View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6605_low_7 (Length: 202)

Name: NF6605_low_7
Description: NF6605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6605_low_7
NF6605_low_7
[»] chr8 (43 HSPs)
chr8 (1-128)||(8609813-8609940)
chr8 (1-120)||(13282477-13282596)
chr8 (1-119)||(13108362-13108480)
chr8 (1-118)||(5036446-5036563)
chr8 (3-119)||(13486127-13486243)
chr8 (2-119)||(22272334-22272453)
chr8 (1-116)||(26242340-26242455)
chr8 (1-116)||(41825670-41825785)
chr8 (2-119)||(38547228-38547345)
chr8 (30-119)||(42943426-42943515)
chr8 (1-116)||(42941777-42941892)
chr8 (1-119)||(41042610-41042728)
chr8 (13-119)||(27691154-27691260)
chr8 (30-119)||(5038062-5038150)
chr8 (1-77)||(9673191-9673267)
chr8 (2-121)||(7745139-7745258)
chr8 (13-119)||(33708842-33708947)
chr8 (38-119)||(34681074-34681155)
chr8 (30-121)||(22273891-22273982)
chr8 (13-119)||(26238726-26238832)
chr8 (30-119)||(13106804-13106893)
chr8 (30-119)||(29237151-29237240)
chr8 (30-119)||(35509214-35509303)
chr8 (38-119)||(43262145-43262226)
chr8 (30-118)||(33707207-33707295)
chr8 (1-120)||(601675-601794)
chr8 (30-119)||(27692837-27692926)
chr8 (30-119)||(33762713-33762802)
chr8 (30-119)||(35510819-35510908)
chr8 (30-119)||(38548831-38548920)
chr8 (30-121)||(29239187-29239278)
chr8 (38-121)||(41823888-41823971)
chr8 (30-119)||(8608237-8608327)
chr8 (30-119)||(33761069-33761158)
chr8 (30-120)||(13484544-13484634)
chr8 (4-66)||(40339709-40339771)
chr8 (30-76)||(9672020-9672066)
chr8 (30-116)||(13283995-13284081)
chr8 (1-119)||(41040720-41040838)
chr8 (30-119)||(15308261-15308350)
chr8 (30-119)||(15488630-15488719)
chr8 (1-82)||(37526029-37526110)
chr8 (62-118)||(9795535-9795591)
[»] chr7 (45 HSPs)
chr7 (1-116)||(34776921-34777036)
chr7 (1-119)||(6602335-6602453)
chr7 (1-121)||(39859235-39859355)
chr7 (4-116)||(24228418-24228530)
chr7 (1-120)||(37115532-37115651)
chr7 (1-119)||(30940431-30940549)
chr7 (30-120)||(37113940-37114030)
chr7 (2-119)||(45359336-45359453)
chr7 (7-119)||(47386221-47386333)
chr7 (13-119)||(27666083-27666189)
chr7 (1-119)||(38474149-38474267)
chr7 (30-116)||(39857648-39857734)
chr7 (14-119)||(56330-56435)
chr7 (30-119)||(13169683-13169772)
chr7 (30-119)||(23904583-23904672)
chr7 (2-119)||(29996521-29996638)
chr7 (30-121)||(34774996-34775087)
chr7 (30-116)||(6605397-6605483)
chr7 (30-119)||(35403619-35403708)
chr7 (1-91)||(13168148-13168241)
chr7 (1-116)||(37796187-37796302)
chr7 (30-120)||(35401968-35402058)
chr7 (30-116)||(48227941-48228027)
chr7 (30-118)||(24226582-24226670)
chr7 (29-110)||(13039641-13039722)
chr7 (1-82)||(33038803-33038884)
chr7 (30-115)||(35691431-35691516)
chr7 (30-121)||(46437105-46437196)
chr7 (30-121)||(47384292-47384383)
chr7 (30-119)||(22155847-22155936)
chr7 (30-119)||(22211762-22211851)
chr7 (2-76)||(35693377-35693453)
chr7 (29-116)||(37791657-37791744)
chr7 (13-119)||(20478042-20478148)
chr7 (1-119)||(20479690-20479808)
chr7 (30-119)||(78014-78103)
chr7 (1-82)||(2167516-2167597)
chr7 (1-76)||(35344296-35344371)
chr7 (7-63)||(48852359-48852415)
chr7 (1-116)||(13018036-13018153)
chr7 (30-116)||(27664433-27664519)
chr7 (13-119)||(38549547-38549653)
chr7 (33-119)||(45361279-45361365)
chr7 (58-119)||(23906295-23906356)
chr7 (9-69)||(43009334-43009394)
[»] chr5 (32 HSPs)
chr5 (1-128)||(17574309-17574436)
chr5 (1-119)||(36057619-36057737)
chr5 (1-120)||(2179786-2179905)
chr5 (1-119)||(7267843-7267961)
chr5 (30-119)||(30463900-30463989)
chr5 (1-121)||(34327633-34327753)
chr5 (1-119)||(30468286-30468404)
chr5 (2-119)||(8539675-8539792)
chr5 (30-127)||(12738736-12738833)
chr5 (30-127)||(12801559-12801656)
chr5 (30-119)||(8541271-8541360)
chr5 (1-116)||(18625014-18625129)
chr5 (30-120)||(2852885-2852975)
chr5 (13-119)||(24541230-24541336)
chr5 (30-119)||(7269446-7269535)
chr5 (28-109)||(43492131-43492212)
chr5 (1-120)||(2854333-2854451)
chr5 (30-121)||(34328827-34328918)
chr5 (30-121)||(21842992-21843083)
chr5 (30-116)||(28822090-28822176)
chr5 (30-119)||(28813765-28813856)
chr5 (13-116)||(40780553-40780656)
chr5 (13-120)||(29621799-29621906)
chr5 (1-119)||(40782182-40782300)
chr5 (13-119)||(42473625-42473731)
chr5 (1-69)||(35395383-35395451)
chr5 (1-119)||(29620138-29620256)
chr5 (4-82)||(38178102-38178180)
chr5 (4-82)||(38205326-38205404)
chr5 (7-76)||(38596911-38596980)
chr5 (1-69)||(18728608-18728676)
chr5 (1-69)||(32087564-32087632)
[»] chr3 (58 HSPs)
chr3 (1-120)||(53190785-53190904)
chr3 (1-119)||(54898437-54898555)
chr3 (1-119)||(2226178-2226296)
chr3 (3-121)||(17515308-17515426)
chr3 (1-119)||(21348723-21348841)
chr3 (1-119)||(27899107-27899225)
chr3 (1-119)||(30599944-30600062)
chr3 (1-91)||(35905738-35905828)
chr3 (1-119)||(51684610-51684728)
chr3 (1-121)||(46112485-46112605)
chr3 (2-117)||(43765139-43765254)
chr3 (1-119)||(41977750-41977868)
chr3 (1-119)||(23293196-23293314)
chr3 (30-128)||(3150243-3150341)
chr3 (13-119)||(3152256-3152362)
chr3 (30-120)||(23291569-23291659)
chr3 (1-121)||(611193-611313)
chr3 (30-118)||(2378983-2379071)
chr3 (1-116)||(42279510-42279625)
chr3 (1-119)||(30598337-30598455)
chr3 (30-119)||(44267981-44268070)
chr3 (1-116)||(2377032-2377147)
chr3 (30-121)||(38193510-38193601)
chr3 (1-119)||(44794208-44794325)
chr3 (30-120)||(46310436-46310526)
chr3 (30-119)||(38191895-38191984)
chr3 (30-119)||(41979352-41979441)
chr3 (4-89)||(46197750-46197835)
chr3 (30-119)||(46308807-46308896)
chr3 (30-119)||(53094273-53094362)
chr3 (30-119)||(53187742-53187831)
chr3 (1-113)||(2660218-2660330)
chr3 (30-116)||(42282473-42282559)
chr3 (30-119)||(27897151-27897239)
chr3 (30-119)||(44795890-44795979)
chr3 (30-119)||(46609149-46609238)
chr3 (30-119)||(46611303-46611392)
chr3 (38-119)||(51686402-51686483)
chr3 (30-119)||(54900074-54900163)
chr3 (30-116)||(54412547-54412633)
chr3 (30-119)||(35903825-35903914)
chr3 (38-119)||(48829356-48829437)
chr3 (30-119)||(53092623-53092712)
chr3 (58-119)||(7884927-7884988)
chr3 (1-41)||(7884899-7884939)
chr3 (13-69)||(19987632-19987688)
chr3 (1-65)||(48830832-48830896)
chr3 (30-109)||(17516973-17517052)
chr3 (1-119)||(28626411-28626529)
chr3 (30-76)||(43767047-43767093)
chr3 (3-76)||(23774195-23774268)
chr3 (31-116)||(35572525-35572610)
chr3 (1-82)||(48633914-48633995)
chr3 (30-114)||(2661908-2661992)
chr3 (1-109)||(2977335-2977443)
chr3 (1-69)||(23888778-23888846)
chr3 (30-82)||(33111878-33111930)
chr3 (1-45)||(44276222-44276266)
[»] chr2 (35 HSPs)
chr2 (1-119)||(16763076-16763194)
chr2 (1-119)||(44709771-44709889)
chr2 (1-119)||(39664774-39664892)
chr2 (1-119)||(14389110-14389228)
chr2 (1-121)||(17696204-17696324)
chr2 (1-119)||(39455169-39455287)
chr2 (1-119)||(40560223-40560341)
chr2 (1-121)||(19908272-19908393)
chr2 (3-119)||(2766934-2767050)
chr2 (30-119)||(16376736-16376825)
chr2 (1-119)||(6797507-6797625)
chr2 (30-128)||(39663145-39663243)
chr2 (2-115)||(42519232-42519346)
chr2 (37-116)||(19906685-19906764)
chr2 (1-83)||(16377223-16377305)
chr2 (30-119)||(34400314-34400403)
chr2 (30-119)||(39456780-39456869)
chr2 (13-121)||(19581412-19581520)
chr2 (30-126)||(14387342-14387438)
chr2 (30-119)||(16764611-16764700)
chr2 (29-116)||(31475079-31475166)
chr2 (29-116)||(37646477-37646564)
chr2 (30-116)||(6799408-6799494)
chr2 (1-119)||(24205598-24205716)
chr2 (13-119)||(24208080-24208186)
chr2 (1-119)||(40561849-40561967)
chr2 (30-119)||(6783364-6783453)
chr2 (1-82)||(41706576-41706657)
chr2 (4-76)||(37417316-37417388)
chr2 (13-119)||(6786019-6786125)
chr2 (12-82)||(15432365-15432435)
chr2 (13-119)||(37020508-37020614)
chr2 (1-119)||(37022156-37022274)
chr2 (2-82)||(25619697-25619777)
chr2 (1-69)||(29909666-29909734)
[»] chr1 (43 HSPs)
chr1 (1-119)||(25278374-25278492)
chr1 (9-119)||(27087283-27087393)
chr1 (1-119)||(37344342-37344460)
chr1 (1-120)||(2869578-2869697)
chr1 (1-119)||(4855972-4856090)
chr1 (6-119)||(31238506-31238619)
chr1 (1-121)||(34778144-34778264)
chr1 (20-116)||(52643640-52643736)
chr1 (1-119)||(6818684-6818802)
chr1 (1-119)||(51896158-51896276)
chr1 (1-121)||(50556103-50556223)
chr1 (17-119)||(3013498-3013600)
chr1 (1-119)||(46583562-46583680)
chr1 (30-119)||(31236819-31236908)
chr1 (30-116)||(3011858-3011944)
chr1 (30-118)||(50554164-50554252)
chr1 (1-76)||(15104484-15104559)
chr1 (1-116)||(33602650-33602765)
chr1 (17-119)||(25278975-25279077)
chr1 (30-119)||(26223587-26223676)
chr1 (30-120)||(2871076-2871166)
chr1 (30-116)||(51894570-51894656)
chr1 (30-119)||(25276742-25276831)
chr1 (30-119)||(37345962-37346051)
chr1 (51-118)||(6816866-6816933)
chr1 (30-129)||(46582000-46582099)
chr1 (13-120)||(47013100-47013207)
chr1 (38-120)||(52641887-52641969)
chr1 (32-121)||(8167940-8168029)
chr1 (30-119)||(34776569-34776658)
chr1 (38-119)||(37088144-37088225)
chr1 (39-119)||(25278854-25278934)
chr1 (1-119)||(9120039-9120157)
chr1 (13-127)||(9121686-9121800)
chr1 (30-119)||(4854410-4854499)
chr1 (30-119)||(8169568-8169657)
chr1 (30-119)||(27089279-27089368)
chr1 (59-119)||(45044949-45045009)
chr1 (1-120)||(1444152-1444271)
chr1 (57-120)||(33599186-33599249)
chr1 (1-72)||(42134529-42134600)
chr1 (50-108)||(33599229-33599287)
chr1 (30-119)||(47011456-47011545)
[»] chr6 (27 HSPs)
chr6 (1-119)||(32439097-32439215)
chr6 (1-119)||(32516877-32516995)
chr6 (1-118)||(20523367-20523484)
chr6 (1-116)||(7372964-7373079)
chr6 (1-119)||(13613588-13613706)
chr6 (1-118)||(11355223-11355340)
chr6 (1-66)||(9398713-9398778)
chr6 (4-119)||(6899485-6899600)
chr6 (1-115)||(10568403-10568517)
chr6 (30-120)||(11357194-11357284)
chr6 (30-120)||(32518497-32518587)
chr6 (30-119)||(9400035-9400124)
chr6 (30-119)||(20525334-20525423)
chr6 (13-121)||(10569902-10570010)
chr6 (13-120)||(6902881-6902987)
chr6 (13-119)||(32455909-32456015)
chr6 (30-119)||(7371175-7371264)
chr6 (40-119)||(7051255-7051334)
chr6 (30-120)||(18645104-18645193)
chr6 (50-119)||(13610690-13610759)
chr6 (1-41)||(7049835-7049875)
chr6 (13-87)||(3456780-3456854)
chr6 (1-119)||(3480628-3480746)
chr6 (1-63)||(14338481-14338543)
chr6 (1-119)||(32454248-32454366)
chr6 (56-121)||(8605351-8605416)
chr6 (51-119)||(32437140-32437208)
[»] chr4 (34 HSPs)
chr4 (1-118)||(49523125-49523242)
chr4 (1-120)||(51011925-51012044)
chr4 (1-119)||(41781539-41781657)
chr4 (1-116)||(41761752-41761867)
chr4 (4-119)||(48813787-48813902)
chr4 (30-119)||(49524733-49524822)
chr4 (13-119)||(43519424-43519530)
chr4 (1-119)||(35404451-35404569)
chr4 (30-119)||(35401749-35401838)
chr4 (30-109)||(39345574-39345653)
chr4 (38-121)||(48645253-48645336)
chr4 (30-119)||(319273-319362)
chr4 (30-119)||(4173740-4173829)
chr4 (3-116)||(11601674-11601786)
chr4 (30-119)||(33266010-33266099)
chr4 (30-119)||(43507167-43507256)
chr4 (30-119)||(43508653-43508742)
chr4 (1-116)||(2693259-2693373)
chr4 (30-119)||(20493827-20493916)
chr4 (30-119)||(33264382-33264471)
chr4 (30-119)||(51013886-51013975)
chr4 (1-65)||(42980689-42980753)
chr4 (1-77)||(48646753-48646829)
chr4 (33-119)||(320903-320989)
chr4 (30-120)||(4169685-4169775)
chr4 (29-118)||(20819986-20820075)
chr4 (7-91)||(52868161-52868245)
chr4 (1-82)||(44794766-44794847)
chr4 (1-76)||(44558499-44558574)
chr4 (30-115)||(11254123-11254208)
chr4 (1-82)||(35996100-35996181)
chr4 (30-87)||(42982452-42982509)
chr4 (1-82)||(47941848-47941929)
chr4 (30-114)||(43521109-43521193)
[»] scaffold1454 (1 HSPs)
scaffold1454 (1-116)||(1266-1381)
[»] scaffold0564 (1 HSPs)
scaffold0564 (8-117)||(8264-8371)
[»] scaffold0058 (3 HSPs)
scaffold0058 (1-119)||(3294-3412)
scaffold0058 (1-119)||(4466-4584)
scaffold0058 (30-119)||(14343-14432)
[»] scaffold0345 (1 HSPs)
scaffold0345 (30-120)||(1555-1645)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-119)||(54229-54347)
[»] scaffold0002 (1 HSPs)
scaffold0002 (43-121)||(436263-436341)


Alignment Details
Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 8609813 - 8609940
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||| || |||||    
T  8609813 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagaa 8609912  T
Q  101 cgaatttgaggtattagtctagaaaaaa 128  Q
    ||||||||||||||||||| || |||||    
T  8609913 cgaatttgaggtattagtcaagtaaaaa 8609940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13282596 - 13282477
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||| || ||| |    
T  13282596 cggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 13282497  T
Q  101 cgaatttgaggtattagtct 120  Q
    ||||||||||||||||||||    
T  13282496 cgaatttgaggtattagtct 13282477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 13108362 - 13108480
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||| | | |||||||||||||||||||| | ||||| ||||||||||||| || ||| |    
T  13108362 cggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttagccgattttttaaaattcaagga 13108461  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||| ||||||||    
T  13108462 cgaatttgagttattagtc 13108480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5036563 - 5036446
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||| |||||||||||| ||||| | ||||||||| ||||||||||| |||||| ||||||||||||| |||||| || ||||||||||| |||||| |    
T  5036563 cggagagaccattttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggacgaatttgacggattttttaaaatttaagga 5036464  T
Q  101 cgaatttgaggtattagt 118  Q
    ||||||||||||||||||    
T  5036463 cgaatttgaggtattagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 13486127 - 13486243
Alignment:
Q  3 gagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacg 102  Q
    |||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||| || |||| | |||||||||| ||| || ||| ||     
T  13486127 gagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatccagagacgaatctgaccgatttttaaaaattcaagcaca 13486226  T
Q  103 aatttgaggtattagtc 119  Q
    |||||||||||||||||    
T  13486227 aatttgaggtattagtc 13486243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 22272453 - 22272334
Alignment:
Q  2 ggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga--ttttttaaactttaaga 99  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||| || ||  ||||||||| || ||      
T  22272453 ggagggactattttgatggacgtttgtaaaattcagggactaaatagatattacgcaaaattcagggacgaatttgactgattttttttaaaattcaaag 22272354  T
Q  100 acgaatttgaggtattagtc 119  Q
    ||||||||||||||||||||    
T  22272353 acgaatttgaggtattagtc 22272334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26242340 - 26242455
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||||| ||||| ||||||  | ||||||| ||| || |||||    
T  26242340 cggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaatttagggacgaatttggctgatttttgaaaattcaagaa 26242439  T
Q  101 cgaatttgaggtatta 116  Q
    |||| |||||||||||    
T  26242440 cgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41825670 - 41825785
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||| ||| |||||||   ||||||| ||| || ||| |    
T  41825670 cggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttatttgatttttgaaaattcaagga 41825769  T
Q  101 cgaatttgaggtatta 116  Q
    ||||||||||||||||    
T  41825770 cgaatttgaggtatta 41825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 38547345 - 38547228
Alignment:
Q  2 ggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaac 101  Q
    ||||||||||||||||||||||| | ||||||||||||||||| | | |||||||||||||||| ||| | ||||  ||||||||||||| || ||| ||    
T  38547345 ggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtatttggccgattttttaaaattcaaggac 38547246  T
Q  102 gaatttgaggtattagtc 119  Q
    ||| ||||||||||||||    
T  38547245 gaacttgaggtattagtc 38547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 42943426 - 42943515
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||| || ||| ||||||||||||||||||||    
T  42943426 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 42943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42941892 - 42941777
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| |||||||||||| | | ||||||||||||||||||||  |||||| ||||||||||||| ||||||  | ||||||||||| || ||| |    
T  42941892 cggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacgaatttggctgattttttaaaattcaagga 42941793  T
Q  101 cgaatttgaggtatta 116  Q
    ||||||||||||||||    
T  42941792 cgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 41042610 - 41042728
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||| |||||| |||||||||||||  |||||  || |||||||||| || ||| |    
T  41042610 cggagggaccattttgatggacgcctgtaaaattcagggactaaatagatatttcacaaaattcagggacaaatttggccaattttttaaaattcaagga 41042709  T
Q  101 cgaatttgaggtattagtc 119  Q
    || |||| |||||||||||    
T  41042710 cggatttaaggtattagtc 41042728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 27691260 - 27691154
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||| | ||||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| |||||||||||||    
T  27691260 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggt 27691161  T
Q  113 attagtc 119  Q
    |||||||    
T  27691160 attagtc 27691154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 5038062 - 5038150
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||||||| |||||||||||||||| | | |||||| |||||||||||||| || ||| ||||||||||||||||||||    
T  5038062 aaattcagggactaaatagctatttcgcaaaattcaagaacgaatttgaccgattttttaaaattcaag-acgaatttgaggtattagtc 5038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9673191 - 9673267
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaattta 77  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||||| |||||| ||||||||||||| |||||||    
T  9673191 cggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaattta 9673267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 7745139 - 7745258
Alignment:
Q  2 ggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaac 101  Q
    |||||||||||||||||||| || | |||||| |||||||||||||  ||||||||||||||||| || ||||||  | ||||||| ||| || ||  ||    
T  7745139 ggagggaccattttgatggatgtctgtaaaatacagggactaaataaatatttcgcaaaattcagagacgaatttggctgatttttgaaaattcaaagac 7745238  T
Q  102 gaatttgaggtattagtcta 121  Q
    ||||||||| ||||||||||    
T  7745239 gaatttgagatattagtcta 7745258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 33708842 - 33708947
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||||| ||||||||||||||||| |   |||||||||||||||||||| ||| || |||| ||||||||| || ||| | |||||||||||    
T  33708842 tttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacgaaattgaccg-ttttttaaaattcaaggatgaatttgaggt 33708940  T
Q  113 attagtc 119  Q
    |||||||    
T  33708941 attagtc 33708947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 34681074 - 34681155
Alignment:
Q  38 ggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||| |||||||||||||||||||| ||||||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  34681074 ggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 34681155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 22273891 - 22273982
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    ||||||||||||||||||| ||||| ||||||||||| ||  |||||  ||||||||||||| || ||| || |||||||||||||||||||    
T  22273891 aaattcagggactaaatagatattttgcaaaattcagagacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtcta 22273982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 26238832 - 26238726
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||| |||   ||||||  ||||||||||| |||||||||||||||||||| ||||||  | ||||||| ||| || ||| |||||||||||||    
T  26238832 tttgatggacattttgtaaattcgaggactaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggt 26238733  T
Q  113 attagtc 119  Q
    |||||||    
T  26238732 attagtc 26238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 13106893 - 13106804
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||||||| ||  ||||||||| ||| || ||| |||||||| |||||||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaaggtattagtc 13106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 29237240 - 29237151
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | ||||||| |||||||||||| ||| || |||||||||| ||| || ||| ||||||||||||||||||||    
T  29237240 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 35509303 - 35509214
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| || |||||||||| ||| || ||| || |||||||||||||||||    
T  35509303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttgaggtattagtc 35509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 43262145 - 43262226
Alignment:
Q  38 ggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||| |||||||||||||| ||||  ||||||| | ||||||| ||| |||||| ||||||||||||||||||||    
T  43262145 ggactaaatagatatttcgcaaaatttagggtcgaatttagctgatttttgaaaatttaaggacgaatttgaggtattagtc 43262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 33707295 - 33707207
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagt 118  Q
    ||||||||||||||| | | ||||||| |||||||||||| ||| || |||||||||| ||| || ||| |||||||||||||||||||    
T  33707295 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 33707207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 601675 - 601794
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   ||||||||||||||| | | ||||||| |||||||||||| ||| ||  ||||||||| ||| || ||| |    
T  601675 cggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagga 601774  T
Q  101 cgaatttgaggtattagtct 120  Q
    ||||||||||||||||||||    
T  601775 cgaatttgaggtattagtct 601794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 27692837 - 27692926
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | ||||| |||||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 33762713 - 33762802
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | ||||||| |||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 33762802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 35510819 - 35510908
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||| ||||||||| ||| ||| || |||||||||| ||| || ||| ||||||||||||||||||||    
T  35510819 aaattcagggactaatttgatatttcacaaaattcaaggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 35510908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 38548831 - 38548920
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||| ||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  38548831 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 38548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 29239187 - 29239278
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    ||||||||||||||| | | ||||||| |||||| ||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcta 29239278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 41823971 - 41823888
Alignment:
Q  38 ggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    ||||||||||| |||||||||||||||| ||| ||| ||| | ||||||| ||| || ||| |||||||| |||||||||||||    
T  41823971 ggactaaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaaggacgaatttaaggtattagtcta 41823888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 8608327 - 8608237
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaatt-cagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||| |||||| ||| || |||||||||| ||| || ||| |||||||| |||||||||||    
T  8608327 aaattcagggactaatttgatatttcgcaaaatttcagggacgaaattgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 8608237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 33761158 - 33761069
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  | ||||||| ||| || ||  ||||||||||||||||||||    
T  33761158 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttgaggtattagtc 33761069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 13484634 - 13484544
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    ||||||| |||| |||||   ||||||||||||||||||| ||||||  ||||||||| ||| || ||  |||||||||||| ||||||||    
T  13484634 aaattcaaggacaaaataacaatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggcattagtct 13484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 40339709 - 40339771
Alignment:
Q  4 agggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcag 66  Q
    ||||||||||||||||||| | | ||||||||| ||||||||||| |||||| || |||||||    
T  40339709 agggaccattttgatggacatctgtaaaattcatggactaaatagatatttcacataattcag 40339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 9672066 - 9672020
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaattt 76  Q
    |||||| |||||||||||| |||||||||||||||| ||| ||||||    
T  9672066 aaattcggggactaaatagatatttcgcaaaattcatggacgaattt 9672020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 13283995 - 13284081
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    ||||||| ||||||| | | ||||||||||||||||||||  || ||  ||||||||| ||| || ||| ||||||||| |||||||    
T  13283995 aaattcatggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgtggtatta 13284081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 41040838 - 41040720
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||||  |||||| ||| |||   ||||||| |||| |||||| ||||| | |||||||||  | ||||||| ||||||||| ||| || ||  |    
T  41040838 cggagggaccgatttgattgacattttgtaaattcaaggacaaaatagctattttggaaaattcagaaacgaatttagccgatttttaaaaattcaaaga 41040739  T
Q  101 cgaatttgaggtattagtc 119  Q
    | |||||||||||||||||    
T  41040738 caaatttgaggtattagtc 41040720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 15308261 - 15308350
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | ||||||| | |||||||||| ||| ||  ||||||||| ||| || ||| || | |||||||||||||||    
T  15308261 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15308350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 15488630 - 15488719
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | ||||||| | |||||||||| ||| ||  ||||||||| ||| || ||| || | |||||||||||||||    
T  15488630 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15488719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 37526029 - 37526110
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    |||||||||| |||||||||| || |  |||||||||||||||| | | ||||||||| |||| | | |||||||| |||||    
T  37526029 cggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcgcataattgaagaatgaatttgaccga 37526110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 9795591 - 9795535
Alignment:
Q  62 ttcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagt 118  Q
    |||||||||||||||    ||||||| ||| ||||| ||||||||||||||||||||    
T  9795591 ttcagggatgaatttggttgatttttgaaaatttaaaaacgaatttgaggtattagt 9795535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 4e-40; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 34776921 - 34777036
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| ||||||||  || |||||||||| ||||||||    
T  34776921 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaatttggccaattttttaaaatttaagaa 34777020  T
Q  101 cgaatttgaggtatta 116  Q
    ||||||||||||||||    
T  34777021 cgaatttgaggtatta 34777036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 6602453 - 6602335
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||| || |||      
T  6602453 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggataagtttagccgattttttaaaattcaaggt 6602354  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||| ||||||||    
T  6602353 cgaatttgagttattagtc 6602335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 39859235 - 39859355
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||||||||||| |||||| | ||||||||| ||||||||||| ||||||||||||||||||||  |||||  ||||||||||||| || ||| |    
T  39859235 cggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgattttttaaaattcaagga 39859334  T
Q  101 cgaatttgaggtattagtcta 121  Q
    |||||||||||||||||||||    
T  39859335 cgaatttgaggtattagtcta 39859355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 24228418 - 24228530
Alignment:
Q  4 agggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacga 103  Q
    ||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||||||||||| ||||||  || |||||||||| || ||||||||    
T  24228418 agggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccaattttttaaaattcaagaacga 24228517  T
Q  104 atttgaggtatta 116  Q
    | |||||||||||    
T  24228518 aattgaggtatta 24228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 37115532 - 37115651
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| |||||||||||||| | ||||||||||| ||||||||| ||||| |||||||||||| | |||||| || ||||||||||| || ||  |    
T  37115532 cggagggactattttgatggacgtctgtaaaattcaggtactaaatagatattttgcaaaattcaggaacgaatttgactgattttttaaaattcaatga 37115631  T
Q  101 cgaatttgaggtattagtct 120  Q
    ||||||||||||||||||||    
T  37115632 cgaatttgaggtattagtct 37115651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30940431 - 30940549
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||| |||||| || || ||||||  ||||||||||||| || |||||    
T  30940431 cggagagaccattttgatgaacgtttgtaaaattcagggactaaatagatatttcgtaaaattaagagacgaatttggccgattttttaaaattcaagaa 30940530  T
Q  101 cgaatttgaggtattagtc 119  Q
    | ||||| |||||||||||    
T  30940531 caaatttaaggtattagtc 30940549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 37114030 - 37113940
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||| || ||| |||||||||||||||||||||    
T  37114030 aaatttagggactaaatagatatttcgcaaaattcagggatgaatttgaccaattttttaaaattcaaggacgaatttgaggtattagtct 37113940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 45359453 - 45359336
Alignment:
Q  2 ggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaac 101  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||| |||||||||||||||| ||| | |||| |||||||||||||| || | | ||    
T  45359453 ggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcaaggacggatttgaccgattttttaaaattcatggac 45359354  T
Q  102 gaatttgaggtattagtc 119  Q
     ||||| |||||||||||    
T  45359353 aaatttaaggtattagtc 45359336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 47386221 - 47386333
Alignment:
Q  7 gaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatt 106  Q
    |||||||||||||||||| | ||||||| || |||||||||  |||||||||||||||| ||| |||||| || ||||||||||| || ||| |||||||    
T  47386221 gaccattttgatggacgtctgtaaaatttagagactaaataaatatttcgcaaaattcaaggacgaatttgactgattttttaaaattaaaggacgaatt 47386320  T
Q  107 tgaggtattagtc 119  Q
    |||||||||||||    
T  47386321 tgaggtattagtc 47386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 27666083 - 27666189
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||||| ||||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| |||||||||||||    
T  27666083 tttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggt 27666182  T
Q  113 attagtc 119  Q
    |||||||    
T  27666183 attagtc 27666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 38474149 - 38474267
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||| ||||||||||||| | ||| | ||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||| ||| ||  || |    
T  38474149 cggatggaccattttgataggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcgagga 38474248  T
Q  101 cgaatttgaggtattagtc 119  Q
    | |||||||||||||||||    
T  38474249 ctaatttgaggtattagtc 38474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 39857734 - 39857648
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    |||||| |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| || ||| |||||||||||||||||    
T  39857734 aaattctgggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 56435 - 56330
Alignment:
Q  14 ttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggta 113  Q
    ||||||||||| | ||||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||    
T  56435 ttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggta 56336  T
Q  114 ttagtc 119  Q
    ||||||    
T  56335 ttagtc 56330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 13169683 - 13169772
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  13169683 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 13169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 23904672 - 23904583
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||| ||||||||||| ||||| ||||||||||| || |||||| |||||||||||||| || ||| ||||||||||||||||||||    
T  23904672 aaattcatggactaaatagctattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 23904583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 29996521 - 29996638
Alignment:
Q  2 ggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaac 101  Q
    |||||||| | |||||||||||| | ||||||||||||| ||| | | ||||||||||||||||||||  || || |||||||||| ||| || ||| ||    
T  29996521 ggagggacgaatttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggac 29996620  T
Q  102 gaatttgaggtattagtc 119  Q
    ||||||||||||||||||    
T  29996621 gaatttgaggtattagtc 29996638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 34775087 - 34774996
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    ||||||||||||||||||| ||||| |||||||||| | |||||||| |||||||||||||| || ||  ||||||||||| ||||||||||    
T  34775087 aaattcagggactaaatagctattttgcaaaattcatgaatgaatttgaccgattttttaaaattcaaagacgaatttgagatattagtcta 34774996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 6605397 - 6605483
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    ||||||||||||||||||| |||||||||||||||||| |  ||||| |||||||||||||| || ||| || ||||||||||||||    
T  6605397 aaattcagggactaaatagctatttcgcaaaattcaggaacaaatttgaccgattttttaaaattcaaggacaaatttgaggtatta 6605483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 35403619 - 35403708
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||||||| || ||| ||||||||||||||||||||    
T  35403619 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttgaggtattagtc 35403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13168241 - 13168148
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagg---gactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaa 91  Q
    |||| ||||||||||||||||||| | |||||||||||   |||||||||| |||||||||||||||| ||| ||||||  |||||||||||||    
T  13168241 cggatggaccattttgatggacgtctgtaaaattcaggagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaa 13168148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 37796187 - 37796302
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| ||||||||||||||   ||||||||||||||||||||| ||||||||||||||   ||| ||||||  | ||||||| ||| || ||| |    
T  37796187 cggagggactattttgatggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaagga 37796286  T
Q  101 cgaatttgaggtatta 116  Q
    | ||||||||||||||    
T  37796287 caaatttgaggtatta 37796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 35402058 - 35401968
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||| ||||||||| ||| || ||| ||||||||||| |||||||||    
T  35402058 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttgagatattagtct 35401968  T

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Target: chr7; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 48227941 - 48228027
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    |||||||||||| |||||| ||||||||||||||||  || |||||| |||||||||||||| || ||  |||||||||||||||||    
T  48227941 aaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaaattcaaagacgaatttgaggtatta 48228027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 24226670 - 24226582
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagt 118  Q
    ||||||| |||| |||||| |||||||||||||||| ||| ||||||  ||||||||| ||| || ||| |||||||||||||||||||    
T  24226670 aaattcaaggacaaaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagt 24226582  T

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Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 13039641 - 13039722
Alignment:
Q  29 aaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgag 110  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| |  ||||||| ||| || ||| ||||| |||||    
T  13039641 aaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaacttgag 13039722  T

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Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 33038803 - 33038884
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    |||||||||| ||||||||||||| |  |||||||||||||||| | | ||||||||| |||| |||||||||||| |||||    
T  33038803 cggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccga 33038884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 35691516 - 35691431
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatt 115  Q
    ||||||| |||| |||||| |||||||||||||| || || |||||| |||||||||| ||| || ||| ||||||||||||||||    
T  35691516 aaattcaaggacaaaatagctatttcgcaaaatttagagacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtatt 35691431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 46437196 - 46437105
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    ||||||| |||| |||||| ||||||||||||||||  || ||||||  | ||||||| ||| || ||| ||||||||||||||||||||||    
T  46437196 aaattcaaggacaaaatagctatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtcta 46437105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 47384383 - 47384292
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    |||||| |||||||| ||| |||||||||||||||| ||| ||||||  |  |||||| ||| || ||| ||||||||||||||||||||||    
T  47384383 aaattcggggactaattagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaaggacgaatttgaggtattagtcta 47384292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 22155847 - 22155936
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    |||||||||||| |||||| ||||| |||||||||| ||| ||||||  ||||||||| ||| || ||| ||||| || |||||||||||    
T  22155847 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 22211762 - 22211851
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    |||||||||||| |||||| ||||| |||||||||| ||| ||||||  ||||||||| ||| || ||| ||||| || |||||||||||    
T  22211762 aaattcagggacaaaatagctattttgcaaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22211851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 35693377 - 35693453
Alignment:
Q  2 ggagggaccattttgatggacgtttataaaattcagggactaa--atagttatttcgcaaaattcagggatgaattt 76  Q
    ||||||||||||||||||||||| | |||||||||||||||||  | || |||| ||||||||||| ||| ||||||    
T  35693377 ggagggaccattttgatggacgtctgtaaaattcagggactaattagagatattccgcaaaattcaaggacgaattt 35693453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 37791744 - 37791657
Alignment:
Q  29 aaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    |||||| ||||||||||||| ||||| ||||||||  |||||||||||  | ||||||||||| |||||  ||||| || ||||||||    
T  37791744 aaaatttagggactaaatagatatttggcaaaatttggggatgaatttggctgattttttaaaatttaaagacgaagtttaggtatta 37791657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 20478148 - 20478042
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||| |  |||||||||||||||| | | ||||||| |||||||||| | ||| ||  ||||||||| ||| || ||| || | ||||||||    
T  20478148 tttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacgaaattggccgatttttcaaaattcaaggactattttgaggt 20478049  T
Q  113 attagtc 119  Q
    |||||||    
T  20478048 attagtc 20478042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 20479690 - 20479808
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   ||||||||||||||| | | ||||||| |||||||||||| ||| ||  ||||||||| ||| || ||| |    
T  20479690 cggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagga 20479789  T
Q  101 cgaatttgaggtattagtc 119  Q
    | | |||||||||||||||    
T  20479790 ctattttgaggtattagtc 20479808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 78014 - 78103
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    |||||||||||| || | | ||||| |||||||||||||| ||| ||  ||||||||| ||| || ||  ||||||||||||||||||||    
T  78014 aaattcagggacaaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtc 78103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 2167597 - 2167516
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    |||||||||| ||||||||| ||| |   ||||||||||||||| | | ||||||||| |||| |||||||||||| |||||    
T  2167597 cggagggacctttttgatgggcgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccga 2167516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 35344296 - 35344371
Alignment:
Q  1 cggagggaccattttgatggacgt-ttataaaattcagggactaaatagttatttcgcaaaattcagggatgaattt 76  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||| | ||||||||| |||| ||||| ||||||    
T  35344296 cggagggacctttttgatggacgtcttat-aaattcagggattaaattgatatttcgcataattgagggacgaattt 35344371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 48852359 - 48852415
Alignment:
Q  7 gaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaatt 63  Q
    |||||||||||||||||| | ||||||||| ||| ||||||| ||||| ||||||||    
T  48852359 gaccattttgatggacgtctgtaaaattcaaggattaaatagatattttgcaaaatt 48852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13018153 - 13018036
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatag--ttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaag 98  Q
    |||||||||||||||||||||||| | | |||||||| ||  ||||||   |||||||| |||||   ||| ||||||  | ||||||||||| || |||    
T  13018153 cggagggaccattttgatggacgtatgttaaattcagagatgaaatagatatatttcgctaaatttgaggacgaatttggctgattttttaaaattcaag 13018054  T
Q  99 aacgaatttgaggtatta 116  Q
     | |||||||||||||||    
T  13018053 gatgaatttgaggtatta 13018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 27664519 - 27664433
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    ||||||||||||||| | | ||||| ||||||||||||||  || ||  ||||||||| ||| || ||| || ||||||||||||||    
T  27664519 aaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaaattcaaggactaatttgaggtatta 27664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 38549653 - 38549547
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||| |||   ||||||  ||| ||||||| |||||| ||||||||||||| ||| ||  | ||||||| ||| || ||| |||||||| ||||    
T  38549653 tttgatggacattttgtaaattcgaggattaaatagatatttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacgaatttaaggt 38549554  T
Q  113 attagtc 119  Q
    |||||||    
T  38549553 attagtc 38549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 45361279 - 45361365
Alignment:
Q  33 ttcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    |||| ||||||||||  ||||| |||||||||||| |  || || ||| |||||||||| || ||| | ||||||||||||||||||    
T  45361279 ttcaaggactaaataactattttgcaaaattcaggaacaaaattgacccattttttaaaattcaaggaagaatttgaggtattagtc 45361365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 23906295 - 23906356
Alignment:
Q  58 aaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    |||||| ||||| ||||||  ||||||||||||| || ||| | ||||||||||||||||||    
T  23906295 aaaatttagggacgaatttggccgattttttaaaattcaaggaggaatttgaggtattagtc 23906356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 43009394 - 43009334
Alignment:
Q  9 ccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcaggga 69  Q
    |||||||||||||| ||| | |||||||||||| |||||| |||||||  ||||| |||||    
T  43009394 ccattttgatggacatttgttaaattcagggacaaaatagctatttcgataaattgaggga 43009334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 4e-40; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 17574436 - 17574309
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||| || ||| |    
T  17574436 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 17574337  T
Q  101 cgaatttgaggtattagtctagaaaaaa 128  Q
    ||||||||||||||||||| | ||||||    
T  17574336 cgaatttgaggtattagtcaataaaaaa 17574309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 36057619 - 36057737
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | |||||||||||| |||||||| |||||||||||||||||||| ||||||  ||||||||| ||| || ||| |    
T  36057619 cggagggaccattttgatggacgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaagga 36057718  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  36057719 cgaatttgaggtattagtc 36057737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 2179905 - 2179786
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||||||||||||||| || | ||||||||||||| ||||||| |||||| ||||||||||||| |||||| |||||||||||||| || ||| |    
T  2179905 cggagggaccattttgatggatgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaatttgaccgattttttaaaattcaagga 2179806  T
Q  101 cgaatttgaggtattagtct 120  Q
    | ||||||||||||||||||    
T  2179805 caaatttgaggtattagtct 2179786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 7267961 - 7267843
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| || ||||||   |||||||||||| || ||| |    
T  7267961 cggagggatcattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaatttggacgattttttaaaattcaagga 7267862  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  7267861 cgaatttgaggtattagtc 7267843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 30463989 - 30463900
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| || ||| ||||||||||||||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 30463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 34327753 - 34327633
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| || ||||||  || |||||  ||| || ||| |    
T  34327753 cggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacgaatttggccaattttagaaaattcaagga 34327654  T
Q  101 cgaatttgaggtattagtcta 121  Q
    |||||||||||||||||||||    
T  34327653 cgaatttgaggtattagtcta 34327633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30468286 - 30468404
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||| |||||||||||||| || || |||||| ||| |||||||||| || ||| |    
T  30468286 cggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaatttgaccaattttttaaaattcaagga 30468385  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||| ||||||||| ||||    
T  30468386 cgaaattgaggtatcagtc 30468404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 8539792 - 8539675
Alignment:
Q  2 ggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaac 101  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||| | | |||||| |  ||||||| ||| || ||| ||    
T  8539792 ggagcgactattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcaagaacgaatttgattgatttttcaaaattcaaggac 8539693  T
Q  102 gaatttgaggtattagtc 119  Q
    ||||||||||||||||||    
T  8539692 gaatttgaggtattagtc 8539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 12738736 - 12738833
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtctagaaaaa 127  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||  ||||||||||||| || ||| |||||||||||||||||||| |||||||    
T  12738736 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcaagaaaaa 12738833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 12801559 - 12801656
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtctagaaaaa 127  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||  ||||||||||||| || ||| |||||||||||||||||||| |||||||    
T  12801559 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcaagaaaaa 12801656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 8541271 - 8541360
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||  ||||||||||||| || ||  ||||||||||||||||||||    
T  8541271 aaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttgaggtattagtc 8541360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 18625014 - 18625129
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||| ||||||||||||||||||  | ||||||||||||||||||||| |||||| ||||||||||||| ||||||| | |||   | ||| || ||| |    
T  18625014 cggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacgaatttagctgatcagtgaaaattcaagga 18625113  T
Q  101 cgaatttgaggtatta 116  Q
    ||||||||||||||||    
T  18625114 cgaatttgaggtatta 18625129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 2852975 - 2852885
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    ||||||||| ||||| | | |||||||||||||||||||| ||| || |||||||||||||| || ||| |||||||||||||||||||||    
T  2852975 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagtct 2852885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 24541230 - 24541336
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||| | ||||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||  |||||||||||||    
T  24541230 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttgaggt 24541329  T
Q  113 attagtc 119  Q
    |||||||    
T  24541330 attagtc 24541336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 7269446 - 7269535
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||| ||||||||||||| || ||  ||||||||||||||||||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtattagtc 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 43492131 - 43492212
Alignment:
Q  28 taaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttga 109  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| ||  | ||||||| ||| |||||| ||||||||||    
T  43492131 taaaattcagggactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttga 43492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2854333 - 2854451
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||| ||||||| | ||||||||||||||||| | | | ||||| |||||||||||| ||| || |||||||||| ||| || ||| |    
T  2854333 cggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaagga 2854431  T
Q  101 cgaatttgaggtattagtct 120  Q
    ||||||||||||||||||||    
T  2854432 cgaatttgaggtattagtct 2854451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 34328827 - 34328918
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    ||||||| |||| |||||| ||||| |||||||||| ||| |||||| |||||||||| ||| || ||| ||||||||||||||||||||||    
T  34328827 aaattcaaggacaaaatagctattttgcaaaattcatggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtcta 34328918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 21842992 - 21843083
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    ||||||||||||||| | | |||||||||||||||| |||  || || |||||||||| ||| || ||| ||||||||||||||||||||||    
T  21842992 aaattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 21843083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 28822090 - 28822176
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    ||||||| |||| ||||||  ||||||||||||||||||| |||||| ||| |||||| ||| || ||| |||||||||||||||||    
T  28822090 aaattcaaggacaaaatagcaatttcgcaaaattcagggacgaatttgacctatttttaaaaattcaaggacgaatttgaggtatta 28822176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 28813765 - 28813856
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga--ttttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||||||| |||||||||||||||| ||| ||||||  || |  |||||| || || ||| ||||||||||||||||||||    
T  28813765 aaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccaatttttttttaaattcaaggacgaatttgaggtattagtc 28813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 40780656 - 40780553
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    ||||||||||||||  |||||||||||||||| | | ||||||| |||||||||||| ||| ||  ||||||||| ||| || ||| || | ||||||||    
T  40780656 tttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatttttcaaaattcaaggactattttgaggt 40780557  T
Q  113 atta 116  Q
    ||||    
T  40780556 atta 40780553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 29621799 - 29621906
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||| |  |||||||||||||||| | | ||||||| |||||||||||| ||| ||  ||||||||| ||| || ||  || | ||||||||    
T  29621799 tttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaatgactattttgaggt 29621898  T
Q  113 attagtct 120  Q
    ||||||||    
T  29621899 attagtct 29621906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 40782182 - 40782300
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   ||||||||||||||| | | ||||||| |||||||||||| ||| ||  ||||||||| ||| || ||| |    
T  40782182 cggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagga 40782281  T
Q  101 cgaatttgaggtattagtc 119  Q
    | | |||||||||||||||    
T  40782282 ctattttgaggtattagtc 40782300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 42473625 - 42473731
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||| | ||||||||||||||||  | | ||||||| | |||||||||| ||| ||  ||||||||| ||| || ||| || | ||||||||    
T  42473625 tttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggt 42473724  T
Q  113 attagtc 119  Q
    |||||||    
T  42473725 attagtc 42473731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35395451 - 35395383
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcaggga 69  Q
    |||||||||| ||||||||||||| ||  ||||||||| ||||||| | ||||||||| |||| |||||    
T  35395451 cggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgaggga 35395383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29620256 - 29620138
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   |||||||| |||||| | | ||||||| |||||||||||| ||| ||  ||||||||| ||| || ||| |    
T  29620256 cggagggactaatttgattgacattttgtaaattcagagactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagga 29620157  T
Q  101 cgaatttgaggtattagtc 119  Q
    | | |||||||||||||||    
T  29620156 ctattttgaggtattagtc 29620138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 38178102 - 38178180
Alignment:
Q  4 agggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    ||||||| ||||||||||||| |   ||||||||  ||||||| | ||||||||| |||| |||||||||||| |||||    
T  38178102 agggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccga 38178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 38205326 - 38205404
Alignment:
Q  4 agggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    ||||||| ||||||||||||| |   ||||||||  ||||||| | ||||||||| |||| |||||||||||| |||||    
T  38205326 agggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccga 38205404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 38596980 - 38596911
Alignment:
Q  7 gaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaattt 76  Q
    |||| ||||||||||||| ||  ||||||||||||||| | | ||||||||| |||| ||||| ||||||    
T  38596980 gacctttttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaattt 38596911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18728608 - 18728676
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcaggga 69  Q
    |||||||||| ||||||||||||| |   ||||||||||||||| | | ||||||||| |||| |||||    
T  18728608 cggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaaggga 18728676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 32087632 - 32087564
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcaggga 69  Q
    |||||||||| ||||||||||||| |  |||||| ||||||||| | | ||||||||| |||| |||||    
T  32087632 cggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaaggga 32087564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 4e-40; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 53190785 - 53190904
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||| || ||| |    
T  53190785 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 53190884  T
Q  101 cgaatttgaggtattagtct 120  Q
    ||||||||||||||||||||    
T  53190885 cgaatttgaggtattagtct 53190904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 54898555 - 54898437
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||| ||||||||||||| |||| | ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| || ||| |    
T  54898555 cggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagga 54898456  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  54898455 cgaatttgaggtattagtc 54898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 2226178 - 2226296
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||| |||||||||| |||| | ||||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||| || ||| |    
T  2226178 cggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 2226277  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  2226278 cgaatttgaggtattagtc 2226296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 17515426 - 17515308
Alignment:
Q  3 gagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacg 102  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||  || |||||| ||| || ||| | |    
T  17515426 gagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagcgatgaatttggccaatttttaaaaattcaaggaag 17515327  T
Q  103 aatttgaggtattagtcta 121  Q
    |||||||||||||||||||    
T  17515326 aatttgaggtattagtcta 17515308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 21348841 - 21348723
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||| ||| ||||||  ||||||||||||| || ||| |    
T  21348841 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaagga 21348742  T
Q  101 cgaatttgaggtattagtc 119  Q
    | |||||||||||||||||    
T  21348741 caaatttgaggtattagtc 21348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 27899107 - 27899225
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||||||||| |||||||| | ||||||||||||||||||||| |||||||||||||||| ||| ||||||  ||||||||||||| || ||| |    
T  27899107 cggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaagga 27899206  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  27899207 cgaatttgaggtattagtc 27899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 30599944 - 30600062
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||| ||||||||||||||||||||  |||||  ||||||| | ||| |||||| |    
T  30599944 cggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttgtaaaaatttaagga 30600043  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  30600044 cgaatttgaggtattagtc 30600062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 35905738 - 35905828
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaa 91  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||    
T  35905738 cggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaa 35905828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 51684728 - 51684610
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||| ||||| |||||||||||||||||||||  | ||||||| ||| || ||| |    
T  51684728 cggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctgatttttgaaaattcaagga 51684629  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||| ||||||||    
T  51684628 cgaatttgagatattagtc 51684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 46112605 - 46112485
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||| ||||| ||||||||||   | ||||||  ||||||||||||| || ||| |    
T  46112605 cggagggaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaataacgaatttggccgattttttaaaattcaagga 46112506  T
Q  101 cgaatttgaggtattagtcta 121  Q
    |||||||||||||||||||||    
T  46112505 cgaatttgaggtattagtcta 46112485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 43765254 - 43765139
Alignment:
Q  2 ggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaac 101  Q
    ||||||||||||||||||||||| | ||||||||||  ||||||||| ||||||||||||||| || | |||||| |||||||||| ||| || ||| ||    
T  43765254 ggagggaccattttgatggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattccggaacgaatttgaccgatttttgaaaattcaaggac 43765155  T
Q  102 gaatttgaggtattag 117  Q
    ||||||||||||||||    
T  43765154 gaatttgaggtattag 43765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 41977868 - 41977750
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||||||||||| |||||| | ||||||||||||||||| | | |||||||| ||||||||||| | ||||  ||||||||||||| || ||| |    
T  41977868 cggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatttggccgattttttaaaattcaagga 41977769  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  41977768 cgaatttgaggtattagtc 41977750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 23293196 - 23293314
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||  ||||||  | |||||||  || || |||||    
T  23293196 cggagggactattttgatggacgtttgtaaaattcatggactaaatagatatttcgcaaaattcaagggcgaatttggctgatttttcgaaattcaagaa 23293295  T
Q  101 cgaatttgaggtattagtc 119  Q
    | |||||||||||||||||    
T  23293296 caaatttgaggtattagtc 23293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 3150341 - 3150243
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtctagaaaaaa 128  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| || |||||||||| ||| || ||| |||||||||||||||||||||| ||||||    
T  3150341 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctataaaaaa 3150243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 3152256 - 3152362
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||| | ||||||||||||||||| | | |||||||||||||||||||||||| ||  ||||||||| ||| |||||| |  ||||||||||    
T  3152256 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaatttaaggataaatttgaggt 3152355  T
Q  113 attagtc 119  Q
    |||||||    
T  3152356 attagtc 3152362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 23291659 - 23291569
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    |||||||| |||||||||| |||||||||||||||||||| ||||||  ||||||||||||| || ||| |||||||| ||||||||||||    
T  23291659 aaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttaaggtattagtct 23291569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 611193 - 611313
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   |||||||||| |||||||| ||||||| |||||||||||| ||||||  | ||||||||||| || ||| |    
T  611193 cggagggactaatttgattgacattttgtaaattcaggggctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaagga 611292  T
Q  101 cgaatttgaggtattagtcta 121  Q
    |||||||||||||||||||||    
T  611293 cgaatttgaggtattagtcta 611313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 2378983 - 2379071
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagt 118  Q
    ||||||| ||||||||||| ||||| |||||||||||||| ||| || |||||||||||||| || ||| |||||||||||||||||||    
T  2378983 aaattcaaggactaaatagctattttgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagt 2379071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42279625 - 42279510
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||| ||||| ||||||||| | || ||||| | | ||||||| ||| || ||  |    
T  42279625 cggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaattctgagacgaattgagctgatttttgaaaattcaatga 42279526  T
Q  101 cgaatttgaggtatta 116  Q
    ||||||||||||||||    
T  42279525 cgaatttgaggtatta 42279510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 30598455 - 30598337
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   ||||||| |||| |||||| ||||||||||||||||||||  ||||| |||||||||| ||| || ||| |    
T  30598455 cggagggactaatttgattgacattttgtaaattcaaggacaaaatagctatttcgcaaaattcagggacaaatttgaccgatttttgaaaattcaagga 30598356  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  30598355 cgaatttgaggtattagtc 30598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 44268070 - 44267981
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||| |||| |||||| ||||||||||||||||| |||||||||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  44268070 aaattcaaggacaaaatagctatttcgcaaaattcagagatgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 44267981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2377147 - 2377032
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||| ||||||||||||||||| | |||||||||| |||||||||  | ||| |||||||||||||| ||||||   | |||||| ||| || || ||    
T  2377147 cggaggaaccattttgatggacgtctgtaaaattcagagactaaatatattttttgcaaaattcagggacgaatttggtcaatttttgaaaattcaaaaa 2377048  T
Q  101 cgaatttgaggtatta 116  Q
    ||||||||||||||||    
T  2377047 cgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 38193510 - 38193601
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcta 38193601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 44794325 - 44794208
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||||||| | |  |||||||||||||||| | | |||||||||||||||||||||||| ||  |||| |||| ||| || ||| |    
T  44794325 cggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccga-ttttcaaaattcaagga 44794227  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  44794226 cgaatttgaggtattagtc 44794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 46310436 - 46310526
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| || |||||||||| ||| || ||  |||||||||||||||||||||    
T  46310436 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttgaggtattagtct 46310526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 38191984 - 38191895
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  || |||||| ||| |||||| ||||||||||||||||||||    
T  38191984 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttgaggtattagtc 38191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 41979352 - 41979441
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 41979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 46197835 - 46197750
Alignment:
Q  4 agggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgatttttta 89  Q
    |||||||||||| |||||||| | ||||||||||| ||||||||| ||||| ||||||||||| || |||||| ||||| ||||||    
T  46197835 agggaccattttaatggacgtctgtaaaattcaggaactaaatagatattttgcaaaattcagagacgaatttgaccgagttttta 46197750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 46308896 - 46308807
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  46308896 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 46308807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 53094273 - 53094362
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 53094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 53187831 - 53187742
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| || |||||||||| ||| || ||| || |||||||||||||||||    
T  53187831 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacaaatttgaggtattagtc 53187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 2660330 - 2660218
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||||||||| | ||||||||| ||||||| | | |||||||||||||||||||| ||| ||   |||||||| ||| || ||| |    
T  2660330 cggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacgaaattggtcgatttttcaaaattcaagga 2660231  T
Q  101 cgaatttgaggta 113  Q
    |||||||||||||    
T  2660230 cgaatttgaggta 2660218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 42282473 - 42282559
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    ||||||| ||||||||||| |||||||||||||||||  | |||||| || ||||||| ||| || ||| |||||||||||||||||    
T  42282473 aaattcaaggactaaatagatatttcgcaaaattcagaaacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 27897239 - 27897151
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    |||||||| |||||||||| || || |||||||||| ||| |||||| | | |||||||||| |||||||| ||||||||||||||||||    
T  27897239 aaattcagagactaaatagctaatt-gcaaaattcatggacgaatttgatccattttttaaaatttaagaaagaatttgaggtattagtc 27897151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 44795890 - 44795979
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||| ||||||| | | |||||||||||||||||| | ||| ||| ||||||||| ||| || ||| ||||||||||||||||||||    
T  44795890 aaattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgaggtattagtc 44795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 46609238 - 46609149
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||| ||||||||||||| ||| ||  ||||||||| ||| || ||||||||||||||| ||||||||    
T  46609238 aaattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacgaatttgagatattagtc 46609149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 46611303 - 46611392
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| || ||  |||||| ||| || ||| ||||||||||||||||||||    
T  46611303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaaggacgaatttgaggtattagtc 46611392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 51686402 - 51686483
Alignment:
Q  38 ggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||  |||||||||||||| ||||| ||||||  | ||||||| ||| |||||| ||||||||||||||||||||    
T  51686402 ggactaaataaatatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaaggacgaatttgaggtattagtc 51686483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 54900074 - 54900163
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    |||||||||||| || | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  54900074 aaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 54900163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 54412547 - 54412633
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    ||||||||| ||||||||| ||| |||||||||||| ||| |||||| ||| |||||||||| || | | ||||||||||| |||||    
T  54412547 aaattcaggaactaaatagatatctcgcaaaattcaaggacgaatttgaccaattttttaaaattcacggacgaatttgagatatta 54412633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 35903914 - 35903825
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | ||||| |||||||||||||||||| ||  | ||||||| ||| || ||| || |||||||||||||||||    
T  35903914 aaattcagggactaatttgatattttgcaaaattcagggatgaaattggctgatttttcaaaattcaaggacaaatttgaggtattagtc 35903825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 119
Target Start/End: Complemental strand, 48829437 - 48829356
Alignment:
Q  38 ggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||| |||||||||||||||||| || |||||  | || |||| ||| || ||| ||||||||||||||||||||    
T  48829437 ggactaaatagatatttcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgaggtattagtc 48829356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 53092712 - 53092623
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||| ||| | | |||||||||||||||||||| ||| ||  || |||||| ||| |||||  ||||||||||||||||||||    
T  53092712 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaagacgaatttgaggtattagtc 53092623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 7884927 - 7884988
Alignment:
Q  58 aaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    |||||||||||| | ||||  ||||||||||||| || ||| ||||||||||||||||||||    
T  7884927 aaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 7884988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7884899 - 7884939
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggac 41  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  7884899 cggagggaccattttgatggacgtctgtaaaattcagggac 7884939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 19987632 - 19987688
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcaggga 69  Q
    |||||||||||| | ||||||| ||||||||| | | ||||||||||||||||||||    
T  19987632 tttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattcaggga 19987688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 48830832 - 48830896
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattca 65  Q
    ||||||||||||||||||||||||   |||||||||  |||||||||| |||||||  |||||||    
T  48830832 cggagggaccattttgatggacgtccgtaaaattcaaagactaaatagatatttcgttaaattca 48830896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 17516973 - 17517052
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttga 109  Q
    ||||||| |||| |||||  |||||||||||||||| | | |||||| |||||||||| ||| || ||| ||||||||||    
T  17516973 aaattcaaggacaaaataactatttcgcaaaattcatgaacgaatttgaccgatttttgaaaattcaaggacgaatttga 17517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 28626529 - 28626411
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   ||||||||||||||  | | ||||||| | |||||||||| ||| || |||||||||| ||| || ||| |    
T  28626529 cggagggactaatttgattgacattttgtaaattcagggactattttgatatttcgaataattcagggacgaaattgaccgatttttcaaaattcaagga 28626430  T
Q  101 cgaatttgaggtattagtc 119  Q
    | | |||||||||||||||    
T  28626429 ctattttgaggtattagtc 28626411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 43767047 - 43767093
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaattt 76  Q
    ||||||| |||| |||||| ||||| |||||||||||||||||||||    
T  43767047 aaattcaaggacaaaatagctattttgcaaaattcagggatgaattt 43767093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 23774268 - 23774195
Alignment:
Q  3 gagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaattt 76  Q
    |||||||  ||||||||||||| |   ||||||||||||||||| | ||||||||| |||| ||||| ||||||    
T  23774268 gagggacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaattt 23774195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 116
Target Start/End: Original strand, 35572525 - 35572610
Alignment:
Q  31 aattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    |||||| ||||||||||| |||||  ||||||||||| |  ||||||| | |||||||||| || ||| |||||||| | ||||||    
T  35572525 aattcaaggactaaatagctatttttcaaaattcaggaacaaatttaatcaattttttaaaattcaaggacgaatttaaagtatta 35572610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 48633995 - 48633914
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    |||||||||| ||||||||||||| |   ||||||||||||||| | | ||||||||| |||| | ||| |||||| |||||    
T  48633995 cggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccga 48633914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 2661908 - 2661992
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtat 114  Q
    ||||||| ||||||| | | |||||||||||||||| ||| ||| ||   |||||||| ||| || ||| |||||||||||||||    
T  2661908 aaattcatggactaatttgatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggacgaatttgaggtat 2661992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 2977335 - 2977443
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||| ||||| ||||||||||||| |   ||||| ||||||| ||| | ||||||||| |||| ||||||||||||  ||||||  | ||| || ||| |    
T  2977335 cggatggacctttttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattcaagga 2977434  T
Q  101 cgaatttga 109  Q
    |||||||||    
T  2977435 cgaatttga 2977443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23888778 - 23888846
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcaggga 69  Q
    |||||||||| |||||||||||||||   |||||||||||||||   | ||||||||| |||| |||||    
T  23888778 cggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgaggga 23888846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 33111930 - 33111878
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    ||||||||||| ||||| | ||||||||| |||| |||||||||||| |||||    
T  33111930 aaattcagggattaaattgatatttcgcataattgagggatgaatttgaccga 33111878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44276222 - 44276266
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaa 45  Q
    |||||||||||||||||||| ||| | ||||||||| ||||||||    
T  44276222 cggagggaccattttgatgggcgtctgtaaaattcaaggactaaa 44276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 16763194 - 16763076
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| ||| || ||| |    
T  16763194 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcaagga 16763095  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  16763094 cgaatttgaggtattagtc 16763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 44709771 - 44709889
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||  ||||||  ||| ||||||||| || ||| |    
T  44709771 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaatttggccggttttttaaaattcaagga 44709870  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  44709871 cgaatttgaggtattagtc 44709889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 39664774 - 39664892
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| ||||||| |||| ||||||  ||||||||||||| || ||| |    
T  39664774 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacgaatttggccgattttttaaaattcaagga 39664873  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  39664874 cgaatttgaggtattagtc 39664892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 14389110 - 14389228
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||| ||| || ||  |    
T  14389110 cggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatga 14389209  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  14389210 cgaatttgaggtattagtc 14389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 17696324 - 17696204
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||  ||||||||| ||| || ||| |    
T  17696324 cggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatgaatttggccgatttttgaaaattcaagga 17696225  T
Q  101 cgaatttgaggtattagtcta 121  Q
    |||||||||||||||| ||||    
T  17696224 cgaatttgaggtattaatcta 17696204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 39455287 - 39455169
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||| |||||||||||||||||| | ||||||||| ||||||||||| ||||| ||||||||||||  |||||||||||||||||||||| || ||| |    
T  39455287 cggagagaccattttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaggactgaatttaaccgattttttaaaattcaagga 39455188  T
Q  101 cgaatttgaggtattagtc 119  Q
    | |||||||| ||||||||    
T  39455187 caaatttgagatattagtc 39455169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 40560341 - 40560223
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| ||||||  | ||||||||||| || ||  |    
T  40560341 cggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggctgattttttaaaattcaaaga 40560242  T
Q  101 cgaatttgaggtattagtc 119  Q
    ||||||||| |||||||||    
T  40560241 cgaatttgaagtattagtc 40560223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 19908272 - 19908393
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga-ttttttaaactttaaga 99  Q
    ||||||||||||||||| |||||| | ||||||||| ||||||||||| ||||||||||||||||||||  |||||  |||| ||||||||| || |||     
T  19908272 cggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgatttttttaaaattcaagg 19908371  T
Q  100 acgaatttgaggtattagtcta 121  Q
    ||||||||||||||||||||||    
T  19908372 acgaatttgaggtattagtcta 19908393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 2767050 - 2766934
Alignment:
Q  3 gagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacg 102  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||| |||||||||||||||| ||| || ||| |||||||||| ||| || ||| |||    
T  2767050 gagggaccattttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgagtttgaccgatttttaaaaattcaaggacg 2766951  T
Q  103 aatttgaggtattagtc 119  Q
    |||||||| ||||||||    
T  2766950 aatttgagctattagtc 2766934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 16376825 - 16376736
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||||||||| || ||  ||||||||||||||||||||    
T  16376825 aaattcagggactaaatagctatttcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgaggtattagtc 16376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 6797625 - 6797507
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||| ||||||||||| ||||| | ||||||| ||||||||||||| |||||||||||||||||| | ||||||| || |||||||||| || ||  |    
T  6797625 cggaggaaccattttgatagacgtctgtaaaattaagggactaaatagatatttcgcaaaattcaggaacgaatttagccaattttttaaaattcaaata 6797526  T
Q  101 cgaatttgaggtattagtc 119  Q
     |||||| |||||||||||    
T  6797525 tgaatttaaggtattagtc 6797507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 39663243 - 39663145
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtctagaaaaaa 128  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||| |||||||||| ||| || ||| |||||||| ||||||||||| | ||||||    
T  39663243 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaattttaggtattagtccaaaaaaaa 39663145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 42519232 - 42519346
Alignment:
Q  2 ggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgc-aaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||| ||||| || |||||||| |||  ||||| | | |||||||||| || ||| |    
T  42519232 ggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgcaaaaattcaaggactaatttgatcaattttttaaaattcaagga 42519331  T
Q  101 cgaatttgaggtatt 115  Q
    |||||||||||||||    
T  42519332 cgaatttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 19906764 - 19906685
Alignment:
Q  37 gggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| || ||| |||||||| ||||||||    
T  19906764 gggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 19906685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 16377223 - 16377305
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgat 83  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||| ||||| ||||||||||||||  ||||| ||||||    
T  16377223 cggagggaccattttgatggacgtatgtaaaattcaaggactaaatagatattttgcaaaattcagggacaaatttgaccgat 16377305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 34400403 - 34400314
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||| |||| |||||| |||||||||||||||||||||||||||  ||||||||| ||| || ||| | ||||||||||||||||||    
T  34400403 aaattcaaggacaaaatagctatttcgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtattagtc 34400314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 39456780 - 39456869
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||||||| ||||| |||||||||| ||| |||||||||| |||||||||| || ||| | |||||||| |||||||||    
T  39456780 aaattcagggactaaatagctattttgcaaaattcatggacgaatttaaccaattttttaaaattcaaggatgaatttgaagtattagtc 39456869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 19581520 - 19581412
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||| |||   ||||||  ||||||||||| ||||||||||||||||||||  |||||  | ||||||| ||| |||||| |||||||||||||    
T  19581520 tttgatggacatttggtaaattcgaggactaaatagatatttcgcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatttgaggt 19581421  T
Q  113 attagtcta 121  Q
    |||||||||    
T  19581420 attagtcta 19581412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 14387438 - 14387342
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtctagaaaa 126  Q
    ||||||||||||||| | | ||||||| |||||||||||| ||| ||  ||||||||| ||| || ||| |||||||||||||||||||||| ||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtctaaaaaa 14387342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 16764611 - 16764700
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||| | ||| || ||| ||||||||||||||||||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggtattagtc 16764700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 31475079 - 31475166
Alignment:
Q  29 aaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    |||||||||||| ||||||| |||||| |||||||  | || |||||| || ||||||| ||| || ||||||||| |||||||||||    
T  31475079 aaaattcagggattaaatagatatttctcaaaatttggtgacgaatttgactgatttttgaaaattaaagaacgaagttgaggtatta 31475166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 37646477 - 37646564
Alignment:
Q  29 aaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    |||||||||||||||||||| ||||||||| ||||   ||| |||||| || ||||||| ||| || ||||||||| ||| |||||||    
T  37646477 aaaattcagggactaaatagatatttcgcagaatttgaggacgaatttgactgatttttgaaagttcaagaacgaagttggggtatta 37646564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 6799408 - 6799494
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    ||||||| |||| |||||| ||||| |||||||||| ||| ||||||  ||||||||| ||| || ||| ||||||||||| |||||    
T  6799408 aaattcaaggacaaaatagctatttggcaaaattcatggacgaatttgtccgatttttaaaaattcaaggacgaatttgagatatta 6799494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 24205716 - 24205598
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   ||||||||||||||| | | ||||||| |||||||||||| ||| ||  ||||||||| ||| || ||| |    
T  24205716 cggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagga 24205617  T
Q  101 cgaatttgaggtattagtc 119  Q
    | | |||||||||||||||    
T  24205616 ctattttgaggtattagtc 24205598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 24208080 - 24208186
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||| | ||||||||||||||||| | | ||||||| | |||||||||| ||| ||  ||||||||| ||| || ||| |  | ||||||||    
T  24208080 tttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggagtattttgaggt 24208179  T
Q  113 attagtc 119  Q
    |||||||    
T  24208180 attagtc 24208186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 40561849 - 40561967
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||||  |||||| ||| |||   ||||||||||||||| | | |||||| |||||||||| || ||| ||  ||||||||| ||| || ||  |    
T  40561849 cggagggaccgatttgattgacattttgtaaattcagggactaatttgctatttcacaaaattcagagacgaaattggccgatttttcaaaattcaaaga 40561948  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  40561949 cgaatttgaggtattagtc 40561967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 6783453 - 6783364
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | ||||| | | |||||||||| ||| || |||||||||||||| || ||| || | |||||||||||||||    
T  6783453 aaattcagggactaatttgatattttgaataattcagggacgaaattgaccgattttttaaaattcaaggactattttgaggtattagtc 6783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 41706657 - 41706576
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    |||||||||| ||||||||||||||    ||||||||||| ||||| | ||||||||| |||| ||||| |||||| |||||    
T  41706657 cggagggacctttttgatggacgttcgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccga 41706576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 37417388 - 37417316
Alignment:
Q  4 agggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaattt 76  Q
    ||||||| ||||||||||||| |   ||||||||||||||| | | ||||||||| |||| ||||||||||||    
T  37417388 agggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaattt 37417316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 6786019 - 6786125
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||| | ||||||||||||||||| | | ||||||  | |||| ||||| ||| ||  ||||||||| ||| || ||| || | ||||||||    
T  6786019 tttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggccgatttttcaaaattcaaggactattttgaggt 6786118  T
Q  113 attagtc 119  Q
    |||||||    
T  6786119 attagtc 6786125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 15432435 - 15432365
Alignment:
Q  12 ttttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    ||||||||||||| |   |||||||| |||||||| | ||||||||| |||| |||||||||||| |||||    
T  15432435 ttttgatggacgtctgacaaattcagagactaaattgatatttcgcataattgagggatgaatttgaccga 15432365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 37020614 - 37020508
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||| |  |||||||||||||||| | | ||||||  |||||||| |||  || || |||||||||| ||| || ||| || | ||||||||    
T  37020614 tttgatggacgtctgcaaaattcagggactaatttgatatttcaaaaaattcaaggacaaaattgaccgatttttcaaaattcaaggactattttgaggt 37020515  T
Q  113 attagtc 119  Q
    |||||||    
T  37020514 attagtc 37020508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 37022156 - 37022274
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   ||||||||||||||| | | ||||||| |||||||||||| ||| ||   |||||||| ||| || ||| |    
T  37022156 cggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggtcgatttttcaaaattcaagga 37022255  T
Q  101 cgaatttgaggtattagtc 119  Q
    | | |||||||||||||||    
T  37022256 ctattttgaggtattagtc 37022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 25619777 - 25619697
Alignment:
Q  2 ggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    ||||||||| ||||||||||| | |   ||||||||||||||| | | ||||| ||| |||| |||||||||||| |||||    
T  25619777 ggagggacctttttgatggacatatgacaaattcagggactaagttgatattttgcataattgagggatgaatttgaccga 25619697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29909666 - 29909734
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcaggga 69  Q
    |||||||||| ||||||||||||| |   ||||| ||||||||||| | ||||||||| |||| |||||    
T  29909666 cggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataattgaggga 29909734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 25278374 - 25278492
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||||||||| || ||| |    
T  25278374 cggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagga 25278473  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  25278474 cgaatttgaggtattagtc 25278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 119
Target Start/End: Complemental strand, 27087393 - 27087283
Alignment:
Q  9 ccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttg 108  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||| |||||| |||||||||    
T  27087393 ccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaatttaaggacgaatttg 27087294  T
Q  109 aggtattagtc 119  Q
    |||||||||||    
T  27087293 aggtattagtc 27087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 37344460 - 37344342
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | |||||||||  |||||||||| |||||||||||||||||||| |||||| |||||||||||||| || ||| |    
T  37344460 cggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagga 37344361  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  37344360 cgaatttgaggtattagtc 37344342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 2869697 - 2869578
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||| || |||||||||| |||||||||||||||||||| |||||| |||||||||| ||| || ||| |    
T  2869697 cggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttgaaaattcaagga 2869598  T
Q  101 cgaatttgaggtattagtct 120  Q
    ||||||||||||||||||||    
T  2869597 cgaatttgaggtattagtct 2869578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 4855972 - 4856090
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||| | | |||||||||||||||||||| | ||||  ||||||||||||| || ||| |    
T  4855972 cggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattcaagga 4856071  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  4856072 cgaatttgaggtattagtc 4856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 31238506 - 31238619
Alignment:
Q  6 ggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaat 105  Q
    ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||  |||||  ||||||||||||| || ||| || |||    
T  31238506 ggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgattttttaaaattcaaggacaaat 31238605  T
Q  106 ttgaggtattagtc 119  Q
    ||||||||||||||    
T  31238606 ttgaggtattagtc 31238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 34778144 - 34778264
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||| | | ||||||||||||||||| | | |||||||||||||||||||| | ||||  ||||||||||||| || ||| |    
T  34778144 cggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattcaagga 34778243  T
Q  101 cgaatttgaggtattagtcta 121  Q
    |||||||||||||||||||||    
T  34778244 cgaatttgaggtattagtcta 34778264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 52643640 - 52643736
Alignment:
Q  20 gacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||| ||||||| ||| |||||| |||||||||||||||||    
T  52643640 gacgtttataaaattcagggactaaataaatatttcgcaaaattcagggacgaatttaactgatttttaaaaatttaaggacgaatttgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 6818684 - 6818802
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| ||||| || |||| |||||| || |||  ||||||||||||| || ||| |    
T  6818684 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagtttggccgattttttaaaattcaagga 6818783  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  6818784 cgaatttgaggtattagtc 6818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 51896158 - 51896276
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| |||||||||||| | | ||||||||||||||||||||| ||||||||||||||||||||  ||||| || ||||||||||| |||||| |    
T  51896158 cggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttgactgattttttaaaatttaagga 51896257  T
Q  101 cgaatttgaggtattagtc 119  Q
    || ||||||||||| ||||    
T  51896258 cggatttgaggtatcagtc 51896276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 50556103 - 50556223
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||| ||||| | ||||||| ||||||||||||| ||||||||||||||||| || |||||| || ||||||||||| || ||  |    
T  50556103 cggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaaga 50556202  T
Q  101 cgaatttgaggtattagtcta 121  Q
    |||||||||| ||||||||||    
T  50556203 cgaatttgagatattagtcta 50556223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 3013498 - 3013600
Alignment:
Q  17 atggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||||| ||| |||||| || ||| ||||||| || ||| |||||||||||||||||    
T  3013498 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaatttgactgatgttttaaaattcaaggacgaatttgaggtatta 3013597  T
Q  117 gtc 119  Q
    |||    
T  3013598 gtc 3013600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 46583562 - 46583680
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||||||||| | ||||||||||||||||| | | ||||||||||||||||||||  || || |||||||||| ||| || ||| |    
T  46583562 cggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaagga 46583661  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  46583662 cgaatttgaggtattagtc 46583680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 31236908 - 31236819
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||| ||||||||| ||||||||||||||||||||  ||||| |||||||||||||| || ||| ||||||||||||||||||||    
T  31236908 aaattcaggaactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 31236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 3011944 - 3011858
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    |||||||| |||||||||| |||||||||||||||||| | |||||| || ||||||||||| |||||| |||||||||||||||||    
T  3011944 aaattcagagactaaatagatatttcgcaaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 50554252 - 50554164
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagt 118  Q
    ||||||||| ||||||||| |||||  ||||||||||||| |||||| |||||||||||||| || ||| |||||||||||||||||||    
T  50554252 aaattcaggaactaaatagctattttacaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 50554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 15104559 - 15104484
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaattt 76  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| | ||||||    
T  15104559 cggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacgaattt 15104484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 33602650 - 33602765
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | ||||| |||||| | ||||||||||||||||| | | |||||| ||||||||||||| ||| || |||||||||| ||| || ||| |    
T  33602650 cggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacgaaattgaccgatttttcaaaattcaagga 33602749  T
Q  101 cgaatttgaggtatta 116  Q
    ||||||||||||||||    
T  33602750 cgaatttgaggtatta 33602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 25278975 - 25279077
Alignment:
Q  17 atggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||| ||| | ||||||  | ||||||| ||| || ||| |||||||||||||||||    
T  25278975 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtatta 25279074  T
Q  117 gtc 119  Q
    |||    
T  25279075 gtc 25279077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 26223676 - 26223587
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| || |||||||||| ||| || ||| ||||||||||||||||||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 26223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 2871076 - 2871166
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    |||||||  ||| |||||| |||||||||||||||||||| ||||||| ||||||||| ||| || ||| ||||||||||| |||||||||    
T  2871076 aaattcaaagacaaaatagctatttcgcaaaattcagggacgaatttagccgatttttaaaaattcaaggacgaatttgagatattagtct 2871166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 51894656 - 51894570
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatta 116  Q
    ||||||||||||||||||  ||||||||||||||||| ||  ||||| ||| |||||||||| || |||||||||||||| ||||||    
T  51894656 aaattcagggactaaatatatatttcgcaaaattcagagacaaatttgacccattttttaaaattcaagaacgaatttgatgtatta 51894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 25276831 - 25276742
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||| ||||||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  25276831 aaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 25276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 37345962 - 37346051
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||||||| ||   |||||||| ||| || ||| ||||||||||||||||||||    
T  37345962 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttgaggtattagtc 37346051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 6816933 - 6816866
Alignment:
Q  51 atttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagt 118  Q
    |||| |||||||||||||| |||||| |||||||||||||| || ||| |||||||||||||||||||    
T  6816933 attttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 6816866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 46582099 - 46582000
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtctagaaaaaat 129  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| || ||||||||||||||||||  |||||||    
T  46582099 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttgaggtattagtcttcaaaaaat 46582000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 47013100 - 47013207
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    ||||||||||||||  |||||||||||||||| | | ||||||| |||||||||||| ||| ||  ||||||||| ||| || ||| || | ||||||||    
T  47013100 tttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatttttcaaaattcaaggactattttgaggt 47013199  T
Q  113 attagtct 120  Q
    ||||||||    
T  47013200 attagtct 47013207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 52641969 - 52641887
Alignment:
Q  38 ggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    ||||||||||  |||||||||||||||||||| ||||||  | ||||||| ||| || ||| |||||||||||||||||||||    
T  52641969 ggactaaatatatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtct 52641887  T

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Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 8168029 - 8167940
Alignment:
Q  32 attcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    ||||||||||||| | | ||||||||||||||||| || ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||||    
T  8168029 attcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcta 8167940  T

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Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 34776658 - 34776569
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | ||||||| |||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 34776569  T

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Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 37088144 - 37088225
Alignment:
Q  38 ggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    |||| |||||| |||||||||||||||||| | ||||||  ||||||||||||| || ||| | ||||||||||||||||||    
T  37088144 ggacaaaatagctatttcgcaaaattcaggaacgaatttggccgattttttaaaattcaaggaagaatttgaggtattagtc 37088225  T

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Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 25278934 - 25278854
Alignment:
Q  39 gactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    |||||||||| ||||||||||||||||||||  ||||| || ||||||| ||| || ||| | ||||||||||||||||||    
T  25278934 gactaaatagatatttcgcaaaattcagggacaaatttgactgatttttgaaaattcaaggatgaatttgaggtattagtc 25278854  T

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Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 9120157 - 9120039
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   ||||||||||||||| | | ||||||| |||||||||||| ||| || |||||||||| ||| || ||| |    
T  9120157 cggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaagga 9120058  T
Q  101 cgaatttgaggtattagtc 119  Q
    | | |||||||||||||||    
T  9120057 ctattttgaggtattagtc 9120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 9121686 - 9121800
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||| |  |||||||||||||||| | | ||||||| |||||| ||||| ||| ||  ||||||||| ||| || ||| || | ||||||||    
T  9121686 tttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggactattttgaggt 9121785  T
Q  113 attagtctagaaaaa 127  Q
    ||||||||| |||||    
T  9121786 attagtctaaaaaaa 9121800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 4854499 - 4854410
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | | |||||||||||||||||| ||| || | |||||||| ||| || ||| |||||||||| |||||||||    
T  4854499 aaattcagggactaatttgatctttcgcaaaattcagggacgaaattgaacgatttttcaaaattcaaggacgaatttgaagtattagtc 4854410  T

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Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 8169568 - 8169657
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | ||||| | |||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  8169568 aaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 8169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 27089279 - 27089368
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||| ||| | | |||||| ||||||||| ||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  27089279 aaattcagggattaatttgatatttcacaaaattcaaggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 27089368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 45045009 - 45044949
Alignment:
Q  59 aaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||| |||||  ||| |||||||||| || ||| ||||||||||||||||||||    
T  45045009 aaattcagggacgaattggaccaattttttaaaattcaaggacgaatttgaggtattagtc 45044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 1444152 - 1444271
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   ||||||||||||||| | | ||||| | ||||||||||||  || ||  ||||||||| ||| |||||| |    
T  1444152 cggagggactaatttgattgacattttgtaaattcagggactaatttgatattttgaaaaattcagggacaaaattggccgatttttcaaaatttaagga 1444251  T
Q  101 cgaatttgaggtattagtct 120  Q
    | | ||||||||||||||||    
T  1444252 ctattttgaggtattagtct 1444271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 33599249 - 33599186
Alignment:
Q  57 caaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    ||||||||| ||| ||||||  ||||||||| ||| || ||| |||||||||||||||||||||    
T  33599249 caaaattcaaggacgaatttgcccgatttttcaaaattcaaggacgaatttgaggtattagtct 33599186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42134600 - 42134529
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatga 72  Q
    |||||||||| ||||||||||||| |   ||||||||||||||| | | ||||||||| |||| ||||||||    
T  42134600 cggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatga 42134529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 33599287 - 33599229
Alignment:
Q  50 tatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttg 108  Q
    |||||||||||||||| ||| |||||| |||||||||| ||| || ||| |||||||||    
T  33599287 tatttcgcaaaattcatggacgaatttgaccgatttttcaaaattcaaggacgaatttg 33599229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 47011545 - 47011456
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | ||||||| |||||||| ||| ||| ||  ||||||||| ||| || ||| || | |||||||||||||||    
T  47011545 aaattcagggactaatttgatatttcgaaaaattcatggacgaaattgtccgatttttcaaaattcaaggactattttgaggtattagtc 47011456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 4e-37; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 32439097 - 32439215
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||| || ||  |    
T  32439097 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaatga 32439196  T
Q  101 cgaatttgaggtattagtc 119  Q
    | |||||||||||||||||    
T  32439197 ctaatttgaggtattagtc 32439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 32516995 - 32516877
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| |||||||||||||| | ||||||||| || |||||||| ||||| | |||||||||||| |||||| |||||||||||||| || ||| |    
T  32516995 cggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacgaatttgaccgattttttaaaattcaagga 32516896  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  32516895 cgaatttgaggtattagtc 32516877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20523484 - 20523367
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||| ||| |||||| |||||||||| ||| ||  || |    
T  20523484 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttgaccgatttttgaaaattctagga 20523385  T
Q  101 cgaatttgaggtattagt 118  Q
     |||||||| ||||||||    
T  20523384 agaatttgatgtattagt 20523367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 7372964 - 7373079
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||  |||||||||||||||||||| |||||| ||| |||||| ||| || ||  |    
T  7372964 cggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacgaatttgaccaatttttaaaaattcaatca 7373063  T
Q  101 cgaatttgaggtatta 116  Q
    ||||||||||||||||    
T  7373064 cgaatttgaggtatta 7373079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 13613588 - 13613706
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||||||||| | ||||||||||||||||| | | |||||||||||||||||||| |||||| |||||||||| ||| || ||| |    
T  13613588 cggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaatttgaccgatttttcaaaattcaagga 13613687  T
Q  101 cgaatttgaggtattagtc 119  Q
    ||||||| |||||||||||    
T  13613688 cgaatttaaggtattagtc 13613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 11355340 - 11355223
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||| ||| ||| | ||||||||||||| | ||||| ||||||  ||||||||| || |||||| |||||||||||||| || ||| |    
T  11355340 cggagggaccattttggtggccgtctgtaaaattcagggagttaatagatatttcataaaattcagtgacgaatttgaccgattttttaaaattcaagga 11355241  T
Q  101 cgaatttgaggtattagt 118  Q
    ||||||||||||||||||    
T  11355240 cgaatttgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9398778 - 9398713
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcag 66  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||    
T  9398778 cggagggaccattttgatgaacgtctataaaattcagggactaaatagatatttcgcaaaattcag 9398713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 6899600 - 6899485
Alignment:
Q  4 agggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacga 103  Q
    |||||||||||||||||| || | ||||||| ||||||||||||| |||||| ||||||| || || |||||| || ||||||| ||| || ||| || |    
T  6899600 agggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacgaatttgactgatttttgaaaattcaaggacaa 6899501  T
Q  104 atttgaggtattagtc 119  Q
    ||||||||||||||||    
T  6899500 atttgaggtattagtc 6899485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 10568517 - 10568403
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| |||||||| ||||| | ||||||||||||||||||||  |||||||| ||||||| ||| |||||| || ||||||| ||| || ||| |    
T  10568517 cggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacgaatttgactgatttttgaaaattcaagga 10568418  T
Q  101 cgaatttgaggtatt 115  Q
    ||||||||| |||||    
T  10568417 cgaatttgatgtatt 10568403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 11357194 - 11357284
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    ||||||||||||||||| | |||||  ||||||||||||| |||||| |||||||||||||| || ||| |||||||||| ||||||||||    
T  11357194 aaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtct 11357284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 32518497 - 32518587
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    ||||||||||||||| | | |||||||||||||||||||||||| ||  ||||||||| ||| || ||| |||||||||||||||||||||    
T  32518497 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtct 32518587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 9400035 - 9400124
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    |||||| |||||||| ||| |||||||||||||||| |||||||||| || ||||||| ||| || ||| ||||||||||||||||||||    
T  9400035 aaattcggggactaattagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtattagtc 9400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 20525334 - 20525423
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||| |||| |||||| ||||| ||||||||||||||||||||| ||| |||||| ||| || ||  ||||||||||||||||||||    
T  20525334 aaattcaaggacaaaatagctattttgcaaaattcagggatgaatttgacctatttttaaaaattcaaagacgaatttgaggtattagtc 20525423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 10569902 - 10570010
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||| |||   ||||||  ||||||||||| ||||| |||||||||| ||| ||||||  | ||||||||||| || ||| |||||||||||||    
T  10569902 tttgatggacattttgtaaattcgaggactaaatagatattttgcaaaattcatggacgaatttggctgattttttaaaattcaaggacgaatttgaggt 10570001  T
Q  113 attagtcta 121  Q
    |||||||||    
T  10570002 attagtcta 10570010  T

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Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 13 - 120
Target Start/End: Original strand, 6902881 - 6902987
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||| |||   ||||||  ||||||||||| |||| ||||||||| ||||| |||||| || ||||||| ||| || ||| |||||||||||||    
T  6902881 tttgatggacattttgtaaattcgaggactaaatagatatt-cgcaaaatttagggacgaatttgactgatttttgaaaattcaaggacgaatttgaggt 6902979  T
Q  113 attagtct 120  Q
    ||||||||    
T  6902980 attagtct 6902987  T

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Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 32455909 - 32456015
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||| |  ||||||||| |||||| | | ||||||| |||||||||||| ||| || |||||||||| ||| || ||| || | ||||||||    
T  32455909 tttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggt 32456008  T
Q  113 attagtc 119  Q
    |||||||    
T  32456009 attagtc 32456015  T

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Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 7371264 - 7371175
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||| |||| |||||  ||||||||||||||||||||  |||||  ||||||||| ||| || ||| ||||| ||||||||||||||    
T  7371264 aaattcaaggacaaaatatctatttcgcaaaattcagggaccaatttggccgatttttgaaaattcaaggacgaagttgaggtattagtc 7371175  T

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Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 7051255 - 7051334
Alignment:
Q  40 actaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||| ||||||||||||||||| || |||||| || ||||||||||| || ||   ||||||| |||||||||||    
T  7051255 actaaatagatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaattcgaatttaaggtattagtc 7051334  T

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Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 18645104 - 18645193
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    ||||||| ||||||| | | ||||||||||||||||| || |||||   ||||||||| ||| || ||| |||||||||||||||||||||    
T  18645104 aaattcatggactaatttgatatttcgcaaaattcagagacgaattgt-ccgatttttcaaaattcaaggacgaatttgaggtattagtct 18645193  T

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Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 13610759 - 13610690
Alignment:
Q  50 tatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||||||||  ||||| | |||||||| ||| || ||| |||||||| |||||||||||    
T  13610759 tatttcgcaaaattcagggacaaatttgatcgatttttcaaaattcaaggacgaatttaaggtattagtc 13610690  T

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Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7049875 - 7049835
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggac 41  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  7049875 cggagggaccattttgatggacgtctgtaaaattcagggac 7049835  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 3456854 - 3456780
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttt 87  Q
    |||||||||||| |  |||||||||||||||| | | ||||||| |||||||||||| ||| ||  |||||||||    
T  3456854 tttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgattttt 3456780  T

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Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 3480628 - 3480746
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   ||||||||||||||  | | ||||||| |||||||||||| ||| ||  ||||||||| ||| || ||| |    
T  3480628 cggagggactaatttgattgacattttgtaaattcagggactagtttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaagga 3480727  T
Q  101 cgaatttgaggtattagtc 119  Q
    | | |||||||||||||||    
T  3480728 ctattttgaggtattagtc 3480746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14338481 - 14338543
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaatt 63  Q
    |||||||||||||||||||||||| | | |||||||||||  || |||  |||||||||||||    
T  14338481 cggagggaccattttgatggacgtctgtgaaattcagggatgaattagacatttcgcaaaatt 14338543  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 32454366 - 32454248
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   ||||||||||||||| | | ||||||| |||||||| ||| ||| ||  ||||||||| ||| || ||| |    
T  32454366 cggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcaaggacgaaattggccgatttttcaaaattcaagga 32454267  T
Q  101 cgaatttgaggtattagtc 119  Q
    | | |||||||||||||||    
T  32454266 ctattttgaggtattagtc 32454248  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 8605351 - 8605416
Alignment:
Q  56 gcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    |||||||| ||||| ||||||  | ||||||| ||| || ||| ||||||||||||||||||||||    
T  8605351 gcaaaatttagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtcta 8605416  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 32437208 - 32437140
Alignment:
Q  51 atttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||||||| ||| ||  ||||||||| ||| || ||  || |||||||||||||||||    
T  32437208 atttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacaaatttgaggtattagtc 32437140  T

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Target: chr4 (Bit Score: 74; Significance: 4e-34; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 49523242 - 49523125
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||||||| ||| ||||||| ||||||||||||| || ||  |    
T  49523242 cggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaatttagccgattttttaaaattcaatga 49523143  T
Q  101 cgaatttgaggtattagt 118  Q
    ||||||||||||||||||    
T  49523142 cgaatttgaggtattagt 49523125  T

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Target: chr4; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 51012044 - 51011925
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||||||| | | |||||| |||||||||||||| || ||| |    
T  51012044 cggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaagaaagaatttgaccgattttttaaaattcaagga 51011945  T
Q  101 cgaatttgaggtattagtct 120  Q
    |||||||||| |||||||||    
T  51011944 cgaatttgagatattagtct 51011925  T

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Target: chr4; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 41781657 - 41781539
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||||||||||||||| || | ||||||||||||||||||||  ||||| ||||||||||||||  ||||| |||||||||||||| || |||||    
T  41781657 cggagggaccattttgatggatgtctgtaaaattcagggactaaataaatattttgcaaaattcagggacaaatttgaccgattttttaaaattcaagaa 41781558  T
Q  101 cgaatttgaggtattagtc 119  Q
    | |||||||||||||||||    
T  41781557 caaatttgaggtattagtc 41781539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41761752 - 41761867
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||  |||| ||||||  ||||||||| ||| || ||| |    
T  41761752 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacgaatttggccgatttttgaaaattcaagga 41761851  T
Q  101 cgaatttgaggtatta 116  Q
    ||||||||||||||||    
T  41761852 cgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 48813902 - 48813787
Alignment:
Q  4 agggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacga 103  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||  ||||| ||||||||||||||| |||||  | ||||||| ||| || ||| ||||    
T  48813902 agggaccattttgatggacgtctataaaattcaggaactaaatatatattttgcaaaattcagggataaatttggctgatttttgaaaattcaaggacga 48813803  T
Q  104 atttgaggtattagtc 119  Q
    ||||||||||||||||    
T  48813802 atttgaggtattagtc 48813787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 49524733 - 49524822
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||||| |||||||||||||| || ||| ||||||||||||||||||||    
T  49524733 aaattcagggactaaatagctattttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 49524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 43519530 - 43519424
Alignment:
Q  13 tttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggt 112  Q
    |||||||||||||| ||||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| |||||||||||||    
T  43519530 tttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggt 43519431  T
Q  113 attagtc 119  Q
    |||||||    
T  43519430 attagtc 43519424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 35404451 - 35404569
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||| ||||||||||| ||||||| | ||||||||||||| ||||||  |||||||||||||| | ||| ||||||| ||||||||||||| || ||| |    
T  35404451 cggatggaccattttgttggacgtctgtaaaattcagggattaaataaatatttcgcaaaattgaaggacgaatttagccgattttttaaaattcaagta 35404550  T
Q  101 cgaatttgaggtattagtc 119  Q
     |||| |||||||||||||    
T  35404551 tgaatctgaggtattagtc 35404569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 35401838 - 35401749
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||| ||||||||||| |||||| ||||||||||||| ||||||  ||||||||||||| || ||| ||||||||||||||||||||    
T  35401838 aaattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 35401749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 39345653 - 39345574
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttga 109  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||  ||||||||||||| || ||| ||||||||||    
T  39345653 aaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 48645336 - 48645253
Alignment:
Q  38 ggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    ||||||||||| |||||||||||||||| ||| |||||| || ||||||| ||| || ||| ||||||||||||||||||||||    
T  48645336 ggactaaatagatatttcgcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtcta 48645253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 319362 - 319273
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||| ||||| | | |||||||||||||||||||| ||| || |||||||||| ||| || ||| ||||||||||||||||||||    
T  319362 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 319273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 4173740 - 4173829
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  4173740 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 4173829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 11601786 - 11601674
Alignment:
Q  3 gagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacg 102  Q
    ||||||| |||||||||||||| | ||||||||||||||| ||||  ||||| ||||||||  ||||| ||||| || ||||||| ||| || |||||||    
T  11601786 gagggactattttgatggacgtctgtaaaattcagggact-aatatatattttgcaaaatttggggataaatttgactgatttttgaaaattcaagaacg 11601688  T
Q  103 aatttgaggtatta 116  Q
    ||||| ||||||||    
T  11601687 aattttaggtatta 11601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 33266010 - 33266099
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||| | ||| ||| ||||||||| ||| || ||||||||||||||| ||||||||    
T  33266010 aaattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaagaacgaatttgagatattagtc 33266099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 43507256 - 43507167
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  43507256 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43507167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 43508653 - 43508742
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  43508653 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43508742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 2693259 - 2693373
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||| ||||||||||||||||| ||| |||||||||  |||||||||| |||||||||||||| ||| || |||||  | ||||||||||| || ||  |    
T  2693259 cggatggaccattttgatggacattt-taaaattcaaagactaaatagatatttcgcaaaatttaggaataaatttggctgattttttaaaattcaaaga 2693357  T
Q  101 cgaatttgaggtatta 116  Q
    |||| |||||||||||    
T  2693358 cgaagttgaggtatta 2693373  T

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Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 20493916 - 20493827
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||| ||||||||| |||||||||||||||| | | ||||||  ||||| ||||||| || ||  ||||||||||||||||||||    
T  20493916 aaattcaggaactaaatagatatttcgcaaaattcaagaacgaatttggccgatattttaaaattcaatgacgaatttgaggtattagtc 20493827  T

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Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 33264471 - 33264382
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||| ||||| | | ||||| |||||||||||||| ||| || |||||||||| ||| || ||| ||||||||||||||||||||    
T  33264471 aaattcaggaactaatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 33264382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 51013886 - 51013975
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||| | | | ||||| |||||||||||||| ||| || |||||||||| ||| || ||| ||||||||||||||||||||    
T  51013886 aaattcagggactcatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 51013975  T

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Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 42980753 - 42980689
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattca 65  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||  |||||| ||||||||    
T  42980753 cggagggaccattttgatggacgtctgtaaaattaagggactaaatagaaatttcgtaaaattca 42980689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 48646753 - 48646829
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaattta 77  Q
    |||| |||||||||||||| | || | ||||||||||||||||||||| |||||||| ||||||| ||| |||||||    
T  48646753 cggaaggaccattttgatgaaggtctgtaaaattcagggactaaatagatatttcgctaaattcaaggacgaattta 48646829  T

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Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 320903 - 320989
Alignment:
Q  33 ttcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    |||| ||||||| | | |||||||||||||||| ||||||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  320903 ttcaaggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 320989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 4169775 - 4169685
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    ||||||||||||||| | | ||||||||||||||||| || ||| || | | |||||| ||| || ||| |||||||||||||||||||||    
T  4169775 aaattcagggactaatttgatatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaaggacgaatttgaggtattagtct 4169685  T

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Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 20820075 - 20819986
Alignment:
Q  29 aaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagt 118  Q
    |||||||||||||||||||  ||||| |||||||| ||| || ||||| || ||||||| ||| || ||| ||||| |||||||||||||    
T  20820075 aaaattcagggactaaataaatattttgcaaaatttaggaataaatttgactgatttttgaaaattcaaggacgaagttgaggtattagt 20819986  T

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Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 52868161 - 52868245
Alignment:
Q  7 gaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaa 91  Q
    |||||||||||| | ||| | | |||||||| |||||||||| |||||||||||||| |  || |||||| ||||||||||||||    
T  52868161 gaccattttgataggcgtctgttaaattcagagactaaatagatatttcgcaaaatttatagacgaatttgaccgattttttaaa 52868245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44794766 - 44794847
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    |||||||||| ||||||||||||| |   ||||||||||| ||||| | ||||||||| |||| ||||| |||||| |||||    
T  44794766 cggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccga 44794847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 44558499 - 44558574
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaattt 76  Q
    |||| ||||| ||||||||||||| |   ||||||||||||||| | | ||||||||| |||| ||||||||||||    
T  44558499 cggaaggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaattt 44558574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 11254208 - 11254123
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtatt 115  Q
    ||||||| |||| ||| || |||||||||||||| || || | ||||  ||||||||| ||| || ||| ||||||||||||||||    
T  11254208 aaattcaaggacaaaagagctatttcgcaaaatttagagacggatttggccgatttttaaaaattcaaggacgaatttgaggtatt 11254123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35996181 - 35996100
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    |||||||||| ||||||||||||| |   ||||||||||| ||||| | ||||| ||| |||| ||||| |||||| |||||    
T  35996181 cggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacgaatttgaccga 35996100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 42982452 - 42982509
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttt 87  Q
    ||||||| |||| |||||  |||||||||||||||||||| |||||| || |||||||    
T  42982452 aaattcaaggacaaaataactatttcgcaaaattcagggacgaatttgacagattttt 42982509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 47941929 - 47941848
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccga 82  Q
    |||||||||| ||||||||||||| |   ||||||||||| ||||| | ||||||||| |||| || || |||||| |||||    
T  47941929 cggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacgaatttgaccga 47941848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 43521109 - 43521193
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtat 114  Q
    ||||||||||||||| | | ||||||||||||||||   | ||| || || ||||||| ||| || |||||| ||||||||||||    
T  43521109 aaattcagggactaatttgatatttcgcaaaattcaaaaacgaaattgactgatttttcaaaattcaagaacaaatttgaggtat 43521193  T

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Target: scaffold1454 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1381 - 1266
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| ||||||  |||||||| ||| |||||||||| |||||||||| || ||| |    
T  1381 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcataaaattcatggacgaatttaaccaattttttaaaattcaagga 1282  T
Q  101 cgaatttgaggtatta 116  Q
    || |||||||||||||    
T  1281 cggatttgaggtatta 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 8371 - 8264
Alignment:
Q  8 accattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaattt 107  Q
    |||||||||||||||||  |||||||||||||||||||||| ||||| |||||||||| | | ||||||  || |||||||||| || ||| ||||||||    
T  8371 accattttgatggacgt--ataaaattcagggactaaatagatattttgcaaaattcaagaacgaatttggccaattttttaaaattcaaggacgaattt 8274  T
Q  108 gaggtattag 117  Q
    ||||||||||    
T  8273 gaggtattag 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 55; Significance: 8e-23; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3412 - 3294
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||||||||| | ||||||||||||||||| | | ||||||||||||||||||||  || ||  ||||||||| ||| || ||| |    
T  3412 cggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaagga 3313  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  3312 cgaatttgaggtattagtc 3294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4584 - 4466
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||||||||| | ||||||||||||||||| | | ||||||||||||||||||||  || ||  ||||||||| ||| || ||| |    
T  4584 cggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaagga 4485  T
Q  101 cgaatttgaggtattagtc 119  Q
    |||||||||||||||||||    
T  4484 cgaatttgaggtattagtc 4466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 14343 - 14432
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtc 119  Q
    ||||||||||||||| | | |||||||||||||||||||| ||| ||  ||||||||| ||| || ||| ||||||||||||||||||||    
T  14343 aaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 1555 - 1645
Alignment:
Q  30 aaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtct 120  Q
    ||||||||||||||||| | |||||  ||||||||||||| |||||| |||||||||||||| || ||| |||||||||| ||||||||||    
T  1555 aaattcagggactaaattgctatttttcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtct 1645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 54229 - 54347
Alignment:
Q  1 cggagggaccattttgatggacgtttataaaattcagggactaaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaa 100  Q
    ||||||||| | |||||| ||| |||   ||||||||||||||| | | ||||||| |||||||||||| ||| || |||||||||| ||| || ||| |    
T  54229 cggagggactaatttgattgacattttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaagga 54328  T
Q  101 cgaatttgaggtattagtc 119  Q
    | | |||||||||||||||    
T  54329 ctattttgaggtattagtc 54347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 436341 - 436263
Alignment:
Q  43 aaatagttatttcgcaaaattcagggatgaatttaaccgattttttaaactttaagaacgaatttgaggtattagtcta 121  Q
    |||||| |||||||||||||| | ||||||||||  | ||||||| ||| || ||||||||||||||||| ||| ||||    
T  436341 aaatagatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggtgttactcta 436263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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