View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6615_low_3 (Length: 363)

Name: NF6615_low_3
Description: NF6615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6615_low_3
NF6615_low_3
[»] chr4 (8 HSPs)
chr4 (5-331)||(22990246-22990574)
chr4 (5-331)||(22714651-22714979)
chr4 (5-331)||(28948908-28949236)
chr4 (30-336)||(22696864-22697172)
chr4 (30-351)||(46956533-46956859)
chr4 (277-351)||(28949216-28949290)
chr4 (277-351)||(22714959-22715033)
chr4 (277-351)||(22990192-22990266)
[»] scaffold0009 (2 HSPs)
scaffold0009 (5-331)||(200524-200862)
scaffold0009 (277-351)||(200842-200916)
[»] chr7 (1 HSPs)
chr7 (30-351)||(20087585-20087908)
[»] chr8 (1 HSPs)
chr8 (30-336)||(19646298-19646606)
[»] chr1 (1 HSPs)
chr1 (30-336)||(4344211-4344518)
[»] chr5 (1 HSPs)
chr5 (30-336)||(22808084-22808392)
[»] chr2 (1 HSPs)
chr2 (30-323)||(23362369-23362651)


Alignment Details
Target: chr4 (Bit Score: 250; Significance: 1e-139; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 5 - 331
Target Start/End: Complemental strand, 22990574 - 22990246
Alignment:
Q  5 gaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattaca 104  Q
    ||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22990574 gaacaacaaatccgaagcaaaaaaacaaaataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggatagaaacattaca 22990475  T
Q  105 taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22990474 taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag 22990375  T
Q  205 gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatag-tac--atcctagcttagatt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||  || ||  | ||||||    
T  22990374 gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactaatact-tcctagatt 22990276  T
Q  302 acttcttaattcatagtacttcctagctta 331  Q
    ||||||||||||||||||| ||||| ||||    
T  22990275 acttcttaattcatagtacatcctatctta 22990246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 5 - 331
Target Start/End: Original strand, 22714651 - 22714979
Alignment:
Q  5 gaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattaca 104  Q
    ||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22714651 gaacaacaaatccgaagcaaaaaaacaaaataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggatagaaacattaca 22714750  T
Q  105 taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22714751 taagttactggtacttcataagagtacttcatagttactagcactttttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag 22714850  T
Q  205 gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatag-tac--atcctagcttagatt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||  || ||  | ||||||    
T  22714851 gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactaatact-tcctagatt 22714949  T
Q  302 acttcttaattcatagtacttcctagctta 331  Q
    ||||||||||||||||||| ||||| ||||    
T  22714950 acttcttaattcatagtacatcctatctta 22714979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 5 - 331
Target Start/End: Original strand, 28948908 - 28949236
Alignment:
Q  5 gaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattaca 104  Q
    ||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28948908 gaacaacaaatccgaagcaaaaaaacaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggatagaaacattaca 28949007  T
Q  105 taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag 204  Q
    ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28949008 taagttatttgtacttcataagagtacttcatagttactagcactttttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacag 28949107  T
Q  205 gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagatta 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |  ||   | |||||||    
T  28949108 gtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactattacttcctagatta 28949207  T
Q  303 cttcttaattcatagtacttcctagctta 331  Q
    |||||||||||||||||| ||||||||||    
T  28949208 cttcttaattcatagtacatcctagctta 28949236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 22697172 - 22696864
Alignment:
Q  30 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 129  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  22697172 caacataagtgaaccataaatacgagcataattatcacacaacataagtcttcattaagggatagaaacattacataagttactagtacttcataagagt 22697073  T
Q  130 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 229  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  22697072 acttcatagttactaccacttcttagattacttcctaattgaaaggaaaaacataacagtacttcaaagttaccggtacttcctagattacttcttaatt 22696973  T
Q  230 taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag 327  Q
    |||||||||| || |||||||||||||||||||||||| || | |||||||||||   |  ||   | ||||||||||||||||||||||||||||||||    
T  22696972 taaagacaacagagcattacaacattaaagactaaacaaaatagtacttcatagttactagtacttcgtagattacttcttaattcatagtacttcctag 22696873  T
Q  328 cttacttcc 336  Q
     ||| ||||    
T  22696872 gttaattcc 22696864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 30 - 351
Target Start/End: Complemental strand, 46956859 - 46956533
Alignment:
Q  30 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 129  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||| |||    
T  46956859 caacataagtgaacaaaaaatacaagcataattatcacacaacataagccttcattaaggtatagaaacattacataagttactagtacttcataatagt 46956760  T
Q  130 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 229  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||    
T  46956759 acttcatagttactagcacttcttagattacttcctaattaaaaggcaaaacataacagtacttgatagttactagtacttcctagattacttcttaatt 46956660  T
Q  230 taaagacaacggaacattacaacattaaagacta---aacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcc 324  Q
    |||||| || ||||||||||||||||||||||||   || |||||| | |||||||||   |  ||   | ||||||||||||||||||||||||||| |    
T  46956659 taaagataatggaacattacaacattaaagactaaataatataacagtgcttcatagttactagtacttcctagattacttcttaattcatagtactttc 46956560  T
Q  325 tagcttacttcctagtcacacaggttc 351  Q
    |||||||||||||||||||||||||||    
T  46956559 tagcttacttcctagtcacacaggttc 46956533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 28949216 - 28949290
Alignment:
Q  277 ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc 351  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  28949216 ttcatagtacatcctagcttagattgcttcttaactcatagtacttcctagcttacttcctagtcacataggttc 28949290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 22714959 - 22715033
Alignment:
Q  277 ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc 351  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  22714959 ttcatagtacatcctatcttagattacttcttaattcatagtacttcctaacttacttcctaatcacagaggttc 22715033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 277 - 351
Target Start/End: Complemental strand, 22990266 - 22990192
Alignment:
Q  277 ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc 351  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  22990266 ttcatagtacatcctatcttagattacttcttaattcatagtacttcctaacttacttcctaatcacagaggttc 22990192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 220; Significance: 1e-121; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 5 - 331
Target Start/End: Original strand, 200524 - 200862
Alignment:
Q  5 gaacaacaaatccgaagcnnnnnnncaacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattaca 104  Q
    ||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  200524 gaacaacaaatccgaagcaaaaaaacaaaataagtgaaccaaaaatacgagcataattatcacacaacataagctttcattaagggatagaaacattaca 200623  T
Q  105 taagttactggtacttcataagagtacttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataac----------agtacttc 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||          ||||||||    
T  200624 taagttactggtacttcataagagtacttcatagttactagcacttcttagattaattcctaattgaaaggaaaaacataacagtacttcatagtacttc 200723  T
Q  195 atagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta-- 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |  ||      
T  200724 atagttacaggtacttcctagattacttcttaatttaaagacaacggaacattacaacattaaagactaaacataacagtacttcatagttactattact 200823  T
Q  293 gcttagattacttcttaattcatagtacttcctagctta 331  Q
     | ||||||||||||||||||||||||| ||||||||||    
T  200824 tcctagattacttcttaattcatagtacatcctagctta 200862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 200842 - 200916
Alignment:
Q  277 ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctagtcacacaggttc 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  200842 ttcatagtacatcctagcttagattacttcttaattcatagtacttcctagcttacttcctaatcacagaggttc 200916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 30 - 351
Target Start/End: Complemental strand, 20087908 - 20087585
Alignment:
Q  30 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 129  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| ||||||||||| |||    
T  20087908 caacataagtgaaccaaaaatacaagcataattatcacacaacataagtcttcattaagggatagaaacattacataagttactagtacttcataatagt 20087809  T
Q  130 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 229  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  20087808 acttcatagttactagtacttcttagattacttcctaattaaaaggcaaaacataacagtacttcatagttactagtactttctagattacttcttaatt 20087709  T
Q  230 taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag 327  Q
    |||||| ||||||||||||||||||||||||||||| |||||| |||||||||||   |  ||   | |||||||||||||||||||||  |||||||||    
T  20087708 taaagataacggaacattacaacattaaagactaaatataacagtacttcatagttactagtacttcctagattacttcttaattcataagacttcctag 20087609  T
Q  328 cttacttcctagtcacacaggttc 351  Q
    ||||||||||||||||||| ||||    
T  20087608 cttacttcctagtcacacaagttc 20087585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 19646606 - 19646298
Alignment:
Q  30 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 129  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  19646606 caacataagtgaaccaaaaatacaagcataattatcacacaacataagtcttcattaagggatagaaatattacataagttactggtacttcataagagt 19646507  T
Q  130 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 229  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  19646506 acttcatagttactaccacttcttagattacttcctaattgaaaggaaaaacataacaatacttcaaagttaccggtacttcctagattacttcttaatt 19646407  T
Q  230 taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag 327  Q
    |||||||||| |||||||||||||||||||| ||||||||| | |||||||||||   |  ||   | ||||||||||||||||||||||||||||||||    
T  19646406 taaagacaacagaacattacaacattaaagattaaacataagagtacttcatagttactagtacttcgtagattacttcttaattcatagtacttcctag 19646307  T
Q  328 cttacttcc 336  Q
    |||| ||||    
T  19646306 cttaattcc 19646298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 4344518 - 4344211
Alignment:
Q  30 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 129  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  4344518 caacataagtgaacaaaaaatacaagcataattatcacacaacataagtcttcattaagggatagaaacattacataagttactagtacttcataagagt 4344419  T
Q  130 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 229  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  4344418 acttcatagttactaccacttcttagattacttcctaattgaaaggaaaaacataacaatacttcaaagttactggtacttcctagattacttcttaatt 4344319  T
Q  230 taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag 327  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||   |  ||   | ||||||||||||||||||||||||||||||||    
T  4344318 taaagacaacgaaacatta-aacattaaagactaaacataacagtacttcatagttactagtacttcgtagattacttcttaattcatagtacttcctag 4344220  T
Q  328 cttacttcc 336  Q
    |||| ||||    
T  4344219 cttaattcc 4344211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 22808392 - 22808084
Alignment:
Q  30 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| ||| ||||||||||||||| |||||||||||||||    
T  22808392 caacataagtgaaccaaaaatacgagcataattatcacacaacataagtcttcattaagggataaaaaaattacataagttactagtacttcataagagt 22808293  T
Q  130 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 229  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| | |||| |||| ||||||||||||||||  |||||||||||||||||||||||||    
T  22808292 acttcatggttactaccacttcttagattacttcctaattgaaaagaaaaatataatagtacttcatagttactagtacttcctagattacttcttaatt 22808193  T
Q  230 taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttcctag 327  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |  ||   | ||||||||||||||||| ||||||||||||||    
T  22808192 taaagataacggaacattacaacattaaagactaaacataacaatacttcatagttactagtacttcatagattacttcttaatttatagtacttcctag 22808093  T
Q  328 cttacttcc 336  Q
    |||| ||||    
T  22808092 cttaattcc 22808084  T

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Target: chr2 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 30 - 323
Target Start/End: Original strand, 23362369 - 23362651
Alignment:
Q  30 caacataagtgaaccaaaaatacgagcataattatcacacaacataagctttcgttaagggatagaaacattacataagttactggtacttcataagagt 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||| |||||||||||||||||||             |||    
T  23362369 caacataagtgaaccaaaaatacgagcataattatcacacaacataagtcttcattaagggataaaaacattacataagttact-------------agt 23362455  T
Q  130 acttcatagttactagcacttcttagattacttcctaattgaaaggcaaaacataacagtacttcatagttacaggtacttcctagattacttcttaatt 229  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||    
T  23362456 acttcatggttactaccacttcttagattacttcctaattgaaaggaaaaacataacagtacttcatagttattagtacttcctagattacttcttaatt 23362555  T
Q  230 taaagacaacggaacattacaacattaaagactaaacataacaatacttcatagtacatccta--gcttagattacttcttaattcatagtacttc 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||   |  ||   | ||||||||||||||||||||||||||||    
T  23362556 taaagacaacggaacattacaacattaaagactaaacataacaatacttaatagttactagtacttcgtagattacttcttaattcatagtacttc 23362651  T

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