| |||| ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  10820587 aaccgaatcacatcggagtgagagggattatgaggcggtgtatgtattggactacatggttgaaggaagatttataagaattgtttggtactacctatat 10820686  T
Q  349 caataagatgcatctt 364  Q
    ||||||||| ||||||    
T  10820687 caataagatacatctt 10820702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 286 - 365
Target Start/End: Original strand, 38340938 - 38341017
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttc 365  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||    
T  38340938 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 38341017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 43057674 - 43057556
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||||||  |||| | ||| ||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  43057674 aaccgaatcacatcggaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatat 43057575  T
Q  349 caataagatgcatcttctt 367  Q
     || |||||||||||||||    
T  43057574 taacaagatgcatcttctt 43057556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 2634924 - 2635037
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| |||||| |||||  ||||||||||||||||  |||||||||||||  ||| ||||||||||||||||||| |||||| ||| |    
T  2634924 aatcacatcggaatgagagggatcatgaggttgtgcaggtatgggactgcatggttgaaggataactcataagaattgtttggtactacctataccaaca 2635023  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  2635024 agatgcatcttctt 2635037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 20057833 - 20057752
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  |||||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20057833 gtgcaggtatgggactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 20057752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 20061305 - 20061224
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20061305 gtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 20061224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 35761060 - 35760947
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | ||||||||||| |||  ||||||||||||||  |||||||||||||||||||||| |||||||||| |    
T  35761060 aatcacatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaaca 35760961  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  35760960 agatgcatcttctt 35760947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 367
Target Start/End: Complemental strand, 31822816 - 31822696
Alignment:
Q  247 gcaaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctat 346  Q
    |||||||||||||||   ||||| |||||| ||||| | ||| ||||||| ||| ||||||||||||||||| ||||||||||| ||||||||| | |||    
T  31822816 gcaaccaaatcacatcagaatgagagggatcatgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattatttggtactacatat 31822717  T
Q  347 atcaataagatgcatcttctt 367  Q
    ||||| || ||||||||||||    
T  31822716 atcaacaatatgcatcttctt 31822696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 12883554 - 12883637
Alignment:
Q  284 ctgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||||  |||| ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  12883554 ctgtgcaggtatgggactgcatgattgaaggaatacttataagaattgtttggtactacctatatcaacaagatgcattttctt 12883637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 367
Target Start/End: Complemental strand, 30873085 - 30872983
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| ||||||| |||| | ||||||||||| |||   |||||||||||||||||| ||||||||||||| |||| |||||||||| ||||||||||||    
T  30873085 aatgagagggattctgaggccgtgcaggtatgagactgtatggttgaaggaagacttttaagaattgtttgatactacctatatcaacaagatgcatctt 30872986  T
Q  365 ctt 367  Q
    |||    
T  30872985 ctt 30872983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 367
Target Start/End: Original strand, 52250217 - 52250319
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| |||||| ||||| |  || ||||||||||| ||||||| |||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  52250217 aatgagagggatcatgaggccttgtaggtatgggactacatggtcgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatctt 52250316  T
Q  365 ctt 367  Q
    |||    
T  52250317 ctt 52250319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 20845775 - 20845694
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||  ||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||    
T  20845775 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttgttactacctatatcaacaagatgcatcttctt 20845694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 294 - 367
Target Start/End: Complemental strand, 50002813 - 50002740
Alignment:
Q  294 atgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  50002813 atgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 50002740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 7548091 - 7548204
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||||| ||||| |||||| ||||| | ||| ||||||| ||| ||||| || ||||||||||||||| |||||||||||| |  ||||||||| |    
T  7548091 aatcacattgcaatgagagggatcatgaggccgtgtaggtatgagactacatgattaaaggaagacttataaaaattgtttggtattaactatatcaaca 7548190  T
Q  354 agatgcatcttctt 367  Q
    |||||||| |||||    
T  7548191 agatgcatattctt 7548204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 16452043 - 16451966
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| ||||| |||||||||||||||  ||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  16452043 aggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttctt 16451966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 16461196 - 16461119
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| ||||| |||||||||||||||  ||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  16461196 aggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttctt 16461119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 20056926 - 20056849
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||  || |||||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  20056926 aggtatgggactgcagggttgaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcatcttctt 20056849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 43057175 - 43057098
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| ||| |||||||||||||||| |||| |||||||||||| |||| |||||||||| |||||||||||||||    
T  43057175 aggtatgtgactacatggttgaaggaaggcttagaagaattgtttgatactacctatatcaacaagatgcatcttctt 43057098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 46693831 - 46693768
Alignment:
Q  304 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  46693831 atggttgaaggaaggcttataaaaattgtttggtactacctatatcaacaagatgcatcttctt 46693768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 50003226 - 50003108
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||||||  |||| |  ||||||||| ||||  ||||||| |||| |||||||||| ||||||| |||||| |||||||    
T  50003226 aaccgaatcacatcggaatgagagggatcctgaggccatgcaggtataggactgcatggttaaagggagacttataataattgttgggtactacctatat 50003127  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  50003126 caacaagatgcatcttctt 50003108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 367
Target Start/End: Complemental strand, 20060431 - 20060373
Alignment:
Q  309 tgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20060431 tgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 20060373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 366
Target Start/End: Original strand, 23180730 - 23180842
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||||| ||||| ||||||  |||  | ||| ||| ||||||| || ||||||||||||   |||||||||||| |||||||| |||||||||| |    
T  23180730 aatcacattggaatgagagggatcttgaagccgtgtaggaatgggactacgtggttgaaggaatgattataagaattgcttggtactacctatatcaaca 23180829  T
Q  354 agatgcatcttct 366  Q
    ||||| |||||||    
T  23180830 agatgtatcttct 23180842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 304 - 364
Target Start/End: Complemental strand, 51372970 - 51372910
Alignment:
Q  304 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    |||||||||||||| |||||||||||||||| ||||| |||||||| | ||||||||||||    
T  51372970 atggttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatctt 51372910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 367
Target Start/End: Complemental strand, 16440687 - 16440612
Alignment:
Q  292 gtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||  |||||||||||| |||||||||||||| |||||| |||| || ||| ||| ||||||||| |||||    
T  16440687 gtatgggaatacatggttgaagaaagacttataagaactgtttgctactaccgataacaacaagatgcatattctt 16440612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 338
Target Start/End: Original strand, 42317616 - 42317709
Alignment:
Q  245 aggcaaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggta 338  Q
    ||||||||  |||| |||||||||| |||| ||||||||||||| | ||||| ||   || |||| ||||||  ||||||||||||||||||||    
T  42317616 aggcaaccggatcatattgaaatgagaggggttatgagactgtgtatgtatgagattgcacggttaaaggaatgcttataagaattgtttggta 42317709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 367
Target Start/End: Complemental strand, 31823161 - 31823117
Alignment:
Q  323 taagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||||    
T  31823161 taagaattatttggtactacctatatcaataaaatgcatcttctt 31823117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 361
Target Start/End: Complemental strand, 46411228 - 46411173
Alignment:
Q  306 ggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcat 361  Q
    |||||||| || | || |||||||| ||||||||| ||||||||||||||||||||    
T  46411228 ggttgaagaaaaatttttaagaattatttggtactacctatatcaataagatgcat 46411173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 340
Target Start/End: Complemental strand, 843073 - 842993
Alignment:
Q  260 attgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtact 340  Q
    |||||||||| |||||| ||||||  ||| ||||||| | |  |||| |||||||||| | | ||||||||||||||||||    
T  843073 attgaaatgagagggatcatgagatcgtgtaggtatgtgtctgcatgattgaaggaagtcgtgtaagaattgtttggtact 842993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 265 - 367
Target Start/End: Complemental strand, 8467929 - 8467827
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||||||||||  |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  8467929 aatgaaagggatcctgagactgtgcaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctataccaacaagatgcatctt 8467830  T
Q  365 ctt 367  Q
    |||    
T  8467829 ctt 8467827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 249 - 367
Target Start/End: Original strand, 3169201 - 3169319
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||| || ||||| | ||| ||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||    
T  3169201 aaccgaatcacatcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaagacttataaaaattgtttggtactacctatat 3169300  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  3169301 caacaagatgcatcttctt 3169319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 1645894 - 1645776
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||| ||  |||| | ||| ||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||    
T  1645894 aaccgaatcacatcggaatgagaggaatcttgaggccgtgtaggtatgggactacatggttgaaggaagacttataagaattgtttggtattacctatat 1645795  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  1645794 caacaagatgcatcttctt 1645776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 4127582 - 4127464
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||||||  |||| |  || ||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  4127582 aaccgaatcacatcggaatgagagggatcctgaggccatgtaggtatgggactacatagttgaaggaagacttataagaattgtttggtactacctatat 4127483  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  4127482 caacaagatgcatcttctt 4127464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 289 - 367
Target Start/End: Complemental strand, 44471430 - 44471352
Alignment:
Q  289 caggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  44471430 caggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctt 44471352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 253 - 367
Target Start/End: Original strand, 49998635 - 49998749
Alignment:
Q  253 aaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaat 352  Q
    ||||||||| | ||||| ||||||  | || ||||| ||| |||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||     
T  49998635 aaatcacatcggaatgagagggatcctaaggctgtgtaggcatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaac 49998734  T
Q  353 aagatgcatcttctt 367  Q
    |||||||||||||||    
T  49998735 aagatgcatcttctt 49998749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 12692107 - 12692026
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  12692107 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 12692026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 249 - 358
Target Start/End: Complemental strand, 29628812 - 29628703
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| ||||||| ||||||  |||| | ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  29628812 aaccgaatcacatcgaaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatat 29628713  T
Q  349 caataagatg 358  Q
    ||| ||||||    
T  29628712 caacaagatg 29628703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 50398678 - 50398565
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | ||| |||||| |||| |||||||||||||||| |||||||||||||||||||||| |||||||||| |    
T  50398678 aatcacatcggaatgagagggatcctgaggccgtgtaggtataggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 50398579  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  50398578 agatgcatcttctt 50398565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 14572254 - 14572177
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  14572254 aggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 14572177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 50399133 - 50399020
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||||| ||| ||||||| ||  |||||||||||||||| |||||||||||||||||||||| |||||||||| |    
T  50399133 aatcacatcggaatgagagggatcctgagaccgtgtaggtatgagattacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 50399034  T
Q  354 agatgcatcttctt 367  Q
     |||||||||||||    
T  50399033 cgatgcatcttctt 50399020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 51331421 - 51331308
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||| || ||||| | ||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||  ||||||||| |    
T  51331421 aatcacatcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactatctatatcaaca 51331322  T
Q  354 agatgcatcttctt 367  Q
    |||| |||||||||    
T  51331321 agatacatcttctt 51331308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 367
Target Start/End: Complemental strand, 14571850 - 14571748
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||||||||||  |||| | ||| |||||||||||  |||||||||||| |  |||||||||||||||||||||| |||||||||| ||||||||||||    
T  14571850 aatgaaagggatcttgagtccgtgtaggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatctt 14571751  T
Q  365 ctt 367  Q
    |||    
T  14571750 ctt 14571748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 367
Target Start/End: Complemental strand, 23350388 - 23350310
Alignment:
Q  289 caggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||| |||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  23350388 caggtaggggactgcatggttgaaggaaggcttataagaattgtttggtacttcctatatcaacaagatgcatcttctt 23350310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 23942934 - 23942816
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||||||  || | | ||| |||||||| || |||||||||||||||  |||||||||||||||||||||| |||||||    
T  23942934 aaccgaatcacatcggaatgagagggatcctggggccgtgtaggtatggaactacatggttgaaggaaagcttataagaattgtttggtactacctatat 23942835  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  23942834 caacaagatgcatcttctt 23942816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 7678726 - 7678649
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||| | |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  7678726 aggtatggggctacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctt 7678649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 4127979 - 4127916
Alignment:
Q  304 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  4127979 atggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 4127916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 21067766 - 21067837
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagat 357  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||| || |||||||||| |||||    
T  21067766 gtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtgctacctatatcaacaagat 21067837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 367
Target Start/End: Original strand, 1464158 - 1464260
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| |||||| ||| ||| ||| ||||||| ||  |||| |||||| ||| ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  1464158 aatgagagggatcatgcgaccgtgtaggtatgagaatacatagttgaaagaaaacttataagaattgtttggtactacctatatcaacaagatgcatctt 1464257  T
Q  365 ctt 367  Q
    |||    
T  1464258 ctt 1464260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 27026535 - 27026613
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||||||||||||| ||| | |||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||||    
T  27026535 gtgcaggtatgggactacacgattgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcatctt 27026613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 9423966 - 9423885
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| |||||||||  |||||||||| |||| ||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  9423966 gtgcatgtatgggactgcatggttgaaagaaggcttataataattgtttggtactacctatatcaacaagatgcatcttctt 9423885  T

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Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 24629537 - 24629460
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||  ||||||| ||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  24629537 aggtatgggactgcatggttaaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 24629460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 31817992 - 31817879
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||| | ||||||||||||    |||| |||||||||  ||||||||||||||| ||||||||||||||| |||||| |||||| ||| |    
T  31817992 aatcacatcggaataagagggattatgaggtcatgcatgtatgggactgcatggttgaaggaaggcttataagaattgttcggtactacctataccaaca 31817893  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  31817892 agatgcatcttctt 31817879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 21220421 - 21220358
Alignment:
Q  304 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  21220421 atggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 21220358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 361
Target Start/End: Original strand, 35871628 - 35871735
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | || ||||||||||||  ||||||||||||||| |||||| ||||||||||||||  |||||||||| |    
T  35871628 aatcacatcggaatgagagggatcctgaggccgtacaggtatgggacttcatggttgaaggaaggcttatatgaattgtttggtaccacctatatcaaca 35871727  T
Q  354 agatgcat 361  Q
    ||||||||    
T  35871728 agatgcat 35871735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 13266118 - 13266196
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||||||||||||   ||||||||||||||| ||||||| |||| ||| ||||| |||||||||||||||||||||||    
T  13266118 gtgcaggtatgggaatgcatggttgaaggaaggcttataataattttttagtactccctatatcaataagatgcatctt 13266196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 253 - 367
Target Start/End: Original strand, 41869917 - 41870031
Alignment:
Q  253 aaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaat 352  Q
    ||||||||| | | ||| ||||||  ||||||||| ||  ||||||||  |||| ||||||||||||||||||||||||| || |||| ||||||||||     
T  41869917 aaatcacatcggagtgagagggatcctgagactgtacatatatgggactgcatgattgaaggaagacttataagaattgtatgatactacctatatcaac 41870016  T
Q  353 aagatgcatcttctt 367  Q
    |||| ||||||||||    
T  41870017 aagacgcatcttctt 41870031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 304 - 366
Target Start/End: Complemental strand, 44470964 - 44470902
Alignment:
Q  304 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttct 366  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  44470964 atggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 44470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 293 - 367
Target Start/End: Complemental strand, 53996216 - 53996142
Alignment:
Q  293 tatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||| |||||||||||||||  ||||||| |||||||||||||| |||||||||| ||||| |||||||||    
T  53996216 tatgggactacatggttgaaggaatgcttataaaaattgtttggtactacctatatcaacaagattcatcttctt 53996142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 23943334 - 23943269
Alignment:
Q  302 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||||||||||| || | ||||||||| |||||||||| |||||||||||||||    
T  23943334 acatggttgaaggaagacttataaaaaatatttggtactacctatatcaacaagatgcatcttctt 23943269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 17628560 - 17628624
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||| || |||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  17628560 catggttgaaggtaggcttataagaattgtttggtactacctataccaacaagatgcatcttctt 17628624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 367
Target Start/End: Original strand, 27029310 - 27029390
Alignment:
Q  287 tgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||| ||| ||| ||| | ||||||||||||||||||||||| ||||||||| | |||||||| |||||||||||||||    
T  27029310 tgcaggaatgagactacacgattgaaggaagacttataagaattatttggtactacttatatcaacaagatgcatcttctt 27029390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 249 - 340
Target Start/End: Complemental strand, 53854952 - 53854861
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtact 340  Q
    |||| |||||||| | ||||| |||||| ||||  | ||| ||||||| ||| | |||||||||||||||||||||||||||||||||||||    
T  53854952 aaccgaatcacatcggaatgagagggatcatgaagcagtgtaggtatgagactatatggttgaaggaagacttataagaattgtttggtact 53854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 24629084 - 24629004
Alignment:
Q  290 aggtatgggacaacatggttgaaggaa---gacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||  ||||||| ||||||   | |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  24629084 aggtatgggactgcatggttaaaggaattaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 24629004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 21067314 - 21067395
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| ||||| |||  |||||||||||||||||| |||| |||| ||||||||| | |||||||| |||||||||||||||    
T  21067314 gtgcatgtatgagactgcatggttgaaggaagactaataataattatttggtactacatatatcaacaagatgcatcttctt 21067395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 23976323 - 23976246
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||| |  |||| ||||||||||| ||||||||||||||||||||| ||||||  || |||||||||||||||    
T  23976323 aggtatgggtctgcatgattgaaggaagagttataagaattgtttggtactacctatactaacaagatgcatcttctt 23976246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 279 - 364
Target Start/End: Original strand, 42838648 - 42838733
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    |||||||||| | ||||| ||| |||| ||| ||||||||| ||||| |||||||||||||| |||||||||| || |||||||||    
T  42838648 tgagactgtgtaagtatgagactacatagttcaaggaagacgtataaaaattgtttggtactacctatatcaacaaaatgcatctt 42838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 367
Target Start/End: Complemental strand, 15306226 - 15306118
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattg------tttggtactgcctatatcaataagatg 358  Q
    ||||| ||||||  |||| ||||| ||||||||||| ||||||| ||| |||||||||||||| |||      ||||||||| ||||||| || ||||||    
T  15306226 aatgagagggatcctgaggctgtgtaggtatgggactacatggtcgaaagaagacttataagatttgagcaattttggtactacctatataaacaagatg 15306127  T
Q  359 catcttctt 367  Q
    |||||||||    
T  15306126 catcttctt 15306118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 31817538 - 31817425
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| ||||| | |||||| |||||   ||||| ||||| |||  ||||||||||||||   |||||| |||||||||||||| |||||| ||| |    
T  31817538 aatcacatcgaaataagagggatcatgaggtcgtgcatgtatgagacttcatggttgaaggaacgtttataataattgtttggtactacctataccaaca 31817439  T
Q  354 agatgcatcttctt 367  Q
    | ||||||||||||    
T  31817438 aaatgcatcttctt 31817425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 367
Target Start/End: Original strand, 33764908 - 33764973
Alignment:
Q  302 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||| | |||||||| ||||||||||||||| || |||||| ||| |||||||||||||||    
T  33764908 acatggttggatgaagacttttaagaattgtttggtgctacctataccaacaagatgcatcttctt 33764973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 13613988 - 13613924
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||| ||||||  |||||||||||||||||| |||  |||||||||| |||||||||||||||    
T  13613988 catggtagaaggagtacttataagaattgtttgataccacctatatcaacaagatgcatcttctt 13613924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 14351844 - 14351908
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||| ||| ||||| || |||||||||  ||||||||| |||||||||||||||    
T  14351844 catggttgaaggaaggcttgtaagagttttttggtactatctatatcaacaagatgcatcttctt 14351908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 20309663 - 20309595
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaag 317  Q
    |||| |||||||| | ||||| |||||| |||||||| |||||||||| ||| ||||||||||||||||    
T  20309663 aaccgaatcacatcggaatgagagggatcatgagactttgcaggtatgtgactacatggttgaaggaag 20309595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 367
Target Start/End: Original strand, 17629018 - 17629081
Alignment:
Q  304 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||  || ||||||||||||||||||||||| ||||||  |||||||||| |||||||    
T  17629018 atggttgaataaaaacttataagaattgtttggtactacctatactaataagatgcctcttctt 17629081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 320 - 367
Target Start/End: Complemental strand, 50814899 - 50814852
Alignment:
Q  320 ttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatcttctt 50814852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 20306241 - 20306191
Alignment:
Q  314 gaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    |||| ||||||||||||||||||||||  ||||||||| ||||||||||||    
T  20306241 gaaggcttataagaattgtttggtactatctatatcaacaagatgcatctt 20306191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 367
Target Start/End: Complemental strand, 27578998 - 27578936
Alignment:
Q  305 tggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||  ||||||||||||||||||||||||||| | ||||||||| |||  |||||||||    
T  27578998 tggttgactgaagacttataagaattgtttggtactacatatatcaattagacacatcttctt 27578936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 26200396 - 26200312
Alignment:
Q  285 tgtgcaggtatgggacaacatggttgaaggaaga--cttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| |||||||||||| ||||||||||||||||  ||||||| ||||||||| ||||  |||||  || ||||||||| |||||    
T  26200396 tgtgtaggtatgggacatcatggttgaaggaagaggcttataacaattgtttgatactaactatacaaacaagatgcatattctt 26200312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 43929071 - 43928990
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| ||| |  |||| |||||||  |||| ||||||||||||||||| | |||| ||| |||||||||||||||    
T  43929071 gtgcaggtatgagactatttggtcgaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatcttctt 43928990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 367
Target Start/End: Original strand, 4185748 - 4185828
Alignment:
Q  287 tgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||| |||  ||||||| |||||| || ||||||||||||||| |||  | |||| ||| |||||||||||||||    
T  4185748 tgcaggtatgagacggcatggttaaaggaatacatataagaattgtttgataccacatataccaacaagatgcatcttctt 4185828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 367
Target Start/End: Original strand, 9882619 - 9882720
Alignment:
Q  264 aaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatct 363  Q
    |||||| | |||| ||||||| ||||| | ||| ||||| |||||||||| || ||||||||||||  ||||||||| |||||   ||||| ||||||||    
T  9882619 aaatgagacggatcatgagaccgtgcaagcatgagacaagatggttgaagaaaaacttataagaat--tttggtactacctatcctaataaaatgcatct 9882716  T
Q  364 tctt 367  Q
    ||||    
T  9882717 tctt 9882720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 24271659 - 24271583
Alignment:
Q  285 tgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcat 361  Q
    |||||||||||| ||| |||||||| ||| ||||| |||||||||| |||| |||| ||||||  || |||||||||    
T  24271659 tgtgcaggtatgagactacatggttaaagtaagacatataagaattatttgatactacctatacgaacaagatgcat 24271583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 340
Target Start/End: Complemental strand, 2499723 - 2499648
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtact 340  Q
    ||||| ||||||| | | || ||||||||||| |||  ||||||||||| || |||||||| ||||||||||||||    
T  2499723 aatgagagggattctaaaaccgtgcaggtatgagacttcatggttgaagcaacacttataaaaattgtttggtact 2499648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 367
Target Start/End: Complemental strand, 27578531 - 27578484
Alignment:
Q  320 ttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||| || |||||||||| |||||||||||||||    
T  27578531 ttataagaattatttggtgctacctatatcaacaagatgcatcttctt 27578484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 364
Target Start/End: Original strand, 17028907 - 17028984
Alignment:
Q  287 tgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    |||| |||||||||  ||| ||||||||| || || ||||||||||| ||| || |||||||||| ||||||| ||||    
T  17028907 tgcatgtatgggactgcatagttgaaggaggatttgtaagaattgttaggtgctacctatatcaacaagatgcgtctt 17028984  T

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Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 6719225 - 6719107
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||||| ||||| ||||||  |||| ||||| ||||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||    
T  6719225 aaccgaatcacattggaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaatgcttataagaattgtttggtactacctatat 6719126  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  6719125 caacaagatgcatcttctt 6719107  T

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Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 279 - 366
Target Start/End: Original strand, 2193281 - 2193368
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttct 366  Q
    |||||| |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  2193281 tgagaccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 2193368  T

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Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 6747744 - 6747631
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||||| ||||| ||||||  |||| | ||| |||||||  || ||||||||||||||||  ||||||||||||||||||||| |||||||||| |    
T  6747744 aatcacattggaatgagagggatcctgaggccgtgtaggtatgatactacatggttgaaggaaggattataagaattgtttggtactacctatatcaaca 6747645  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  6747644 agatgcatcttctt 6747631  T

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Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 279 - 364
Target Start/End: Original strand, 25182386 - 25182471
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    |||||||||||| ||||| |||  |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||    
T  25182386 tgagactgtgcaagtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatacatctt 25182471  T

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Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 28495854 - 28495967
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | ||| ||||||||||| |||||||||||||||| |||||||||| |||| |||||| |||||||||| |    
T  28495854 aatcacatcggaatgagagggatcttgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaaca 28495953  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  28495954 agatgcatcttctt 28495967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 36422288 - 36422365
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  36422288 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctt 36422365  T

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Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 42515092 - 42515205
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | ||||||||||| |||  |||| ||||||||||||||||||||||||||||||||| |||||||||| |    
T  42515092 aatcacatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaagacttataagaattgtttggtactacctatatcaaca 42515191  T
Q  354 agatgcatcttctt 367  Q
    |||||||| |||||    
T  42515192 agatgcattttctt 42515205  T

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Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 13125249 - 13125169
Alignment:
Q  287 tgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||    
T  13125249 tgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttctt 13125169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 367
Target Start/End: Complemental strand, 2941868 - 2941790
Alignment:
Q  289 caggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||  ||||||||||||||| || ||||||||||||||||||| |||||||||| |||||||||||||||    
T  2941868 caggtatgggactgcatggttgaaggaaggctgataagaattgtttggtactacctatatcaacaagatgcatcttctt 2941790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 367
Target Start/End: Original strand, 42515555 - 42515657
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| ||||||  |||| | ||| ||||||| ||| |||||||||||||||| |||||||||| ||||||||||| |||||||||| ||||||||||||    
T  42515555 aatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaagtgtttggtactacctatatcaacaagatgcatctt 42515654  T
Q  365 ctt 367  Q
    |||    
T  42515655 ctt 42515657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 2465773 - 2465846
Alignment:
Q  294 atgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||||    
T  2465773 atgggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttctt 2465846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 2465960 - 2466037
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||||||| |||||||||| ||| |||||||||||    
T  2465960 aggtatgggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttctt 2466037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 34405701 - 34405624
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| | |||||||||||||    
T  34405701 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaggatgcatcttctt 34405624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 46425741 - 46425854
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  ||||||  || ||||||||||| |||||||||||  ||| |||||||||||||||||||| | |||||||||| |    
T  46425741 aatcacatcggaatgagagggatcctgagaccatgtaggtatgggactacatggttgaaataaggcttataagaattgtttggtattacctatatcaaca 46425840  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  46425841 agatgcatcttctt 46425854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 279 - 367
Target Start/End: Original strand, 2189169 - 2189257
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| |||||||||| ||||||  |||||||||| |||| |||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  2189169 tgaggctgtgcaggtgtgggactgcatggttgaaagaaggcttataagaattgtttggcactacctatatcaacaagatgcatcttctt 2189257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 249 - 364
Target Start/End: Original strand, 43233408 - 43233523
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||  ||||||| |||||| ||||| | ||| ||||||| |||   |||||| ||||||||||||||||||||||||||||||  ||||||    
T  43233408 aaccgaatcacaccgaaatgagagggatcatgaggccgtgtaggtatgtgactgtatggttaaaggaagacttataagaattgtttggtactatctatat 43233507  T
Q  349 caataagatgcatctt 364  Q
    ||| ||||||||||||    
T  43233508 caacaagatgcatctt 43233523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 5406702 - 5406624
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    |||| ||||||||||  |||||||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||    
T  5406702 gtgccggtatgggactgcatggttgaaggaagatttataagaattgtttggtattacctatatcaacaagatgcatctt 5406624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 351
Target Start/End: Complemental strand, 26957708 - 26957606
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||||||  |||| ||||| |||||||| || ||||||||||| |||| |||||||||||||||||||||| |||||||    
T  26957708 aaccgaatcacatcggaatgagagggatcttgaggctgtgtaggtatggaactacatggttgaaagaaggcttataagaattgtttggtactacctatat 26957609  T
Q  349 caa 351  Q
    |||    
T  26957608 caa 26957606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 363
Target Start/End: Complemental strand, 11517534 - 11517426
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | || ||||||||||||  |||||| |||||||| |||||||||||||||||||||| |||||||||| |    
T  11517534 aatcacatcggaatgagagggatcctgaggccgtacaggtatgggactgcatggt-gaaggaaggcttataagaattgtttggtactacctatatcaaca 11517436  T
Q  354 agatgcatct 363  Q
    ||||||||||    
T  11517435 agatgcatct 11517426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 28495718 - 28495641
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||  | |||||||||| |||||||||||||||    
T  28495718 aggtatgggactacatggttgaaggaagacttataagaattgttgagttttacctatatcaacaagatgcatcttctt 28495641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 29357570 - 29357489
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||   |||||||||||||||||||||  ||||||||| |||||||||||||||    
T  29357570 gtgcaggtatgggactgcatggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatcttctt 29357489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 35474231 - 35474154
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||| ||||| | |||||||| |||||||||||||||    
T  35474231 aggtatgagactacatggttgaagaaagacttataagaattgtttagtactacttatatcaacaagatgcatcttctt 35474154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 9124991 - 9125072
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||   |||||| ||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  9124991 gtgcaggtatgagactgtatggttaaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 9125072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 367
Target Start/End: Complemental strand, 22529343 - 22529268
Alignment:
Q  292 gtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| | |||||||||||||||| |||||||||| |||||||||||  |||||| || |||||||||||||||    
T  22529343 gtatgggcctacatggttgaaggaaggcttataagaaatgtttggtactatctatataaacaagatgcatcttctt 22529268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 290 - 361
Target Start/End: Complemental strand, 26421415 - 26421344
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcat 361  Q
    ||||||||| ||  |||||||||||||||||||||||||||| ||| |||| |||||||||| |||||||||    
T  26421415 aggtatgggtcagtatggttgaaggaagacttataagaattgcttgatactacctatatcaacaagatgcat 26421344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 13124847 - 13124761
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtact 340  Q
    ||||| |||| ||||| ||||||  |||| | |||||||||||||||  ||||||||||||||| |||||||||||||| |||||||    
T  13124847 aatcatattggaatgagagggatcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtgtggtact 13124761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 679853 - 679929
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||  |||||| ||||||||| ||||||||||||| |||||||| |||||||||| ||||||||| |||||    
T  679853 aggtatgggagtacatggctgaaggaaggcttataagaattg-ttggtactacctatatcaacaagatgcatattctt 679929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 2611762 - 2611685
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| ||| | ||||| |||||||| ||||||||||||||||||||||  ||||| ||| |||||||||||||||    
T  2611762 aggtatgagactatatggtggaaggaaggcttataagaattgtttggtactatctataacaacaagatgcatcttctt 2611685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 18833321 - 18833399
Alignment:
Q  289 caggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||| ||  ||||||||| ||||  |||||| ||||||||| ||||| |||||||||| |||||||||||||||    
T  18833321 caggtatggaactgcatggttgagggaaagcttatatgaattgtttagtactacctatatcaacaagatgcatcttctt 18833399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 293 - 367
Target Start/End: Complemental strand, 29039127 - 29039053
Alignment:
Q  293 tatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| ||| ||||||||||| | || |||| ||||||||||||||||| |||||||||| || ||||||||||||    
T  29039127 tatgtgactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttctt 29039053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 305 - 367
Target Start/End: Complemental strand, 35527216 - 35527154
Alignment:
Q  305 tggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||| |||| ||||||||||||||||||| || |||||||||| ||||||||| |||||    
T  35527216 tggttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcatattctt 35527154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 36015525 - 36015444
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| ||||| |||  ||||||||||||||  |||| ||||||||||||||||| | |||||||| ||||||| |||||||    
T  36015525 gtgcaagtatgagactccatggttgaaggaaagcttaaaagaattgtttggtactacatatatcaacaagatgcctcttctt 36015444  T

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Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 9623257 - 9623321
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||| ||||||  |||||||||||||||||| |||  |||||||||| |||||||||||||||    
T  9623257 catggtagaaggagtacttataagaattgtttgataccacctatatcaacaagatgcatcttctt 9623321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 31743921 - 31743857
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||  ||||||||||| ||||||| ||  ||||||||| |||||||||||||||    
T  31743921 catggttgaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatcttctt 31743857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 31406680 - 31406617
Alignment:
Q  304 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||| || ||||||| |||||||||||||  | |||||||||| |||||||||||||||    
T  31406680 atggttgaaagatgacttattagaattgtttggtgttacctatatcaacaagatgcatcttctt 31406617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 3305463 - 3305374
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggta 338  Q
    |||| |||||||| |||||||  |||||  |||| | ||| | ||||||||| ||||||||||| |||| ||||| ||||||||||||||    
T  3305463 aaccgaatcacatcgaaatgagggggatcctgaggccgtgtaagtatgggactacatggttgaatgaaggcttatgagaattgtttggta 3305374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 361
Target Start/End: Original strand, 11372501 - 11372558
Alignment:
Q  304 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcat 361  Q
    |||||||||||||| |||||||||||||||||||||| ||| || ||| | |||||||    
T  11372501 atggttgaaggaaggcttataagaattgtttggtactacctgtaccaacatgatgcat 11372558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 26421874 - 26421793
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| ||||| |||  ||||||||||| ||| || |||||||||||| |||||| |||||| ||| |||||| ||||||||    
T  26421874 gtgcatgtatgagactgcatggttgaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatcttctt 26421793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 33316760 - 33316809
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttg 335  Q
    ||||||||||| ||| ||||||||||||||| | ||||||||||||||||    
T  33316760 gtgcaggtatgagactacatggttgaaggaaaaattataagaattgtttg 33316809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 355
Target Start/End: Original strand, 2490064 - 2490140
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataag 355  Q
    ||||| |||||| ||||| |||  |||| |||||||||  |||||||||| |||||| |||| ||||||||||||||    
T  2490064 tgagattgtgcacgtatgtgactgcatgattgaaggaatgcttataagaagtgtttgttactacctatatcaataag 2490140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 351
Target Start/End: Original strand, 6585657 - 6585705
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaa 351  Q
    |||| ||||| |||||||||||| |||||||||||||| ||||||||||    
T  6585657 catgattgaaagaagacttataaaaattgtttggtactacctatatcaa 6585705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 16192368 - 16192430
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttc 365  Q
    |||| ||||| ||||  ||||||||||||||||||| | |||| ||||| |||||||||||||    
T  16192368 catgattgaatgaaggattataagaattgtttggtattacctacatcaacaagatgcatcttc 16192430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 340
Target Start/End: Complemental strand, 16811956 - 16811906
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtact 340  Q
    ||||||| ||| |||||||||||||||  |||||||||||||||| |||||    
T  16811956 aggtatgagactacatggttgaaggaatgcttataagaattgttttgtact 16811906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 367
Target Start/End: Original strand, 1628719 - 1628826
Alignment:
Q  257 cacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataaga 356  Q
    ||||||| ||||| ||||||  |||  | |||||| |||||||   ||||||||||| ||| |||||||   ||||||||||||  | ||||||| ||||    
T  1628719 cacattggaatgagagggatgttgaagccgtgcagatatgggattgcatggttgaagaaaggcttataa---ttgtttggtactatcgatatcaacaaga 1628815  T
Q  357 tgcatcttctt 367  Q
    |||||||||||    
T  1628816 tgcatcttctt 1628826  T

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Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 17445606 - 17445488
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| ||||||| ||||||  |||| | ||| ||| ||||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  17445606 aaccgaatcacatcgaaatgagagggatcctgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatat 17445507  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  17445506 caacaagatgcatcttctt 17445488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 10927554 - 10927436
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||||||  |||| | ||| ||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  10927554 aaccgaatcacatcggaatgagagggatcttgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatat 10927455  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  10927454 caacaagatgcatcttctt 10927436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 34867822 - 34867903
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  34867822 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 34867903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 39146939 - 39147052
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| ||||||| |||||| ||||| | ||| ||||||||||| ||||||||||||| |||||||||||||||||||| |||| | ||||| || |    
T  39146939 aatcacatcgaaatgagagggatcatgaggccgtgtaggtatgggactacatggttgaaggtagacttataagaattgtttgatactacttatattaaca 39147038  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  39147039 agatgcatcttctt 39147052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 290 - 365
Target Start/End: Complemental strand, 10927056 - 10926981
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttc 365  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||    
T  10927056 aggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 10926981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 367
Target Start/End: Original strand, 2193827 - 2193929
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| |||||| ||||| |  || ||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  2193827 aatgagagggatcatgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatctt 2193926  T
Q  365 ctt 367  Q
    |||    
T  2193927 ctt 2193929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 20039625 - 20039507
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| |||||| ||||| | ||| |||||| |||| |||| ||||||||||| |||||||||||||||||||||| |||||||    
T  20039625 aaccgaatcacatcggaatgagagggatcatgaggccgtgtaggtataggactacatagttgaaggaaggcttataagaattgtttggtactacctatat 20039526  T
Q  349 caataagatgcatcttctt 367  Q
    ||| ||||||||| |||||    
T  20039525 caacaagatgcattttctt 20039507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 21886261 - 21886179
Alignment:
Q  285 tgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||| | |||||||| |||||||||||||||    
T  21886261 tgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacatatatcaacaagatgcatcttctt 21886179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 1821938 - 1822019
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  1821938 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 1822019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 8642148 - 8642067
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  8642148 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatgcatcttctt 8642067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 22556568 - 22556649
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  22556568 gtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactacctatatcaacaagatgcatcttctt 22556649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 2474008 - 2474072
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2474008 catggttgaaggaaggcttataagaattgtttggtactgcctatatcaacaagatgcatcttctt 2474072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 295 - 367
Target Start/End: Complemental strand, 42788751 - 42788679
Alignment:
Q  295 tgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  42788751 tgggactacatggttgaaagaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctt 42788679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 293 - 367
Target Start/End: Original strand, 2474444 - 2474518
Alignment:
Q  293 tatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||  |||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||    
T  2474444 tatgggactgcatggttgaaggaagacttaaaagaattgtttggtactacctatatcaacaagatgcatcttctt 2474518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 367
Target Start/End: Complemental strand, 3887168 - 3887090
Alignment:
Q  289 caggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||  |||||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||    
T  3887168 caggtatgggactgcatggttgaaggaagacttatatgaattatttggtactacctatatcaacaagatgcatcttctt 3887090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 8391472 - 8391355
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||||||| |||| | ||| ||| ||| ||| ||||| ||||||||||||||||||||||||||||||||| ||| |||    
T  8391472 aaccgaatcacatcggaatgagagggattctgaggccgtgtaggcatgagactacatgattgaaggaagacttataagaattgtttggtact-cctgtat 8391374  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  8391373 caacaagatgcatcttctt 8391355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 189068 - 189181
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | || || |||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |    
T  189068 aatcacatcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 189167  T
Q  354 agatgcatcttctt 367  Q
    ||||| ||||||||    
T  189168 agatgtatcttctt 189181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 22557001 - 22557082
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||| ||||||||||||||| || ||||||| |||||||||||||||    
T  22557001 gtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactaccaatatcaacaagatgcatcttctt 22557082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 27646945 - 27646868
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  27646945 aggtatggggctacatggttgaaggaaggcttataagaattgtttggtactacctataacaacaagatgcatcttctt 27646868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 292 - 367
Target Start/End: Original strand, 34372106 - 34372181
Alignment:
Q  292 gtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||| |||||||||||||||  |||| ||||||||||||||||| |||||||||| |||||||||||||||    
T  34372106 gtatgggactacatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttctt 34372181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 245 - 367
Target Start/End: Complemental strand, 24182400 - 24182278
Alignment:
Q  245 aggcaaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcct 344  Q
    ||||||| ||||||||||  ||||| ||||||  |||||  ||||| ||||| ||| | |||||||||||||| |||||||||||| |||||||||  ||    
T  24182400 aggcaacgaaatcacattagaatgagagggatcttgagaacgtgcaagtatgagacgaaatggttgaaggaaggcttataagaattatttggtactatct 24182301  T
Q  345 atatcaataagatgcatcttctt 367  Q
    ||| ||| |||||||||||||||    
T  24182300 ataccaacaagatgcatcttctt 24182278  T

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Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 15513164 - 15513045
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaaga--cttataagaattgtttggtactgcctat 346  Q
    |||| |||||||| | ||||| |||||| || || ||||| ||||||||||| ||||||||||||||| |  ||||||||||||| |||||||| || ||    
T  15513164 aaccgaatcacatcggaatgagagggatcattaggctgtgtaggtatgggactacatggttgaaggaatatgcttataagaattg-ttggtactaccaat 15513066  T
Q  347 atcaataagatgcatcttctt 367  Q
    ||||| |||||||||||||||    
T  15513065 atcaacaagatgcatcttctt 15513045  T

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Target: chr5; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 285 - 367
Target Start/End: Complemental strand, 30719920 - 30719838
Alignment:
Q  285 tgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||| |||||||||| ||| ||||||||||| |||||| ||||||||||||||| ||||||  || |||||||||||||||    
T  30719920 tgtgcaagtatgggacatcattgttgaaggaaggcttatatgaattgtttggtactacctataaaaacaagatgcatcttctt 30719838  T

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Target: chr5; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 34371647 - 34371725
Alignment:
Q  289 caggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| ||||||  ||||||||||||||  |||| ||||||||||||||||| |||||||||| |||||||||||||||    
T  34371647 caggtgtgggactgcatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttctt 34371725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 367
Target Start/End: Original strand, 42429170 - 42429258
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||| ||| ||||||| ||  |||||||||||||| |||||||||||||||||||||||| ||| |||||| || |||||| |||||    
T  42429170 tgagaccgtgtaggtatgtgaacacatggttgaaggaggacttataagaattgtttggtactacctttatcaacaatatgcatattctt 42429258  T

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Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 367
Target Start/End: Complemental strand, 3886709 - 3886634
Alignment:
Q  292 gtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||  |||||| |||||||  |||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  3886709 gtatgggactgcatggtagaaggaatgcttatatgaattgtttggtactacctatatcaacaagatgcatcttctt 3886634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 18750310 - 18750229
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||| ||| ||  |||||||||||||||  |||||| |||||||||||||| |||||| ||| |||||||||||||||    
T  18750310 gtgcaggtttggaactgcatggttgaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttctt 18750229  T

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Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 2058748 - 2058696
Alignment:
Q  308 ttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgca 360  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  2058748 ttgaaggaagacttatatgaattgtttggtactacctatatcaacaagatgca 2058696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 16370805 - 16370741
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||| |||| | ||||||||    
T  16370805 catggttgaaggaaaacttataagaattgtttggtactacttatatcaacaagacgtatcttctt 16370741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 30684707 - 30684589
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    ||||||||||||| | |||||  |||||  ||||  |||||| |||||| ||| ||| |||||||| || |||||| |||||||||||||||  |||||     
T  30684707 aaccaaatcacatcggaatgagggggatcctgaggttgtgcaagtatggaacatcattgttgaagggaggcttatatgaattgtttggtactatctataa 30684608  T
Q  349 caataagatgcatcttctt 367  Q
     || |||||||||||||||    
T  30684607 aaacaagatgcatcttctt 30684589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 4658138 - 4658026
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| ||||| | ||||||  ||| || ||||||||||| |||  |||||||||| ||||| |||||||| ||||||| |||| |||||| ||| |    
T  4658138 aatcacatcgaaataagagggatcttgaaaccgtgcaggtatgagacttcatggttgaacgaaga-ttataagacttgtttgatactacctataacaaca 4658040  T
Q  354 agatgcatcttctt 367  Q
    | ||||||||||||    
T  4658039 acatgcatcttctt 4658026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 11160779 - 11160714
Alignment:
Q  302 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| ||||||||||| ||||||| ||||||||||||||  |||| |||| ||||||||| |||||    
T  11160779 acatagttgaaggaaggcttataataattgtttggtactatctatgtcaacaagatgcatattctt 11160714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 18304467 - 18304544
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||| ||| | ||  ||||||  |||||||||||||| |||||||||| ||||||||| |||||    
T  18304467 aggtatgggactacatggatgatgaaaagcttatataaattgtttggtactacctatatcaacaagatgcatattctt 18304544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 5066980 - 5066924
Alignment:
Q  311 aaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||| ||||||||||||||||||||| |  ||||||||| ||||||||| |||||    
T  5066980 aaggaaaacttataagaattgtttggtattatctatatcaacaagatgcattttctt 5066924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 367
Target Start/End: Complemental strand, 20858633 - 20858574
Alignment:
Q  308 ttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||| ||| |||||||||||||||||||| |  ||||||||| ||||||| |||||||    
T  20858633 ttgaagaaaggcttataagaattgtttggtattttctatatcaacaagatgcttcttctt 20858574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 29680210 - 29680140
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||| ||||||||       ||||| | |||||||||| |||||||||||||||    
T  29680210 aggtatgggactacatggttgaaggaaggcttataag-------tggtaatacctatatcaacaagatgcatcttctt 29680140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 4673569 - 4673504
Alignment:
Q  302 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| |||||||||| |||||||||||| |||||||   ||| |||||| ||||||||| |||||    
T  4673569 acatgattgaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctt 4673504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 334
Target Start/End: Complemental strand, 22975156 - 22975076
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgttt 334  Q
    |||||||| | ||||| ||||||  |||| | ||||||||||| |||  ||||||||||| ||  ||||||||||||||||    
T  22975156 aatcacatcggaatgagagggatcctgaggccgtgcaggtatgtgactgcatggttgaagaaaagcttataagaattgttt 22975076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 364
Target Start/End: Complemental strand, 39801578 - 39801498
Alignment:
Q  285 tgtgcaggtatgggacaacatggttgaaggaagactta-taagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    |||||| ||||| ||| | |||||| || ||||||||  ||| ||| |||||||||| |||||||||| ||||||||||||    
T  39801578 tgtgcaagtatgagactatatggttaaaagaagactttctaaaaatcgtttggtactacctatatcaacaagatgcatctt 39801498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 43356732 - 43356653
Alignment:
Q  287 tgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||| |||  |||| |||| ||| |||||||||||||||||||||||  |||| | ||| || ||||||||||||    
T  43356732 tgcaggtatgagactgcatgattga-ggatgacttataagaattgtttggtacaacctaaaccaacaatatgcatcttctt 43356653  T

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Target: scaffold0040 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 2324 - 2243
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  2324 gtgcaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 2243  T

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Target: chr8 (Bit Score: 66; Significance: 4e-29; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 41659219 - 41659138
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  41659219 gtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctt 41659138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 22549116 - 22549028
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| ||||||||||||| |||  |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  22549116 tgaggctgtgcaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctt 22549028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 6465056 - 6464943
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||||| ||||| ||| || ||||| | ||| |||||||| || |||||||||||||||| |||||||||||||||||||||| |||||||||| |    
T  6465056 aatcacattggaatgagaggaatcatgaggccgtgtaggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 6464957  T
Q  354 agatgcatcttctt 367  Q
    |||||||| |||||    
T  6464956 agatgcattttctt 6464943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 17103116 - 17103194
Alignment:
Q  289 caggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  17103116 caggtatgagactgcatggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctgcatcttctt 17103194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 2044058 - 2044171
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| ||||| ||||||| ||| |||||||||||||||| ||||||||||||||||| |||| |||||||||| |    
T  2044058 aatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttgatactacctatatcaaca 2044157  T
Q  354 agatgcatcttctt 367  Q
    |||||||| |||||    
T  2044158 agatgcattttctt 2044171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 10844915 - 10844996
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  10844915 gtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 10844996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 22026411 - 22026492
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  |||||||||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  22026411 gtgcaggtatgggactgcatggttgaatgaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 22026492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 27925931 - 27926012
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  |||||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  27925931 gtgcaggtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttctt 27926012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 22548670 - 22548582
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| ||||||||||||| |||  |||||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  22548670 tgaggctgtgcaggtatgtgactgcatggttgaaggaagttttataagaattgtttggtactacctatatcaacaagatgcatcttctt 22548582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 281 - 367
Target Start/End: Original strand, 25147563 - 25147649
Alignment:
Q  281 agactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||| ||||||| |||  ||||||||||||||| ||||||||||||||||||| || |||||||||| |||||||||||||||    
T  25147563 agactgtgtaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtgctacctatatcaacaagatgcatcttctt 25147649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 12827364 - 12827287
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| || ||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  12827364 aggtatgggactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctt 12827287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 287 - 367
Target Start/End: Complemental strand, 10844728 - 10844648
Alignment:
Q  287 tgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||  ||||||||||||||| ||||||||| |||||||||||| ||||||| || |||||||||||||||    
T  10844728 tgcaggtatgggactgcatggttgaaggaaggcttataagagttgtttggtactacctatattaacaagatgcatcttctt 10844648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 364
Target Start/End: Complemental strand, 27022448 - 27022374
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||||| |||||||||| || |||||||||    
T  27022448 aggtatgggactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaacatgcatctt 27022374  T

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Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 367
Target Start/End: Complemental strand, 28375189 - 28375087
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| ||||||  |||| | ||||||||||| |||  |||| |||||||||| |||||||||||||||||||||| |||| ||||| ||||||||||||    
T  28375189 aatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatctt 28375090  T
Q  365 ctt 367  Q
    |||    
T  28375089 ctt 28375087  T

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Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 8080452 - 8080375
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||  || ||||||||||||||||||| |||||||||| ||||||||| |||||    
T  8080452 aggtatgggactacatggttgaaggaaagctgataagaattgtttggtactacctatatcaacaagatgcattttctt 8080375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 22840639 - 22840562
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| ||| ||||||| ||| |||||||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  22840639 aggtatgagactacatggtcgaatgaagacttataagaattgtttggtactatctatatcaacaagatgcatcttctt 22840562  T

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Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 34308625 - 34308512
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||||||||||  |||| | || || ||||| |||   |||||||||||||| |||||||||| ||||||||||| |||||||||| |    
T  34308625 aatcacatcggaatgaaagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatcaaca 34308526  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  34308525 agatgcatcttctt 34308512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 27021976 - 27021912
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||| |||||||||||||||||||||| | |||||||| |||||||||||||||    
T  27021976 catggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttctt 27021912  T

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Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 265 - 364
Target Start/End: Original strand, 6466722 - 6466820
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| ||||||| ||||||||||| ||||||| ||  ||||||| ||||| ||||||||| |||||||||||||| |||||| ||| ||||||||||||    
T  6466722 aatgagagggattctgagactgtgcgggtatggaactgcatggttaaagga-gacttataaaaattgtttggtactacctataccaacaagatgcatctt 6466820  T

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Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 280 - 367
Target Start/End: Complemental strand, 33852378 - 33852291
Alignment:
Q  280 gagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| ||||||||||| |||   ||||||||||||| ||||||||||||||||||||||| ||||||| || |||||| ||||||||    
T  33852378 gagaccgtgcaggtatgagactgtatggttgaaggaaaacttataagaattgtttggtactacctatattaacaagatgtatcttctt 33852291  T

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Target: chr8; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 12100726 - 12100804
Alignment:
Q  289 caggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||| |||  |||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  12100726 caggtatgagactgcatggttgaaggcaagcttataagatttgtttggtactacctatatcaataagatgcatcttctt 12100804  T

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Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 25144804 - 25144885
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||   |||| ||||||| || |||||||||||||||||||||| |||||||||  |||||||||||||||    
T  25144804 gtgcaggtatgggattgcatgattgaaggcaggcttataagaattgtttggtactacctatatcagcaagatgcatcttctt 25144885  T

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Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 32292429 - 32292510
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| |||||||||  ||||||||||||||  ||||||||||||||||||||||  ||||||||| ||| |||||||||||    
T  32292429 gtgcaagtatgggactgcatggttgaaggaatgcttataagaattgtttggtactatctatatcaacaagttgcatcttctt 32292510  T

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Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 27819343 - 27819279
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||| || ||||||||||||||||||| |||||||||| || ||||||||||||    
T  27819343 catggttgaaggaaggctaataagaattgtttggtactacctatatcaacaaaatgcatcttctt 27819279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 367
Target Start/End: Complemental strand, 30335029 - 30334941
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||||| |||  || ||||||| |||||||||||| ||||||||| |||| |||||| ||| ||||| |||||||||    
T  30335029 tgagactgtgcaggtatgcgactgcaaggttgaaagaagacttataaaaattgtttgatactacctataccaacaagatacatcttctt 30334941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 287 - 367
Target Start/End: Original strand, 41913003 - 41913083
Alignment:
Q  287 tgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||  |||| ||||| |||| ||||||||||||||||||| || |||||||||| ||||||| |||||||    
T  41913003 tgcaggtatgggactgcatgtttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcgtcttctt 41913083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 357
Target Start/End: Original strand, 1297000 - 1297110
Alignment:
Q  247 gcaaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctat 346  Q
    |||||||||||||||  || ||| |||| || |||||   |||||||||| |||  ||||||||||| || ||||||||||||||||||||||| |||||    
T  1297000 gcaaccaaatcacatcaaagtgagaggggttctgagatcatgcaggtatgagactgcatggttgaagtaaaacttataagaattgtttggtactacctat 1297099  T
Q  347 atcaataagat 357  Q
    | ||| |||||    
T  1297100 accaacaagat 1297110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 22705208 - 22705282
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    |||||||||||   ||| ||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||    
T  22705208 aggtatgggactggatgattgaaggaagggttataagaattgtttggtactacctatatcaacaagatgcatctt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 3744674 - 3744751
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||  |||||||||||||||||||||||||||||||||  ||| |||||| ||| || ||||| ||||||    
T  3744674 aggtatgggactgcatggttgaaggaagacttataagaattgtttgacactacctataccaacaatatgcaccttctt 3744751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 28453370 - 28453451
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||  |||||||||| ||| |||||||||||||||||  |||| ||||||| || |||||||||||||||    
T  28453370 gtgcaggtatgagacttcatggttgaaagaaaacttataagaattgttttatactacctatattaacaagatgcatcttctt 28453451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 15568100 - 15568041
Alignment:
Q  305 tggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||||||||||||||||||| ||||||||||||   |||||||||| ||||||||||||    
T  15568100 tggttgaaggaagacttataacaattgtttggtatgacctatatcaacaagatgcatctt 15568041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 297 - 367
Target Start/End: Original strand, 3745144 - 3745214
Alignment:
Q  297 ggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| ||||||||||||||| ||||||||||| ||||| ||||| |||||| ||| || ||||||||||||    
T  3745144 ggactacatggttgaaggaaaacttataagaactgtttagtactacctataccaacaatatgcatcttctt 3745214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 15819117 - 15819048
Alignment:
Q  298 gacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||||||  |||| || |||||||||||||| | |||||||| | |||||||||||||    
T  15819117 gacaacatggttgaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttctt 15819048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 351
Target Start/End: Complemental strand, 29971511 - 29971450
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaa 351  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||||| ||||  |||||||||    
T  29971511 aggtatgagactacatggttgaaggaagatttataagaattgtttgatactatctatatcaa 29971450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 307 - 367
Target Start/End: Original strand, 25148020 - 25148080
Alignment:
Q  307 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||||||  | |||||||||| ||||||||| |||||    
T  25148020 gttgaaggaaggcttataagaattgtttggtcttacctatatcaacaagatgcatattctt 25148080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 17429553 - 17429611
Alignment:
Q  307 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttc 365  Q
    ||||||||||||||||| || ||| ||||||||| |||||||||| |||||| ||||||    
T  17429553 gttgaaggaagacttatgagtattatttggtactacctatatcaacaagatgtatcttc 17429611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 34309035 - 34308968
Alignment:
Q  304 atggttgaaggaagacttataagaattgtttggtactgcc----tatatcaataagatgcatcttctt 367  Q
    |||||||||||||| |||||||||| ||||||||||| ||    |||||||| |||||||||||||||    
T  34309035 atggttgaaggaaggcttataagaactgtttggtactacctatatatatcaacaagatgcatcttctt 34308968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 361
Target Start/End: Complemental strand, 36968491 - 36968434
Alignment:
Q  304 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcat 361  Q
    |||||||||||| ||||||||||||||| ||||| || | |||||||| |||||||||    
T  36968491 atggttgaaggatgacttataagaattgattggtgctacttatatcaacaagatgcat 36968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 21316190 - 21316142
Alignment:
Q  319 cttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| ||||||||||||||||| |||||||||| |||||||||| ||||    
T  21316190 cttaaaagaattgtttggtactacctatatcaacaagatgcatcgtctt 21316142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 367
Target Start/End: Complemental strand, 30527566 - 30527515
Alignment:
Q  316 agacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||||||||||||  | || ||||||||||| |||||||||    
T  30527566 agacttataagaattgtttggtaccacttacatcaataagatacatcttctt 30527515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 15567658 - 15567589
Alignment:
Q  298 gacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| |||||| |||||||| |||||||||||||||||  ||| | |||| ||| ||||| |||||||||    
T  15567658 gacatcatggtggaaggaaggcttataagaattgtttgacactacatataccaacaagatacatcttctt 15567589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 4e-29; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 33174958 - 33175071
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | ||| ||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| |    
T  33174958 aatcacatcggaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 33175057  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  33175058 agatgcatcttctt 33175071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 279 - 367
Target Start/End: Original strand, 1707066 - 1707154
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  1707066 tgagactgtgtaggtatgagactacatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctt 1707154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 249 - 367
Target Start/End: Original strand, 16379388 - 16379506
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| ||||| |||| ||||| ||||||   ||| | |||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||||||    
T  16379388 aaccgaatcaaattggaatgagagggatcccgaggccgtgcaggtatgggactgcatggttgaaggaagacttatacgaattgtttggtactacctatat 16379487  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  16379488 caacaagatgcatcttctt 16379506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 367
Target Start/End: Original strand, 8073903 - 8074005
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| |||||| |||||| |||||||||||||| | | | ||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  8073903 aatgagagggatcatgagattgtgcaggtatgggtctataaggttgaagggagacttataagaattgtttggtactacctataccaacaagatgcatctt 8074002  T
Q  365 ctt 367  Q
    |||    
T  8074003 ctt 8074005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 30966269 - 30966347
Alignment:
Q  289 caggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  30966269 caggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 30966347  T

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Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 8256562 - 8256639
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  8256562 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctt 8256639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 25338111 - 25338030
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  25338111 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctt 25338030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 1953187 - 1953268
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||  ||||||||||||||||| |||||||||||||||||||| ||||||||||  ||||||||||||||    
T  1953187 gtgcaggtatgagactgcatggttgaaggaagacctataagaattgtttggtactacctatatcaactagatgcatcttctt 1953268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 29804718 - 29804795
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| ||||||||||||| || ||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  29804718 aggtatgggactacatggttgaaggcaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctt 29804795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 41754321 - 41754402
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||  ||||||||||||||| ||||||||||||||||||||||  ||||||||| |||||||||||||||    
T  41754321 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcatcttctt 41754402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 249 - 364
Target Start/End: Complemental strand, 18448069 - 18447954
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||||||  |||| | ||| ||||||| ||| |||||||||||| |||||||||||||||||||||||||| | | |||    
T  18448069 aaccgaatcacatcggaatgatagggatcctgaggccgtgtaggtatgtgactacatggttgaagtaagacttataagaattgtttggtactacttgtat 18447970  T
Q  349 caataagatgcatctt 364  Q
    ||| ||||||||||||    
T  18447969 caacaagatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 292 - 367
Target Start/End: Original strand, 30966728 - 30966803
Alignment:
Q  292 gtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||  |||||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  30966728 gtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttctt 30966803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 249 - 367
Target Start/End: Original strand, 33174500 - 33174616
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||||||  |||  | ||| ||||||||||| |||  ||||||||||| |||||||||||||||||||||| |||||||    
T  33174500 aaccgaatcacatcggaatgagagggatcctgatgccgtgtaggtatgggactaca--gttgaaggaaggcttataagaattgtttggtactacctatat 33174597  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  33174598 caacaagatgcatcttctt 33174616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 18099029 - 18098911
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||| ||  |||| | ||| ||||||| ||| ||||||||||||| |  |||||||||||||||||||||| |||||||    
T  18099029 aaccgaatcacatcggaatgagaggaatcctgaggccgtgtaggtatgagactacatggttgaagggatgcttataagaattgtttggtactacctatat 18098930  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  18098929 caacaagatgcatcttctt 18098911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 364
Target Start/End: Original strand, 24818326 - 24818436
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | ||||| |||||||||  ||||||| ||||||| |||||||||||||||| ||||| |||||||||| |    
T  24818326 aatcacatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaaca 24818425  T
Q  354 agatgcatctt 364  Q
    |||||||||||    
T  24818426 agatgcatctt 24818436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 1912561 - 1912638
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| ||| ||||||||||| | ||| ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  1912561 aggtatgagactacatggttgaaagtagatttataagaattgtttggtactacctatatcaacaagatgcatcttctt 1912638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 29259766 - 29259653
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||||| || || |||||||||  ||||||||||||||| ||||| | |||||||||||||| | |||||||| |    
T  29259766 aatcacatcggaatgagagggatcctgagaccgtacaagtatgggactgcatggttgaaggaaggcttattaaaattgtttggtactacatatatcaaca 29259667  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  29259666 agatgcatcttctt 29259653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 33771037 - 33771114
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||  || |||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  33771037 aggtatgggactgcagggttgaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 33771114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 364
Target Start/End: Original strand, 83008 - 83127
Alignment:
Q  245 aggcaaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcct 344  Q
    |||||||  |||||| | ||||||| ||||||  ||||| |||||||||||| ||| ||||||||||||| |  ||||||||||| |||||||||| |||    
T  83008 aggcaactgaatcacgtcgaaatgagagggatcctgagattgtgcaggtatgagactacatggttgaaggtatgcttataagaatcgtttggtactacct 83107  T
Q  345 atatcaataagatgcatctt 364  Q
    ||| ||| |||||| |||||    
T  83108 ataccaacaagatgaatctt 83127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 265 - 367
Target Start/End: Original strand, 16378948 - 16379050
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| |||||||  ||| | ||||| ||||| |||  ||||||||||||||| |||||| |||||||||| |||| |||||||||| ||||||||||||    
T  16378948 aatgagagggattccgaggccgtgcaagtatgagactgcatggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcatctt 16379047  T
Q  365 ctt 367  Q
    |||    
T  16379048 ctt 16379050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 20502055 - 20502133
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| |||||||||  ||||||||||||||| ||||||||||||||||||||||  ||||||||| ||||||| ||||    
T  20502055 gtgcaagtatgggactgcatggttgaaggaaggcttataagaattgtttggtactttctatatcaacaagatgcttctt 20502133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 27883072 - 27882959
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||  ||||||| ||||||  |||| | ||||| ||||| |||  ||| ||||||||||  |||||||||||||||||||| |  |||||||||||    
T  27883072 aatcacaccgaaatgagagggatcctgaggccgtgcatgtatgagactgcattgttgaaggaatgcttataagaattgtttggtattatctatatcaata 27882973  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  27882972 agatgcatcttctt 27882959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 13191023 - 13191087
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| |||||||||||||||||||||||||||||| | |||| ||| |||||||||||||||    
T  13191023 catggttcaaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttctt 13191087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 30963817 - 30963753
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||| ||||||||||||||| |||| || |||||||||| |||||||||||||||    
T  30963817 catggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatcttctt 30963753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 304 - 367
Target Start/End: Complemental strand, 5399913 - 5399850
Alignment:
Q  304 atggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||| |||| || |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  5399913 atggtttaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 5399850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 16542033 - 16542095
Alignment:
Q  302 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||| |||||| |||||    
T  16542033 acatggttgaaggaagacttataataattgttttgtactacctatatcaacaagatgtatctt 16542095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 363
Target Start/End: Complemental strand, 25434191 - 25434093
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatct 363  Q
    ||||| ||||||  |||| | |||| ||||||||||  ||||||||||||||| ||||||||||||||||| |||  ||| |||||| |||||||||||    
T  25434191 aatgagagggatcctgaggccgtgctggtatgggacttcatggttgaaggaaggcttataagaattgtttgatacaacctttatcaacaagatgcatct 25434093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 11388224 - 11388300
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| ||| |||||||||||||||  |||| || |||||||||||||| |||||||||| |||||||||||||||    
T  11388224 aggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttctt 11388300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 11394571 - 11394647
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| ||| |||||||||||||||  |||| || |||||||||||||| |||||||||| |||||||||||||||    
T  11394571 aggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttctt 11394647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 30963360 - 30963299
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    |||| |||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  30963360 catgattgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatctt 30963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 38899010 - 38898945
Alignment:
Q  302 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||   |||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  38899010 acatggttgaaggagagcttataagaattgtttggtactacctatatcaacaagatgcattttctt 38898945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 305 - 357
Target Start/End: Complemental strand, 8181446 - 8181394
Alignment:
Q  305 tggttgaaggaagacttataagaattgtttggtactgcctatatcaataagat 357  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||| |||||    
T  8181446 tggttgaaggaagacttttaagaattgtttggtactacctatatcaacaagat 8181394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 15619930 - 15620011
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| ||||| |||  ||| |||||||| |  |||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  15619930 gtgcaagtatgagactgcatagttgaaggcaagcttataagaattgtttggtactacctatatcaacaagatacatcttctt 15620011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 305 - 367
Target Start/End: Complemental strand, 36924519 - 36924455
Alignment:
Q  305 tggttgaaggaagacttataagaattgtttggtactgc--ctatatcaataagatgcatcttctt 367  Q
    ||||||||||||| |||||||||||||||||||| | |   |||||||| |||||||||||||||    
T  36924519 tggttgaaggaaggcttataagaattgtttggtattacttatatatcaacaagatgcatcttctt 36924455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 15639799 - 15639847
Alignment:
Q  319 cttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||| ||||||||||||||| |||||||||| || || |||||||||    
T  15639799 cttataggaattgtttggtactacctatatcaacaacatacatcttctt 15639847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 3e-27; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 249 - 367
Target Start/End: Original strand, 3652481 - 3652599
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||||||  |||| ||||| ||||||||||| |||||||||||||||| |||||||||||||| || |||| |||||||    
T  3652481 aaccgaatcacatcggaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtctgatactacctatat 3652580  T
Q  349 caataagatgcatcttctt 367  Q
    ||| |||||||||||||||    
T  3652581 caacaagatgcatcttctt 3652599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 253 - 367
Target Start/End: Complemental strand, 13191660 - 13191546
Alignment:
Q  253 aaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaat 352  Q
    ||||||||| | ||||| ||||||  | ||||| || |||||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||||||     
T  13191660 aaatcacatcggaatgagagggatcctaagactatgtaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 13191561  T
Q  353 aagatgcatcttctt 367  Q
    |||||||||||||||    
T  13191560 aagatgcatcttctt 13191546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 253 - 367
Target Start/End: Complemental strand, 17027678 - 17027564
Alignment:
Q  253 aaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaat 352  Q
    ||||||||| | ||||| ||||||   ||| | |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||||||     
T  17027678 aaatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 17027579  T
Q  353 aagatgcatcttctt 367  Q
    ||||| |||||||||    
T  17027578 aagattcatcttctt 17027564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 367
Target Start/End: Original strand, 20850332 - 20850434
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| |||| | ||||| | |||||||||||||||  ||||||||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||    
T  20850332 aatgagagggttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttttgtactacctatatcaacaagatgcatctt 20850431  T
Q  365 ctt 367  Q
    |||    
T  20850432 ctt 20850434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 367
Target Start/End: Original strand, 21311982 - 21312084
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| |||| | ||||| ||||||||||||| |||  ||||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||||||||    
T  21311982 aatgagagggttcatgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatctt 21312081  T
Q  365 ctt 367  Q
    |||    
T  21312082 ctt 21312084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 6331022 - 6330945
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||    
T  6331022 aggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaatatgcatcttctt 6330945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 7911910 - 7911991
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||| ||||  |||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  7911910 gtgcaggtataggactgcatggttgaaggaaaacttataagaattgtttggtactacctatatcaacaagatgcatcttctt 7911991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 20896798 - 20896721
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20896798 aggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 20896721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 23776477 - 23776554
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||||||||||||||| || ||||||| |||||||||| |||||||||||||||    
T  23776477 aggtatgggactacatggttgaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcatcttctt 23776554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 279 - 367
Target Start/End: Original strand, 13492814 - 13492902
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| ||||||||||||| |||  ||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  13492814 tgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataataattgtttggtactacctatatcaacaagatgcatcttctt 13492902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 367
Target Start/End: Original strand, 20735686 - 20735808
Alignment:
Q  245 aggcaaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcct 344  Q
    ||||||||| |||||||   ||||| ||||||  |||||||||| ||||||| ||| ||||| ||| |||||| ||||||||||||||||| |||| | |    
T  20735686 aggcaaccagatcacatcataatgagagggatcttgagactgtgtaggtatgtgactacatgattgtaggaaggcttataagaattgtttgatactactt 20735785  T
Q  345 atatcaataagatgcatcttctt 367  Q
    ||||||| |||||||||||||||    
T  20735786 atatcaacaagatgcatcttctt 20735808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 23986468 - 23986350
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| ||||||   ||| | ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||    
T  23986468 aaccgaatcacatcggaatgagagggatccggaggccgtgtaggtatgggactacatggttgaaggtaggcttataagaattgtttggtactacctatat 23986369  T
Q  349 caataagatgcatcttctt 367  Q
     || |||||||||||||||    
T  23986368 gaacaagatgcatcttctt 23986350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 7912342 - 7912423
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  |||||||||||||| ||||||| ||||||||||||||| |||||||||| ||||||||| |||||    
T  7912342 gtgcaggtatgggactgcatggttgaaggaaaacttatatgaattgtttggtactacctatatcaacaagatgcattttctt 7912423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 9352062 - 9352175
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| ||||||| ||||||  |||| ||||| ||||||| ||| ||||||| ||||| |||||||||| | |||||||||||| ||||||| || |    
T  9352062 aatcacatcgaaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaagggagacttataatatttgtttggtactacctatataaaca 9352161  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  9352162 agatgcatcttctt 9352175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 16519968 - 16520081
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| ||||| ||||||| ||| ||||||| |||||||| ||||| ||| |||||||||||| |||||||||| |    
T  16519968 aatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaaggaaggcttatgagatttgtttggtactacctatatcaaca 16520067  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  16520068 agatgcatcttctt 16520081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 20126328 - 20126215
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  | || ||||| ||||||| ||| |||||||||||||||| ||||||||||| ||||| |||| |||||||||| |    
T  20126328 aatcacatcggaatgagagggatcctaaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaatggtttgatactacctatatcaaca 20126229  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  20126228 agatgcatcttctt 20126215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 254 - 357
Target Start/End: Complemental strand, 17731259 - 17731156
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | || ||||||||||||  ||||||| |||||||||||||||||||||||||||||| |||||||||| |    
T  17731259 aatcacatcggaatgagagggatcctgaggccgttcaggtatgggactgcatggttaaaggaagacttataagaattgtttggtactacctatatcaaca 17731160  T
Q  354 agat 357  Q
    ||||    
T  17731159 agat 17731156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 2681326 - 2681249
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| ||||||  |||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||||||||||    
T  2681326 aggtttgggactgcatggttgaatgaagacttataagaattgtttggtactacccatatcaacaagatgcatcttctt 2681249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 14771829 - 14771752
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| |||  |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||| |||||    
T  14771829 aggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatccatattctt 14771752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 27334193 - 27334274
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||| ||  ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  27334193 gtgcaggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttctt 27334274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 27394933 - 27395014
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||| ||  ||||||||||||||  |||||||||||||||||||||| |||||||||| |||||| ||||||||    
T  27394933 gtgcaggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttctt 27395014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 279 - 367
Target Start/End: Original strand, 11062310 - 11062398
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| ||||| |||||||  || |||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||||||||||||||    
T  11062310 tgaggctgtgtaggtatgaaactacatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatcttctt 11062398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 249 - 364
Target Start/End: Complemental strand, 31821843 - 31821728
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||| | ||||| |||||| ||||| |  || ||||||| ||| |||||||||||||||  |||||||||||| |||||||||  ||||||    
T  31821843 aaccgaatcacatcggaatgagagggatcatgaggccatgtaggtatgagactacatggttgaaggaatgcttataagaattatttggtactaactatat 31821744  T
Q  349 caataagatgcatctt 364  Q
    ||| ||||||||||||    
T  31821743 caacaagatgcatctt 31821728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 348
Target Start/End: Complemental strand, 2720678 - 2720616
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||||| |||||||    
T  2720678 gtgcaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatat 2720616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 2890953 - 2890872
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  |||||||||||||||  |||||||||||||| || ||| |||||||||| ||||||| |||||||    
T  2890953 gtgcaggtatgggactgcatggttgaaggaaggtttataagaattgttagggactacctatatcaaaaagatgcttcttctt 2890872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 15929235 - 15929312
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| ||| ||| |||||||| ||  |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  15929235 aggtatgagactacaaggttgaagaaaagcttataagaattgtttggtaatgcctatatcaataagatgcatattctt 15929312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 367
Target Start/End: Original strand, 15929620 - 15929695
Alignment:
Q  292 gtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||| |||| ||||||||||| |||| |||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  15929620 gtattggactacatggttgaatgaaggcttataagaattatttggtactacctatatcaacaaaatgcatcttctt 15929695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 20732613 - 20732691
Alignment:
Q  289 caggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||| ||| ||||||||| |||||| |||||||||||| ||||||||| ||||||| ||||| |||||| |||||    
T  20732613 caggtatgtgactacatggttgtaggaaggcttataagaattatttggtactacctatattaataatatgcatattctt 20732691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 21311515 - 21311628
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| |||| | ||||| | || || |||||||||  ||||||||||||||| |||||||||||||||||||| | |||| || || |    
T  21311515 aatcacatcggaatgagagggttcatgaggccgtacaagtatgggactgcatggttgaaggaagccttataagaattgtttggtattacctagataaaca 21311614  T
Q  354 agatgcatcttctt 367  Q
    |||| |||||||||    
T  21311615 agatccatcttctt 21311628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 340
Target Start/End: Complemental strand, 9440542 - 9440488
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtact 340  Q
    |||||||||||||||  |||||||||| |||| ||||||||||||||||||||||    
T  9440542 gtgcaggtatgggacttcatggttgaatgaaggcttataagaattgtttggtact 9440488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 32292917 - 32292995
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||||||||| |||  |||||||||| |||| |||||||||||||||||||||| |||||| ||| || || ||||||    
T  32292917 gtgcaggtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaaaatacatctt 32292995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 9440423 - 9440342
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||| ||  |||||||||| |||  ||||||||||||||| |||||| | |||||||| ||||||||| |||||    
T  9440423 gtgcaggtatggaactgcatggttgaatgaaagcttataagaattgttcggtactacttatatcaacaagatgcattttctt 9440342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 9440971 - 9440890
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| |||| || |||||||||||||||  |||||||||||| ||||||||| | | |||||| ||||||||| |||||    
T  9440971 gtgcaggcatggaactacatggttgaaggaatgcttataagaattctttggtactacttttatcaacaagatgcattttctt 9440890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 17851406 - 17851487
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| |||||||||  ||||||| || |||| |||||||||  ||||||||||| ||| |||||| |||||||||||||||    
T  17851406 gtgcaagtatgggactgcatggttaaaagaaggcttataagatatgtttggtactacctttatcaacaagatgcatcttctt 17851487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 354
Target Start/End: Original strand, 10964312 - 10964404
Alignment:
Q  261 ttgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataa 354  Q
    ||||||||| ||||||| | ||| ||| |||||||| |||   ||||| |||| |||||||| ||||||||||||||||| | |||||||||||    
T  10964312 ttgaaatgagagggatt-taagattgttcaggtatgagactgtatggtagaagaaagacttacaagaattgtttggtactacatatatcaataa 10964404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 13492397 - 13492445
Alignment:
Q  319 cttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||||| || | |||||||||| |||||||||||||||    
T  13492397 cttataagaattgtttgatattacctatatcaacaagatgcatcttctt 13492445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 33775118 - 33775035
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata--agatgcatcttctt 367  Q
    ||||| ||||| |||  |||||||||||||||  ||||||||||||| |||| || |||||||||| |  ||||||||||||||    
T  33775118 gtgcaagtatgtgaccgcatggttgaaggaaggattataagaattgtctggtgctacctatatcaacaagagatgcatcttctt 33775035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 367
Target Start/End: Original strand, 1991587 - 1991666
Alignment:
Q  288 gcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||| ||| ||||||||| | |||| |||| ||||||||||||||| | | ||| | || |||||||||||||||    
T  1991587 gcaggtatgagactacatggttggaagaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttctt 1991666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 340
Target Start/End: Complemental strand, 30729953 - 30729899
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtact 340  Q
    ||||| ||||| |||| ||||||||||||| |||| |||| ||||||||||||||    
T  30729953 gtgcaagtatgagacagcatggttgaaggaggactcataaaaattgtttggtact 30729899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 9441082 - 9441135
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtac 339  Q
    |||||| |||| ||| ||||| |||||||||  |||||||||||||||||||||    
T  9441082 gtgcagatatgtgactacatgattgaaggaaagcttataagaattgtttggtac 9441135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 364
Target Start/End: Original strand, 17205388 - 17205449
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||| || ||| ||||| ||||||    
T  17205388 catgattgaatgaagaattataagaattgtttggtactacctttaccaacaagattcatctt 17205449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 17850950 - 17851031
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| |||||||||  ||||||| || |||  || ||||||  ||||||||||| ||| |||||| |||||||||||||||    
T  17850950 gtgcaagtatgggactgcatggttaaaagaatgctgataagatatgtttggtactacctttatcaacaagatgcatcttctt 17851031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 28065919 - 28065874
Alignment:
Q  319 cttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||||||||||||||||||||  || |||||| ||||||||||||    
T  28065919 cttataagaattgtttggtactatctctatcaacaagatgcatctt 28065874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 2742 - 2855
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| ||||||| ||||||  |||| | ||| ||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |    
T  2742 aatcacatcgaaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaaca 2841  T
Q  354 agatgcatcttctt 367  Q
    |||||||| |||||    
T  2842 agatgcatattctt 2855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 249 - 366
Target Start/End: Original strand, 23668 - 23785
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    |||| |||||||  ||||||| |||| |  |||| | |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||    
T  23668 aaccgaatcacaccgaaatgagagggttcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatat 23767  T
Q  349 caataagatgcatcttct 366  Q
    ||| ||||||||||||||    
T  23768 caacaagatgcatcttct 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 27187476 - 27187363
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||||| ||||| ||||||  |||| ||||||| |||||||||  ||||||| || |||| |||||||||||||||||||||| ||||||||| ||    
T  27187476 aatcacattggaatgagagggatcctgaggctgtgcatgtatgggactgcatggttaaatgaaggcttataagaattgtttggtactacctatatcacta 27187377  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  27187376 agatgcatcttctt 27187363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 28561778 - 28561859
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  28561778 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 28561859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 31284390 - 31284309
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  31284390 gtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 31284309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 39640973 - 39641050
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  39640973 aggtatgagactacatggttgaaggaagacttataagagttgtttggtactacctatatcaataagatgcatcttctt 39641050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 25230856 - 25230738
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    ||||||||||||||| ||||| ||||||  |||| |  || ||||||| ||| ||||||||||||||||  ||||||||||||||||||||| |||||||    
T  25230856 aaccaaatcacattggaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatat 25230757  T
Q  349 caataagatgcatcttctt 367  Q
    ||| ||||||||| |||||    
T  25230756 caacaagatgcattttctt 25230738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 25238443 - 25238325
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    ||||||||||||||| ||||| ||||||  |||| |  || ||||||| ||| ||||||||||||||||  ||||||||||||||||||||| |||||||    
T  25238443 aaccaaatcacattggaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctatat 25238344  T
Q  349 caataagatgcatcttctt 367  Q
    ||| ||||||||| |||||    
T  25238343 caacaagatgcattttctt 25238325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 11180144 - 11180067
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  11180144 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctt 11180067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 20885227 - 20885150
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||    
T  20885227 aggtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttctt 20885150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 30529687 - 30529800
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| ||||| ||||||| ||| |||||||||||| ||| |||||||||||| ||||||||| |||||||||| |    
T  30529687 aatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaagtaaggcttataagaattttttggtactacctatatcaaca 30529786  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  30529787 agatgcatcttctt 30529800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 32797081 - 32796968
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| ||||| | ||||||  ||||||  || |||||||  || |||||||||||| |||||||||||||||||||||||||| |||||||||| |    
T  32797081 aatcacatcgaaataagagggatcctgagaccatgtaggtatgaaactacatggttgaagcaagacttataagaattgtttggtactacctatatcaaca 32796982  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  32796981 agatgcatcttctt 32796968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 25230399 - 25230281
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    ||||||||||||| | || || ||||||  ||||   ||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||| |||||||    
T  25230399 aaccaaatcacatcggaaggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatat 25230300  T
Q  349 caataagatgcatcttctt 367  Q
    ||| ||||| |||||||||    
T  25230299 caacaagatacatcttctt 25230281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 249 - 367
Target Start/End: Complemental strand, 25237986 - 25237868
Alignment:
Q  249 aaccaaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatat 348  Q
    ||||||||||||| | || || ||||||  ||||   ||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||| |||||||    
T  25237986 aaccaaatcacatcggaaggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctatat 25237887  T
Q  349 caataagatgcatcttctt 367  Q
    ||| ||||| |||||||||    
T  25237886 caacaagatacatcttctt 25237868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 13150209 - 13150132
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||| ||| |||||| |||||||||||||||    
T  13150209 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttctt 13150132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 25248111 - 25248224
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||| | || | |||||||||||||||  ||||||| ||||||   ||||||||||||||||||||| |||||||||| |    
T  25248111 aatcacatcggaatgagagggattctaaggccgtgcaggtatgggactgcatggttaaaggaatgtttataagaattgtttggtactacctatatcaaca 25248210  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  25248211 agatgcatcttctt 25248224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 32227331 - 32227254
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||| ||||||| || |||||||||||||||    
T  32227331 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttctt 32227254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 32227536 - 32227613
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||| ||||||| || |||||||||||||||    
T  32227536 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttctt 32227613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 32386848 - 32386767
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||   |||||||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||    
T  32386848 gtgcaggtatgggactgtatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttctt 32386767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 306 - 367
Target Start/End: Complemental strand, 4067454 - 4067393
Alignment:
Q  306 ggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  4067454 ggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctt 4067393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 7493913 - 7493994
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||  ||||||||||||||| |||||||||||| ||||||||| | |||||||| |||||||||||||||    
T  7493913 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatgcatcttctt 7493994  T

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Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 13150652 - 13150587
Alignment:
Q  302 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  13150652 acatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctt 13150587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 14813985 - 14814062
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| |||  ||||||| ||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  14813985 aggtatgagactgcatggttaaaggaaggcttataataattgtttggtactacctatatcaataagatgcatcttctt 14814062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 16811381 - 16811494
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | ||| |||| ||||||  ||||||||||||||| ||||||||||||||| |||||| ||||| |||| |    
T  16811381 aatcacatcggaatgagagggatcctgaggccgtgtaggtttgggactccatggttgaaggaaggcttataagaattgttgggtactacctatttcaaca 16811480  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  16811481 agatgcatcttctt 16811494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 302 - 367
Target Start/End: Complemental strand, 25238782 - 25238717
Alignment:
Q  302 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||||||||||||||||||||||||||  || |||||| |||||||||||||||    
T  25238782 acatggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttctt 25238717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 25239187 - 25239110
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| | |||||||||||||  |||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  25239187 aggtatgggactatatggttgaaggaacgcttataagaattttttggtactacctatatcaacaagatgcatcttctt 25239110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 39653196 - 39653277
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||||||||||||||  ||||||||||||||| | |||| |||||||||| |||||||||||||||    
T  39653196 gtgcaggtatgggactgcatggttgaaggaaagcttataagaattgttggatactacctatatcaacaagatgcatcttctt 39653277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 29224373 - 29224437
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||||||||||||||||||||||||| ||||||  || |||||||||||||||    
T  29224373 catggttgaaggaagacttataagaattgtttggtactacctatactaacaagatgcatcttctt 29224437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 292 - 367
Target Start/End: Original strand, 50347784 - 50347859
Alignment:
Q  292 gtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||| ||| || ||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  50347784 gtatgagactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctt 50347859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 41472336 - 41472413
Alignment:
Q  289 caggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||| |||  ||||||||||||||| |||||||||||||||||||||| | |||||||| |||||||||||||||    
T  41472336 caggtatgagactgcatggttgaaggaag-cttataagaattgtttggtactacatatatcaacaagatgcatcttctt 41472413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 7477223 - 7477304
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||  ||||||||||||||| |||||||||||| ||||||||| | |||||||| ||||| |||||||||    
T  7477223 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttctt 7477304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 8067312 - 8067390
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||||||||||||   ||||||||||||  | |||||||||||||||| ||||| |||||||||| ||||||||||||    
T  8067312 gtgcaggtatgggattgcatggttgaaggccggcttataagaattgtttagtactacctatatcaacaagatgcatctt 8067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 25803114 - 25803037
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||  ||||||||||| ||||||| |||||||||||||||||| ||||||  || |||||| ||||||||    
T  25803114 aggtatgggactgcatggttgaagtaagacttgtaagaattgtttggtactacctataaaaacaagatgtatcttctt 25803037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 357
Target Start/End: Original strand, 41473997 - 41474100
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| ||||||| ||||||  ||||   || |||||||| |||   |||||| ||||||||||||||||||||||||| |||| |||||||||| |    
T  41473997 aatcacatcgaaatgagagggatcttgaggtcgttcaggtatgtgactggatggttaaaggaagacttataagaattgtttgatacttcctatatcaaca 41474096  T
Q  354 agat 357  Q
    ||||    
T  41474097 agat 41474100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 265 - 367
Target Start/End: Original strand, 37045046 - 37045148
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| ||||||  |||| | ||| |||| |||||| |||||  ||||||||  |||||||||||||||||||| | |||||||||| ||| ||||||||    
T  37045046 aatgagagggatcctgaggccgtgtaggtgtgggactacatgaatgaaggaatgcttataagaattgtttggtaatacctatatcaacaaggtgcatctt 37045145  T
Q  365 ctt 367  Q
    |||    
T  37045146 ctt 37045148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 367
Target Start/End: Original strand, 2911127 - 2911208
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||| ||||||||||| |||   |||||| ||||||||| || | |||||||||| ||||||||| |||||    
T  2911127 gtgcaggtatgggaccacatggttgaaagaatggttataaaaattgtttgatattacctatatcaacaagatgcatattctt 2911208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 14820211 - 14820264
Alignment:
Q  311 aaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||||| |||||||||||||||||||||| | |||||||| ||||||||||||    
T  14820211 aaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatctt 14820264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 16810925 - 16811038
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | ||| || ||||||||  ||||||||| ||||| |||||||||||||||  |||||  ||||||| | |    
T  16810925 aatcacatcggaatgagagggatcttgaggccgtgtagatatgggactgcatggttgatggaaggcttataagaattgttgcgtactaactatatctaca 16811024  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  16811025 agatgcatcttctt 16811038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 25802658 - 25802581
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||| |||  ||||||| | ||||| || |||||||| |||||||||| |||||||||| |||||||||||||||    
T  25802658 aggtatgagactgcatggttaacggaaggctgataagaatggtttggtactacctatatcaacaagatgcatcttctt 25802581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 367
Target Start/End: Complemental strand, 31104102 - 31103993
Alignment:
Q  258 acattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagat 357  Q
    |||||||||||| ||||||  | ||  ||| |||||||| ||   ||||||| ||||||||||||||||||||||||| ||||  ||||| |||  ||||    
T  31104102 acattgaaatgatagggatcttaaggttgtacaggtatgagattgcatggttcaaggaagacttataagaattgtttgatactatctataccaactagat 31104003  T
Q  358 gcatcttctt 367  Q
    |||| |||||    
T  31104002 gcattttctt 31103993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 367
Target Start/End: Complemental strand, 26310086 - 26310022
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||| || ||||||||||| |||| |||| | |||| ||| |||||||||||||||    
T  26310086 catggttgaaggacgatttataagaattttttgttactacatataccaaaaagatgcatcttctt 26310022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 335
Target Start/End: Complemental strand, 47518416 - 47518384
Alignment:
Q  303 catggttgaaggaagacttataagaattgtttg 335  Q
    |||||||||||||| ||||||||||||||||||    
T  47518416 catggttgaaggaaaacttataagaattgtttg 47518384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 367
Target Start/End: Complemental strand, 2186 - 2084
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    |||||||||| |  |||| | ||||||||||| |||  ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||    
T  2186 aatgaaagggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 2087  T
Q  365 ctt 367  Q
    |||    
T  2086 ctt 2084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 253 - 367
Target Start/End: Original strand, 18965 - 19079
Alignment:
Q  253 aaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaat 352  Q
    ||||||||| | ||||| ||||||   ||| | |||||||||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||||||     
T  18965 aaatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 19064  T
Q  353 aagatgcatcttctt 367  Q
    ||||| |||||||||    
T  19065 aagattcatcttctt 19079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 107609 - 107496
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||| |||| | || ||||||||||||  ||||||||||||||| ||||||||||||||||| |||| || ||||||| |    
T  107609 aatcacatcggaatgagagggattctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttgatactaccaatatcaaca 107510  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  107509 agatgcatcttctt 107496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 254 - 367
Target Start/End: Complemental strand, 142420 - 142307
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | |||||||||||||||  ||||||||||||||   ||||||||||||||||||||| |||||||||| |    
T  142420 aatcacatcggaatgagagggatcctgaggccgtgcaggtatgggacttcatggttgaaggaatgtttataagaattgtttggtactacctatatcaaca 142321  T
Q  354 agatgcatcttctt 367  Q
    ||||||||||||||    
T  142320 agatgcatcttctt 142307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 245122 - 245199
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  245122 aggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 245199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 367
Target Start/End: Original strand, 245526 - 245628
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||||||||||  |||| | ||| |||||||||||  |||||||||||| |  |||||||||||||||||||||| |||||||||| ||||||||||||    
T  245526 aatgaaagggatcttgagtccgtgtaggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatctt 245625  T
Q  365 ctt 367  Q
    |||    
T  245626 ctt 245628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 367
Target Start/End: Original strand, 1253 - 1333
Alignment:
Q  287 tgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||  ||||||||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||    
T  1253 tgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatataaacaagatgcatcttctt 1333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 364
Target Start/End: Complemental strand, 18280 - 18170
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | ||| ||||||| ||| |||| ||||||||||||||||||||||||||||| |||| |||||||||| |    
T  18280 aatcacatcggaatgagagggatcctgaggccgtgtaggtatgtgactacatagttgaaggaagacttataagaattgtttgatactacctatatcaaca 18181  T
Q  354 agatgcatctt 364  Q
    |||||||||||    
T  18180 agatgcatctt 18170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 265 - 367
Target Start/End: Complemental strand, 17733 - 17631
Alignment:
Q  265 aatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| ||||||  |||| | ||| ||||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||||| | |||| |||||    
T  17733 aatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaggatgtatctt 17634  T
Q  365 ctt 367  Q
    |||    
T  17633 ctt 17631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 367
Target Start/End: Complemental strand, 162789 - 162711
Alignment:
Q  289 caggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||| |||  |||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||    
T  162789 caggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaagatgcatcttctt 162711  T

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Target: scaffold0022; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 281 - 364
Target Start/End: Complemental strand, 69934 - 69851
Alignment:
Q  281 agactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatctt 364  Q
    ||||| |||||||||| |||  ||| ||||||||||  ||||||| |||||||||||||| |||||||||| | ||||||||||    
T  69934 agactatgcaggtatgagactgcatcgttgaaggaatgcttataataattgtttggtactacctatatcaacatgatgcatctt 69851  T

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Target: scaffold0002 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 154793 - 154870
Alignment:
Q  290 aggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||| ||| |||||| |||||||||||||||    
T  154793 aggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttctt 154870  T

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Target: scaffold0333 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 287 - 367
Target Start/End: Original strand, 4594 - 4674
Alignment:
Q  287 tgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||  |||||||||||||||  ||| ||||||||||||||||| |||||||||| |||||||||||||||    
T  4594 tgcaggtatgggactgcatggttgaaggaaggtttagaagaattgtttggtactacctatatcaacaagatgcatcttctt 4674  T

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Target: scaffold0333; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 367
Target Start/End: Original strand, 5049 - 5134
Alignment:
Q  287 tgcaggtatgggacaacatggttgaaggaagacttataaga-----attgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||||||  |||||||||||||||  ||| ||||     ||||||||||||| ||||||| || |||||||||||||||    
T  5049 tgcaggtatgggactgcatggttgaaggaaggtttaaaagagaagaattgtttggtactacctatattaacaagatgcatcttctt 5134  T

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Target: scaffold0024 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 253 - 367
Target Start/End: Original strand, 105719 - 105833
Alignment:
Q  253 aaatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaat 352  Q
    ||||||||| | ||||| ||||||  |||| | || ||||||||| ||  || |||||||||||| |||||||||||||||||||||| ||||||||||     
T  105719 aaatcacatcggaatgagagggatcctgaggccgtacaggtatggaactgcagggttgaaggaaggcttataagaattgtttggtactacctatatcaac 105818  T
Q  353 aagatgcatcttctt 367  Q
    || ||||||||||||    
T  105819 aaaatgcatcttctt 105833  T

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Target: scaffold0018 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 364
Target Start/End: Original strand, 10300 - 10410
Alignment:
Q  254 aatcacattgaaatgaaagggattatgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaata 353  Q
    |||||||| | ||||| ||||||  |||| | ||||| |||||||||  ||||||| ||||||| |||||||||||||||| ||||| |||||||||| |    
T  10300 aatcacatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaaca 10399  T
Q  354 agatgcatctt 364  Q
    |||||||||||    
T  10400 agatgcatctt 10410  T

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Target: scaffold0664 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 4096 - 4015
Alignment:
Q  286 gtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||  ||| ||||||||||  |||||||||||||||||||||| ||| |||||| |||||||||||||||    
T  4096 gtgcaggtatgggactgcattgttgaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatcttctt 4015  T

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Target: scaffold0557 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 302 - 367
Target Start/End: Original strand, 2153 - 2218
Alignment:
Q  302 acatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||    
T  2153 acatggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttctt 2218  T

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Target: scaffold0101 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 365
Target Start/End: Original strand, 45411 - 45497
Alignment:
Q  279 tgagactgtgcaggtatgggacaacatggttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttc 365  Q
    |||||| |||||  |||| ||| |||| ||||||||||||||||| |||||| ||||||||| |||||||||| |||||| ||||||    
T  45411 tgagaccgtgcatatatgtgactacattgttgaaggaagacttatgagaattatttggtactacctatatcaacaagatgtatcttc 45497  T

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Target: scaffold0391 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 307 - 367
Target Start/End: Original strand, 14794 - 14854
Alignment:
Q  307 gttgaaggaagacttataagaattgtttggtactgcctatatcaataagatgcatcttctt 367  Q
    ||||||||||  |||||||||||||||||||| | ||||||||||||||||||||| ||||    
T  14794 gttgaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatcgtctt 14854  T

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