View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6619_low_25 (Length: 296)
Name: NF6619_low_25
Description: NF6619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6619_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 21828832 - 21829125
Alignment:
| Q |
1 |
caacatatttccaacaagatataccaaaaagaaaagacaacattgcaaaatggaaaatgtccaaacatattattaccataatcattatgtgcaaagaatt |
100 |
Q |
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| T |
21828832 |
caacatatttccaacaagatataccaaaaagaaaagacaacattgcaaaatggaaaatgtccaaacatattattaccataatcattatgtgcaaagaatt |
21828931 |
T |
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| Q |
101 |
tcaagcatgtttttgtttccaagtcccataatctcactgtcttgtccattgaagatgaaagaagtagctgcaatgaaaaacaaaattttaacattttatt |
200 |
Q |
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| T |
21828932 |
tcaagcatgtttttgtttccaagtcccataatctcactgtcttgtccattgaagatgaaagaagtagctgcaatgaaaaacaaaattttaacattttatt |
21829031 |
T |
|
| Q |
201 |
tacaatgacaaaaatatttttgttatctctacaataaatactaactatgatcacatcacatcaatcatatttgacgcagttgtccacattttca |
294 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||| |
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| T |
21829032 |
tacaatgacaaaaatatttttgttatctctacaataaatactaactatgatcacatcacatcaattatatttgaagcaattgtccacattttca |
21829125 |
T |
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