View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6612_low_10 (Length: 279)
Name: NF6612_low_10
Description: NF6612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6612_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 118 - 248
Target Start/End: Original strand, 49698201 - 49698331
Alignment:
| Q |
118 |
agacacaatttttatggagtaaaattgctcgtggccaaccaaacatagacgtaatagaaagaaagtgagacgggtctgaggcagttatagagacacatgc |
217 |
Q |
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| T |
49698201 |
agacacaatttttatggagtaaaattgctcgtggccaaccaaacatagacgtaatagaaagaaagtgagacgggtctgaggcagttgtagagacacatgc |
49698300 |
T |
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| Q |
218 |
atatttttcccccatatattctggttacatg |
248 |
Q |
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| T |
49698301 |
atatttttcccccatatattctggttacatg |
49698331 |
T |
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