View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6619_high_23 (Length: 315)

Name: NF6619_high_23
Description: NF6619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6619_high_23
NF6619_high_23
[»] chr5 (17 HSPs)
chr5 (6-315)||(28889331-28889643)
chr5 (6-315)||(28896035-28896347)
chr5 (6-315)||(28924861-28925173)
chr5 (6-315)||(28909283-28909595)
chr5 (6-315)||(28945678-28945990)
chr5 (6-315)||(20819968-20820277)
chr5 (6-315)||(20827068-20827377)
chr5 (34-315)||(20772747-20773030)
chr5 (34-315)||(20781522-20781805)
chr5 (6-230)||(28931061-28931287)
chr5 (27-314)||(24929923-24930214)
chr5 (97-315)||(19236740-19236961)
chr5 (79-315)||(22460977-22461217)
chr5 (79-315)||(22467601-22467841)
chr5 (253-308)||(18407944-18408000)
chr5 (256-315)||(34830086-34830145)
chr5 (254-309)||(42961566-42961622)
[»] scaffold0131 (1 HSPs)
scaffold0131 (6-315)||(747-1058)
[»] scaffold1469 (1 HSPs)
scaffold1469 (34-315)||(1134-1416)
[»] chr7 (10 HSPs)
chr7 (102-315)||(2465208-2465422)
chr7 (102-315)||(3857359-3857574)
chr7 (6-315)||(16090822-16091136)
chr7 (6-315)||(29181103-29181417)
chr7 (34-315)||(20906455-20906738)
chr7 (14-215)||(2966720-2966925)
chr7 (210-315)||(2971209-2971315)
chr7 (257-315)||(31155396-31155455)
chr7 (255-315)||(14319623-14319684)
chr7 (254-314)||(14567203-14567264)
[»] scaffold0029 (2 HSPs)
scaffold0029 (34-315)||(91196-91481)
scaffold0029 (34-315)||(96922-97207)
[»] chr6 (9 HSPs)
chr6 (27-315)||(9099065-9099357)
chr6 (34-315)||(21364476-21364757)
chr6 (34-315)||(23968458-23968739)
chr6 (79-315)||(20007940-20008181)
chr6 (109-180)||(29097719-29097790)
chr6 (257-315)||(15458492-15458551)
chr6 (257-315)||(15465087-15465146)
chr6 (257-315)||(11288662-11288721)
chr6 (255-315)||(31252423-31252484)
[»] chr3 (12 HSPs)
chr3 (27-315)||(19235062-19235354)
chr3 (34-315)||(12033438-12033723)
chr3 (6-315)||(14865593-14865907)
chr3 (34-315)||(17131508-17131793)
chr3 (253-314)||(23370500-23370562)
chr3 (255-315)||(51301589-51301650)
chr3 (255-314)||(13302235-13302295)
chr3 (255-314)||(13323782-13323842)
chr3 (257-315)||(10389437-10389496)
chr3 (257-315)||(10414526-10414585)
chr3 (257-315)||(10421196-10421255)
chr3 (255-314)||(13312891-13312951)
[»] scaffold0053 (1 HSPs)
scaffold0053 (6-315)||(79484-79798)
[»] chr4 (2 HSPs)
chr4 (6-315)||(16146824-16147138)
chr4 (255-315)||(27906266-27906327)
[»] chr1 (4 HSPs)
chr1 (34-315)||(21710595-21710879)
chr1 (79-315)||(20851126-20851366)
chr1 (79-315)||(20857753-20857993)
chr1 (79-315)||(21706097-21706337)
[»] scaffold0072 (1 HSPs)
scaffold0072 (34-315)||(49964-50250)
[»] scaffold0384 (1 HSPs)
scaffold0384 (108-314)||(16059-16266)
[»] chr8 (4 HSPs)
chr8 (79-315)||(24320664-24320904)
chr8 (253-314)||(44477621-44477683)
chr8 (253-314)||(44492779-44492841)
chr8 (254-309)||(27940851-27940907)
[»] chr2 (4 HSPs)
chr2 (79-315)||(25180923-25181163)
chr2 (79-313)||(10398-10636)
chr2 (255-315)||(26885183-26885243)
chr2 (255-315)||(27207713-27207774)
[»] scaffold0023 (1 HSPs)
scaffold0023 (34-315)||(135216-135499)
[»] scaffold0348 (1 HSPs)
scaffold0348 (34-314)||(9113-9396)
[»] scaffold1318 (1 HSPs)
scaffold1318 (195-315)||(1906-2027)
[»] scaffold0099 (1 HSPs)
scaffold0099 (133-307)||(12832-13019)
[»] scaffold0609 (1 HSPs)
scaffold0609 (255-315)||(5851-5912)
[»] scaffold0249 (1 HSPs)
scaffold0249 (257-315)||(13888-13947)
[»] scaffold0183 (1 HSPs)
scaffold0183 (257-315)||(6-65)
[»] scaffold0553 (1 HSPs)
scaffold0553 (253-314)||(10190-10252)
[»] scaffold0544 (1 HSPs)
scaffold0544 (253-314)||(1520-1582)
[»] scaffold0127 (1 HSPs)
scaffold0127 (255-314)||(10239-10299)
[»] scaffold0026 (1 HSPs)
scaffold0026 (253-315)||(111684-111747)
[»] scaffold0815 (1 HSPs)
scaffold0815 (194-231)||(1388-1425)
[»] scaffold0261 (1 HSPs)
scaffold0261 (255-315)||(23563-23624)


Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 6 - 315
Target Start/End: Complemental strand, 28889643 - 28889331
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    ||||||| |||||||||||||||  |||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||||||||| |||||    
T  28889643 gacatcaacaggaacagcaactaaacattaacaacaacaatccagcccaatcaggcattcatacagaaaatcccaaattcatacataacatgctcttttc 28889544  T
Q  105 atccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatca 204  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||||||| || |||||||||||||||||||    
T  28889543 atccaattatgatcaacaacagcgatacagattaggaaatcatactaatcattaaatacaacgtcataaacctgaattttacgcattttcttcaaaatca 28889444  T
Q  205 tcattaaccctaattttcccaa-ttttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccaccctt 302  Q
    |||| || |||||||||||||| ||||||| |||||||| ||||||   | ||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  28889443 tcatcaaacctaattttcccaatttttaccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccaccctt 28889344  T
Q  303 accttagaattgc 315  Q
    |||||||||||||    
T  28889343 accttagaattgc 28889331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 6 - 315
Target Start/End: Complemental strand, 28896347 - 28896035
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    ||||||| |||||||||||||||  |||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||||||||| |||||    
T  28896347 gacatcaacaggaacagcaactaaacattaacaacaacaatccagcccaatcaggcattcatacagaaaatcccaaattcatacataacatgctcttttc 28896248  T
Q  105 atccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatca 204  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||||||| || |||||||||||||||||||    
T  28896247 atccaattatgatcaacaacagcgatacagattaggaaatcatactaatcattaaatacaacgtcataaacctgaattttacgcattttcttcaaaatca 28896148  T
Q  205 tcattaaccctaattttcccaa-ttttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccaccctt 302  Q
    |||| || |||||||||||||| ||||||| |||||||| ||||||   | ||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  28896147 tcatcaaacctaattttcccaatttttaccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccaccctt 28896048  T
Q  303 accttagaattgc 315  Q
    |||||||||||||    
T  28896047 accttagaattgc 28896035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 6 - 315
Target Start/End: Complemental strand, 28925173 - 28924861
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    ||||||| |||||||||||||||  |||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||||||||| |||||    
T  28925173 gacatcaacaggaacagcaactaaacattaacaacaacaatccagcccaatcaggcattcatacagaaaatcccaaattcatacataacatgctcttttc 28925074  T
Q  105 atccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatca 204  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||||||| || |||||||||||||||||||    
T  28925073 atccaattatgatcaacaacagcgatacagattaggaaatcatactaatcattaaatacaacgtcataaacctgaattttacgcattttcttcaaaatca 28924974  T
Q  205 tcattaaccctaattttcccaa-ttttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccaccctt 302  Q
    |||| || |||||||||||||| ||||||| |||||||| ||||||   | ||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  28924973 tcatcaaacctaattttcccaatttttaccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccaccctt 28924874  T
Q  303 accttagaattgc 315  Q
    |||||||||||||    
T  28924873 accttagaattgc 28924861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 6 - 315
Target Start/End: Complemental strand, 28909595 - 28909283
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    ||||||| |||||||| ||||||  |||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||||||||| |||||    
T  28909595 gacatcaacaggaacaacaactaaacattaacaacaacaatccagcccaatcaggcattcatacagaaaatcccaaattcatacataacatgctcttttc 28909496  T
Q  105 atccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatca 204  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||||||| || |||||||||||||||||||    
T  28909495 atccaattatgatcaacaacagcgatacagattaggaaatcatactaatcattaaatacaacgtcataaacctgaattttacgcattttcttcaaaatca 28909396  T
Q  205 tcattaaccctaattttcccaa-ttttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccaccctt 302  Q
    |||| || |||||||||||||| ||||||| |||||||| ||||||   | ||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  28909395 tcatcaaacctaattttcccaatttttaccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccaccctt 28909296  T
Q  303 accttagaattgc 315  Q
    |||||||||||||    
T  28909295 accttagaattgc 28909283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 6 - 315
Target Start/End: Complemental strand, 28945990 - 28945678
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    ||||||| |||||||| ||||||  |||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||||||||| |||||    
T  28945990 gacatcaacaggaacaacaactaaacattaacaacaacaatccagcccaatcaggcattcatacagaaaatcccaaattcatacataacatgctcttttc 28945891  T
Q  105 atccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatca 204  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||||||| || |||||||||||||||||||    
T  28945890 atccaattatgatcaacaacagcgatacagattaggaaatcatactaatcattaaatacaacgtcataaacctgaattttacgcattttcttcaaaatca 28945791  T
Q  205 tcattaaccctaattttcccaa-ttttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccaccctt 302  Q
    |||| || |||||||||||||| ||||||| |||||||| ||||||   | ||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  28945790 tcatcaaacctaattttcccaatttttaccttaagaacaattaaatagtttaattttcagaaatcatataatatcactattgaaagatgatcccaccctt 28945691  T
Q  303 accttagaattgc 315  Q
    |||||||||||||    
T  28945690 accttagaattgc 28945678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 6 - 315
Target Start/End: Original strand, 20819968 - 20820277
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    ||||||| |||||||||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  20819968 gacatcaacaggaacagcaactaaacataaacaacaacaatttagcccaatcaagcattcatacagaaaattccaaattcatacataacatgctatttgc 20820067  T
Q  105 atccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatca 204  Q
    ||||||||||||||||| ||| ||||||  ||||||  |||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  20820068 atccaattatgatcaactacaacaatactaattagg-gatcatactcatcatcaaatacaacattataaacctgaatcttatgcattctcttcaaaatca 20820166  T
Q  205 tcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccaccctta 303  Q
    ||||||||||||||||| ||||||||||| ||||||| ||| ||||||| |||  |||||||| |||||||| || ||||| ||||||||||||||||||    
T  20820167 tcattaaccctaatttt-ccaattttaccttaagaacggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccaccctta 20820265  T
Q  304 ccttagaattgc 315  Q
    ||||||||||||    
T  20820266 ccttagaattgc 20820277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 6 - 315
Target Start/End: Original strand, 20827068 - 20827377
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    ||||||| |||||||||||||||  ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  20827068 gacatcaacaggaacagcaactaaacataaacaacaacaatttagcccaatcaagcattcatacagaaaattccaaattcatacataacatgctatttgc 20827167  T
Q  105 atccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatca 204  Q
    ||||||||||||||||| ||| ||||||  ||||||  |||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  20827168 atccaattatgatcaactacaacaatactaattagg-gatcatactcatcatcaaatacaacattataaacctgaatcttatgcattctcttcaaaatca 20827266  T
Q  205 tcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccaccctta 303  Q
    ||||||||||||||||| ||||||||||| ||||||| ||| ||||||| |||  |||||||| |||||||| || ||||| ||||||||||||||||||    
T  20827267 tcattaaccctaatttt-ccaattttaccttaagaacggttgaattacttaatcatcagaaattatatattaacactattgaaagatgatcccaccctta 20827365  T
Q  304 ccttagaattgc 315  Q
    ||||||||||||    
T  20827366 ccttagaattgc 20827377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 34 - 315
Target Start/End: Original strand, 20772747 - 20773030
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaa--ttcatacataacatgctattttcatccaattatgatcaacaacagcaata 131  Q
    ||||||||||||| |  |||||||| |||||||  ||||  |||||||  ||||| ||| | || ||| |||||||||||||||||||||| || |||||    
T  20772747 aacaacaacaattaactccaatcaaacattcattcagaac-ttccaaaacttcatccattatattctactttcatccaattatgatcaacatcaacaata 20772845  T
Q  132 cagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatcatcattaaccctaattttcccaatttta 231  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  20772846 tagagtaggaaatcatactaatcatcaaatacaacattataaacctgattcttacacattttcttcaaaatcatcattaaccctaaatttcccaatttta 20772945  T
Q  232 ccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    || ||||||||||||||||  | ||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  20772946 ccttaagaacagttaaattgattaattttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgc 20773030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 34 - 315
Target Start/End: Original strand, 20781522 - 20781805
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaa--ttcatacataacatgctattttcatccaattatgatcaacaacagcaata 131  Q
    ||||||||||||| |  |||||||| |||||||  ||||  |||||||  ||||| ||| | || ||| |||||||||||||||||||||| || |||||    
T  20781522 aacaacaacaattaactccaatcaaacattcattcagaac-ttccaaaacttcatccattatattctactttcatccaattatgatcaacatcaacaata 20781620  T
Q  132 cagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatcatcattaaccctaattttcccaatttta 231  Q
     ||| |||||||||||| |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| |||||||||||||    
T  20781621 tagagtaggaaatcataataatcatcaaatacaacattataaacctgattcttacacattttcttcaaaatcatcattaaccctaaatttcccaatttta 20781720  T
Q  232 ccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    || ||||||||||||||||  | ||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  20781721 ccttaagaacagttaaattgattaattttcagaaatcatatattataattattgaaagataatcccacccttaccttagaattgc 20781805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 6 - 230
Target Start/End: Complemental strand, 28931287 - 28931061
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    ||||||| |||||||||||||||  |||||||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||||||||||| |||||    
T  28931287 gacatcaacaggaacagcaactaaacattaacaacaacaatccagcccaatcaggcattcatacagaaaatcccaaattcatacataacatgctcttttc 28931188  T
Q  105 atccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttc-aaaatc 203  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||||||| || | |||||||||| |||| |    
T  28931187 atccaattatgatcaacaacagcgatacagattaggaaatcatactaatcattaaatacaacgtcataaacctgaattttacccattttcttcaaaaacc 28931088  T
Q  204 atcattaaccctaattttcccaatttt 230  Q
    ||||| || ||||||||||||||||||    
T  28931087 atcatcaaacctaattttcccaatttt 28931061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 27 - 314
Target Start/End: Complemental strand, 24930214 - 24929923
Alignment:
Q  27 tagcattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaa-attcatacataacatgctattttca-tccaa-ttatgatcaacaa 123  Q
    |||||| ||||||||||||| |  |||||||| |||||||  ||||  |||||| ||||||  || | || ||||||||| ||||| |||||||||| |     
T  24930214 tagcatcaacaacaacaattaactccaatcaaacattcattcagaac-ttccaacattcatctatcatattctattttcactccaaattatgatcaatat 24930116  T
Q  124 cagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatcatcattaaccctaattttcc 223  Q
    || || || ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| ||||| |||||||||||||||||| |||||    
T  24930115 caacattatagattaggaaatcatactaatcatcaaatacaacattataaacctgattcttacacatttccttcagaatcatcattaaccctaaatttcc 24930016  T
Q  224 caattttaccataagaacagttaaatt-actcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattg 314  Q
    |||||||||| |||||||||||||||| | | | |||| |||||||||||||||  | ||||| ||||| |||||||||||||||||||||||    
T  24930015 caattttaccttaagaacagttaaattgattaattttttagaaatcatatattagaactattgaaagataatcccacccttaccttagaattg 24929923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 97 - 315
Target Start/End: Original strand, 19236740 - 19236961
Alignment:
Q  97 ctattttcat-ccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaa-tacaacattataaacctgaatcttgcgcattttc 194  Q
    |||||||||| ||||||| ||||| || || ||| | |||||| |||  |||||||| | ||||| ||||||| |||||||||||  |||   | |||||    
T  19236740 ctattttcattccaattacgatcagcatcaacaacatagattaagaacacatactaaac-tcaaagtacaacaatataaacctgatccttataccttttc 19236838  T
Q  195 tt-caaaatcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatga 292  Q
    || |||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||  | ||||||||||||| ||||||||| | ||||| ||||| |    
T  19236839 tttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataa 19236938  T
Q  293 tcccacccttaccttagaattgc 315  Q
    |||||||||||||||||||||||    
T  19236939 tcccacccttaccttagaattgc 19236961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 79 - 315
Target Start/End: Original strand, 22460977 - 22461217
Alignment:
Q  79 aaattcatacataacatgctattttcat-ccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaa-tacaacattataaacc 176  Q
    |||||||| ||| | || |||||||||| ||||||| ||||| || || ||| | ||| || |||| |||||||| ||||||| ||| ||| ||||||||    
T  22460977 aaattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacc 22461076  T
Q  177 tgaatcttgcgcattttcttcaaaatcatcattaaccctaattttcccaattttaccataagaacagttaaatt-actcaattttcagaaatcatatatt 275  Q
    |||  |||   | |||||||  |||||||| |||||||||| ||||||||||||||| ||||||||||| |||| | | | ||||||||||| |||||||    
T  22461077 tgatccttataccttttctttcaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatatt 22461176  T
Q  276 atcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    || | ||||| ||||| ||||||||||||||||||||||||    
T  22461177 atgactattgaaagataatcccacccttaccttagaattgc 22461217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 79 - 315
Target Start/End: Original strand, 22467601 - 22467841
Alignment:
Q  79 aaattcatacataacatgctattttcat-ccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaa-tacaacattataaacc 176  Q
    |||||||| ||| | || |||||||||| ||||||| ||||| || || ||| | ||| || |||| |||||||| ||||||| ||| ||| ||||||||    
T  22467601 aaattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagaataagaaaacatactaaacatcaaagtacgacaatataaacc 22467700  T
Q  177 tgaatcttgcgcattttcttcaaaatcatcattaaccctaattttcccaattttaccataagaacagttaaatt-actcaattttcagaaatcatatatt 275  Q
    |||  |||   | |||||||  |||||||| |||||||||| ||||||||||||||| ||||||||||| |||| | | | ||||||||||| |||||||    
T  22467701 tgatccttataccttttctttcaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaatttttcagaaattatatatt 22467800  T
Q  276 atcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    || | ||||| ||||| ||||||||||||||||||||||||    
T  22467801 atgactattgaaagataatcccacccttaccttagaattgc 22467841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 18408000 - 18407944
Alignment:
Q  253 tcaattttcagaaatcatatattatcattattga-agatgatcccacccttacctta 308  Q
    ||||||||||||||| ||||||||| |||||||| ||||  || |||||||||||||    
T  18408000 tcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 315
Target Start/End: Original strand, 34830086 - 34830145
Alignment:
Q  256 attttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    |||||||||||| ||| ||||  ||||||||| ||| ||||||||||||||||||||||||    
T  34830086 attttcagaaattatacattaa-attattgaaagataatcccacccttaccttagaattgc 34830145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 309
Target Start/End: Original strand, 42961566 - 42961622
Alignment:
Q  254 caattttcagaaatcatatattatcattattgaagatgatcc-cacccttaccttag 309  Q
    |||||||||||||||||||||||| || ||||||| | | || ||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttag 42961622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 6 - 315
Target Start/End: Original strand, 747 - 1058
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    ||||||| |||||||||||||||  ||| |||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  747 gacatcaacaggaacagcaactaaacataaacaacaacaatccagcccaatcaagcattaatacagaaaatcccaaattcatacataacatgctattttc 846  T
Q  105 atccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatca 204  Q
    ||||||||||||||||||||| || || ||||  | || || |||||||||||||| ||||| |||||||||| |||||| | ||||||||||||||||     
T  847 atccaattatgatcaacaacaacattatagatcggaaactcttactaatcatcaaacacaactttataaacctaaatcttacacattttcttcaaaatcg 946  T
Q  205 tcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattga-agatgatcccaccctta 303  Q
     ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  947 ccattaaccctaattttcccaattttaccataagaacagttaaattgcttaattttcagaaatcatatattatcactattgagagatgatcccaccctta 1046  T
Q  304 ccttagaattgc 315  Q
    ||||||||||||    
T  1047 ccttagaattgc 1058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1469 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold1469
Description:

Target: scaffold1469; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 34 - 315
Target Start/End: Original strand, 1134 - 1416
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttcatccaattatgatcaacaacagcaataca 133  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  1134 aacaacaacaattcagcccaatcaagcattcatacagaaacttccaaattcacacataacatgctattttcatccaattatgatcaacaacaacaataca 1233  T
Q  134 gattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatcatcattaaccctaattttcccaattttacc 233  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  1234 gattaggaaatcatactaatcatcaattataacattgtaaacctgaatcttacgcattttcttcaaaatcatcattagacctaattttcccaattttacc 1333  T
Q  234 ataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
     ||||||||||||||||  | |||||||||||| ||||||||| || ||||| |||   ||||||||||||||||||||||||    
T  1334 ttaagaacagttaaattgtttaattttcagaaagcatatattaacactattgaaaggaaatcccacccttaccttagaattgc 1416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 1e-72; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 102 - 315
Target Start/End: Original strand, 2465208 - 2465422
Alignment:
Q  102 ttcatccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaa 201  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||| |||||||||||||| |||||| | ||||||||||||||    
T  2465208 ttcatccaattatgatcaacatcaacaatacagagtaggaaatcatattaatcatcaaatataacattataaacctaaatcttacacattttcttcaaaa 2465307  T
Q  202 tcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattgaa-gatgatcccaccc 300  Q
    |   ||||||||||||||| || | ||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||    
T  2465308 ttgccattaaccctaatttcccaatttttaccataaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaggatgatcccaccc 2465407  T
Q  301 ttaccttagaattgc 315  Q
    |||||||||||||||    
T  2465408 ttaccttagaattgc 2465422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 102 - 315
Target Start/End: Complemental strand, 3857574 - 3857359
Alignment:
Q  102 ttcatccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaa 201  Q
    ||||||||||||| ||||||| || ||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| | ||||||||||||||    
T  3857574 ttcatccaattataatcaacatcaacaatacagagtaggaaatcatattaatcatcaaatacaacattataaacctaaatcttacacattttcttcaaaa 3857475  T
Q  202 tcatcattaaccctaattttcccaatttt---accataagaacagttaaattactcaattttcagaaatcatatattatcattattgaagatgatcccac 298  Q
    |   ||||||||||||||| |||||||||   ||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  3857474 ttgccattaaccctaattt-cccaatttttttaccataaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaagatgatcccac 3857376  T
Q  299 ccttaccttagaattgc 315  Q
    |||||||||||||||||    
T  3857375 ccttaccttagaattgc 3857359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 6 - 315
Target Start/End: Original strand, 16090822 - 16091136
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    |||||||  ||||||||||||||  ||| ||||||| |||||||||||||||||||||||||  ||||  | | |||||||| ||| | || ||||||||    
T  16090822 gacatcaaaaggaacagcaactaaacatcaacaacatcaattcagcccaatcaagcattcattcagaacttccaaaattcatccatcatattctattttc 16090921  T
Q  105 atc-caattatgatcaacaacagcaatacagattaggaaatcatactaatcat-caaatacaacattataaacctgaatcttgcgcattttctt-caaaa 201  Q
    ||  |||||| |||||| | || ||| |  ||||| ||||||||||||||||| ||||||||||||||||||||||| |||| | | ||||||| |||||    
T  16090922 atttcaattacgatcaatatcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaa 16091021  T
Q  202 tcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccaccc 300  Q
    |||||||||||||| ||||||||||||||||| || |||||||| ||||  | || |||||||||| | ||||||| | ||||| ||||| |||||||||    
T  16091022 tcatcattaacccttattttcccaattttaccttaggaacagtttaattgattaactttcagaaattacatattatgactattgaaagataatcccaccc 16091121  T
Q  301 ttaccttagaattgc 315  Q
    |||||||||||||||    
T  16091122 ttaccttagaattgc 16091136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 6 - 315
Target Start/End: Complemental strand, 29181417 - 29181103
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    |||||||  ||||||||||||||  ||| ||||||| |||||||||||||||||||||||||| ||||  | | |||||||| ||| | || ||||||||    
T  29181417 gacatcaaaaggaacagcaactaaacatcaacaacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttc 29181318  T
Q  105 atc-caattatgatcaacaacagcaatacagattaggaaatcatactaatcat-caaatacaacattataaacctgaatcttgcgcattttctt-caaaa 201  Q
    ||  |||||| |||||| | || ||| |  ||||| ||||||||||||||||| ||||||||||||||||| ||||| |||| | | ||||||| |||||    
T  29181317 atttcaattacgatcaatatcaacaacatggattaagaaatcatactaatcattcaaatacaacattataagcctgattcttacaccttttctttcaaaa 29181218  T
Q  202 tcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccaccc 300  Q
    |||||||||||||| ||||||| ||||||||| |||||| |||| ||||  | ||||||||||||| | ||||||| | ||||| ||||| |||||||||    
T  29181217 tcatcattaacccttattttccaaattttaccttaagaatagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccaccc 29181118  T
Q  301 ttaccttagaattgc 315  Q
    |||||||||||||||    
T  29181117 ttaccttagaattgc 29181103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 34 - 315
Target Start/End: Complemental strand, 20906738 - 20906455
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttcatc-caattatgatcaacaacagcaatac 132  Q
    |||||||||||||||||||| |||||||||| || | ||| |||  ||||||| ||| | || ||||||||||  |||||| |||||||| || ||| |     
T  20906738 aacaacaacaattcagcccattcaagcattcttaca-aaacttctcaattcatccatcatattctattttcatttcaattacgatcaacatcaacaacat 20906640  T
Q  133 agattaggaaatcatactaatcatcaaa-tacaacattataaacctgaatcttgcgcattttctt-caaaatcatcattaaccctaattttcccaatttt 230  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||| ||| ||||   | ||||||| ||||||||||||||||||| | || |||||||||    
T  20906639 agattaagaaatcatactaaacatcaaagtacaacattataaacttgattcttataccttttctttcaaaatcatcattaacccttaatt-cccaatttt 20906541  T
Q  231 accataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    ||| |||||| |||| ||||  | ||||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  20906540 accttaagaatagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgc 20906455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 215
Target Start/End: Original strand, 2966720 - 2966925
Alignment:
Q  14 caggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattcc-aaattcatacataacatgctattttca-tccaa 110  Q
    ||||||||| |||||  ||| |||||||||||||||||||| ||||||||||||| | ||| |||| |||||||| ||| | || ||||||||| |||||    
T  2966720 caggaacagaaactaaacatcaacaacaacaattcagcccattcaagcattcataca-aaacttccaaaattcatccatcatattctattttcattccaa 2966818  T
Q  111 ttatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaa-tacaacattataaacctgaatcttgcgcattttc-ttcaaaatcatcat 208  Q
    ||| |||||||| || ||| |  ||||| ||||||||||||||||||||| |||||||||| |||||||| ||||   | ||||| ||||||| ||||||    
T  2966819 ttacgatcaacatcaacaacatggattaagaaatcatactaatcatcaaagtacaacattaaaaacctgattcttataccttttctttcaaaaacatcat 2966918  T
Q  209 taaccct 215  Q
    |||||||    
T  2966919 taaccct 2966925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 2971209 - 2971315
Alignment:
Q  210 aaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttacctta 308  Q
    |||||| || |||||||||||||| ||||||||||| ||||  | ||||||||||||| ||| ||||| | ||||| ||||| |||||||||||||||||    
T  2971209 aacccttatcttcccaattttaccttaagaacagttcaattgattaattttcagaaattataaattatgactattgaaagataatcccacccttacctta 2971308  T
Q  309 gaattgc 315  Q
    |||||||    
T  2971309 gaattgc 2971315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 31155396 - 31155455
Alignment:
Q  257 ttttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||| ||||||||| || |||||| ||| ||||||||||||||||||||||||    
T  31155396 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgc 31155455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 14319684 - 14319623
Alignment:
Q  255 aattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||||| ||| ||||  || |||||| ||| ||||||||||||||||||||||||    
T  14319684 aattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgc 14319623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 14567203 - 14567264
Alignment:
Q  254 caattttcagaaatcatatattatcattattgaagatgatcc-cacccttaccttagaattg 314  Q
    ||||||||||||| |||||||||| || ||||||| | | || |||||||||||||||||||    
T  14567203 caattttcagaaaccatatattataatcattgaaggttagcctcacccttaccttagaattg 14567264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 137; Significance: 2e-71; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 34 - 315
Target Start/End: Complemental strand, 91481 - 91196
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaa-ttcatacataacatgctattttcatccaattatgatcaacaacagcaatac 132  Q
    |||||||||||||||  | |||||| |||||||  ||||  ||| ||| ||||| ||| | || |||  ||||||||||||||||||||| || ||||||    
T  91481 aacaacaacaattcattcaaatcaaacattcattcagaactttcaaaacttcatccattatattctaccttcatccaattatgatcaacatcaccaatac 91382  T
Q  133 agattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatcatcattaaccctaattttcccaa---ttt 229  Q
    ||| |||||||||||| |||||||||||||||||||||||||||| |||||| | |||||||||||||||   |||||||||||| ||||||||   |||    
T  91381 agagtaggaaatcatattaatcatcaaatacaacattataaacctaaatcttacacattttcttcaaaattgccattaaccctaa-tttcccaatttttt 91283  T
Q  230 taccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  91282 taccataaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgc 91196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 34 - 315
Target Start/End: Complemental strand, 97207 - 96922
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaa-ttcatacataacatgctattttcatccaattatgatcaacaacagcaatac 132  Q
    |||||||||||||||  | |||||| |||||||  ||||  ||| ||| ||||| ||| | || |||  ||||||||||||||||||||| || ||||||    
T  97207 aacaacaacaattcattcaaatcaaacattcattcagaactttcaaaacttcatccattatattctaccttcatccaattatgatcaacatcaccaatac 97108  T
Q  133 agattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatcatcattaaccctaattttcccaa---ttt 229  Q
    ||| |||||||||||| |||||||||||||||||||||||||||| |||||| | |||||||||||||||   |||||||||||| ||||||||   |||    
T  97107 agagtaggaaatcatattaatcatcaaatacaacattataaacctaaatcttacacattttcttcaaaattgccattaaccctaa-tttcccaatttttt 97009  T
Q  230 taccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  97008 taccataaaaacagttaaattgcttaattttcagaaatcatatattatcattattgaaagatgatcccacccttaccttagaattgc 96922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 4e-69; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 27 - 315
Target Start/End: Complemental strand, 9099357 - 9099065
Alignment:
Q  27 tagcattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttca-tcc-aattatgatcaacaac 124  Q
    |||||| ||||||||||||| |  |||||||| |||||||  ||||  | | ||||||||  || | || ||||||||| ||| |||||||||||| | |    
T  9099357 tagcatcaacaacaacaattaactccaatcaaacattcattcagaacttccaaaattcatctatcatattctattttcactccaaattatgatcaatatc 9099258  T
Q  125 agcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatcatcattaaccctaattttccc 224  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||| |||||||||||||||||| ||||||    
T  9099257 aacaatatagattaggaaatcatactaatcatcaaatacaacattataaacctgattcttacacattttcttcagaatcatcattaaccctaaatttccc 9099158  T
Q  225 aattttaccataagaacagttaaatt-actcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    ||||||||| |||||||||||||||| | | | ||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  9099157 aattttaccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgc 9099065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 34 - 315
Target Start/End: Complemental strand, 21364757 - 21364476
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaa-ttcatacataacatgctattttcatccaattatgatcaacaacagcaatac 132  Q
    |||||||||||||||  | |||||| |||||||  ||||  ||| ||| ||||| ||| | || |||  ||||||||||||||||||||| || ||||||    
T  21364757 aacaacaacaattcattcaaatcaaacattcattcagaactttcaaaacttcatccattatattctaccttcatccaattatgatcaacatcaacaatac 21364658  T
Q  133 agattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatcatcattaaccctaattttcccaattttac 232  Q
    ||| |||||||||||| |||||||||||||||||||||||||||| | |||| |  |||||||||||||    |||||||||||| ||||||||||||||    
T  21364657 agagtaggaaatcatattaatcatcaaatacaacattataaacctaagtcttacatattttcttcaaaaatgccattaaccctaa-tttcccaattttac 21364559  T
Q  233 cataagaacagttaaattactcaattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||| |||||||||||| || |||||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||    
T  21364558 cataa-aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgc 21364476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 34 - 315
Target Start/End: Complemental strand, 23968739 - 23968458
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaa-ttcatacataacatgctattttcatccaattatgatcaacaacagcaatac 132  Q
    |||||||||||||||  | |||||| |||||||  ||||  ||| ||| ||||| ||| | || |||  ||||||||||||||||||||| || ||||||    
T  23968739 aacaacaacaattcattcaaatcaaacattcattcagaactttcaaaacttcatccattatattctaccttcatccaattatgatcaacatcaacaatac 23968640  T
Q  133 agattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatcatcattaaccctaattttcccaattttac 232  Q
    ||| |||||||||||| |||||||||||||||||||||||||||| | |||| |  |||||||||||||    |||||||||||| ||||||||||||||    
T  23968639 agagtaggaaatcatattaatcatcaaatacaacattataaacctaagtcttacatattttcttcaaaaatgccattaaccctaa-tttcccaattttac 23968541  T
Q  233 cataagaacagttaaattactcaattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||| |||||||||||| || |||||||||||||||||||||||||||| |||| ||| |||||||||||||||| |||||||    
T  23968540 cataa-aacagttaaattgcttaattttcagaaatcatatattatcattactgaaggataatcccacccttacctttgaattgc 23968458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 315
Target Start/End: Complemental strand, 20008181 - 20007940
Alignment:
Q  79 aaattcatacataacatgctattttcat-ccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaa-tacaacattataaacc 176  Q
    |||||||| ||| | || |||||||||| ||||||| ||||| || || ||||| |||||| |||| |||||||| ||||||| ||||||| ||||||||    
T  20008181 aaattcattcatcatattctattttcattccaattacgatcagcatcaacaatatagattaagaaaacatactaaacatcaaagtacaacaatataaacc 20008082  T
Q  177 tgaatcttgcgcattttctt-caaaatcatcattaaccctaattttcccaattttaccataagaacagttaaatt-actcaattttcagaaatcatatat 274  Q
    |||  |||   | ||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||||| |||| | | | |||||| |||| ||||||    
T  20008081 tgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaatttttcataaattatatat 20007982  T
Q  275 tatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    ||| | ||||| ||||||||||||||||||||||||||||||    
T  20007981 tatgactattgaaagatgatcccacccttaccttagaattgc 20007940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 180
Target Start/End: Original strand, 29097719 - 29097790
Alignment:
Q  109 aattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaa 180  Q
    |||||||||||| | || || || ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29097719 aattatgatcaatatcaacattatagattaggaaatcatactaatcatcaaatacaacagtataaacctgaa 29097790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 15458492 - 15458551
Alignment:
Q  257 ttttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||| ||||||||| || |||||| ||| ||||||||||||||||||||||||    
T  15458492 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgc 15458551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 15465087 - 15465146
Alignment:
Q  257 ttttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||| ||||||||| || |||||| ||| ||||||||||||||||||||||||    
T  15465087 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgc 15465146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 11288721 - 11288662
Alignment:
Q  257 ttttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||| ||||||||  || |||||| ||| ||||||||||||||||||||||||    
T  11288721 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagaattgc 11288662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 31252423 - 31252484
Alignment:
Q  255 aattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||||| ||||||||| || ||| || ||| ||| ||||||||||||||||||||    
T  31252423 aattttcagaaattatatattataatcattaaaagataatctcacccttaccttagaattgc 31252484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 4e-69; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 27 - 315
Target Start/End: Complemental strand, 19235354 - 19235062
Alignment:
Q  27 tagcattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttca-tcc-aattatgatcaacaac 124  Q
    |||||| ||||||||||||| |  |||||||| |||||||  ||||  | | ||||||||  || | || ||||||||| ||| |||||||||||| | |    
T  19235354 tagcatcaacaacaacaattaactccaatcaaacattcattcagaacttccaaaattcatctatcatattctattttcactccaaattatgatcaatatc 19235255  T
Q  125 agcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatcatcattaaccctaattttccc 224  Q
    | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||| |||||||||||||||||| ||||||    
T  19235254 aacaatatagattaggaaatcatactaatcatcaaatacaacattataaacctgattcttacacattttcttcagaatcatcattaaccctaaatttccc 19235155  T
Q  225 aattttaccataagaacagttaaatt-actcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    ||||||||| |||||||||||||||| | | | ||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  19235154 aattttaccttaagaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgc 19235062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 34 - 315
Target Start/End: Complemental strand, 12033723 - 12033438
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaa-ttcatacataacatgctattttca-tccaattatgatcaacaacagcaata 131  Q
    |||||||||||||||||||| ||||||||||||| | ||| ||||||| ||||| ||| | || ||||||||| | |||||| |||||||| || ||| |    
T  12033723 aacaacaacaattcagcccattcaagcattcataca-aaacttccaaaattcatccatcatattctattttcaattcaattacgatcaacatcaacaaca 12033625  T
Q  132 cagattaggaaatcatactaatcatcaaa-tacaacattataaacctgaatcttgcgcattttctt-caaaatcatcattaaccctaattttcccaattt 229  Q
     |||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||   | ||||||| ||||||||||||||||||| | |||||||||||    
T  12033624 tagattaagaaatcatactaaacatcaaagtacaacattataaacctgattcttataccttttctttcaaaatcatcattaacccttaatttcccaattt 12033525  T
Q  230 taccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    |||| ||||||||||| ||||  | ||||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  12033524 taccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgc 12033438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 6 - 315
Target Start/End: Original strand, 14865593 - 14865907
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    ||||||| |||||||| ||||||  ||| |||||||||||||||||||||||||||||||||| ||||  | | |||||||| ||| | || ||||||||    
T  14865593 gacatcaacaggaacaacaactaaacatcaacaacaacaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttc 14865692  T
Q  105 atc-caattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaa-tacaacattataaacctgaatcttgcgcattttctt-caaaa 201  Q
    ||  |||||| |||||| | || ||| |  ||||| |||||||||||||||||| || ||||||||||||||||||  |||| | | ||||||| |||||    
T  14865693 atttcaattacgatcaatatcaacaacatggattaagaaatcatactaatcatccaagtacaacattataaacctgcttcttacaccttttctttcaaaa 14865792  T
Q  202 tcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccaccc 300  Q
    |||||||||||| | ||||||||||||||||| ||||||||||| ||||  | ||||||||||||| | ||||||| | ||||| ||||| |||||||||    
T  14865793 tcatcattaaccattattttcccaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccaccc 14865892  T
Q  301 ttaccttagaattgc 315  Q
    |||||||||||||||    
T  14865893 ttaccttagaattgc 14865907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 34 - 315
Target Start/End: Original strand, 17131508 - 17131793
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaa-ttcatacataacatgctattttcat-ccaattatgatcaacaacagcaata 131  Q
    ||||||||||||||||| || | ||||||||||  | ||  ||||||| ||||| ||| | || |||||||||| |||||||  ||||||| || ||| |    
T  17131508 aacaacaacaattcagctcatttaagcattcatgca-aagcttccaaaattcatccatcatattctattttcattccaattacaatcaacatcaacaaca 17131606  T
Q  132 cagattaggaaatcatactaatcatcaaa-tacaacattataaacctgaatcttgcgcattttc-ttcaaaatcatcattaaccctaattttcccaattt 229  Q
     |||||| ||||||||||||| ||||||| |||||||||||||||||||  |||   | ||||| |||||||||||| |||||||||| |||||||||||    
T  17131607 tagattaagaaatcatactaaacatcaaagtacaacattataaacctgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattt 17131706  T
Q  230 taccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    |||| ||||||||||| ||||  | ||||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  17131707 taccttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgc 17131793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 23370562 - 23370500
Alignment:
Q  253 tcaattttcagaaatcatatattatcattattga-agatgatcccacccttaccttagaattg 314  Q
    ||||||||||||||| ||| ||||| |||||||| ||||  ||||||||||||||||||||||    
T  23370562 tcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattg 23370500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 51301589 - 51301650
Alignment:
Q  255 aattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    ||||||||||||| | ||||||| ||||||| ||||| ||| ||||||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattgc 51301650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 13302295 - 13302235
Alignment:
Q  255 aattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattg 314  Q
    ||||||||||||| | ||||||| ||||||||| ||| ||| |||||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattg 13302235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 13323842 - 13323782
Alignment:
Q  255 aattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattg 314  Q
    ||||||||||||| | ||||||| ||||||||| ||| ||| |||||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattg 13323782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 10389496 - 10389437
Alignment:
Q  257 ttttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||| ||| ||||| || |||||| ||| ||||||||||||||||||||||||    
T  10389496 ttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgc 10389437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 10414585 - 10414526
Alignment:
Q  257 ttttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||| ||| ||||| || |||||| ||| ||||||||||||||||||||||||    
T  10414585 ttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgc 10414526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 10421255 - 10421196
Alignment:
Q  257 ttttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||| ||| ||||| || |||||| ||| ||||||||||||||||||||||||    
T  10421255 ttttcagaaattatacattataatcattgaaagataatcccacccttaccttagaattgc 10421196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 13312951 - 13312891
Alignment:
Q  255 aattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattg 314  Q
    |||||||| |||| | ||||||| ||||||||| ||| ||| |||||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttagaattg 13312891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 6 - 315
Target Start/End: Complemental strand, 79798 - 79484
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    |||||||  ||||||||||||||  ||| ||||||| |||||||||||||||||||||||||| ||||  | | |||||||| ||| | || ||||||||    
T  79798 gacatcaaaaggaacagcaactaaacatcaacaacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttc 79699  T
Q  105 atc-caattatgatcaacaacagcaatacagattaggaaatcatactaatcat-caaatacaacattataaacctgaatcttgcgcattttctt-caaaa 201  Q
    ||  |||||| |||||| | || ||| |  ||||| ||||||||||||||||| ||||||||||||||||||||||| |||| | | ||||||| |||||    
T  79698 atttcaattacgatcaatatcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaa 79599  T
Q  202 tcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccaccc 300  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| ||||  | ||||||||||||| | ||||||| | ||||| ||||| |||||||||    
T  79598 tcatcattaacccttattttcccaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccaccc 79499  T
Q  301 ttaccttagaattgc 315  Q
    |||||||||||||||    
T  79498 ttaccttagaattgc 79484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 8e-61; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 6 - 315
Target Start/End: Complemental strand, 16147138 - 16146824
Alignment:
Q  6 gacatcatcaggaacagcaactag-cattaacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc 104  Q
    |||||||  ||||||||||||||  ||| ||||||| |||||||||||||||||||||||||| ||||  | | |||||||| ||| | || ||||||||    
T  16147138 gacatcaaaaggaacagcaactaaacatcaacaacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttc 16147039  T
Q  105 atc-caattatgatcaacaacagcaatacagattaggaaatcatactaatcat-caaatacaacattataaacctgaatcttgcgcattttctt-caaaa 201  Q
    ||  |||||| |||||| | || ||| |  ||||| ||||||||||||||||| ||||||||||||||||||||||| |||| | | ||||||| |||||    
T  16147038 atttcaattacgatcaatatcaacaacatggattaagaaatcatactaatcattcaaatacaacattataaacctgattcttacaccttttctttcaaaa 16146939  T
Q  202 tcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccaccc 300  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||| ||||  | ||||||||||||| | ||||||| | ||||| ||||| |||||||||    
T  16146938 tcatcattaacccttattttccaaattttaccttaagaacagtttaattgattaattttcagaaattacatattatgactattgaaagataatcccaccc 16146839  T
Q  301 ttaccttagaattgc 315  Q
    |||||||||||||||    
T  16146838 ttaccttagaattgc 16146824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 27906266 - 27906327
Alignment:
Q  255 aattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||||| ||| ||||| || |||||| ||| |||||||||||| |||||||||||    
T  27906266 aattttcagaaattatacattatgatcattgaaagataatcccacccttatcttagaattgc 27906327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 5e-53; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 34 - 315
Target Start/End: Original strand, 21710595 - 21710879
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattcc-aaattcatacataacatgctattttca-tccaattatgatcaacaacagcaata 131  Q
    |||||||||||||||||||| ||||||||||||| | ||  |||| |||||||| ||| | || ||||||||| ||||||||||||||||| || ||| |    
T  21710595 aacaacaacaattcagcccattcaagcattcataca-aagcttccaaaattcatccatcatattctattttcattccaattatgatcaacatcaacaaca 21710693  T
Q  132 cagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttc-ttcaaaatcatcattaaccctaattttcccaatttt 230  Q
     |||||| | ||||||||||| |||||| || ||||||||||||||||  |||   | ||||| |||||||||||| | |||||||| ||||||||||||    
T  21710694 tagattaaggaatcatactaaacatcaagtataacattataaacctgatccttatactttttctttcaaaatcatcttaaaccctaaatttcccaatttt 21710793  T
Q  231 accataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    ||| ||||||||||| ||||  | ||||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  21710794 accttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgc 21710879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 79 - 315
Target Start/End: Complemental strand, 20851366 - 20851126
Alignment:
Q  79 aaattcatacataacatgctattttcat-ccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaa-tacaacattataaacc 176  Q
    |||||||| ||| | || |||||||||| ||||||| ||||| || || ||| | |||||| ||||||||||||| ||||||| ||||||| ||||||||    
T  20851366 aaattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacc 20851267  T
Q  177 tgaatcttgcgcattttc-ttcaaaatcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatatt 275  Q
    |||  |||   | ||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||  | ||||||||||||| |||||||    
T  20851266 tgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatt 20851167  T
Q  276 atcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    || | ||||| ||||| ||||||||||||||||||||||||    
T  20851166 atgactattgaaagataatcccacccttaccttagaattgc 20851126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 79 - 315
Target Start/End: Complemental strand, 20857993 - 20857753
Alignment:
Q  79 aaattcatacataacatgctattttcat-ccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaa-tacaacattataaacc 176  Q
    |||||||| ||| | || |||||||||| ||||||| ||||| || || ||| | |||||| |||| |||||||| ||||||| ||||||| ||||||||    
T  20857993 aaattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacc 20857894  T
Q  177 tgaatcttgcgcattttctt-caaaatcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatatt 275  Q
    |||  |||   | ||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||  | ||||||||||||| |||||||    
T  20857893 tgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatt 20857794  T
Q  276 atcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    || | ||||| ||||| ||||||||||||||||||||||||    
T  20857793 atgactattgaaagataatcccacccttaccttagaattgc 20857753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 79 - 315
Target Start/End: Original strand, 21706097 - 21706337
Alignment:
Q  79 aaattcatacataacatgctattttcat-ccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaa-tacaacattataaacc 176  Q
    |||||||| ||| | || |||||||||| ||||||| ||||| || || ||| | |||||| |||| |||||||| ||||||| ||||||| ||||||||    
T  21706097 aaattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaaacatactaaacatcaaagtacaacaatataaacc 21706196  T
Q  177 tgaatcttgcgcattttctt-caaaatcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatatt 275  Q
    |||  |||   | ||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||  | ||||||||||||| |||||||    
T  21706197 tgatccttataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatt 21706296  T
Q  276 atcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    || | ||||| ||||| ||||||||||||||||||||||||    
T  21706297 atgactattgaaagataatcccacccttaccttagaattgc 21706337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 34 - 315
Target Start/End: Complemental strand, 50250 - 49964
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttca-tccaattatgatcaacaacagcaatac 132  Q
    ||||||| |||||||||||||||||||||||||| ||||  | | |||||||| ||| | || ||||||||| | |||||| |||||| | || ||| |     
T  50250 aacaacatcaattcagcccaatcaagcattcatacagaacttccaaaattcatccatcatattctattttcatttcaattacgatcaatatcaacaacat 50151  T
Q  133 agattaggaaatcatactaatc-atcaaatacaacattataaacctgaatcttgcgcattttc-ttcaaaatcatcattaaccctaattttcccaa-ttt 229  Q
     ||||| |||||||||||||||  ||||||| |||||||||||||||| |||| | | ||||| ||||||||||||||||||||| |||||||||| |||    
T  50150 ggattaagaaatcatactaatctttcaaatataacattataaacctgattcttacaccttttctttcaaaatcatcattaacccttattttcccaatttt 50051  T
Q  230 taccataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    |||| ||||||||||| ||||  | |||||| |||||| | ||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  50050 taccttaagaacagtttaattgattaatttttagaaattacatattatgactattgaaagataatcccacccttaccttagaattgc 49964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 314
Target Start/End: Complemental strand, 16266 - 16059
Alignment:
Q  108 caattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaatacaacattataaacctgaatcttgcgcattttcttcaaaatcatca 207  Q
    ||||||||||||| |  | ||||| ||||||| |||||||||||||||||||||||||||| || ||||||| |||||| ||||||||||||||||||||    
T  16266 caattatgatcaatatgaacaatatagattagaaaatcatactaatcatcaaatacaacatcatgaacctgattcttgcacattttcttcaaaatcatca 16167  T
Q  208 ttaaccctaattttcccaattttaccataagaacagttaaatt-actcaattttcagaaatcatatattatcattattg-aagatgatcccacccttacc 305  Q
    ||||||||||  |||| | ||||| | ||| |||||||||||| | | | ||||||||||||||||||||| | ||||| ||||| ||||||||||||||    
T  16166 ttaaccctaa-attccaatttttatcttaaaaacagttaaattgattaatttttcagaaatcatatattataactattgaaagataatcccacccttacc 16068  T
Q  306 ttagaattg 314  Q
    |||||||||    
T  16067 ttagaattg 16059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 79 - 315
Target Start/End: Complemental strand, 24320904 - 24320664
Alignment:
Q  79 aaattcatacataacatgctattttcat-ccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaa-tacaacattataaacc 176  Q
    |||||||| ||| | || |||||||||| ||||||| ||||| || || ||| | |||||| ||||||||||||| ||||||| ||||||| ||||||||    
T  24320904 aaattcattcatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacc 24320805  T
Q  177 tgaatcttgcgcattttctt-caaaatcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatatt 275  Q
    |||  | |   | ||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||  | ||||||||||||| |||||||    
T  24320804 tgatccctataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatt 24320705  T
Q  276 atcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    || | ||||| ||||| ||||||||||||||||||||||||    
T  24320704 atgactattgaaagataatcccacccttaccttagaattgc 24320664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 44477621 - 44477683
Alignment:
Q  253 tcaattttcagaaatcatatattatcattattga-agatgatcccacccttaccttagaattg 314  Q
    ||||||||||||||| ||| ||||| |||||||| ||||  || |||||||||||||||||||    
T  44477621 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 44477683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 44492779 - 44492841
Alignment:
Q  253 tcaattttcagaaatcatatattatcattattga-agatgatcccacccttaccttagaattg 314  Q
    ||||||||||||||| ||| ||||| |||||||| ||||  || |||||||||||||||||||    
T  44492779 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattg 44492841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 27940907 - 27940851
Alignment:
Q  254 caattttcagaaatcatatattatcattattgaagatgatcc-cacccttaccttag 309  Q
    |||||||||||||||||||||||| || ||||||| | | || ||||||||||||||    
T  27940907 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttag 27940851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 4e-38; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 79 - 315
Target Start/End: Complemental strand, 25181163 - 25180923
Alignment:
Q  79 aaattcatacataacatgctattttcat-ccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaa-tacaacattataaacc 176  Q
    |||||||| ||| | || |||||||||| ||||||| |||||||| || ||| | |||||| ||||||||||||| ||||||| ||||| | ||||||||    
T  25181163 aaattcatccatcatattctattttcattccaattacgatcaacatcaacaacatagattaagaaatcatactaaacatcaaagtacaaaaatataaacc 25181064  T
Q  177 tgaatcttgcgcattttctt-caaaatcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatatt 275  Q
    |||    |   | ||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||  | ||||||||||||| |||||||    
T  25181063 tgatcaatataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacagttcaattgattaattttcagaaattatatatt 25180964  T
Q  276 atcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    || | ||||| ||||| ||||||||||||||||||||||||    
T  25180963 atgactattgaaagataatcccacccttaccttagaattgc 25180923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 79 - 313
Target Start/End: Original strand, 10398 - 10636
Alignment:
Q  79 aaattcatacataacatgctattttcat-ccaattatgatcaacaacagcaatacagattaggaaatcatactaatcatcaaa-tacaacattataaacc 176  Q
    |||||||| ||| | || |||||||||| ||||||| ||||| || || ||| | |||||| ||||||||||||| ||||||| ||||||| ||||||||    
T  10398 aaattcatccatcatattctattttcattccaattacgatcagcatcaacaacatagattaagaaatcatactaaacatcaaagtacaacaatataaacc 10497  T
Q  177 tgaatcttgcgcattttctt-caaaatcatcattaaccctaattttcccaattttaccataagaacagttaaattactcaattttcagaaatcatatatt 275  Q
    | |  | |   | ||||||| |||||||||| |||||||||| ||||||||||||||| |||||||| || ||||  | ||||||||||||| |||||||    
T  10498 ttatccctataccttttctttcaaaatcatccttaaccctaaatttcccaattttaccttaagaacaattcaattgattaattttcagaaattatatatt 10597  T
Q  276 atcattattg-aagatgatcccacccttaccttagaatt 313  Q
    || | ||||| ||||| ||||||||||||||||||||||    
T  10598 atgactattgaaagataatcccacccttaccttagaatt 10636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 315
Target Start/End: Original strand, 26885183 - 26885243
Alignment:
Q  255 aattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||||| ||| ||||  ||||||||| ||| ||||||||||||||||||||||||    
T  26885183 aattttcagaaattatacattag-attattgaaagataatcccacccttaccttagaattgc 26885243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 27207774 - 27207713
Alignment:
Q  255 aattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||||| ||| ||||  || |||||| ||| ||||||||||||||||||||||||    
T  27207774 aattttcagaaattatacattaaaatcattgaaagataatcccacccttaccttagaattgc 27207713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 34 - 315
Target Start/End: Original strand, 135216 - 135499
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttca-tccaattatgatcaacaacagcaatac 132  Q
    |||||||||||||||||||| ||||||||||||| | ||| |||| ||||||| ||| | || ||||||||| ||||||| ||||||  | || ||| |     
T  135216 aacaacaacaattcagcccattcaagcattcataca-aaacttcccaattcatccatcatattctattttcattccaattttgatcacgatcaacaacat 135314  T
Q  133 agattaggaaatcatactaatcatcaaa-tacaacattataaacctgaatcttgcgcattttc-ttcaaaatcatcattaaccctaattttcccaatttt 230  Q
    |||||| ||||||||||||| ||||||| |||||||  |||||||||| |||| | | ||||| ||||||||||||||||||||| |  ||| |||||||    
T  135315 agattaagaaatcatactaa-catcaaattacaacacaataaacctgattcttacaccttttctttcaaaatcatcattaaccctta-attctcaatttt 135412  T
Q  231 acc-ataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattgc 315  Q
    |||  ||||||||||| ||||  | ||||||||||||| ||||||||| | ||||| ||||| ||| ||| ||||||||||||||||    
T  135413 acctttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatctcacgcttaccttagaattgc 135499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 34 - 314
Target Start/End: Original strand, 9113 - 9396
Alignment:
Q  34 aacaacaacaattcagcccaatcaagcattcatatagaaaattccaaattcatacataacatgctattttc-atccaattatgatcaacaacagcaatac 132  Q
    |||||||||||||||||||| ||||||| ||||| | ||| |||| ||||||| ||| | || ||||||||  ||||||| ||||||  | || ||| |     
T  9113 aacaacaacaattcagcccattcaagcaatcataca-aaacttcccaattcatccatcatattctattttcgttccaattctgatcacaatcaacaacat 9211  T
Q  133 agattaggaaatcatactaatcatcaaa-tacaacattataaacctgaatcttgcgcattttc-ttcaaaatcatcattaaccctaattttcccaatttt 230  Q
    |||||  ||||||||||||| ||||||| |||||||  |||||||| | |||| | | ||||| ||||||||||||||||||||| |  |||||||||||    
T  9212 agattgagaaatcatactaaacatcaaattacaacacaataaacctaattcttacaccttttctttcaaaatcatcattaaccctta-attcccaatttt 9310  T
Q  231 ac-cataagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattg 314  Q
    ||   ||||||||||| ||||  | ||||||||||||| ||||||||| | ||||| ||||| |||||||||||||||||||||||    
T  9311 acttttaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattg 9396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 195 - 315
Target Start/End: Complemental strand, 2027 - 1906
Alignment:
Q  195 ttcaaaatcatcattaaccctaattttcccaattttaccat-aagaacagttaaattactcaattttcagaaatcatatattatcattattg-aagatga 292  Q
    ||||||||||||||||||||| | || |||||||||||  | |||||||||| ||||  | ||||||||||||| ||||||||| | ||||| ||||| |    
T  2027 ttcaaaatcatcattaacccttaatt-cccaattttactttcaagaacagttcaattgattaattttcagaaattatatattatgactattgaaagataa 1929  T
Q  293 tcccacccttaccttagaattgc 315  Q
    |||||||||||||||| ||||||    
T  1928 tcccacccttaccttacaattgc 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 307
Target Start/End: Original strand, 12832 - 13019
Alignment:
Q  133 agattaggaaatcatactaatcat-caaatacaacattataaacct-gaatctt-gcgcattttcttcaaaatcat-cattaaccctaattttccc--aa 226  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || ||||  | ||||| ||||| |||||| |||||||||||| ||||||  |     
T  12832 agattaggaaatcatactaatcatacaaatacaacattataaacctagattcttaacacatttccttcagaatcatacattaaccctaaatttccccaat 12931  T
Q  227 ttttacc-ataagaacagttaaatt----actcaattttcagaaatcatatattatcattattg--aagatgatcccacccttacctt 307  Q
    |||||||  |||||||||||||| |    | | | |||| |||||||||||||||  | |||||  ||||| ||||||||||||||||    
T  12932 ttttacctttaagaacagttaaaatttagattaattttttagaaatcatatattagaactattgtaaagataatcccacccttacctt 13019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 5912 - 5851
Alignment:
Q  255 aattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||||| ||||||||| || |||||| ||| ||||||||||||||||||||||||    
T  5912 aattttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgc 5851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 13947 - 13888
Alignment:
Q  257 ttttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||| ||||||||| || |||||| ||| ||||||||||||||||||||||||    
T  13947 ttttcagaaattatatattataatcattgaaagataatcccacccttaccttagaattgc 13888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 6 - 65
Alignment:
Q  257 ttttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||||||||||||  | ||||||| ||| ||||||||||||||||||||||||    
T  6 ttttcagaaatcatatattagaactattgaaagataatcccacccttaccttagaattgc 65  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 10252 - 10190
Alignment:
Q  253 tcaattttcagaaatcatatattatcattattga-agatgatcccacccttaccttagaattg 314  Q
    ||||||||||||||| ||| ||||| |||||||| ||||  ||||||||||||||||||||||    
T  10252 tcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattg 10190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 1582 - 1520
Alignment:
Q  253 tcaattttcagaaatcatatattatcattattga-agatgatcccacccttaccttagaattg 314  Q
    ||||||||||||||| ||| ||||| |||||||| ||||  ||||||||||||||||||||||    
T  1582 tcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttagaattg 1520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 10239 - 10299
Alignment:
Q  255 aattttcagaaatcatatattatcattattg-aagatgatcccacccttaccttagaattg 314  Q
    ||||||||||||| | ||||||| ||||||| ||||| ||| |||||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttagaattg 10299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 111684 - 111747
Alignment:
Q  253 tcaattttcagaaatcatatattatcattattga-agatgatcccacccttaccttagaattgc 315  Q
    ||||||||||||||| ||| ||||| |||||||| ||||  || ||||||||||||||||||||    
T  111684 tcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagaattgc 111747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 1388 - 1425
Alignment:
Q  194 cttcaaaatcatcattaaccctaattttcccaatttta 231  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  1388 cttcaaaatcagcattaaccctaatttttccaatttta 1425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 23624 - 23563
Alignment:
Q  255 aattttcagaaatcatatattatcattattgaa-gatgatcccacccttaccttagaattgc 315  Q
    ||||||||||||| ||| ||||| || ||| || ||| ||||||||||||||||||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgc 23563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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