View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6619_low_35 (Length: 237)
Name: NF6619_low_35
Description: NF6619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6619_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 21829349 - 21829572
Alignment:
| Q |
1 |
aatcacaatctcaacaattgggaatgtaatctaaaaccatgttattatcaaaacaaaagtaaaaacattcatctactaaaac-atacctgagatctagac |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |
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| T |
21829349 |
aatcacaatctcaacaattgggaatgtaatctaaaaccatgttattatcaaaacaaaagtaaaaacattcgtctactaaaaccatacctgagatctagac |
21829448 |
T |
|
| Q |
100 |
caagacaaatccaaaacttcatccaaatgaccatgaaaagaacaataaggtttctcagagaaagtaaaaacattttcaggcacatgaacatattcaggaa |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21829449 |
caagacaaatccaaaacttcatccaaatgaccatgaaaagaacaataaggtttctcagagaaagtaaaaacattttcaggcacatgaacatattcaggaa |
21829548 |
T |
|
| Q |
200 |
tagctgctgaccctcctcctcttt |
223 |
Q |
| |
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|||||||||||||||||||||||| |
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|
| T |
21829549 |
tagctgctgaccctcctcctcttt |
21829572 |
T |
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