View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6618_low_7 (Length: 244)
Name: NF6618_low_7
Description: NF6618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6618_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 228
Target Start/End: Complemental strand, 39111536 - 39111325
Alignment:
| Q |
17 |
aaaacaaatgcttattttgtactgatttttggaatgtggactgtggtatgttgaagtcattagagaatgagagacataggtttcagtttagtttacatta |
116 |
Q |
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| T |
39111536 |
aaaacaaatgcttattctgtactgatttttggaatgtggactgtggtatgttgaagtcattagagaatgagagacataggtttcagtttagtttacatta |
39111437 |
T |
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| Q |
117 |
atagaccaattgtcaaggaaatatgtcatgccatgcaaagaaattaatgtaaacttaattaaatttgatctcagagaaagattgaaaaggcatttatcac |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39111436 |
atagaccaattgtcaaggaaatatgtcatgccatgcaaagaaattaatgtaaacttaattaaatttgatctcagagaaagattgaaaaggcatttatcac |
39111337 |
T |
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| Q |
217 |
tatatttttaca |
228 |
Q |
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|||||||||||| |
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| T |
39111336 |
tatatttttaca |
39111325 |
T |
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