View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6623_high_25 (Length: 239)
Name: NF6623_high_25
Description: NF6623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6623_high_25 |
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Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 39835720 - 39835926
Alignment:
| Q |
18 |
cctactagggcaacttatctaagatttgattggatatatagtatatattttttgtcattgtcacgctaaagactaggaagtcaagtcaacttagggtgtg |
117 |
Q |
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| T |
39835720 |
cctactagggcaacttatctaagatttgattggatatatagtatatattttttgtcattgtcacgctaaagactaggaagtcaagtcaacttagggtgtg |
39835819 |
T |
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| Q |
118 |
cacaaaggataagagtttttaatcaatttcaatgcaatttaaaaatagttcaaaaccgatttacatttataaattgatttaatatcatgaatgagtttta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39835820 |
cacaaaggataagagtttttaatcaatttcaatgcaatttaaaaatagttcaaaaccgatttacatttataaattgatttaatatcatgaatgagtttta |
39835919 |
T |
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| Q |
218 |
aaactta |
224 |
Q |
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||||||| |
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| T |
39835920 |
aaactta |
39835926 |
T |
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