View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6617_low_19 (Length: 245)
Name: NF6617_low_19
Description: NF6617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6617_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 3081226 - 3080995
Alignment:
| Q |
1 |
cttaatgcaccaaccacttcagcatggaatgggtttccatcaagtaacttctcggcaaagcaaccaatgaagtttgcattataacctctaaacattccat |
100 |
Q |
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| T |
3081226 |
cttaatgcaccaaccacttcagcatggaatgggtttccatcaagtaacttctcggcaaagcaaccaatgaagtttgcattataacctctaaacattccat |
3081127 |
T |
|
| Q |
101 |
gggctccaatggctgaaccatctgaattgaacttaatccaaccaggcatgggaggactcagaggacttctctgattattgaagccttaggaggcctaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
3081126 |
gggctccaatggctgaaccatctgaattgaacttaatccaaccaggcatgggaggactcagaggacttctctgattattgaagccttaggaggcctaact |
3081027 |
T |
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| Q |
201 |
aagcaattaaaattctttaggattgtaaaatc |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
3081026 |
aagcaattaaaattctttaggattgtaaaatc |
3080995 |
T |
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