View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6619_low_38 (Length: 229)
Name: NF6619_low_38
Description: NF6619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6619_low_38 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 48598745 - 48598517
Alignment:
| Q |
1 |
aaatcaaggtgttcgttgtatgctataaagcacatacacctttaagattagacatgtcacggtgtctaacacgcgtcaatgtctgatactcctataacac |
100 |
Q |
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| T |
48598745 |
aaatcaaggtgttcattttatgctataaagcacatacacctttaagattagacatgtcacggtgtctaacatgcgtcaatgtctgatactcatataacac |
48598646 |
T |
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| Q |
101 |
ttatacaataggtgttggataagtgtcttaaataaatggattttttctttattcaacgaccaatgtttgacacatatacaacacttatatgaggtttgtc |
200 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |
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| T |
48598645 |
ttatacaataggtgttggataagtgtcttcaataaatggattttttctttattcaacgaccaatgtttgatacatatacaacacttatatgaggtgtgtc |
48598546 |
T |
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| Q |
201 |
ggactattcagacaaatgccttaattttt |
229 |
Q |
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|||||||||||||||||| |||||||||| |
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| T |
48598545 |
ggactattcagacaaatgtcttaattttt |
48598517 |
T |
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