View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6609_low_5 (Length: 219)
Name: NF6609_low_5
Description: NF6609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6609_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 22 - 207
Target Start/End: Complemental strand, 45307172 - 45306992
Alignment:
| Q |
22 |
ctagcaataatatatttgacaactagtagctagcttagctagcaatgacaatgagaacagaaatgacaatactgattagggcttttatggacagtgcagt |
121 |
Q |
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| T |
45307172 |
ctagcaataatatatttgacaactagtagctagct-----agcaatgacaatgagaacagaaatgacaatactgattagggcttttatggacagtgcagt |
45307078 |
T |
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| Q |
122 |
atgttatgtagtggggagatgagatatgcacaatcaatattagagagaggggggtcacagacacaatagacacattgctctctgct |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
45307077 |
atgttatgtagtggggagatgagatatgcacaatcaatattagagagaggggggtcacagacacaatagacacattgctctgtgct |
45306992 |
T |
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