View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6612_high_14 (Length: 215)
Name: NF6612_high_14
Description: NF6612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6612_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 5 - 198
Target Start/End: Original strand, 33870494 - 33870687
Alignment:
| Q |
5 |
atgtcgaagaatatggtgagtagtagtcatattttggaaaaggagagatatttcaatcattaattaaaatgatcaagataatataattaaatcgatttat |
104 |
Q |
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| T |
33870494 |
atgttgaaaaatttggtgagtagtagtcatattttggaaaaggagagatatttcaatcattaattaaaatgatcaagataatataattaaatcaatttat |
33870593 |
T |
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| Q |
105 |
aatttgttgaatttttataaagtgggcatttgtattgaaggaagcctctttgaaaatatcttgcatctaacctccatatgggtatgactgtaat |
198 |
Q |
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| T |
33870594 |
aatttgttgaatttttataaagtgggcatttgtattgaaggaagcctctttgaaaatatcttgcatctaacctgcatatgggtatgactctaat |
33870687 |
T |
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