View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6615_high_2 (Length: 363)
Name: NF6615_high_2
Description: NF6615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6615_high_2 |
 | |
|
| [»] scaffold0009 (2 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 250; Significance: 1e-139; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 5 - 331
Target Start/End: Complemental strand, 22990574 - 22990246
Alignment:
| Q |
5 |
gaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattaca |
104 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
22990574 |
gaacaacaaatccgaagcaaaaaaacaaaataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggatagaaacattaca |
22990475 |
T |
|
| Q |
105 |
taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22990474 |
taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag |
22990375 |
T |
|
| Q |
205 |
gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatag-tac--atcctagcttagatt |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| || || | |||||| |
|
|
| T |
22990374 |
gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactaatact-tcctagatt |
22990276 |
T |
|
| Q |
302 |
acttcttaattcatagtacttcctagctta |
331 |
Q |
| |
|
||||||||||||||||||| ||||| |||| |
|
|
| T |
22990275 |
acttcttaattcatagtacatcctatctta |
22990246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 5 - 331
Target Start/End: Original strand, 22714651 - 22714979
Alignment:
| Q |
5 |
gaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattaca |
104 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
22714651 |
gaacaacaaatccgaagcaaaaaaacaaaataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggatagaaacattaca |
22714750 |
T |
|
| Q |
105 |
taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22714751 |
taagttactggtacttcataagagtacttcatagttactagcactttttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag |
22714850 |
T |
|
| Q |
205 |
gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatag-tac--atcctagcttagatt |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| || || | |||||| |
|
|
| T |
22714851 |
gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactaatact-tcctagatt |
22714949 |
T |
|
| Q |
302 |
acttcttaattcatagtacttcctagctta |
331 |
Q |
| |
|
||||||||||||||||||| ||||| |||| |
|
|
| T |
22714950 |
acttcttaattcatagtacatcctatctta |
22714979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 5 - 331
Target Start/End: Original strand, 28948908 - 28949236
Alignment:
| Q |
5 |
gaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattaca |
104 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28948908 |
gaacaacaaatccgaagcaaaaaaacaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggatagaaacattaca |
28949007 |
T |
|
| Q |
105 |
taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag |
204 |
Q |
| |
|
||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28949008 |
taagttatttgtacttcataagagtacttcatagttactagcactttttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag |
28949107 |
T |
|
| Q |
205 |
gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagatta |
302 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | || | ||||||| |
|
|
| T |
28949108 |
gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactattacttcctagatta |
28949207 |
T |
|
| Q |
303 |
cttcttaattcatagtacttcctagctta |
331 |
Q |
| |
|
|||||||||||||||||| |||||||||| |
|
|
| T |
28949208 |
cttcttaattcatagtacatcctagctta |
28949236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 22697172 - 22696864
Alignment:
| Q |
30 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
129 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
22697172 |
caacataagtgaaccataaatacgagcataattatcacacaacataagtcttcattaagggatagaaacattacataagttactagtacttcataagagt |
22697073 |
T |
|
| Q |
130 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
229 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
22697072 |
acttcatagttactaccacttcttagattacttcctaattgaaaggaaaaacataacagtacttcaaagttaccggtacttcctagattacttcttaatt |
22696973 |
T |
|
| Q |
230 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag |
327 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||| || | ||||||||||| | || | |||||||||||||||||||||||||||||||| |
|
|
| T |
22696972 |
taaagacaacagagcattacaacattaaagactaaacaaaatagtacttcatagttactagtacttcgtagattacttcttaattcatagtacttcctag |
22696873 |
T |
|
| Q |
328 |
cttacttcc |
336 |
Q |
| |
|
||| |||| |
|
|
| T |
22696872 |
gttaattcc |
22696864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 30 - 351
Target Start/End: Complemental strand, 46956859 - 46956533
Alignment:
| Q |
30 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
129 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
46956859 |
caacataagtgaacaaaaaatacaagcataattatcacacaacataagccttcattaaggtatagaaacattacataagttactagtacttcataatagt |
46956760 |
T |
|
| Q |
130 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
46956759 |
acttcatagttactagcacttcttagattacttcctaattaaaaggcaaaacataacagtacttgatagttactagtacttcctagattacttcttaatt |
46956660 |
T |
|
| Q |
230 |
taaagacaacggaacattacaacattaaagacta---aacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcc |
324 |
Q |
| |
|
|||||| || |||||||||||||||||||||||| || |||||| | ||||||||| | || | ||||||||||||||||||||||||||| | |
|
|
| T |
46956659 |
taaagataatggaacattacaacattaaagactaaataatataacagtgcttcatagttactagtacttcctagattacttcttaattcatagtactttc |
46956560 |
T |
|
| Q |
325 |
tagcttacttcctagtcacacaggttc |
351 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
46956559 |
tagcttacttcctagtcacacaggttc |
46956533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 28949216 - 28949290
Alignment:
| Q |
277 |
ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc |
351 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
28949216 |
ttcatagtacatcctagcttagattgcttcttaactcatagtacttcctagcttacttcctagtcacataggttc |
28949290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 22714959 - 22715033
Alignment:
| Q |
277 |
ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc |
351 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| |
|
|
| T |
22714959 |
ttcatagtacatcctatcttagattacttcttaattcatagtacttcctaacttacttcctaatcacagaggttc |
22715033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 22990266 - 22990192
Alignment:
| Q |
277 |
ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc |
351 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| |
|
|
| T |
22990266 |
ttcatagtacatcctatcttagattacttcttaattcatagtacttcctaacttacttcctaatcacagaggttc |
22990192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 220; Significance: 1e-121; HSPs: 2)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 5 - 331
Target Start/End: Original strand, 200524 - 200862
Alignment:
| Q |
5 |
gaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattaca |
104 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
200524 |
gaacaacaaatccgaagcaaaaaaacaaaataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggatagaaacattaca |
200623 |
T |
|
| Q |
105 |
taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataac----------agtacttc |
194 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| |
|
|
| T |
200624 |
taagttactggtacttcataagagtacttcatagttactagcacttcttagattaattcctaattgaaaggaaaaacataacagtacttcatagtacttc |
200723 |
T |
|
| Q |
195 |
atagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta-- |
292 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | || |
|
|
| T |
200724 |
atagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactattact |
200823 |
T |
|
| Q |
293 |
gcttagattacttcttaattcatagtacttcctagctta |
331 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
200824 |
tcctagattacttcttaattcatagtacatcctagctta |
200862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 200842 - 200916
Alignment:
| Q |
277 |
ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
200842 |
ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctaatcacagaggttc |
200916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 30 - 351
Target Start/End: Complemental strand, 20087908 - 20087585
Alignment:
| Q |
30 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
129 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
20087908 |
caacataagtgaaccaaaaatacaagcataattatcacacaacataagtcttcattaagggatagaaacattacataagttactagtacttcataatagt |
20087809 |
T |
|
| Q |
130 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
229 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
20087808 |
acttcatagttactagtacttcttagattacttcctaattaaaaggcaaaacataacagtacttcatagttactagtactttctagattacttcttaatt |
20087709 |
T |
|
| Q |
230 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag |
327 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | || | ||||||||||||||||||||| ||||||||| |
|
|
| T |
20087708 |
taaagataacggaacattacaacattaaagactaaatataacagtacttcatagttactagtacttcctagattacttcttaattcataagacttcctag |
20087609 |
T |
|
| Q |
328 |
cttacttcctagtcacacaggttc |
351 |
Q |
| |
|
||||||||||||||||||| |||| |
|
|
| T |
20087608 |
cttacttcctagtcacacaagttc |
20087585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 19646606 - 19646298
Alignment:
| Q |
30 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
129 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
19646606 |
caacataagtgaaccaaaaatacaagcataattatcacacaacataagtcttcattaagggatagaaatattacataagttactggtacttcataagagt |
19646507 |
T |
|
| Q |
130 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
229 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
19646506 |
acttcatagttactaccacttcttagattacttcctaattgaaaggaaaaacataacaatacttcaaagttaccggtacttcctagattacttcttaatt |
19646407 |
T |
|
| Q |
230 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag |
327 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||||||||| | ||||||||||| | || | |||||||||||||||||||||||||||||||| |
|
|
| T |
19646406 |
taaagacaacagaacattacaacattaaagattaaacataagagtacttcatagttactagtacttcgtagattacttcttaattcatagtacttcctag |
19646307 |
T |
|
| Q |
328 |
cttacttcc |
336 |
Q |
| |
|
|||| |||| |
|
|
| T |
19646306 |
cttaattcc |
19646298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 4344518 - 4344211
Alignment:
| Q |
30 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
129 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4344518 |
caacataagtgaacaaaaaatacaagcataattatcacacaacataagtcttcattaagggatagaaacattacataagttactagtacttcataagagt |
4344419 |
T |
|
| Q |
130 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
229 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
4344418 |
acttcatagttactaccacttcttagattacttcctaattgaaaggaaaaacataacaatacttcaaagttactggtacttcctagattacttcttaatt |
4344319 |
T |
|
| Q |
230 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag |
327 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| | || | |||||||||||||||||||||||||||||||| |
|
|
| T |
4344318 |
taaagacaacgaaacatta-aacattaaagactaaacataacagtacttcatagttactagtacttcgtagattacttcttaattcatagtacttcctag |
4344220 |
T |
|
| Q |
328 |
cttacttcc |
336 |
Q |
| |
|
|||| |||| |
|
|
| T |
4344219 |
cttaattcc |
4344211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 22808392 - 22808084
Alignment:
| Q |
30 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
22808392 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagtcttcattaagggataaaaaaattacataagttactagtacttcataagagt |
22808293 |
T |
|
| Q |
130 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
229 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||||||||||||| | |||| |||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22808292 |
acttcatggttactaccacttcttagattacttcctaattgaaaagaaaaatataatagtacttcatagttactagtacttcctagattacttcttaatt |
22808193 |
T |
|
| Q |
230 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag |
327 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| | || | ||||||||||||||||| |||||||||||||| |
|
|
| T |
22808192 |
taaagataacggaacattacaacattaaagactaaacataacaatacttcatagttactagtacttcatagattacttcttaatttatagtacttcctag |
22808093 |
T |
|
| Q |
328 |
cttacttcc |
336 |
Q |
| |
|
|||| |||| |
|
|
| T |
22808092 |
cttaattcc |
22808084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 30 - 323
Target Start/End: Original strand, 23362369 - 23362651
Alignment:
| Q |
30 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||| |
|
|
| T |
23362369 |
caacataagtgaaccaaaaatacgagcataattatcacacaacataagtcttcattaagggataaaaacattacataagttact-------------agt |
23362455 |
T |
|
| Q |
130 |
acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt |
229 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
23362456 |
acttcatggttactaccacttcttagattacttcctaattgaaaggaaaaacataacagtacttcatagttattagtacttcctagattacttcttaatt |
23362555 |
T |
|
| Q |
230 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttc |
323 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || | |||||||||||||||||||||||||||| |
|
|
| T |
23362556 |
taaagacaacggaacattacaacattaaagactaaacataacaatacttaatagttactagtacttcgtagattacttcttaattcatagtacttc |
23362651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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