View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6614_high_4 (Length: 361)
Name: NF6614_high_4
Description: NF6614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6614_high_4 |
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Alignment Details
Target: chr5 (Bit Score: 346; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 1 - 354
Target Start/End: Original strand, 8124671 - 8125024
Alignment:
| Q |
1 |
aagttcagaccttttttgatgatatattcataaacttgttcaattatgtatgtaaagtgcagatatgagagcttgcacttaaataggataaatggtatgg |
100 |
Q |
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| T |
8124671 |
aagttcagaccttttttgatgaaatattcataaacttgttcaattatgtatgtaaagtgcagatatgagagcttgcacttaaataggataaatggtatgg |
8124770 |
T |
|
| Q |
101 |
ccaaggttcttggagtacttgcttctgttggaggagcttcaatcattaccctttacaagggacctaccatttatgctccacatttagcactacatcaagg |
200 |
Q |
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| T |
8124771 |
ccaaggttcttggagtacttgcttctgttggaggagcttcaatcattaccctttacaagggacctaccatttatgctccacatttagcactacatcaagg |
8124870 |
T |
|
| Q |
201 |
acaaattttcttgtctgcatttgaggatgccaatgggaaaaacttgaacttgggtggcatccttctctttggtcattgtttgtgttggtctggttggatt |
300 |
Q |
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| T |
8124871 |
acaaattttcttgtctgcatttgaggatgccaatgggaaaaacttgaacttgggtggcatccttctctttggtcattgtttgtgttggtctggttggatt |
8124970 |
T |
|
| Q |
301 |
gtgatgcaagcatttgttctgaaaaagtactcagcacaactcacaggttctgct |
354 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
8124971 |
gtgatgcaagcatttgttctgaaaaagtactcagcacaactcacagtttctgct |
8125024 |
T |
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