View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6616_high_8 (Length: 250)
Name: NF6616_high_8
Description: NF6616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6616_high_8 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 42237010 - 42237247
Alignment:
| Q |
13 |
aaaatatacgtggttaattaaattctaaaccccaaaccaggccacctcttgttactctccttctttgtcctctttgaatttggatcaataagattttcca |
112 |
Q |
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| T |
42237010 |
aaaaaatacgtggttaattaaattctaaaccccaaaccaggccacctcttgttactctccttctttgtcctctttgaatttggatcaataagattttcca |
42237109 |
T |
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| Q |
113 |
aagattttgcttttctgtctcttgtcttgccagcttctttcagcaactcagctaaacgacgcttctcatcttcaaaatcaggatttgctattccaagctt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42237110 |
aagattttgcttttctgtctcttgtcttgccagcttctttcagcaactcagctaaacgacgcttctcatcttcaaaatcaggatttgctattccaagctt |
42237209 |
T |
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| Q |
213 |
ctcttccctcaacttcagcacatattctacgatttcaa |
250 |
Q |
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||||||||||||||||||||||||||||| |||||||| |
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| T |
42237210 |
ctcttccctcaacttcagcacatattctaagatttcaa |
42237247 |
T |
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