View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6612_low_12 (Length: 260)
Name: NF6612_low_12
Description: NF6612
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6612_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 136 - 246
Target Start/End: Original strand, 6089062 - 6089172
Alignment:
| Q |
136 |
ctcatcaagcatagtcaacaatcttgatttattacgaccatcaccaaatggatcttcttcactcaatctttccaaaggagattccatcatcaaagaagaa |
235 |
Q |
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| T |
6089062 |
ctcatcaagcatagtcaacaatcttgatttattgcgaccatcaccaaatggatcttcttcactcaatctttccaaaggagattccatcatcaaagaagaa |
6089161 |
T |
|
| Q |
236 |
tcagcaacaac |
246 |
Q |
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||||||||||| |
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| T |
6089162 |
tcagcaacaac |
6089172 |
T |
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