View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6623_low_3 (Length: 591)

Name: NF6623_low_3
Description: NF6623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6623_low_3
NF6623_low_3
[»] chr5 (42 HSPs)
chr5 (46-218)||(33123090-33123260)
chr5 (48-188)||(22567637-22567777)
chr5 (219-334)||(17028225-17028340)
chr5 (343-408)||(33123039-33123104)
chr5 (218-334)||(22737081-22737197)
chr5 (219-334)||(25627057-25627171)
chr5 (216-334)||(30883158-30883277)
chr5 (217-334)||(16436616-16436731)
chr5 (215-331)||(87388-87503)
chr5 (219-290)||(892479-892550)
chr5 (219-334)||(21589288-21589403)
chr5 (260-334)||(28285293-28285367)
chr5 (249-334)||(16773837-16773922)
chr5 (261-334)||(43442238-43442311)
chr5 (218-302)||(26078044-26078128)
chr5 (219-334)||(29075781-29075896)
chr5 (218-300)||(14285160-14285242)
chr5 (218-300)||(34984805-34984887)
chr5 (228-334)||(35796580-35796686)
chr5 (229-302)||(18437095-18437168)
chr5 (219-294)||(5390853-5390926)
chr5 (250-334)||(12877724-12877808)
chr5 (261-333)||(29173532-29173604)
chr5 (219-294)||(21549138-21549213)
chr5 (215-334)||(30109270-30109388)
chr5 (275-334)||(35705042-35705101)
chr5 (219-300)||(7918464-7918545)
chr5 (248-333)||(39327053-39327137)
chr5 (226-334)||(22020823-22020931)
chr5 (262-334)||(27840980-27841052)
chr5 (261-333)||(29210400-29210472)
chr5 (261-333)||(37258328-37258400)
chr5 (219-290)||(19043458-19043529)
chr5 (218-289)||(40461619-40461690)
chr5 (262-332)||(1279034-1279104)
chr5 (261-330)||(5156090-5156159)
chr5 (281-334)||(10054109-10054162)
chr5 (248-297)||(15485418-15485466)
chr5 (248-333)||(25979199-25979284)
chr5 (278-322)||(7085728-7085772)
chr5 (219-295)||(16457810-16457886)
chr5 (261-333)||(18206608-18206680)
[»] chr1 (62 HSPs)
chr1 (32-221)||(19492256-19492445)
chr1 (218-334)||(6122793-6122909)
chr1 (219-334)||(31794225-31794340)
chr1 (219-334)||(10526823-10526938)
chr1 (239-333)||(44961785-44961879)
chr1 (219-333)||(52116743-52116857)
chr1 (343-408)||(19492208-19492273)
chr1 (218-334)||(8177143-8177259)
chr1 (218-302)||(11063555-11063639)
chr1 (226-334)||(17745218-17745325)
chr1 (258-330)||(51814533-51814605)
chr1 (218-300)||(36371469-36371551)
chr1 (216-334)||(40257396-40257514)
chr1 (215-300)||(4566544-4566629)
chr1 (219-300)||(9165190-9165271)
chr1 (347-408)||(17981583-17981643)
chr1 (235-334)||(2799878-2799977)
chr1 (219-334)||(16893394-16893509)
chr1 (221-300)||(33700768-33700847)
chr1 (215-300)||(8904410-8904495)
chr1 (217-334)||(21547441-21547558)
chr1 (218-334)||(6650594-6650710)
chr1 (230-334)||(14787297-14787401)
chr1 (253-333)||(15064999-15065079)
chr1 (219-295)||(19528327-19528403)
chr1 (249-293)||(21392867-21392911)
chr1 (218-334)||(25297771-25297887)
chr1 (219-311)||(51703779-51703871)
chr1 (230-326)||(52336743-52336839)
chr1 (249-300)||(3265954-3266005)
chr1 (251-334)||(7219879-7219962)
chr1 (219-333)||(50901581-50901695)
chr1 (212-334)||(21267954-21268076)
chr1 (219-295)||(21694446-21694519)
chr1 (220-334)||(44126396-44126510)
chr1 (248-334)||(48391293-48391379)
chr1 (261-295)||(52029937-52029971)
chr1 (264-333)||(3799951-3800020)
chr1 (226-295)||(15786320-15786389)
chr1 (249-334)||(36124863-36124948)
chr1 (254-295)||(38947472-38947513)
chr1 (219-312)||(42787208-42787301)
chr1 (226-326)||(19088216-19088316)
chr1 (262-334)||(51281394-51281466)
chr1 (219-334)||(2219972-2220087)
chr1 (250-333)||(10150831-10150914)
chr1 (237-292)||(21184391-21184446)
chr1 (218-333)||(41508830-41508945)
chr1 (249-295)||(4280451-4280497)
chr1 (273-319)||(25237094-25237140)
chr1 (106-152)||(36342426-36342472)
chr1 (261-334)||(1600253-1600326)
chr1 (226-295)||(27430126-27430195)
chr1 (248-333)||(27476733-27476818)
chr1 (217-270)||(35187917-35187970)
chr1 (219-300)||(39964505-39964585)
chr1 (250-295)||(40087948-40087993)
chr1 (261-330)||(40814373-40814442)
chr1 (261-333)||(1247155-1247227)
chr1 (219-295)||(16169978-16170054)
chr1 (278-318)||(33905616-33905656)
chr1 (278-322)||(46113504-46113548)
[»] chr2 (73 HSPs)
chr2 (46-218)||(33523799-33523969)
chr2 (218-333)||(21195638-21195753)
chr2 (23-174)||(12511761-12511904)
chr2 (48-216)||(21001008-21001174)
chr2 (343-408)||(33523955-33524020)
chr2 (98-196)||(21212406-21212504)
chr2 (216-334)||(42602551-42602669)
chr2 (218-334)||(37480074-37480190)
chr2 (29-119)||(24195373-24195463)
chr2 (219-333)||(42327357-42327471)
chr2 (219-334)||(23052484-23052599)
chr2 (218-330)||(39714991-39715103)
chr2 (219-334)||(1435064-1435178)
chr2 (216-295)||(29503268-29503347)
chr2 (219-332)||(19244109-19244222)
chr2 (217-334)||(34041549-34041666)
chr2 (218-326)||(11251086-11251194)
chr2 (250-334)||(33582004-33582088)
chr2 (217-334)||(4060175-4060292)
chr2 (343-408)||(23055305-23055370)
chr2 (218-334)||(7798997-7799112)
chr2 (343-407)||(23055732-23055796)
chr2 (230-333)||(12086091-12086194)
chr2 (219-294)||(13803495-13803570)
chr2 (343-381)||(49417-49455)
chr2 (220-334)||(37755932-37756046)
chr2 (219-300)||(42922414-42922496)
chr2 (219-300)||(11062360-11062441)
chr2 (218-287)||(16131670-16131739)
chr2 (343-408)||(21000955-21001020)
chr2 (212-300)||(1729809-1729897)
chr2 (348-396)||(21212518-21212566)
chr2 (278-330)||(39764992-39765044)
chr2 (219-334)||(4438940-4439055)
chr2 (218-333)||(14500276-14500391)
chr2 (261-332)||(37971937-37972008)
chr2 (248-295)||(40791490-40791537)
chr2 (161-218)||(49441-49499)
chr2 (219-281)||(16381668-16381730)
chr2 (264-333)||(12497744-12497813)
chr2 (217-302)||(19322766-19322851)
chr2 (250-295)||(32687512-32687557)
chr2 (219-300)||(40416385-40416466)
chr2 (238-299)||(42420288-42420349)
chr2 (220-300)||(16918573-16918653)
chr2 (219-301)||(19605968-19606047)
chr2 (278-322)||(35171851-35171895)
chr2 (248-295)||(4262302-4262349)
chr2 (219-334)||(5147641-5147755)
chr2 (261-300)||(8192475-8192513)
chr2 (262-333)||(9577879-9577950)
chr2 (219-290)||(18259730-18259801)
chr2 (248-295)||(21939123-21939170)
chr2 (40-90)||(49522-49572)
chr2 (249-295)||(12632748-12632794)
chr2 (216-294)||(17737625-17737702)
chr2 (34-83)||(21212354-21212404)
chr2 (256-334)||(21303955-21304033)
chr2 (259-333)||(42187094-42187168)
chr2 (257-334)||(14780544-14780621)
chr2 (305-334)||(26773098-26773127)
chr2 (250-295)||(33839260-33839305)
chr2 (355-388)||(42644923-42644956)
chr2 (278-322)||(1191564-1191608)
chr2 (262-334)||(2750587-2750659)
chr2 (305-333)||(5315556-5315584)
chr2 (278-322)||(6714383-6714427)
chr2 (236-296)||(12994375-12994435)
chr2 (218-334)||(25931005-25931121)
chr2 (213-300)||(33569853-33569941)
chr2 (261-321)||(35092573-35092633)
chr2 (278-322)||(36242414-36242458)
chr2 (278-322)||(41314043-41314087)
[»] chr7 (89 HSPs)
chr7 (22-218)||(26130484-26130663)
chr7 (218-333)||(33181172-33181287)
chr7 (46-206)||(20933202-20933368)
chr7 (93-216)||(30676453-30676577)
chr7 (100-216)||(30676592-30676710)
chr7 (519-577)||(26130855-26130913)
chr7 (343-408)||(30676698-30676763)
chr7 (344-408)||(26130650-26130714)
chr7 (126-217)||(20934317-20934408)
chr7 (219-334)||(43590907-43591022)
chr7 (343-408)||(30676400-30676465)
chr7 (219-334)||(18363696-18363810)
chr7 (218-333)||(45709670-45709785)
chr7 (219-300)||(26459405-26459486)
chr7 (248-333)||(41519072-41519157)
chr7 (214-334)||(17040973-17041093)
chr7 (217-333)||(24438209-24438325)
chr7 (226-334)||(41519226-41519333)
chr7 (226-330)||(42711965-42712069)
chr7 (219-334)||(15137553-15137668)
chr7 (219-290)||(27776172-27776243)
chr7 (274-333)||(48983695-48983754)
chr7 (350-408)||(20933371-20933429)
chr7 (219-330)||(30442488-30442597)
chr7 (218-334)||(30579334-30579450)
chr7 (219-334)||(20335792-20335907)
chr7 (219-334)||(39631844-39631959)
chr7 (220-294)||(35513467-35513541)
chr7 (218-300)||(43215183-43215265)
chr7 (261-334)||(9183152-9183225)
chr7 (235-327)||(11700181-11700272)
chr7 (226-334)||(15905635-15905742)
chr7 (215-334)||(11720921-11721040)
chr7 (218-301)||(23552117-23552200)
chr7 (248-334)||(4572258-4572344)
chr7 (219-333)||(5273552-5273666)
chr7 (264-334)||(21558173-21558243)
chr7 (248-334)||(29385704-29385790)
chr7 (218-334)||(41487361-41487474)
chr7 (219-333)||(48771938-48772052)
chr7 (224-278)||(48984146-48984200)
chr7 (248-333)||(6450420-6450505)
chr7 (343-408)||(20934395-20934460)
chr7 (261-334)||(25132340-25132412)
chr7 (219-300)||(33869440-33869521)
chr7 (218-334)||(2446307-2446423)
chr7 (261-333)||(3174969-3175041)
chr7 (250-334)||(7721400-7721484)
chr7 (236-312)||(9608612-9608688)
chr7 (236-312)||(9836184-9836260)
chr7 (364-408)||(18031943-18031987)
chr7 (219-295)||(22760863-22760939)
chr7 (219-295)||(25956293-25956368)
chr7 (248-334)||(22035427-22035513)
chr7 (219-285)||(25021345-25021411)
chr7 (248-333)||(279916-280000)
chr7 (249-294)||(21570033-21570078)
chr7 (218-295)||(38374599-38374676)
chr7 (219-288)||(42836008-42836077)
chr7 (248-333)||(44628146-44628230)
chr7 (219-295)||(39499719-39499795)
chr7 (219-334)||(23301563-23301678)
chr7 (248-299)||(23330864-23330914)
chr7 (493-524)||(26130797-26130828)
chr7 (260-295)||(29916808-29916843)
chr7 (229-300)||(37162345-37162416)
chr7 (278-333)||(41975946-41976001)
chr7 (219-285)||(3280495-3280561)
chr7 (219-289)||(5579240-5579310)
chr7 (248-334)||(5668532-5668618)
chr7 (249-295)||(14058283-14058329)
chr7 (249-295)||(14368311-14368357)
chr7 (236-334)||(33222387-33222485)
chr7 (261-334)||(2882992-2883064)
chr7 (248-333)||(5934150-5934235)
chr7 (261-334)||(7309398-7309470)
chr7 (226-295)||(7499924-7499993)
chr7 (219-292)||(7801180-7801253)
chr7 (261-294)||(31835234-31835267)
chr7 (261-334)||(37473656-37473729)
chr7 (281-334)||(43663056-43663109)
chr7 (261-334)||(45228986-45229059)
chr7 (236-300)||(2962476-2962540)
chr7 (306-334)||(3968615-3968643)
chr7 (278-322)||(22703541-22703585)
chr7 (250-334)||(27313695-27313779)
chr7 (250-331)||(29196936-29197019)
chr7 (239-295)||(29785301-29785357)
chr7 (261-333)||(48959240-48959312)
[»] chr8 (65 HSPs)
chr8 (219-334)||(11819776-11819891)
chr8 (53-218)||(16979310-16979472)
chr8 (219-333)||(27750730-27750844)
chr8 (29-177)||(22681269-22681410)
chr8 (219-333)||(33727835-33727949)
chr8 (218-334)||(44780075-44780191)
chr8 (217-326)||(19703456-19703565)
chr8 (101-193)||(22751684-22751776)
chr8 (217-334)||(16852338-16852455)
chr8 (221-330)||(3624582-3624690)
chr8 (343-408)||(16979259-16979324)
chr8 (219-334)||(18540298-18540413)
chr8 (219-333)||(6436517-6436631)
chr8 (221-330)||(2203494-2203603)
chr8 (261-333)||(11492035-11492107)
chr8 (219-327)||(11518845-11518953)
chr8 (219-327)||(23361617-23361725)
chr8 (219-333)||(20994419-20994534)
chr8 (219-333)||(968362-968476)
chr8 (219-333)||(26688865-26688979)
chr8 (217-331)||(35641865-35641979)
chr8 (217-334)||(3058011-3058127)
chr8 (237-334)||(6536538-6536635)
chr8 (218-334)||(28783059-28783175)
chr8 (101-146)||(35286759-35286804)
chr8 (264-333)||(43594280-43594349)
chr8 (215-295)||(18897162-18897242)
chr8 (219-334)||(29431011-29431126)
chr8 (354-408)||(31233741-31233795)
chr8 (218-295)||(28566104-28566180)
chr8 (218-295)||(28573727-28573803)
chr8 (218-334)||(8484998-8485114)
chr8 (29-85)||(31233593-31233649)
chr8 (274-330)||(45527610-45527666)
chr8 (216-295)||(3826777-3826856)
chr8 (248-334)||(4436004-4436090)
chr8 (220-330)||(29858014-29858124)
chr8 (259-333)||(31408084-31408158)
chr8 (222-300)||(35690059-35690137)
chr8 (217-330)||(13129666-13129779)
chr8 (218-334)||(11793482-11793598)
chr8 (250-334)||(18546323-18546407)
chr8 (258-294)||(24675513-24675549)
chr8 (251-295)||(28540454-28540498)
chr8 (263-334)||(7140753-7140823)
chr8 (219-294)||(12281494-12281569)
chr8 (218-293)||(12988427-12988502)
chr8 (343-408)||(22751782-22751851)
chr8 (248-311)||(26061717-26061780)
chr8 (226-333)||(28560614-28560720)
chr8 (219-334)||(30483845-30483960)
chr8 (261-295)||(21566782-21566816)
chr8 (219-333)||(23874345-23874458)
chr8 (262-300)||(33017257-33017295)
chr8 (273-311)||(36094734-36094772)
chr8 (217-286)||(5264542-5264611)
chr8 (237-334)||(8794307-8794403)
chr8 (278-322)||(4698825-4698869)
chr8 (218-290)||(4830486-4830558)
chr8 (219-295)||(6530807-6530882)
chr8 (278-334)||(7347896-7347952)
chr8 (258-334)||(8059671-8059747)
chr8 (35-67)||(22751624-22751656)
chr8 (230-334)||(40791856-40791960)
chr8 (262-333)||(44595817-44595889)
[»] scaffold0003 (3 HSPs)
scaffold0003 (29-218)||(242873-243061)
scaffold0003 (343-379)||(247357-247393)
scaffold0003 (81-139)||(247241-247299)
[»] chr3 (63 HSPs)
chr3 (219-334)||(8075088-8075203)
chr3 (219-326)||(8170672-8170779)
chr3 (223-334)||(49452884-49452987)
chr3 (223-334)||(2667866-2667977)
chr3 (219-334)||(14339610-14339725)
chr3 (218-300)||(27093356-27093438)
chr3 (217-295)||(30311304-30311382)
chr3 (219-334)||(10445100-10445216)
chr3 (49-172)||(30078000-30078121)
chr3 (217-333)||(36720379-36720495)
chr3 (218-333)||(19154630-19154745)
chr3 (219-333)||(27923005-27923119)
chr3 (343-401)||(48294715-48294773)
chr3 (219-320)||(14186648-14186748)
chr3 (219-300)||(16354887-16354968)
chr3 (261-334)||(52769944-52770017)
chr3 (218-334)||(10499070-10499186)
chr3 (219-279)||(19341801-19341861)
chr3 (250-334)||(20501727-20501810)
chr3 (219-295)||(21960551-21960627)
chr3 (226-330)||(30510164-30510268)
chr3 (218-330)||(31520570-31520682)
chr3 (230-326)||(32651407-32651503)
chr3 (249-293)||(39976433-39976477)
chr3 (218-289)||(7975417-7975488)
chr3 (227-334)||(51903839-51903946)
chr3 (219-333)||(37788428-37788541)
chr3 (248-334)||(44743816-44743902)
chr3 (213-294)||(15048062-15048143)
chr3 (261-330)||(33899656-33899725)
chr3 (249-333)||(16212934-16213018)
chr3 (223-334)||(4844472-4844583)
chr3 (223-334)||(4870168-4870279)
chr3 (124-218)||(48294759-48294854)
chr3 (219-333)||(4222141-4222255)
chr3 (218-300)||(46518627-46518709)
chr3 (217-294)||(11642210-11642287)
chr3 (218-299)||(34844370-34844450)
chr3 (261-334)||(40777055-40777127)
chr3 (262-334)||(7973599-7973671)
chr3 (262-334)||(13808846-13808918)
chr3 (254-326)||(26972418-26972490)
chr3 (249-333)||(30715772-30715855)
chr3 (217-299)||(8051212-8051294)
chr3 (227-293)||(11612307-11612373)
chr3 (249-295)||(26411575-26411621)
chr3 (248-330)||(28531023-28531105)
chr3 (272-334)||(46552984-46553046)
chr3 (226-300)||(53412952-53413026)
chr3 (261-302)||(3427546-3427587)
chr3 (219-300)||(8796088-8796168)
chr3 (265-333)||(17035032-17035100)
chr3 (248-333)||(25035734-25035819)
chr3 (219-300)||(28703399-28703480)
chr3 (261-334)||(33464505-33464577)
chr3 (261-330)||(33861699-33861768)
chr3 (277-322)||(40133551-40133596)
chr3 (278-322)||(15566601-15566645)
chr3 (278-322)||(25289816-25289860)
chr3 (219-331)||(31788935-31789046)
chr3 (250-294)||(45308903-45308947)
chr3 (220-295)||(47454617-47454692)
chr3 (278-322)||(49258364-49258408)
[»] chr4 (65 HSPs)
chr4 (219-334)||(8030165-8030280)
chr4 (219-333)||(31826609-31826723)
chr4 (101-218)||(22517368-22517486)
chr4 (218-334)||(7949415-7949531)
chr4 (101-216)||(32632333-32632449)
chr4 (102-173)||(56126173-56126244)
chr4 (266-334)||(9693459-9693527)
chr4 (35-216)||(20953582-20953758)
chr4 (219-330)||(19238542-19238653)
chr4 (347-405)||(22517476-22517534)
chr4 (219-300)||(37109346-37109427)
chr4 (218-334)||(37720175-37720291)
chr4 (226-334)||(49576855-49576963)
chr4 (219-330)||(19229173-19229283)
chr4 (217-300)||(19680783-19680866)
chr4 (239-334)||(49262645-49262740)
chr4 (218-333)||(51250484-51250599)
chr4 (248-334)||(23377985-23378071)
chr4 (219-295)||(31759658-31759734)
chr4 (235-334)||(38869784-38869883)
chr4 (343-408)||(23500225-23500288)
chr4 (249-334)||(51954144-51954229)
chr4 (343-400)||(56126274-56126331)
chr4 (226-334)||(7292759-7292867)
chr4 (255-331)||(21375813-21375889)
chr4 (219-334)||(37274420-37274536)
chr4 (258-334)||(47386752-47386828)
chr4 (261-333)||(51622527-51622599)
chr4 (235-334)||(4249193-4249292)
chr4 (219-334)||(28635696-28635811)
chr4 (359-402)||(32632467-32632510)
chr4 (226-333)||(41683756-41683863)
chr4 (219-294)||(46545711-46545786)
chr4 (219-330)||(55427165-55427276)
chr4 (236-330)||(13015444-13015538)
chr4 (219-300)||(1730484-1730565)
chr4 (343-388)||(37270402-37270447)
chr4 (248-333)||(46295126-46295211)
chr4 (216-295)||(2185032-2185112)
chr4 (236-300)||(10047997-10048061)
chr4 (32-96)||(23500096-23500160)
chr4 (239-334)||(17618301-17618396)
chr4 (250-327)||(4185124-4185201)
chr4 (22-83)||(37270227-37270288)
chr4 (250-294)||(8931085-8931129)
chr4 (226-330)||(9936926-9937030)
chr4 (249-333)||(11592115-11592199)
chr4 (226-330)||(24234652-24234755)
chr4 (218-334)||(29195094-29195209)
chr4 (261-300)||(7539632-7539671)
chr4 (248-295)||(46329193-46329240)
chr4 (268-334)||(2732043-2732109)
chr4 (252-334)||(27104989-27105071)
chr4 (248-334)||(32992641-32992727)
chr4 (268-334)||(34075557-34075622)
chr4 (248-330)||(39509099-39509181)
chr4 (261-334)||(56440443-56440517)
chr4 (261-330)||(8325344-8325413)
chr4 (262-295)||(43408400-43408433)
chr4 (248-300)||(2622390-2622442)
chr4 (261-333)||(21660106-21660178)
chr4 (261-333)||(21668870-21668942)
chr4 (261-333)||(26605674-26605746)
chr4 (254-294)||(36421239-36421279)
chr4 (219-295)||(47044717-47044793)
[»] scaffold0071 (2 HSPs)
scaffold0071 (22-218)||(58193-58389)
scaffold0071 (343-408)||(58142-58207)
[»] chr6 (41 HSPs)
chr6 (234-334)||(20213056-20213156)
chr6 (234-334)||(22107079-22107179)
chr6 (46-218)||(17306168-17306336)
chr6 (217-333)||(14199909-14200025)
chr6 (29-216)||(19139377-19139561)
chr6 (343-408)||(17304944-17305009)
chr6 (218-334)||(12188264-12188380)
chr6 (87-218)||(17304995-17305126)
chr6 (219-334)||(21418470-21418585)
chr6 (219-300)||(3779339-3779420)
chr6 (217-334)||(31622952-31623069)
chr6 (217-333)||(12234469-12234585)
chr6 (219-333)||(15951264-15951378)
chr6 (358-408)||(19139328-19139378)
chr6 (29-116)||(17304746-17304833)
chr6 (218-333)||(33549103-33549218)
chr6 (217-330)||(10338139-10338252)
chr6 (161-218)||(17304686-17304743)
chr6 (219-334)||(1056646-1056761)
chr6 (226-333)||(34444810-34444917)
chr6 (219-333)||(3925744-3925858)
chr6 (220-334)||(6758383-6758497)
chr6 (268-334)||(8597708-8597774)
chr6 (343-408)||(17304635-17304700)
chr6 (248-321)||(20863404-20863477)
chr6 (261-326)||(28363979-28364044)
chr6 (217-333)||(13330085-13330201)
chr6 (218-334)||(24507497-24507613)
chr6 (226-294)||(27989658-27989726)
chr6 (261-300)||(17149580-17149618)
chr6 (249-292)||(23910114-23910157)
chr6 (252-334)||(2484753-2484835)
chr6 (217-295)||(15497037-15497115)
chr6 (227-289)||(27869717-27869778)
chr6 (249-330)||(3172733-3172814)
chr6 (249-294)||(6519171-6519216)
chr6 (250-295)||(12216775-12216820)
chr6 (261-334)||(24256783-24256856)
chr6 (219-291)||(2616476-2616548)
chr6 (242-334)||(11103396-11103488)
chr6 (248-320)||(14278086-14278158)
[»] scaffold0300 (1 HSPs)
scaffold0300 (227-334)||(4348-4455)
[»] scaffold0380 (1 HSPs)
scaffold0380 (48-188)||(9187-9328)
[»] scaffold0122 (1 HSPs)
scaffold0122 (224-334)||(6883-6990)
[»] scaffold0118 (1 HSPs)
scaffold0118 (219-334)||(41594-41709)
[»] scaffold0126 (1 HSPs)
scaffold0126 (236-334)||(25308-25406)
[»] scaffold0101 (1 HSPs)
scaffold0101 (225-326)||(43301-43402)
[»] scaffold0258 (1 HSPs)
scaffold0258 (219-334)||(15284-15399)
[»] scaffold0025 (1 HSPs)
scaffold0025 (101-176)||(26408-26484)
[»] scaffold0009 (1 HSPs)
scaffold0009 (261-331)||(145878-145947)
[»] scaffold0002 (1 HSPs)
scaffold0002 (226-290)||(94976-95040)
[»] scaffold0180 (1 HSPs)
scaffold0180 (230-300)||(19957-20027)
[»] scaffold0238 (1 HSPs)
scaffold0238 (228-333)||(2673-2778)
[»] scaffold0027 (1 HSPs)
scaffold0027 (218-327)||(139865-139974)
[»] scaffold1367 (1 HSPs)
scaffold1367 (226-330)||(805-909)
[»] scaffold0337 (1 HSPs)
scaffold0337 (218-334)||(1752-1868)
[»] scaffold0065 (1 HSPs)
scaffold0065 (218-334)||(12188-12304)
[»] scaffold0194 (1 HSPs)
scaffold0194 (261-320)||(13021-13080)
[»] scaffold0299 (1 HSPs)
scaffold0299 (226-300)||(11535-11609)
[»] scaffold0291 (1 HSPs)
scaffold0291 (261-295)||(2470-2504)
[»] scaffold0072 (1 HSPs)
scaffold0072 (261-334)||(16593-16665)
[»] scaffold0012 (1 HSPs)
scaffold0012 (347-408)||(182679-182739)
[»] scaffold0008 (1 HSPs)
scaffold0008 (248-333)||(49335-49420)
[»] scaffold0021 (1 HSPs)
scaffold0021 (226-330)||(106055-106159)


Alignment Details
Target: chr5 (Bit Score: 110; Significance: 4e-55; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 33123260 - 33123090
Alignment:
Q  46 gaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagtaaagctccgacacaactcagag 145  Q
    |||||||||||| |||||||||| ||| |||||||||||| |||| ||||| |||  |||||||||||||||||||| ||||||||||||| ||||||||    
T  33123260 gaaaatagggtggtttattgatacgaacgaaaatagtaaaatagtagaagagaga--ttctctaactactcccagagcaaagctccgacactactcagag 33123163  T
Q  146 acgaatcctactttagccctaaacagaaaactcaatccgtcatactctaaactcctaagaattcccctttata 218  Q
    | |||||||||| | ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33123162 aggaatcctactctggccctgaacagaaaactcaatctgtcatactctaaactcctaagaattcccctttata 33123090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 22567637 - 22567777
Alignment:
Q  48 aaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagtaaagctccgacacaactcagagac 147  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| |||||| |||||||||||| |||     
T  22567637 aaatagggtgctttattgatatgaatgaaaatagtaaaatagtagaaaagagagattctctaactactcccagagcaaagcttcgacacaactcatagag 22567736  T
Q  148 gaatcctactttagccctaaacagaaaactcaatccgtcat 188  Q
    |||||||||| | ||||| |||||||||||||||| |||||    
T  22567737 gaatcctactctggccctgaacagaaaactcaatctgtcat 22567777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 17028340 - 17028225
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||||| ||||  | |||||||||| |||||||||||| |||||||||||||||| ||||||||||||  ||||||| ||||||    
T  17028340 aacccacttgggttgacctagttgtattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttaggtggg 17028241  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  17028240 ctaatttagcttcttc 17028225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 33123104 - 33123039
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33123104 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 33123039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 22737081 - 22737197
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| ||||||||  ||||||||||  ||||||||||||  ||||||||||| | ||| |||||||||||||||||||||   |||||||| |||||    
T  22737081 aaacccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctccccaatgtctcaggttcgattccctctgatatcaatttaggtgg 22737180  T
Q  318 gctaatttagcttcttc 334  Q
    | |||||||||||||||    
T  22737181 gttaatttagcttcttc 22737197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 25627057 - 25627171
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||||||||||  |||||| ||||| |||||||||||| |||||||||||||||||||||| |||| |  |||||||| | |||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttgag-ggg 25627155  T
Q  319 ctaatttagcttcttc 334  Q
     || ||||||||||||    
T  25627156 ttagtttagcttcttc 25627171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 216 - 334
Target Start/End: Complemental strand, 30883277 - 30883158
Alignment:
Q  216 ataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggt 315  Q
    ||||||||| ||||||||  ||||||||||  ||||||||| || |||||||||||| |||||||||||| |||| |||| | | ||  |||||||||||    
T  30883277 ataaacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctcaccagtgtcaatttgggt 30883178  T
Q  316 gggct-aatttagcttcttc 334  Q
    ||||| |||||||| |||||    
T  30883177 gggctaaatttagcctcttc 30883158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 217 - 334
Target Start/End: Original strand, 16436616 - 16436731
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    ||||| || |||||||| |||||||||||  |||||||||||| |||||||||||| |||||||||||| ||||||||  | | || ||||||||| |||    
T  16436616 taaactcacttgggttggcctagtggtattggcttgggacttg-gagtgtgctcctcctcaaggtctcatgttcgattttcac-agtatcaatttgagtg 16436713  T
Q  317 ggctaatttagcttcttc 334  Q
     ||||||||| |||||||    
T  16436714 agctaatttaacttcttc 16436731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 331
Target Start/End: Complemental strand, 87503 - 87388
Alignment:
Q  215 tataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttggg 314  Q
    |||||||||| || ||||| |||||||||||   ||||| |  || |||||||||||| |||||||||||||||| |||| |||| ||  |||||||| |    
T  87503 tataaacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgatt-cctccagtgtcaatttgag 87405  T
Q  315 tgggctaatttagcttc 331  Q
    |||||||||||||||||    
T  87404 tgggctaatttagcttc 87388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 892550 - 892479
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttc 290  Q
    ||||||||||||||| |||||||||||  ||||||||| | ||||||| ||||| |||||||||||||||||    
T  892550 aacccatttgggttggcctagtggtattggcttgggacctcagagtgtactcctcctcaaggtctcaggttc 892479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 21589288 - 21589403
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| |||||||  ||||||||| || |||| |||| || ||| | ||||||||||||||||||||| |   |||||| ||||||    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaatttaggtggg 21589387  T
Q  319 ctaatttagcttcttc 334  Q
    ||| ||||||||||||    
T  21589388 ctagtttagcttcttc 21589403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 28285293 - 28285367
Alignment:
Q  260 agagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||| ||||||| |||||||| || ||||||||||  |||||  ||||||||||||||||||||||||||||||    
T  28285293 agagtttgctcctcctcaaggtatcgggttcgattctttctagtgtcaatttgggtgggctaatttagcttcttc 28285367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 334
Target Start/End: Original strand, 16773837 - 16773922
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||| || |||||||||||| ||| |||||||||||||||||| ||||     |||||| ||||||||||||||||||||||    
T  16773837 cttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggctaatttagcttcttc 16773922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 43442238 - 43442311
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||| |||||||||||||||||||||| ||||    ||||||||| ||||||||||||| ||||||    
T  43442238 gagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttggatgggctaatttagtttcttc 43442311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 218 - 302
Target Start/End: Complemental strand, 26078128 - 26078044
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctag 302  Q
    ||||||| |||||||| |||||||||||  | |||||||||| |||| |||| ||  ||||||||||||||||||||| ||||||    
T  26078128 aaacccacttgggttggcctagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctctctag 26078044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 29075781 - 29075896
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||  |||||||||||  ||||||||  || |||||||||||| ||| || ||||| ||||||||| |||| |   |||||| | ||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatggg 29075880  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  29075881 ctaatttagcttcttc 29075896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 14285160 - 14285242
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||| |||||||| || ||||| ||  |||||| || || |||||||||||| |||||||||||||||||||||| ||||    
T  14285160 aaacccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctct 14285242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 34984805 - 34984887
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||| ||||||||  ||||||||||  |||||| || || |||||||||||| |||||||||| ||||||||||| ||||    
T  34984805 aaacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctct 34984887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 228 - 334
Target Start/End: Complemental strand, 35796686 - 35796580
Alignment:
Q  228 gggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttag 327  Q
    |||||| |||||||||||  | || ||||||  |||||||||||| |||| | | |||||||||||||||||| |  ||||||| ||| |||||||||||    
T  35796686 gggttggcctagtggtattggttttggacttaggagtgtgctcctcctcatgatttcaggttcgattccctcttgtgtcaatttaggtaggctaatttag 35796587  T
Q  328 cttcttc 334  Q
    | |||||    
T  35796586 catcttc 35796580  T

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Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 18437095 - 18437168
Alignment:
Q  229 ggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctag 302  Q
    ||||| |||||||||||   |||||||||||||||||||||||| ||||| || || |||||||||| ||||||    
T  18437095 ggttggcctagtggtattaacttgggacttgagagtgtgctcctcctcaaagtttcgggttcgattctctctag 18437168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 5390926 - 5390853
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    ||||||||||||||| |||||||||||  ||||||| |||| ||  |||||||| ||| |||||||||||||||||    
T  5390926 aacccatttgggttggcctagtggtattggcttggggcttggga--gtgctcctcctcgaggtctcaggttcgatt 5390853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 12877724 - 12877808
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||| ||| ||||||| | || ||||| |||||||||||||||| |||| | |  ||||| ||||||||||||||||||||||    
T  12877724 ttgggatttgggagtgtgtttctcctcaatgtctcaggttcgattctctctggtactaatttaggtgggctaatttagcttcttc 12877808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 29173532 - 29173604
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||||| ||| |||| ||||||||||||  |||| |  ||||||| |||||||||||||||||||||    
T  29173532 gagtgtgctcctcctcgaggtttcaggttcgattatctctggtgtcaatttaggtgggctaatttagcttctt 29173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 21549213 - 21549138
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||||| |||||||| |||||||||||  ||||||||| || |||||||||||| || || |||||| ||||||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgatt 21549138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 30109388 - 30109270
Alignment:
Q  215 tataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttggg 314  Q
    |||||||||| |||||||| | | |||||||  ||||| ||| || |||||||||||| ||  |||||||||||||||||||| |  |    ||||| ||    
T  30109388 tataaacccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgattccc-ccggtgctaatttagg 30109290  T
Q  315 tgggctaatttagcttcttc 334  Q
    ||||||||||||||||||||    
T  30109289 tgggctaatttagcttcttc 30109270  T

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Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 35705042 - 35705101
Alignment:
Q  275 tcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||||||||||||||| | |  |  ||||||||||||||||||||||||||||||    
T  35705042 tcaaggtctcaggttcgattctccccggtgtcaatttgggtgggctaatttagcttcttc 35705101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 7918545 - 7918464
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||| |||||||| |||||||||||  |||||| || || |||||  ||||| |||||||||| ||||||||||| ||||    
T  7918545 aacccacttgggttggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctct 7918464  T

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Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 39327137 - 39327053
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||| || |||||||||||| |||||||||| || |||||||| ||| |  |  ||||| |||||||||||||||||||||    
T  39327137 gcttgggacatgggagtgtgctcctcctcaaggtcttagcttcgattctctccaatactaattt-ggtgggctaatttagcttctt 39327053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 334
Target Start/End: Complemental strand, 22020931 - 22020823
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| | |||||||||  ||||||||  || |||||||||||| ||  | ||||||| |||||||| ||| ||  | ||||| |||||||||||||    
T  22020931 ttgggttggcatagtggtattagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctccagtgttaatttaggtgggctaattt 22020832  T
Q  326 agcttcttc 334  Q
    || ||||||    
T  22020831 agtttcttc 22020823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 27841052 - 27840980
Alignment:
Q  262 agtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||||| ||| || |||| |||||||||| |||| |  | ||||||| ||||||||||||||||||||    
T  27841052 agtgtgctcctcctcgagatctccggttcgattctctctggtgttaatttggatgggctaatttagcttcttc 27840980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 29210400 - 29210472
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||||| ||| |||| ||| |||| |||| |||| | |||||||| ||||| |||||||||||||||    
T  29210400 gagtgtgctcctcctcgaggtttcaagttcaattctctctggtatcaatttaggtggactaatttagcttctt 29210472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 37258400 - 37258328
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||||| |||||||| ||||||||||||| |||| |  |||||||| | ||| || |||||||||||    
T  37258400 gagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaatttgagggggttagtttagcttctt 37258328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 19043458 - 19043529
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttc 290  Q
    |||||| |||||||| ||||||| |||   ||||| ||||| ||||||| |||||||||| |||||||||||    
T  19043458 aacccacttgggttggcctagtgctattgacttggaacttgggagtgtgttccttctcaaagtctcaggttc 19043529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 40461690 - 40461619
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggtt 289  Q
    ||||||| ||||||||  || |||||||   |||| |||||||||||||||| || ||||||||||||||||    
T  40461690 aaacccacttgggttgatctggtggtattaacttgagacttgagagtgtgcttctcctcaaggtctcaggtt 40461619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 1279034 - 1279104
Alignment:
Q  262 agtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttct 332  Q
    |||||||||||  || |||||||| ||| ||||| |||| |  ||||||||||||| ||||||||||||||    
T  1279034 agtgtgctcctcatcgaggtctcaagttagattctctctggtgtcaatttgggtggactaatttagcttct 1279104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 5156159 - 5156090
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagctt 330  Q
    ||||||||| ||||| |||||||||| |||||||| |||| |  |||||||| | ||| |||||||||||    
T  5156159 gagtgtgcttcttctgaaggtctcagattcgattctctctggtgtcaatttgagagggttaatttagctt 5156090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 334
Target Start/End: Original strand, 10054109 - 10054162
Alignment:
Q  281 tctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||||||||| |||    ||||| |||||||||||||||||||||||||    
T  10054109 tctcaggttcgattctctccgatatcaacttgggtgggctaatttagcttcttc 10054162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 297
Target Start/End: Complemental strand, 15485466 - 15485418
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccc 297  Q
    ||||||||| |  |||||||||||| ||||||||||||||||||||||||    
T  15485466 gcttgggaccttggagtgtgctcct-ctcaaggtctcaggttcgattccc 15485418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 25979199 - 25979284
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||| | ||| |||||| ||||| |||||||||||||||||||||| ||||    ||||||||   ||| ||||||||||||||    
T  25979199 gcttggaatttgggagtgttctcctcctcaaggtctcaggttcgattctctcttatgtcaatttgatggggttaatttagcttctt 25979284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 7085772 - 7085728
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    ||||||| |||||||||||||||||  ||||||| ||||||||||    
T  7085772 aggtctccggttcgattccctctagtgtcaatttcggtgggctaa 7085728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 16457810 - 16457886
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||| || ||||| ||| |||||||  ||||||||| |  |||||||||||| |||||||||||| |||| ||||    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattc 16457886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 18206680 - 18206608
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||||| ||  ||||  ||| ||||| || ||||||   ||||||||||||||||||||||||||||    
T  18206680 gagtgtgctcctcctttaggttccagattcgactctctctagtgccaatttgggtgggctaatttagcttctt 18206608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 103; Significance: 6e-51; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 32 - 221
Target Start/End: Complemental strand, 19492445 - 19492256
Alignment:
Q  32 agatggtaattaaggaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagtaaagctcc 131  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||| ||||| | ||||||||||||||||||||| | ||||||||    
T  19492445 agatggtaattaaagaaaatagggtgctttattgatatga-tgagaatagtaaaatagtagaagagaaagtttctctaactactcccagtgcaaagctcc 19492347  T
Q  132 gacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactct-aaactcctaagaattcccctttataaac 221  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||   |||||  || ||| |||||||| |||||||||||||| ||||    
T  19492346 gacacaactcagagaggaatcctactctagccctaaacagaaaacttgttccgttgtattctaaaactcctgagaattcccctttaaaaac 19492256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 6122793 - 6122909
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  6122793 aaacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgg 6122892  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  6122893 gctaatttagcttcttc 6122909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 31794340 - 31794225
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||||||||||  |||||||||||| |||||||||||| ||||||||||   |||||||||||||| |  ||||||||||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctagagttcgattccctctggtgtcaatttgggtggg 31794241  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  31794240 ctaatttagcttcttc 31794225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 10526823 - 10526938
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||||||||||||  | ||||||||  ||||||||| || |||| ||||||| ||||||||||||| |||||||| |||| |  ||||||||||||||    
T  10526823 aacccatttgggttggtccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctggagtcaatttgggtggg 10526922  T
Q  319 ctaatttagcttcttc 334  Q
     |||||||||||||||    
T  10526923 ttaatttagcttcttc 10526938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 44961785 - 44961879
Alignment:
Q  239 gtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||  ||||| || || ||||||||||||| |||| ||||||||||||||||| ||||||  |||||||||||||||||||||||||||||    
T  44961785 gtggtattagcttgagatttaagagtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaatttgggtgggctaatttagcttctt 44961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 219 - 333
Target Start/End: Complemental strand, 52116857 - 52116743
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| |||||||  |||||||||||| |||||||||||| ||||| ||||||||||| |||| | ||||   |||||  ||||||    
T  52116857 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgccaattaaggtggg 52116758  T
Q  319 ctaatttagcttctt 333  Q
    |||||||||||||||    
T  52116757 ctaatttagcttctt 52116743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 19492273 - 19492208
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    ||||||||||||| | ||||||||||||||||||||||||||| || ||| |||||||||||||||    
T  19492273 gaattcccctttaaaaacaaataaagagaacattctagtattttaccctattgggcctcttattat 19492208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 8177259 - 8177143
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||||||| |||| |||||||||||  ||||||||  || |||||||||||| |||||||| ||||||||||||| |||| |   ||||||| | ||    
T  8177259 aaacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgagggg 8177160  T
Q  318 gctaatttagcttcttc 334  Q
    | || ||||||||||||    
T  8177159 gttagtttagcttcttc 8177143  T

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Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 302
Target Start/End: Original strand, 11063555 - 11063639
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctag 302  Q
    ||||||||||||||||  ||||||||||  ||||||||| ||| |||||| |||| |||||||||| ||||||||||| ||||||    
T  11063555 aaacccatttgggttgatctagtggtattggcttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctctctag 11063639  T

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Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 334
Target Start/End: Complemental strand, 17745325 - 17745218
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| |||||||||||  ||||||||| |||| |||||||||| ||| |||||||| ||||||||| |||| |  ||||||| ||| || ||||||    
T  17745325 ttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaatttaggt-ggttaattt 17745227  T
Q  326 agcttcttc 334  Q
    |||||||||    
T  17745226 agcttcttc 17745218  T

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Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 51814533 - 51814605
Alignment:
Q  258 tgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagctt 330  Q
    ||||||||||||||| |||||||||||||||||||||| |||  |   |||||||||||||||||||||||||    
T  51814533 tgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggctaatttagctt 51814605  T

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Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 36371469 - 36371551
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||| |||||||| |||||||||||  |||||| || || |||||||||||| |||||||||| ||||||||||| ||||    
T  36371469 aaacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctct 36371551  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 216 - 334
Target Start/End: Original strand, 40257396 - 40257514
Alignment:
Q  216 ataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggt 315  Q
    ||||||||| |||||||| ||| |||||||  ||||| ||| || |||||||||||| ||| |||||||| |||| ||||  ||  |  |||||||||||    
T  40257396 ataaacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggt 40257495  T
Q  316 gggctaatttagcttcttc 334  Q
    |||||| ||||||||||||    
T  40257496 gggctagtttagcttcttc 40257514  T

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Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 4566544 - 4566629
Alignment:
Q  215 tataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||||||| |||||||| ||||||| |||  |||||| || || |||||||||||| |||| ||||||||||||||||| ||||    
T  4566544 tataaacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctct 4566629  T

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Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 9165271 - 9165190
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||| |||||||| |||||||||||  ||||||||| || |||||||||||| ||||| ||||||||||| |||| ||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctct 9165190  T

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Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 408
Target Start/End: Original strand, 17981583 - 17981643
Alignment:
Q  347 tcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    ||||||||||||||||||||||||||| || |||||| |||| |||||||||||||||||||    
T  17981583 tcccctttatatacaaataaagagaactttatagtatataac-ctaatgggcctcttattat 17981643  T

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Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 334
Target Start/End: Original strand, 2799878 - 2799977
Alignment:
Q  235 cctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||| ||||| ||  || |||||||||||| |||||||||||||||||||||| |||| |   ||||||| | ||| || ||||||||||||    
T  2799878 cctagtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagtttagcttcttc 2799977  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 16893394 - 16893509
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||  ||||||  ||||| || ||| |||||| ||||| ||| |||||||||||||||||  |||  |  |||||||| |||||    
T  16893394 aacccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtggg 16893493  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  16893494 ctaatttagcttcttc 16893509  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 33700847 - 33700768
Alignment:
Q  221 cccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||| |||||||| |||||||||||  |||||| |  || |||||||||||| |||||||||||||||||||||| ||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctct 33700768  T

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Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 8904410 - 8904495
Alignment:
Q  215 tataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||||||| |||||||| |||||| ||||   |||||||  || |||||||||||| |||||||||||| ||||||||| ||||    
T  8904410 tataaacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctct 8904495  T

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Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 217 - 334
Target Start/End: Complemental strand, 21547558 - 21547441
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||| | |||||||| |||||||||||  ||||||||| || ||| |||||||| ||| |||| ||||||||||||| ||||     |||||| ||||    
T  21547558 taaaccgacttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaatttaggtg 21547459  T
Q  317 ggctaatttagcttcttc 334  Q
    ||||| |||| |||||||    
T  21547458 ggctagtttaacttcttc 21547441  T

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Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 6650594 - 6650710
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| || ||||| |||||||||||  ||||||||   | |||| ||||||| ||||| |||||||||||||||| |||| |  ||||||| |||||    
T  6650594 aaacccaattaggttggcctagtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaatttaggtgg 6650693  T
Q  318 gctaatttagcttcttc 334  Q
      || ||||||||||||    
T  6650694 attagtttagcttcttc 6650710  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 334
Target Start/End: Complemental strand, 14787401 - 14787297
Alignment:
Q  230 gttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagct 329  Q
    |||| |||||||||||   |||| ||| |||||||||| | || |||||||| ||||||||||||| |||||  ||||||||  ||||| || |||||||    
T  14787401 gttgacctagtggtattgacttgagacctgagagtgtgtttctcctcaaggtgtcaggttcgattctctctaatatcaatttaagtgggttagtttagct 14787302  T
Q  330 tcttc 334  Q
    |||||    
T  14787301 tcttc 14787297  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 15064999 - 15065079
Alignment:
Q  253 ggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||| ||||||||||||| | ||||||||||||||||| |||  | |  |  |||||||||||||||||||||||||||||    
T  15064999 ggacctgagagtgtgctcatcctcaaggtctcaggttcaattttccccggtgtcaatttgggtgggctaatttagcttctt 15065079  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 19528403 - 19528327
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||| |||||||| ||| |||||||  ||||||||  |  |||||||||||| ||||||||||||||||||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattc 19528327  T

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Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 21392867 - 21392911
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgat 293  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  21392867 cttgggacttaagagtgtgctcctcctcaaggtctcaggttcgat 21392911  T

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Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 25297771 - 25297887
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| ||||||||  ||||||||||   ||| |||  ||||||||||||||| ||| |||||| ||||| ||||| | |  || ||||||| |||||    
T  25297771 aaacccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtctgaggtttgattctcaccggcgtcaatttaggtgg 25297870  T
Q  318 gctaatttagcttcttc 334  Q
    | |||||||||||||||    
T  25297871 gataatttagcttcttc 25297887  T

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Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 311
Target Start/End: Original strand, 51703779 - 51703871
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaattt 311  Q
    |||||||||||||||  ||||||||||  |||||| |  || |||||||||||| ||||| || ||||||||||||| |||| | ||||||||    
T  51703779 aacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctctggtatcaattt 51703871  T

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Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 52336839 - 52336743
Alignment:
Q  230 gttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattta 326  Q
    |||| |||||||||||  ||||||||  || |||||||||||| || ||| ||||||||||||||  |||| |  ||||||||| ||||||||||||    
T  52336839 gttggcctagtggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctggtgtcaatttggatgggctaattta 52336743  T

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Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 3265954 - 3266005
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||| ||||    
T  3265954 cttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctct 3266005  T

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Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 7219962 - 7219879
Alignment:
Q  251 tgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||| ||||||||||||||| ||| | |||||||||||||||| || |   | |||||| ||||| ||||||||||||||||    
T  7219962 tgggacatgagagtgtgctcctcctcgaagtctcaggttcgattctctttgataccaatttaggtggactaatttagcttcttc 7219879  T

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Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 219 - 333
Target Start/End: Original strand, 50901581 - 50901695
Alignment:
Q  219 aacccatttgggttgccctagtggta-tacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    |||||| |||||||| |||||||||| |  ||||||||| ||  ||||||||||| ||| ||||||||  |||||||| ||| ||   |||||| |||||    
T  50901581 aacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctc-agtgccaatttaggtgg 50901679  T
Q  318 gctaatttagcttctt 333  Q
    ||||||||||||||||    
T  50901680 gctaatttagcttctt 50901695  T

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Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 334
Target Start/End: Complemental strand, 21268076 - 21267954
Alignment:
Q  212 ctttataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaattt 311  Q
    |||| |||||||| ||| ||||  ||||| ||||  |||||||||||| |||||||||||| ||| ||||||  |||| ||||| |||| |   ||||||    
T  21268076 ctttttaaacccacttgagttgggctagtagtattggcttgggacttgggagtgtgctcctcctctaggtcttgggtttgattctctctggttccaattt 21267977  T
Q  312 gggtgggctaatttagcttcttc 334  Q
       ||||||||||||||||||||    
T  21267976 ttttgggctaatttagcttcttc 21267954  T

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Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 21694446 - 21694519
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||| |||||||| ||| |||||||  ||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  21694446 aacccacttgggttgacctggtggtattggcttgagacttgggagtgtgctc---ctcaaggtctcaggttcgattc 21694519  T

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Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 334
Target Start/End: Original strand, 44126396 - 44126510
Alignment:
Q  220 acccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggc 319  Q
    ||||| |||||||| ||| |||||||   | |||||| || |||||||||||| | | ||||||||| || ||||| ||||||   |||||| ||| |||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaatttaggtaggc 44126495  T
Q  320 taatttagcttcttc 334  Q
    |||||||||||||||    
T  44126496 taatttagcttcttc 44126510  T

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Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 48391379 - 48391293
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||| |||||||||| |||||||  ||||||| |||| ||||||||| ||| |  | ||||||| |||| |||||||||||||||    
T  48391379 gcttggaacttgagagtttgctcctcatcaaggtttcagattcgattccttctggtgttaatttggatgggttaatttagcttcttc 48391293  T

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Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 52029971 - 52029937
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||||||||||||||||||||||||||||||||    
T  52029971 gagtgtgctccttctcaaggtctcaggttcgattc 52029937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 3799951 - 3800020
Alignment:
Q  264 tgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||| ||| | || ||||||||||||| ||||||   |||||| |||||||||||||||||||||    
T  3799951 tgtgctcctcctcgaagtttcaggttcgattctctctagtgccaatttaggtgggctaatttagcttctt 3800020  T

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Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 226 - 295
Target Start/End: Complemental strand, 15786389 - 15786320
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||||  ||||| ||||  ||||||||  || |||||||||||| ||||||||||||||||||||||    
T  15786389 ttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattc 15786320  T

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Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 249 - 334
Target Start/End: Original strand, 36124863 - 36124948
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||| ||||||||||||||| ||  |||||||| ||| ||| |   |||||  |||||| ||||||||||||||||||||||    
T  36124863 cttgggacctgagagtgtgctcctccttgaggtctcaagtttgatccttcctagcgccaatttaggtgggctaatttagcttcttc 36124948  T

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Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 38947513 - 38947472
Alignment:
Q  254 gacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  38947513 gacttgggagtgtgctcctcctcaaggtctcaggttcgattc 38947472  T

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Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 219 - 312
Target Start/End: Original strand, 42787208 - 42787301
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttg 312  Q
    |||||| || ||||| |||||||||||   ||||||||||||||||| | |||| ||||| ||||||| ||||| || ||||||  ||||||||    
T  42787208 aacccagttaggttggcctagtggtattgacttgggacttgagagtgcgttcctcctcaaagtctcagattcgagtctctctagtgtcaatttg 42787301  T

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Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 326
Target Start/End: Original strand, 19088216 - 19088316
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| |||||||||||  || || || |||||| ||| ||||| |||||||| | ||||||||||| |||| |  | |||||| ||||||||||||    
T  19088216 ttgggttggcctagtggtattggcctgagatttgagattgtactcctcctcaaggttttaggttcgattcactctggtgttaatttgagtgggctaattt 19088315  T
Q  326 a 326  Q
    |    
T  19088316 a 19088316  T

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Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 51281394 - 51281466
Alignment:
Q  262 agtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||||| |||||||||||||||| ||||| |||  ||  ||||||||||  |||| ||||||||||||    
T  51281394 agtgtgctcctcctcaaggtctcaggtttgattctctccggcgccaatttgggtaagctagtttagcttcttc 51281466  T

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Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 2219972 - 2220087
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| ||||||||  || |||||||  |||||| || ||| |||||||| || ||| |||||||||||||||||| ||| |   |||||||   ||||    
T  2219972 aacccacttgggttgttctggtggtattggcttggaacctgaaagtgtgcttctcctcgaggtctcaggttcgattctctccaatgtcaatttaaatggg 2220071  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||| ||||||    
T  2220072 ctaatttagtttcttc 2220087  T

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Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 333
Target Start/End: Complemental strand, 10150914 - 10150831
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||| |||||| ||||| ||||| ||||||||||| |||| |||  |  ||| |||| |||| |||||||||||||||    
T  10150914 ttgggacttgggagtgtactcctcctcaaagtctcaggttcaattctctcaggtgtcagtttgagtggactaatttagcttctt 10150831  T

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Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 21184446 - 21184391
Alignment:
Q  237 tagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcga 292  Q
    |||||||||  ||||||||| || ||||||||||||||| ||||||||| ||||||    
T  21184446 tagtggtattggcttgggacctgcgagtgtgctccttctgaaggtctcaagttcga 21184391  T

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Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 333
Target Start/End: Original strand, 41508830 - 41508945
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| ||| ||||||   | ||||||  || |||||||||||| ||||||||||||| ||  ||||| ||  |  |||| ||| ||||    
T  41508830 aaacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtctcagatttaattccatccggtgtcaacttgagtgg 41508929  T
Q  318 gctaatttagcttctt 333  Q
    ||||||||||||||||    
T  41508930 gctaatttagcttctt 41508945  T

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Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 4280497 - 4280451
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||||||||||||||||| || || ||||||||||||| |||||    
T  4280497 cttgggacttgagagtgtgcttctcctgaaggtctcaggtttgattc 4280451  T

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Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 319
Target Start/End: Complemental strand, 25237140 - 25237094
Alignment:
Q  273 tctcaaggtctcaggttcgattccctctagcatcaatttgggtgggc 319  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||    
T  25237140 tctcaaggtctcaggttcgattccctctagtgccaatttcggtgggc 25237094  T

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Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 36342426 - 36342472
Alignment:
Q  106 tctaactactcccagagtaaagctccgacacaactcagagacgaatc 152  Q
    |||| ||| |||||||| ||||||||||||||||||||||| |||||    
T  36342426 tctagctaatcccagagcaaagctccgacacaactcagagaggaatc 36342472  T

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Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 1600326 - 1600253
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||| || || || ||||||||||||| |||| |  ||||||||| ||| |||| |||||||||||    
T  1600326 gagtgtgctcctccttaaagtttcaggttcgattctctctggtgtcaatttggatggactaacttagcttcttc 1600253  T

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Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 27430126 - 27430195
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||||  ||||||||| |  ||||||| | | |||| ||| |||||||||||||||||||||||||||    
T  27430126 ttgggttcgcctagtggtgttggcttgggtccttagagcgtgttccttctcaaggtctcaggttcgattc 27430195  T

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Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 27476818 - 27476733
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||||  |||||||||||| ||| || ||||| ||| ||||| |||| |   | |||| |||||||||||||||||||||    
T  27476818 gcttgggacttaggagtgtgctcctcctcgagatctcaagtttgattctctctggtgccgatttaggtgggctaatttagcttctt 27476733  T

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Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 35187917 - 35187970
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctc 270  Q
    |||| |||||||||||| |||||||||||   ||||| ||||||||||||||||    
T  35187917 taaatccatttgggttggcctagtggtattgacttggaacttgagagtgtgctc 35187970  T

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Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 39964505 - 39964585
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||| |||||||||| ||||| ||| |  ||||| ||| |  |||||||||||| |||||||||||||||| ||||||||||    
T  39964505 aaccaatttgggttggcctagaggtgttggcttgcgaccttggagtgtgctcct-ctcaaggtctcaggtttgattccctct 39964585  T

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Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 40087993 - 40087948
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||| |||||||||||||||||||||||||||| ||  ||||||||    
T  40087993 ttggaacttgagagtgtgctccttctcaaggtcccaaattcgattc 40087948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 40814442 - 40814373
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagctt 330  Q
    |||||||||| | ||  |||| ||||||||||||| ||||||  |||||||  |||||||||||||||||    
T  40814442 gagtgtgctcatccttgaggtttcaggttcgattctctctagtgtcaatttaagtgggctaatttagctt 40814373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 1247155 - 1247227
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||| ||||| |||||||||||||||||||||| |||| | | |||||||   ||| || |||||||||||    
T  1247155 gagtgtactcctcctcaaggtctcaggttcgattctctctggtaccaatttgaaggggttattttagcttctt 1247227  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 16170054 - 16169978
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||| |||||||  ||| |||||||   |||||||| || ||||||| |||| |||||||| |||||||||||||    
T  16170054 aacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggtttcaggttcgattc 16169978  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 33905656 - 33905616
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    ||||||||||||||||||||||| | |||||||| ||||||    
T  33905656 aggtctcaggttcgattccctctggtatcaatttcggtggg 33905616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 46113548 - 46113504
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    ||||||||||||||||||||||| | | |||||| ||||||||||    
T  46113548 aggtctcaggttcgattccctctggtaccaatttcggtgggctaa 46113504  T

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Target: chr2 (Bit Score: 102; Significance: 2e-50; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 33523799 - 33523969
Alignment:
Q  46 gaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagtaaagctccgacacaactcagag 145  Q
    |||||||||||| |||||||||||||| |||||||||||| |||| ||||| |||  ||||||||||||||| |||| ||| |||||| | |||||||||    
T  33523799 gaaaatagggtggtttattgatatgaacgaaaatagtaaaatagtagaagagaga--ttctctaactactcctagagcaaaactccgaaataactcagag 33523896  T
Q  146 acgaatcctactttagccctaaacagaaaactcaatccgtcatactctaaactcctaagaattcccctttata 218  Q
    | |||||||||| | |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  33523897 aggaatcctactctggccctaaacaaaaaactcaatctgtcatactctaaactcctaagaattcccctttata 33523969  T

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Target: chr2; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 21195753 - 21195638
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||  ||||||||| |||    
T  21195753 aaacccatttgggttgccctagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgg 21195654  T
Q  318 gctaatttagcttctt 333  Q
    ||||||||||||||||    
T  21195653 gctaatttagcttctt 21195638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 12511761 - 12511904
Alignment:
Q  23 agaagtaacagatggtaattaaggaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagag 122  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||        ||||| |||||||| ||||||||||| ||||    
T  12511761 agaagaaacagatggtaattaaggaaaatagggtgttttattgatacgaatgaaaatagta--------gaagagagagtttccctaactactcctagag 12511852  T
Q  123 taaagctccgacacaactcagagacgaatcctactttagccctaaacagaaa 174  Q
     ||||||||||||||||||||||| |||||||||| | ||| | ||||||||    
T  12511853 caaagctccgacacaactcagagaggaatcctactctggccttgaacagaaa 12511904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 21001174 - 21001008
Alignment:
Q  48 aaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagtaaagctccgacacaactcagagac 147  Q
    |||||||||||||||||||||  || |||||| || || |||| | ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||     
T  21001174 aaatagggtgctttattgatagtaa-gaaaatggtgaaatagtagtagagagagtttctctaactactccctgagcaaagctccgacacaactcagagag 21001076  T
Q  148 gaatcctactttagccctaaacagaaaactcaatccgtcatactc-taaactcctaagaattccccttta 216  Q
    |||||||||| | ||||| ||||||||||| | || ||||| ||| ||||||||||||||||||||||||    
T  21001075 gaatcctactctggccct-aacagaaaacttattctgtcat-ctcttaaactcctaagaattccccttta 21001008  T

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Target: chr2; HSP #5
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 33523955 - 33524020
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33523955 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 33524020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 98 - 196
Target Start/End: Original strand, 21212406 - 21212504
Alignment:
Q  98 agagtttctctaactactcccagagtaaagctccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactctaaa 196  Q
    |||||||||||||||||||||||||  ||||||||| |||||| ||||| |||||||||| | ||||||||||||||||| | ||||||||||||||||    
T  21212406 agagtttctctaactactcccagagcgaagctccgatacaacttagagaggaatcctactctggccctaaacagaaaacttattccgtcatactctaaa 21212504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 216 - 334
Target Start/End: Original strand, 42602551 - 42602669
Alignment:
Q  216 ataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggt 315  Q
    ||||||||| |||||||| |||||||||||  ||||||||| || ||||||||||||||||||||||| ||||| ||||| |||  |   ||||||||||    
T  42602551 ataaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggt 42602650  T
Q  316 gggctaatttagcttcttc 334  Q
    |||||||||||||||||||    
T  42602651 gggctaatttagcttcttc 42602669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 37480074 - 37480190
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| ||| |||||||  ||||||||| ||||||||||||||| |||||||||||||||||||||| | |  |   ||||||||||||    
T  37480074 aaacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtgg 37480173  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  37480174 gctaatttagcttcttc 37480190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 29 - 119
Target Start/End: Original strand, 24195373 - 24195463
Alignment:
Q  29 aacagatggtaattaaggaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactccca 119  Q
    |||| ||| ||||||||||||||||| ||||||||||||| |||||||||||||||| |||| ||||  ||||||||||||||||||||||    
T  24195373 aacaaatgataattaaggaaaataggatgctttattgatacgaatgaaaatagtaaaatagtagaagtgagagtttctctaactactccca 24195463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 219 - 333
Target Start/End: Complemental strand, 42327471 - 42327357
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||||||||||  ||||||||| || |||||||||||| |||||||||||||||||||||| ||   |   |||||||||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtggg 42327372  T
Q  319 ctaatttagcttctt 333  Q
    |||||||||| ||||    
T  42327371 ctaatttagcatctt 42327357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 23052599 - 23052484
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| || ||||| ||| |||||||  |||||||||||| ||||||||| || |||||||||||||||||||||| | ||||   || ||||||||||    
T  23052599 aacccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgccagtttgggtggg 23052500  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||| ||||||    
T  23052499 ctaatttagtttcttc 23052484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 218 - 330
Target Start/End: Original strand, 39714991 - 39715103
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| | | |||||||   |||||||| || |||||||||||| ||| |||||||||||||||||| | | |||| |||||| |||||    
T  39714991 aaacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagcaccaatttaggtgg 39715090  T
Q  318 gctaatttagctt 330  Q
    |||||||||||||    
T  39715091 gctaatttagctt 39715103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 1435064 - 1435178
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| | ||||||||   |||||||| ||  ||||||||| || ||||||||||||| |||||||| |||| |  ||||||||||||||    
T  1435064 aacccacttgggttggcatagtggtactggcttgggatttaggagtgtgcttctcctcaaggtctcag-ttcgattctctctggtgtcaatttgggtggg 1435162  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  1435163 ctaatttagcttcttc 1435178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 216 - 295
Target Start/End: Original strand, 29503268 - 29503347
Alignment:
Q  216 ataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||||| |||||||| |||||||||||  | ||||||| || |||||||||||| ||||||||||||||||||||||    
T  29503268 ataaacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattc 29503347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 219 - 332
Target Start/End: Original strand, 19244109 - 19244222
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| ||||||||  ||| ||||||   |||||||| ||||||||||||||| | |||||||||||||||||||| |||| |   ||||||| |||||    
T  19244109 aacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaatttgagtggg 19244208  T
Q  319 ctaatttagcttct 332  Q
    ||||||||| ||||    
T  19244209 ctaatttagtttct 19244222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 217 - 334
Target Start/End: Complemental strand, 34041666 - 34041549
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||||| |||||||| |||||||||||   ||| |||  ||||||||||||||| |||||||||||||||| |||||||||| |   ||||||| | |    
T  34041666 taaacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgattccctctggtgccaatttgaggg 34041567  T
Q  317 ggctaatttagcttcttc 334  Q
    || || ||||||||||||    
T  34041566 ggttagtttagcttcttc 34041549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 11251086 - 11251194
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| || ||||| | |||||||||  ||||||||||||  ||||||||||| |||||||||||||||| ||||| |||| |  ||||||| ||||     
T  11251086 aaacccacttaggttggcttagtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctggtgtcaatttaggtgt 11251185  T
Q  318 gctaattta 326  Q
    |||||||||    
T  11251186 gctaattta 11251194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 33582004 - 33582088
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||| ||||||||||||||| ||  |||||||||||||||||| |||||   ||||||| ||||| ||||||||||||||||    
T  33582004 ttgggacctgagagtgtgctcctccttgaggtctcaggttcgattctctctaatgtcaatttaggtggactaatttagcttcttc 33582088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 334
Target Start/End: Complemental strand, 4060292 - 4060175
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||||| |||||||| |||||||||||  | |||  || |||||||||||| || |||||| ||||||||||||||| |||| |  |||||||| | |    
T  4060292 taaacccacttgggttggcctagtggtattggtttgaaacctgagagtgtgcttctcctcaagatctcaggttcgattctctctggtgtcaatttgaggg 4060193  T
Q  317 ggctaatttagcttcttc 334  Q
    || || ||||||||||||    
T  4060192 ggttagtttagcttcttc 4060175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 23055370 - 23055305
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    |||||| |||||| ||||||||||||||||||||||| |||||||| |||| || |||||||||||    
T  23055370 gaattctcctttacatacaaataaagagaacattctattatttaaccctaacggccctcttattat 23055305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 7799112 - 7798997
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| ||| |||||||  |||||||||||| |||||||||||| ||| || |||||| |||||||| ||| ||   ||||||  || |    
T  7799112 aaacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaatttaagt-g 7799014  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  7799013 gctaatttagcttcttc 7798997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 23055732 - 23055796
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttatta 407  Q
    |||||| |||||| |||||||||||||||| |||||| | |||||| ||||||||||||||||||    
T  23055732 gaattctcctttagatacaaataaagagaagattctattgtttaaccctaatgggcctcttatta 23055796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 230 - 333
Target Start/End: Complemental strand, 12086194 - 12086091
Alignment:
Q  230 gttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagct 329  Q
    |||| ||| |||||||  ||||||||| ||  ||||||||||| ||||||||||| ||||||||||||||  |    ||||| |||||||||||||||||    
T  12086194 gttggcctggtggtattggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattccctccggtgctaatttaggtgggctaatttagct 12086095  T
Q  330 tctt 333  Q
    ||||    
T  12086094 tctt 12086091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 13803495 - 13803570
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||||||||||||||  |||||| |||  ||||| |||||  |||||||||||| |||||||||||||||||||||    
T  13803495 aacccatttgggttgatctagtgatattggcttgagacttaggagtgtgctcctcctcaaggtctcaggttcgatt 13803570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 343 - 381
Target Start/End: Complemental strand, 49455 - 49417
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagt 381  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49455 gaattcccctttatatacaaataaagagaacattctagt 49417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 220 - 334
Target Start/End: Complemental strand, 37756046 - 37755932
Alignment:
Q  220 acccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggc 319  Q
    ||||| |||||||| | | |||||||  ||||||||| || || ||||||||| ||| |||||||| |||||| |||||||     ||||||| ||||||    
T  37756046 acccacttgggttggcttggtggtattggcttgggacctgggaatgtgctcctactcgaggtctcaagttcgactccctctgatgccaatttgagtgggc 37755947  T
Q  320 taatttagcttcttc 334  Q
    |||||||||||||||    
T  37755946 taatttagcttcttc 37755932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 42922414 - 42922496
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctc-aaggtctcaggttcgattccctct 300  Q
    |||||| |||||||| |||||||||||  |||||| || || |||||||||||| ||| ||||||||||||||||||| ||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctct 42922496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 11062360 - 11062441
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||| |||||||| ||||||| |||  |||||| ||||| ||||||||| || |||||||||||||||| ||||| ||||    
T  11062360 aacccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctct 11062441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 16131739 - 16131670
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcagg 287  Q
    ||||||||||||||||| | ||||||||| |||||  ||| |||||||||||||| |||||||| |||||    
T  16131739 aaacccatttgggttgctccagtggtataggcttgaaactggagagtgtgctcctcctcaaggtttcagg 16131670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 21001020 - 21000955
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    ||||||||||||| ||||| ||| ||||||||||||| |||||||| |||| |||||| |||||||    
T  21001020 gaattcccctttacatacagatagagagaacattctattatttaaccctaacgggccttttattat 21000955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 1729809 - 1729897
Alignment:
Q  212 ctttataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||| |||||||| ||||||||  ||||||||||  |||||||||||| |||||||||||| ||| |||||| || || ||||| ||||    
T  1729809 ctttttaaacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattctctct 1729897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 396
Target Start/End: Original strand, 21212518 - 21212566
Alignment:
Q  348 cccctttatatacaaataaagagaacattctagtatttaactctaatgg 396  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||||    
T  21212518 cccctttatatacaaataaagataacattctagtatataaccctaatgg 21212566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 330
Target Start/End: Original strand, 39764992 - 39765044
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagctt 330  Q
    |||||||||||||||||||||||||  ||||||| | ||||||||||||||||    
T  39764992 aggtctcaggttcgattccctctagtgtcaatttagctgggctaatttagctt 39765044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 4439055 - 4438940
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||| ||||||   |||||||  ||||||||||||||| ||||||||| || |||||||||  ||| | | ||||||| | |||    
T  4439055 aacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctcaaggtcgcatgttcgattctttctggtaccaatttgagaggg 4438956  T
Q  319 ctaatttagcttcttc 334  Q
     || ||||||||||||    
T  4438955 ttagtttagcttcttc 4438940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 218 - 333
Target Start/End: Original strand, 14500276 - 14500391
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||| ||| |||||||||||| ||||| ||  || |||||||||||| ||| ||||||||| |||||||| |||| |   ||||||| | ||    
T  14500276 aaacccacttggtttggcctagtggtataagcttgagatctgggagtgtgctcctcctctaggtctcagattcgattctctctggtgccaatttgagggg 14500375  T
Q  318 gctaatttagcttctt 333  Q
    | || |||||||||||    
T  14500376 gatagtttagcttctt 14500391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 37971937 - 37972008
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttct 332  Q
    ||||||||||||| |||| |||||||||||||||| |||  |   |||||| ||||||||||||||||||||    
T  37971937 gagtgtgctccttgtcaaagtctcaggttcgattctctccggtgccaatttaggtgggctaatttagcttct 37972008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 40791537 - 40791490
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||| || ||||||||||||||||||||||||||||| |||||||||    
T  40791537 gcttgagatttgagagtgtgctccttctcaaggtctcaagttcgattc 40791490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 49499 - 49441
Alignment:
Q  161 gccctaaacagaaaactcaatccgtcatactcta-aactcctaagaattcccctttata 218  Q
    |||||||||| ||||| ||||| ||||||||||| |||||| |||||||||||||||||    
T  49499 gccctaaacacaaaacccaatctgtcatactctagaactccaaagaattcccctttata 49441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 16381730 - 16381668
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggt 281  Q
    |||||| |||||||| |||||||||||| ||||||||  ||||||||| ||||| ||||||||    
T  16381730 aacccacttgggttggcctagtggtataggcttgggatctgagagtgttctcctcctcaaggt 16381668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 12497813 - 12497744
Alignment:
Q  264 tgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||| ||||||||||||| |||||||| |||||| |  | |||||||||  ||||||||||||||    
T  12497813 tgtgctcctcctcaaggtctcagattcgattctctctagtactattttgggtggattaatttagcttctt 12497744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 302
Target Start/End: Original strand, 19322766 - 19322851
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctag 302  Q
    |||||||| ||||||||  ||||||||||  | ||||||| || ||||||||||||  |||||||||| |||| ||||| ||||||    
T  19322766 taaacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctctag 19322851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 32687512 - 32687557
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||||||||||||||| |||| ||| ||||||||||||||||||    
T  32687512 ttgggacttgagagtgtgttcctcctcgaggtctcaggttcgattc 32687557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 40416466 - 40416385
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||| |||||||| |||||||||||   ||||| || || |||| ||||||| || ||||||||||||||||||| ||||    
T  40416466 aacccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggttcgattctctct 40416385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 42420288 - 42420349
Alignment:
Q  238 agtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctc 299  Q
    ||||||||  |||| |||| ||||||||||||| | |||||||||||| |||||||||||||    
T  42420288 agtggtattggcttaggacctgagagtgtgctcttactcaaggtctcatgttcgattccctc 42420349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 16918653 - 16918573
Alignment:
Q  220 acccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||| |||||||| |||||||||||  | ||||||  || |||||||||||| |||||||||| ||||| ||||| ||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctct 16918573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 301
Target Start/End: Complemental strand, 19606047 - 19605968
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttggga-cttgagagtgtgctccttctcaaggtctcaggttcgattccctcta 301  Q
    ||||||| |||||||||||||||||    |||||||| |||| ||||| |||||| ||||||||||||||||||||||||||||    
T  19606047 aacccatctgggttgccctagtggttg--gcttgggatcttg-gagtgcgctcct-ctcaaggtctcaggttcgattccctcta 19605968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 35171851 - 35171895
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||    
T  35171851 aggtctcaggttcgattccctctggcaccaatttcggtgggctaa 35171895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 4262349 - 4262302
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||||| ||  ||||||||||| ||||||||||||||||||||||    
T  4262349 gcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattc 4262302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 5147755 - 5147641
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| ||||||||  ||||||||||   |||| ||  || |||| ||||||||||||||||||| | |||||||| |||| ||| ||||||| | |||    
T  5147755 aacccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggtctcggattcgattctctcttgcaccaatttgag-ggg 5147657  T
Q  319 ctaatttagcttcttc 334  Q
     || ||||||||||||    
T  5147656 ttagtttagcttcttc 5147641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 8192513 - 8192475
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  8192513 gagtgtgctcct-ctcaaggtctcaggttcgattccctct 8192475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 9577879 - 9577950
Alignment:
Q  262 agtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||||| |||||  |||||||||| |||||||||||  | ||||| |||| ||||||||| ||||||    
T  9577879 agtgtgctcctcctcaatatctcaggttcaattccctctagtgttaatttaggtgtgctaatttaacttctt 9577950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 18259730 - 18259801
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttc 290  Q
    |||||||||| |||| ||| |||||||  ||||| || |||||||||||||||| ||  |||||||||||||    
T  18259730 aacccatttgagttggcctggtggtattggcttgagatttgagagtgtgctcctcctataggtctcaggttc 18259801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 21939170 - 21939123
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||| |||||||||||||||||||| ||| || |||||||||||||||    
T  21939170 gctttggacttgagagtgtgctcctcctcgagatctcaggttcgattc 21939123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 49572 - 49522
Alignment:
Q  40 attaaggaaaatagggtgctttattgatatgaatgaaaatagtaaactagt 90  Q
    ||||| ||||||| |||||||||||||||  ||||||||||||||| ||||    
T  49572 attaaagaaaatatggtgctttattgatagtaatgaaaatagtaaaatagt 49522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 12632748 - 12632794
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||| |||||||||||| | |||||||||||||||||||||| ||||    
T  12632748 cttgagacttgagagtgggttccttctcaaggtctcaggttcaattc 12632794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 294
Target Start/End: Complemental strand, 17737702 - 17737625
Alignment:
Q  216 ataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||||| |||||||||||   |||||||||  | ||| |||||| |||||||||||| |||||||||||| ||||||||    
T  17737702 ataaactcatttgggttggt-tagtggtattggtttgtgacttgggagtgtgctcctcctcaaggtctcatgttcgatt 17737625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 21212354 - 21212404
Alignment:
Q  34 atggtaattaaggaaaatagggt-gctttattgatatgaatgaaaatagta 83  Q
    ||||||||||||||||||||||| | |||| ||||| ||||||||||||||    
T  21212354 atggtaattaaggaaaatagggtggttttaatgatacgaatgaaaatagta 21212404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 256 - 334
Target Start/End: Complemental strand, 21304033 - 21303955
Alignment:
Q  256 cttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||| |||| ||||||| || ||||| ||||||||||||| |||| |  |||||||| | ||| |||||||||||||||    
T  21304033 cttgggagtatgctcctcctgaaggtttcaggttcgattctctctggtgtcaatttgagggggttaatttagcttcttc 21303955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 42187168 - 42187094
Alignment:
Q  259 gagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||||| ||||||||||||||| |||||||||  |  || ||||||||  || | |||||||||||||||    
T  42187168 gagagtgtgcttcttctcaaggtctcatgttcgattctttacagtatcaatttcagttgactaatttagcttctt 42187094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 14780544 - 14780621
Alignment:
Q  257 ttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||| |||||||||| ||||||||||||||||||| | | |      ||||||| |||||||||||||||||||||    
T  14780544 ttgagaatgtgctccttttcaaggtctcaggttcgatcctccccgatgccaatttgagtgggctaatttagcttcttc 14780621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 334
Target Start/End: Complemental strand, 26773127 - 26773098
Alignment:
Q  305 tcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||||||||||||||||||||||||    
T  26773127 tcaatttgggtgggctaatttagcttcttc 26773098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 33839305 - 33839260
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||| || |||||||||||| ||||||||||||||||| ||||    
T  33839305 ttgggacatgggagtgtgctcctcctcaaggtctcaggttcaattc 33839260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 388
Target Start/End: Original strand, 42644923 - 42644956
Alignment:
Q  355 atatacaaataaagagaacattctagtatttaac 388  Q
    ||||||||||||||||||||||||| ||||||||    
T  42644923 atatacaaataaagagaacattctattatttaac 42644956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 1191564 - 1191608
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    |||||||||||||| |||||||||| | |||||| ||||||||||    
T  1191564 aggtctcaggttcgtttccctctagtaccaatttcggtgggctaa 1191608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 2750659 - 2750587
Alignment:
Q  262 agtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||| | |||||||||||| ||||||||| ||||||   ||||||| | ||| || ||||||||||||    
T  2750659 agtgtgctcttcctcaaggtctcatgttcgattctctctagtgccaatttgagggggttagtttagcttcttc 2750587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 333
Target Start/End: Original strand, 5315556 - 5315584
Alignment:
Q  305 tcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||||||||||||||||||||||    
T  5315556 tcaatttgggtgggctaatttagcttctt 5315584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 6714427 - 6714383
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    |||||||||||| |||||| |||||||| ||||| ||||||||||    
T  6714427 aggtctcaggtttgattccatctagcattaatttcggtgggctaa 6714383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 12994435 - 12994375
Alignment:
Q  236 ctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattcc 296  Q
    ||||||||||   |||||||| || |||||||||||| || ||||||||| ||||||||||    
T  12994435 ctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgattcc 12994375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 25931005 - 25931121
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    |||||||||||||||| ||| |||||||  | ||||||| |||||||||| |  | ||| | ||||||| |||||||| || | |  ||||||||| ||     
T  25931005 aaacccatttgggttggcctggtggtattggtttgggacctgagagtgtgtttatcctcgaagtctcagattcgattctctttggtgtcaatttggatga 25931104  T
Q  318 gctaatttagcttcttc 334  Q
    | |||||||| ||||||    
T  25931105 gttaatttagtttcttc 25931121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 213 - 300
Target Start/End: Complemental strand, 33569941 - 33569853
Alignment:
Q  213 tttataaacccatttgggttgccctagtggta-tacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||||||||  ||||||| | |||||||| |  |||| |||||||  ||||||||| | ||| |||||||||||||||||| ||||    
T  33569941 tttataaacccacatgggttggcttagtggtaattggcttaggacttggaagtgtgctcttcctcgaggtctcaggttcgattctctct 33569853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 321
Target Start/End: Complemental strand, 35092633 - 35092573
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggcta 321  Q
    ||||| ||||||||||||| ||||||||| ||||| | ||||  | |||||||||||||||    
T  35092633 gagtgagctccttctcaagatctcaggtttgattctccctagtgttaatttgggtgggcta 35092573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 36242458 - 36242414
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    ||||||||||||||||||||||| |  ||||||| ||||||||||    
T  36242458 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 36242414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 41314043 - 41314087
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    ||||||||||||||||||||||| |  ||||||| ||||||||||    
T  41314043 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 41314087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 3e-46; HSPs: 89)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 22 - 218
Target Start/End: Original strand, 26130484 - 26130663
Alignment:
Q  22 aagaagtaacagatggtaattaaggaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccaga 121  Q
    ||||||||||||||    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26130484 aagaagtaacagat----attaaggaaaataggttgctttattgatatgaatgaaaatagtaaactagaggaagaaagagtttctctaactactcccaga 26130579  T
Q  122 gtaaagctccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactctaaactcctaagaattcccctttata 218  Q
    | ||||           |||| ||| |||||||||| | |||||||||  |||||||||||||||||||||||||||||||| |||||| |||||||    
T  26130580 gcaaag-----------ctcatagaggaatcctactctggccctaaac--aaaactcaatccgtcatactctaaactcctaaaaattccactttata 26130663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 33181287 - 33181172
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||  |||||| ||||||||||||||||||||||  |||||||||||||    
T  33181287 aaacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctccaactcaagatctcaggttcgattccctctagtgtcaatttgggtgg 33181188  T
Q  318 gctaatttagcttctt 333  Q
    ||||||||||||||||    
T  33181187 gctaatttagcttctt 33181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 46 - 206
Target Start/End: Original strand, 20933202 - 20933368
Alignment:
Q  46 gaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagt--------aaagctccgacaca 137  Q
    |||||||||||| ||||||||||||||||||||||||||| |||| ||||| |||  ||||||||||||||| |||||        ||||||| ||||||    
T  20933202 gaaaatagggtgttttattgatatgaatgaaaatagtaaaatagtagaagagaga--ttctctaactactccaagagtcccagagcaaagctctgacaca 20933299  T
Q  138 actcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactctaaactcctaagaa 206  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  20933300 actcagagaggaatcctactctagccctgaacagaaaactcaatctgtcatactctaaactcataagaa 20933368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 30676577 - 30676453
Alignment:
Q  93 aagaaagagtttctctaactactcccagagtaaagctccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactc 192  Q
    |||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||| | |||||| |||||    
T  30676577 aagagagagtttctctaactactcccagagcaaagctccgactcaactcagagaggaatcctactctggccctaaacagaaaacttattccgtcctactc 30676478  T
Q  193 t-aaactcctaagaattccccttta 216  Q
    | |||||| ||||||||||||||||    
T  30676477 taaaactcttaagaattccccttta 30676453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 30676592 - 30676710
Alignment:
Q  100 agtttctctaactactcccagagtaaagctccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactct-aaact 198  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| | ||||||||||||||||| | ||| || |||||| |||||    
T  30676592 agtttctctaactactcccagagcaaagctccgactcaactcagagaggaatcctactctggccctaaacagaaaacttattccatcctactctaaaact 30676691  T
Q  199 cct-aagaattccccttta 216  Q
    | | |||||||||||||||    
T  30676692 cttaaagaattccccttta 30676710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 519 - 577
Target Start/End: Original strand, 26130855 - 26130913
Alignment:
Q  519 ataagtacaaagcaaatagggagttgagatcacatgtgtgagttgtgaccagataaatg 577  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26130855 ataagtacaaagcaaatagggagttgagatcacatgtgtgagttgtgaccagataaatg 26130913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 30676698 - 30676763
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30676698 gaattcccctttacatacaaataaagagaacattctagtatttaaccctaatgggcctcttattat 30676763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 26130650 - 26130714
Alignment:
Q  344 aattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26130650 aattccactttatatacaaataaagagaacattctaatatttaactctaatgggcctcttattat 26130714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 20934317 - 20934408
Alignment:
Q  126 agctccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactctaaactcctaagaattcccctttat 217  Q
    ||||||||||||||||||| | |||||||||  |||||||||| |||||||| | || |||||||||||||||||||||||||| |||||||    
T  20934317 agctccgacacaactcagataggaatcctaccatagccctaaatagaaaacttattctgtcatactctaaactcctaagaattcgcctttat 20934408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 43590907 - 43591022
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| |||||||  |||||||||||| |||||||||||| ||||| |||||||||||||||| | ||||   |||||  ||||||    
T  43590907 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtggg 43591006  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  43591007 ctaatttagcttcttc 43591022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 30676465 - 30676400
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  30676465 gaattcccctttacatacaaataaagagaacattcttgtatttaaccctaatgggcctcttattat 30676400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 18363696 - 18363810
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||||||||||| ||||| || ||| |||||||||||| |||||||||||||||| ||||| |||||| | ||||||| | |||    
T  18363696 aacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctctagtaccaatttgag-ggg 18363794  T
Q  319 ctaatttagcttcttc 334  Q
     || ||||||||||||    
T  18363795 ttagtttagcttcttc 18363810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 45709785 - 45709670
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    |||||||||||||||| |||||||||||  ||||||||  ||||||||||||||| ||| |||||||||||||||||  |||    | |||||| |||||    
T  45709785 aaacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctccgataccaatttaggtgg 45709686  T
Q  318 gctaatttagcttctt 333  Q
    ||||| ||||||||||    
T  45709685 gctaacttagcttctt 45709670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 26459486 - 26459405
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||| |||||||| |||||||||||  ||||||||| || |||||||||||| |||||||||||||||||||||| ||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctct 26459405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 41519157 - 41519072
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||| || ||||||||||||||||||||||||||| |||||||  |||  |  |||||||||||||||||||||||||||||    
T  41519157 gcttgggatttaagagtgtgctccttctcaaggtctcagattcgattatctccggtgtcaatttgggtgggctaatttagcttctt 41519072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 214 - 334
Target Start/End: Complemental strand, 17041093 - 17040973
Alignment:
Q  214 ttataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgg 313  Q
    ||||||||||| ||||||||  ||||||| ||  ||||||||  ||  ||||||||||| |||||||||||||||||||||| ||| ||   ||||||||    
T  17041093 ttataaacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttgg 17040994  T
Q  314 gtgggctaatttagcttcttc 334  Q
    |||||  ||||||||||||||    
T  17040993 gtgggtcaatttagcttcttc 17040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 217 - 333
Target Start/End: Complemental strand, 24438325 - 24438209
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||| |||||||||| | |||||||||  | |||||||||| |||||||||| |||| ||||| |||| |||||||| |||| |  ||||||||  ||    
T  24438325 taaacctatttgggttgacttagtggtattggtttgggacttgggagtgtgctctttcttaaggtttcagattcgattctctctggtgtcaatttgaatg 24438226  T
Q  317 ggctaatttagcttctt 333  Q
    |||||||||||||||||    
T  24438225 ggctaatttagcttctt 24438209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 226 - 334
Target Start/End: Complemental strand, 41519333 - 41519226
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| |||||||||||   ||||||| ||  |||||||||||| |||||||||||||||||| ||| |||| |  ||||||| |||||||||||||    
T  41519333 ttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctct-gtgtcaatttaggtgggctaattt 41519235  T
Q  326 agcttcttc 334  Q
    |||||||||    
T  41519234 agcttcttc 41519226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 226 - 330
Target Start/End: Original strand, 42711965 - 42712069
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| | |||||||||  |||||| || || |||||||||||| |||||||||||| ||||||||| | ||||  ||||||| |||||||||||||    
T  42711965 ttgggttggcttagtggtattagcttggtacatgggagtgtgctcctcctcaaggtctcatgttcgattctccctagtgtcaatttaggtgggctaattt 42712064  T
Q  326 agctt 330  Q
    |||||    
T  42712065 agctt 42712069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 15137553 - 15137668
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| ||||||    ||||||| ||  |||||||||||| |||||||||||||||| ||||| |||| |  ||||||||||||||    
T  15137553 aacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttgggtggg 15137652  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||| ||||||    
T  15137653 ctaatttagtttcttc 15137668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 27776172 - 27776243
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttc 290  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||| | |||||||||||    
T  27776172 aacccacttgggttggcctggtggtatacgcttgggacttgagagtgtgctcctcctcgaagtctcaggttc 27776243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 274 - 333
Target Start/End: Complemental strand, 48983754 - 48983695
Alignment:
Q  274 ctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  48983754 ctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttaacttctt 48983695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 20933371 - 20933429
Alignment:
Q  350 cctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  20933371 cctttatttacaaataaagagaacattctagtatataaccctaatgggcctcttattat 20933429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 330
Target Start/End: Original strand, 30442488 - 30442597
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| || ||||||||  ||||||||| || |||| ||||||| |||||||||| ||||||||||  |||| |  ||||||||||||||    
T  30442488 aacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgatt--ctctggagtcaatttgggtggg 30442585  T
Q  319 ctaatttagctt 330  Q
     |||||||||||    
T  30442586 ttaatttagctt 30442597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 30579334 - 30579450
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| ||| |||||||  ||||| ||| || |||||| | ||| |||||||||||||||||||||  |||| |   |||||| |||||    
T  30579334 aaacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaatttaggtgg 30579433  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  30579434 gctaatttagcttcttc 30579450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 20335907 - 20335792
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| ||||||||  |||| |||||  |||||||||||| |||||||||||| ||| |||||||||||||||||| | |     ||||||||| ||||    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatggg 20335808  T
Q  319 ctaatttagcttcttc 334  Q
    |||||||| |||||||    
T  20335807 ctaatttaacttcttc 20335792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 39631844 - 39631959
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||||||||||  ||||||||| || ||||  |||||| |||||||||||||||||||||| |||| |   ||||||| | |||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaatttgaggggg 39631943  T
Q  319 ctaatttagcttcttc 334  Q
     || ||||||||||||    
T  39631944 ttagtttagcttcttc 39631959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 35513467 - 35513541
Alignment:
Q  220 acccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||| ||| |  ||||| ||||||||    
T  35513467 acccatttgggttggcctagtggtatttgcttgggacttgagagtgtgctcctcctcgatatctcatgttcgatt 35513541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 43215183 - 43215265
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||| ||||||||  ||||||||||  ||||||||| |  |||||||||||| |||||||||||||||||||||| ||||    
T  43215183 aaacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctct 43215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 9183225 - 9183152
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||| ||||| |||||||||||||||  |||| |  ||||||||||||||||||||||| ||||||    
T  9183225 gagtgtgctcctcctcaaagtctcaggttcgattatctctggtgtcaatttgggtgggctaatttagtttcttc 9183152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 235 - 327
Target Start/End: Original strand, 11700181 - 11700272
Alignment:
Q  235 cctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttag 327  Q
    |||||||| ||  ||||| ||||||||||| ||||||| |||||||||||||||||||||| |||| |   ||||||| ||||||||||||||    
T  11700181 cctagtggcattggcttgagacttgagagtttgctcctcctcaaggtctcaggttcgattctctct-gtgccaatttgagtgggctaatttag 11700272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 226 - 334
Target Start/End: Complemental strand, 15905742 - 15905635
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| ||| | |||||  ||||||||| || |||||||||||| || | ||||||||||||||||| | |||   |||||||||||||| ||||||    
T  15905742 ttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcctta-ggtctcaggttcgattctccctaatgtcaatttgggtgggttaattt 15905644  T
Q  326 agcttcttc 334  Q
    |||||||||    
T  15905643 agcttcttc 15905635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 334
Target Start/End: Complemental strand, 11721040 - 11720921
Alignment:
Q  215 tataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttggg 314  Q
    |||||||| | || ||||| ||| |||||||  ||||||||| || || ||||||||| || ||||| |||| |||||||| | | ||   |||||||||    
T  11721040 tataaaccaacttcggttggcctggtggtattggcttgggacctgggaatgtgctcctccttaaggtatcagattcgattctccccagtgccaatttggg 11720941  T
Q  315 tgggctaatttagcttcttc 334  Q
    ||||||||||||||||||||    
T  11720940 tgggctaatttagcttcttc 11720921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 23552117 - 23552200
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctcta 301  Q
    ||||||| |||||||| ||||||| |||   |||||||| || |||||||||||| |||||||||||| ||||||||| |||||    
T  23552117 aaacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctcta 23552200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 4572344 - 4572258
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||| ||| || ||||| |||| || ||||||||||||||||||||| |||  |  |||||||||||||||||||||| |||||||    
T  4572344 gcttgagacctgggagtgagctctttatcaaggtctcaggttcgattctctccggtgtcaatttgggtgggctaatttatcttcttc 4572258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 219 - 333
Target Start/End: Complemental strand, 5273666 - 5273552
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| ||||| |  ||||||||| | ||||||||||||| |||||||||| ||||| ||||  |||  |   |||||||||||||    
T  5273666 aacccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggtttgattgtctccggtgccaatttgggtggg 5273567  T
Q  319 ctaatttagcttctt 333  Q
    ||| |||||||||||    
T  5273566 ctagtttagcttctt 5273552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 264 - 334
Target Start/End: Original strand, 21558173 - 21558243
Alignment:
Q  264 tgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||| |||||||||||||||||||||| |||| |   |||||| |||||| |||||||||||||||    
T  21558173 tgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttcttc 21558243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 29385790 - 29385704
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||  |||||||||||| |||||||||||||||| ||||| || | |   |||||||||||||||| ||| ||||||||    
T  29385790 gcttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctctttggtgccaatttgggtgggctacttttgcttcttc 29385704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 41487361 - 41487474
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| ||| |||||||  |||||||||||| |||||| |||   ||||||||||||||||||||||   |  |   |||||| |||||    
T  41487361 aaacccacttgggttggcctggtggtattggcttgggacttgggagtgttctc---ctcaaggtctcaggttcgattcttcccggtgccaatttaggtgg 41487457  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  41487458 gctaatttagcttcttc 41487474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 219 - 333
Target Start/End: Original strand, 48771938 - 48772052
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| | | |||||||  ||||||||  || |||||||||||| ||  |||||||||||||||||  | | || | |||||| ||||||    
T  48771938 aacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgattatcccaagtaccaatttaggtggg 48772037  T
Q  319 ctaatttagcttctt 333  Q
    |||||||||||||||    
T  48772038 ctaatttagcttctt 48772052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 48984200 - 48984146
Alignment:
Q  224 atttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaa 278  Q
    ||||||||||| ||||||||||| |||||||||||| |||||||||||| |||||    
T  48984200 atttgggttgctctagtggtataggcttgggacttgggagtgtgctcctcctcaa 48984146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 6450420 - 6450505
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||| |||||  ||||||| ||||||||||||||| ||||  ||||| | ||||  ||||||||||| |||||||||||||||||    
T  6450420 gcttgagactttggagtgtgatccttctcaaggtctgaggtctgattctccctagtgtcaatttgggtaggctaatttagcttctt 6450505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 20934395 - 20934460
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    |||||| ||||||| |||| ||||| ||||||||||||| ||||||||||||||  ||||||||||    
T  20934395 gaattcgcctttatttacagataaatagaacattctagtgtttaactctaatggaactcttattat 20934460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 25132412 - 25132340
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||||||||| ||||||||||||||||||| | | |   | ||||||||||||||||||||||||||||    
T  25132412 gagtgtgctccttcttaaggtctcaggttcgattctcccaatgct-aatttgggtgggctaatttagcttcttc 25132340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 33869521 - 33869440
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||| |||||||| |||||| ||||  ||||| ||| ||  ||||||||||||||||||||||| |||||||||| ||||    
T  33869521 aacccacttgggttggcctagtagtattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctct 33869440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 2446307 - 2446423
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| ||||||||  ||  ||||||  |||||||||||| |||||||||||| ||| || ||||| ||||||||| |||  |   | |||| |||||    
T  2446307 aaacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctccggtgccgatttaggtgg 2446406  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  2446407 gctaatttagcttcttc 2446423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 3174969 - 3175041
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||||| |||| |||||||||||||||||| ||| |  |||||||| | |||| ||||||||||||||    
T  3174969 gagtgtgctccatctcgaggtctcaggttcgattctctccaatatcaatttagttgggttaatttagcttctt 3175041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 7721400 - 7721484
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||| || |||||| ||||| |||||||||||| ||||||||| |||| |  ||||||||| |||  |||||||||||||||    
T  7721400 ttgggacctgggagtgtactcctcctcaaggtctcatgttcgattctctctggtgtcaatttggatggaataatttagcttcttc 7721484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 9608688 - 9608612
Alignment:
Q  236 ctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttg 312  Q
    ||||||||||| ||||||||  || |||||| ||||| |||||| ||||||||||||||| ||||||  ||||||||    
T  9608688 ctagtggtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctctagtgtcaatttg 9608612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 9836260 - 9836184
Alignment:
Q  236 ctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttg 312  Q
    ||||||||||| ||||||||  || |||||| ||||| |||||| ||||||||||||||| ||||||  ||||||||    
T  9836260 ctagtggtataggcttgggatctgggagtgtcctcctcctcaagatctcaggttcgattctctctagtgtcaatttg 9836184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 18031943 - 18031987
Alignment:
Q  364 taaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    |||||||||||||||||||||||||  ||||||||||||||||||    
T  18031943 taaagagaacattctagtatttaaccttaatgggcctcttattat 18031987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 22760863 - 22760939
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||| ||||||||  || |||||||   |||||||| || |||||||||||| ||||||||||||||||||||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattc 22760939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 25956368 - 25956293
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||||||||||| |||||||||||  ||||||||| |  ||||||||||| ||||||||||| |||||| ||||    
T  25956368 aacccatttgggttggcctagtggtattggcttgggaccttggagtgtgctcc-tctcaaggtcttaggttcaattc 25956293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 22035427 - 22035513
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||| ||||||||||||||| ||| ||| | |||||||||||| |||  |  |||||||  |||| ||||||||||||||||    
T  22035427 gcttgggacctgagagtgtgctcctcctcgaggacccaggttcgattctctcctgtgtcaatttaagtggactaatttagcttcttc 22035513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 25021411 - 25021345
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctca 285  Q
    |||||| |||||||| |||||||||||  ||||||||| || |||||||||||| ||||| ||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 280000 - 279916
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||| ||| |||||| ||||| || |||||||||||||| |||| |||  |   ||||||||||||||||||||||||||||    
T  280000 gcttggga-ttgggagtgtactcctccttaaggtctcaggttcaattctctccggtgccaatttgggtgggctaatttagcttctt 279916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 21570078 - 21570033
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||||    
T  21570078 cttgggacttgagagtgcgctcctcctcaaggtctcaagttcgatt 21570033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 38374676 - 38374599
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||| |||||||| | | ||||| |  ||||||||| | ||||||||||||| |||||||||| |||||||||||    
T  38374676 aaacccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattc 38374599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 42836077 - 42836008
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggt 288  Q
    |||||| |||||||| |||||||||||  ||||||||| || |||||||||| | ||||||| |||||||    
T  42836077 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaaggcctcaggt 42836008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 44628230 - 44628146
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||| |  |||||||||||| ||||| |||||| ||| |||||||||  |  ||||||| |||||||||||||||||||||    
T  44628230 gcttgggaccttggagtgtgctcctcctcaaagtctcaagtttgattccctcg-gtgtcaattttggtgggctaatttagcttctt 44628146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 39499795 - 39499719
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||| |||||||| |||||||||||  ||||||||| || ||||||| ||||  | ||||||||| |||||||||    
T  39499795 aacccacttgggttggcctagtggtattggcttgggacctgtgagtgtgttcctctttaaggtctcatgttcgattc 39499719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 23301678 - 23301563
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| |||||||   ||||||||||| |||||||||||| ||  |||||||| ||| ||||| || |||    |||||| ||||     
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtctcaagtttgattctctttagtgctaatttgagtgga 23301579  T
Q  319 ctaatttagcttcttc 334  Q
    |||||||| |||||||    
T  23301578 ctaatttaacttcttc 23301563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 23330914 - 23330864
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctc 299  Q
    |||||||| || ||||||||||||| ||||||||||||||||||| ||||||    
T  23330914 gcttgggattttagagtgtgctcct-ctcaaggtctcaggttcgactccctc 23330864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 524
Target Start/End: Original strand, 26130797 - 26130828
Alignment:
Q  493 tattggatcctaacacatattccattataagt 524  Q
    ||||||||||||||||||||||||||||||||    
T  26130797 tattggatcctaacacatattccattataagt 26130828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 295
Target Start/End: Complemental strand, 29916843 - 29916808
Alignment:
Q  260 agagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||||||||| ||||||||||||||||||||||    
T  29916843 agagtgtgctcctcctcaaggtctcaggttcgattc 29916808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 37162416 - 37162345
Alignment:
Q  229 ggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||| |||||||||| |  |||| || ||| ||||||||| ||||||||||||||| ||||||||| ||||    
T  37162416 ggttggcctagtggtaaagacttgagatttgggagtgtgcttcttctcaaggtctcaagttcgattctctct 37162345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 41975946 - 41976001
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||| ||||||||| ||||||  |||||||  ||||||||||||||||||||    
T  41975946 aggtctcaagttcgattctctctagtgtcaatttaagtgggctaatttagcttctt 41976001  T

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Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 3280561 - 3280495
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctca 285  Q
    |||||| |||||||| | | |||||||  |||||||||  |||||||||||||| ||||||||||||    
T  3280561 aacccacttgggttgacatggtggtattggcttgggacccgagagtgtgctcctcctcaaggtctca 3280495  T

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Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 5579310 - 5579240
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggtt 289  Q
    |||||| |||||||| ||| ||||| |  ||||||||| |  |||||||||||| ||||||||||||||||    
T  5579310 aacccacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtt 5579240  T

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Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 5668618 - 5668532
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||| ||  ||||||||||| ||| |||||||||| ||||||| |||  |  | |||||  |||||||||||||||||||||    
T  5668618 gcttgggacatggaagtgtgctcctcctcgaggtctcaggatcgattctctccggagttaatttatgtgggctaatttagcttcttc 5668532  T

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Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 14058283 - 14058329
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||| || ||||||||||||| | ||||||||||||||||||||||    
T  14058283 cttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattc 14058329  T

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Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 14368311 - 14368357
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||| || ||||||||||||| | ||||||||||||||||||||||    
T  14368311 cttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattc 14368357  T

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Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 236 - 334
Target Start/End: Original strand, 33222387 - 33222485
Alignment:
Q  236 ctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||||  ||||||||| ||  ||||| ||| | |||||||||||||||||||||| |||| |  |||||||| | ||| || ||||| ||||||    
T  33222387 ctagtggtattggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctggtgtcaatttgagagggttagtttagattcttc 33222485  T

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Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 2882992 - 2883064
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||| ||||||||||||||||| |||| |||| |   |||||| |||||||| | |||||||||||    
T  2882992 gagtgtgctcctcctcaaggtctcaggttcaattctctctggtggcaatttaggtgggct-acttagcttcttc 2883064  T

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Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 5934150 - 5934235
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||  || |||||||||||| ||  |||| ||| |||||||||||||| |  ||||||| ||||| ||||||||| |||||    
T  5934150 gcttgggatctgggagtgtgctcctccttgaggtttcatgttcgattccctctggtgtcaatttaggtggactaatttagtttctt 5934235  T

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Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 7309398 - 7309470
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||| ||| |||||||| ||||||||| |||  |  |||||||  |||||||||||||||||||||    
T  7309398 gagtgtgctcctcctcgaggtctcaagttcgattctctc-cgtgtcaatttaagtgggctaatttagcttcttc 7309470  T

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Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 295
Target Start/End: Complemental strand, 7499993 - 7499924
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||||  ||||||| |||  ||||||||| ||||||| |||||||  || ||||||||||||||||||    
T  7499993 ttgggttagcctagtgatattggcttgggacctgagagtttgctcctcttcgaggtctcaggttcgattc 7499924  T

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Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 292
Target Start/End: Original strand, 7801180 - 7801253
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcga 292  Q
    |||||| |||| ||| ||| |||||||   |||||||| || ||||||||||||  ||||||||||||||||||    
T  7801180 aacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggttcga 7801253  T

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Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 294
Target Start/End: Original strand, 31835234 - 31835267
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||||||||||| |||||||||||||||||||||    
T  31835234 gagtgtgctcctcctcaaggtctcaggttcgatt 31835267  T

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Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 37473656 - 37473729
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||| ||||||| ||  |||||||||||||||||| | |||   ||||||| |||||| |||||||||||||||    
T  37473656 gagtttgctcctccttgaggtctcaggttcgattctccctaatgtcaatttaggtgggttaatttagcttcttc 37473729  T

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Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 334
Target Start/End: Complemental strand, 43663109 - 43663056
Alignment:
Q  281 tctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||| || |||  | |||||||||||||| ||||||||||||||||    
T  43663109 tctcaggttcgaatctctccggtatcaatttgggtggactaatttagcttcttc 43663056  T

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Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 45229059 - 45228986
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||| |||||  |||| | ||||||||||| ||| ||  |||||||  |||||||||||||||||||||    
T  45229059 gagtgtgcttcttcttgaggttttaggttcgattctctccagtgtcaatttaagtgggctaatttagcttcttc 45228986  T

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Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 2962476 - 2962540
Alignment:
Q  236 ctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||||||  | |||| || || |||||||||||| |||||| ||||||||||||||| ||||    
T  2962476 ctagtggtattggtttggaacctgtgagtgtgctcctcctcaagatctcaggttcgattctctct 2962540  T

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Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 306 - 334
Target Start/End: Complemental strand, 3968643 - 3968615
Alignment:
Q  306 caatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||||||||||||||||||||    
T  3968643 caatttgggtgggctaatttagcttcttc 3968615  T

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Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 22703541 - 22703585
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    ||||||||||||||||||||||| |  ||||||| ||||||||||    
T  22703541 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 22703585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 27313779 - 27313695
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||| ||||| |||| ||||||| |||||||| |||| |||||||| ||||     |||||| |||| |||||||||||||||||    
T  27313779 ttggaacttgggagtttgctcctcctcaaggtttcagattcgattctctctgatgccaatttaggtgagctaatttagcttcttc 27313695  T

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Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 331
Target Start/End: Original strand, 29196936 - 29197019
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcga--ttccctctagcatcaatttgggtgggctaatttagcttc 331  Q
    ||||||||||  ||||||||| |  ||||||||||||||||||  ||| ||||||  ||||| ||||||  |||||||||||||    
T  29196936 ttgggacttggaagtgtgctcgtcttcaaggtctcaggttcgattttctctctagtgtcaatatgggtgatctaatttagcttc 29197019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 29785357 - 29785301
Alignment:
Q  239 gtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||||| ||||||||  ||  ||||||||||| |||||||||||| |||||||||    
T  29785357 gtggtataggcttgggatctggaagtgtgctcctcctcaaggtctcatgttcgattc 29785301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 48959240 - 48959312
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||| |||| |||||||||||| ||||||||| |||  | ||||||||  || ||||||||| |||||||    
T  48959240 gagtgtgttcctcctcaaggtctcatgttcgattctctccgggatcaatttaagttggctaatttcgcttctt 48959312  T

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Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 11819776 - 11819891
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||| ||||||  ||||||||||||||    
T  11819776 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtggg 11819875  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  11819876 ctaatttagcttcttc 11819891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 53 - 218
Target Start/End: Complemental strand, 16979472 - 16979310
Alignment:
Q  53 gggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagtaaagctccgacacaactcagagacgaatc 152  Q
    |||||||||||||||| |||||||||||||||| |||| ||||| |||||| |||||||||||||||||| |||||||||||| |||||||||  |||||    
T  16979472 gggtgctttattgatacgaatgaaaatagtaaaatagtagaagagagagtt-ctctaactactcccagagcaaagctccgacataactcagag--gaatc 16979376  T
Q  153 ctactttagccctaaacagaaaactcaatccgtcatactctaaactcctaagaattcccctttata 218  Q
    ||||| | ||||||||||||||||  | |||||| || ||| |||||| ||||||||| |||||||    
T  16979375 ctactctggccctaaacagaaaacctattccgtcctattctgaactccaaagaattcctctttata 16979310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 219 - 333
Target Start/End: Original strand, 27750730 - 27750844
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||  ||||||||| |||     
T  27750730 aacccatttgggttgccctcgtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatgga 27750829  T
Q  319 ctaatttagcttctt 333  Q
    |||||||||||||||    
T  27750830 ctaatttagcttctt 27750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 22681410 - 22681269
Alignment:
Q  29 aacagatggtaattaaggaaaatagggtgctttattg-atatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagtaaag 127  Q
    |||||||||||||||||||||||| |||||||||||| |||  |||||||||||||        ||||| ||||||||||||||||||||||||| ||||    
T  22681410 aacagatggtaattaaggaaaatatggtgctttattggatagtaatgaaaatagta--------gaagagagagtttctctaactactcccagagcaaag 22681319  T
Q  128 ctccgacacaactcagagacgaatcctactttagccctaaacagaaaact 177  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  22681318 ctccgacacaactcagagaggaatcctactctggccctaaacagaaaact 22681269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 219 - 333
Target Start/End: Complemental strand, 33727949 - 33727835
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||||||||||||||||||||||||| | ||| ||||||  ||||||||||| |||||||||||||||||||||||||||||  ||||||||| ||||    
T  33727949 aacccatttgggttgccctagtggtataggtttgagacttggaagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatggg 33727850  T
Q  319 ctaatttagcttctt 333  Q
    |||||||||||||||    
T  33727849 ctaatttagcttctt 33727835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 44780191 - 44780075
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| |||||||| ||  |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||  |||||||||||||    
T  44780191 aaacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttgggtgg 44780092  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  44780091 gctaatttagcttcttc 44780075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 217 - 326
Target Start/End: Complemental strand, 19703565 - 19703456
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||||| |||||||| |||||||||||  ||||||||| ||||||||||||||| |||||||||||||||||||||| | ||||  ||||||  ||||    
T  19703565 taaacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccctagtgtcaattaaggtg 19703466  T
Q  317 ggctaattta 326  Q
    ||||||||||    
T  19703465 ggctaattta 19703456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 101 - 193
Target Start/End: Original strand, 22751684 - 22751776
Alignment:
Q  101 gtttctctaactactcccagagtaaagctccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactct 193  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| |||||||||||||| || | || ||||||||||    
T  22751684 gtttctctaactactcccagagcaaagctccgacacaactcagagaggaatcttactttggccctaaacagaaagcttattctgtcatactct 22751776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 217 - 334
Target Start/End: Original strand, 16852338 - 16852455
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||||| |||||||| |||||||||||  ||||||||| || |||||||||||| ||| |||||||||||||||||| |  |||   |||||| ||||    
T  16852338 taaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccttagtgccaatttaggtg 16852437  T
Q  317 ggctaatttagcttcttc 334  Q
    ||||| ||||||||||||    
T  16852438 ggctattttagcttcttc 16852455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 330
Target Start/End: Original strand, 3624582 - 3624690
Alignment:
Q  221 cccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggct 320  Q
    |||| |||||||| |||||||||||  ||||||||| || ||||||||||||  ||||||||||||||||||||| |||  |  ||||||| ||||||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc-cgggtcaatttaggtgggct 3624680  T
Q  321 aatttagctt 330  Q
    ||||||||||    
T  3624681 aatttagctt 3624690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 16979324 - 16979259
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  16979324 gaattcctctttatatacaaataaagagaacattctagtatttaaccctaatgagtctcttattat 16979259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 18540298 - 18540413
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||||||||||  ||||||||| || |||||| || || |||||||||||||||||||||| |||| |   ||||||| | |||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagaggg 18540397  T
Q  319 ctaatttagcttcttc 334  Q
     |||||||||||||||    
T  18540398 ttaatttagcttcttc 18540413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 219 - 333
Target Start/End: Complemental strand, 6436631 - 6436517
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||||||| |||||||  |||||||||||  |||||||||||| | ||||||||||| |||||||||||||   | |||||||| || |    
T  6436631 aacccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcctccgcaaggtctcagattcgattccctctgaaaccaatttggatgag 6436532  T
Q  319 ctaatttagcttctt 333  Q
     ||||||| ||||||    
T  6436531 ttaatttaacttctt 6436517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 221 - 330
Target Start/End: Original strand, 2203494 - 2203603
Alignment:
Q  221 cccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggct 320  Q
    |||| |||||||| |||||||||||  ||||||||| || |||||||||||| |||||||||||||| || |||| | |  |   |||||||||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggct 2203593  T
Q  321 aatttagctt 330  Q
    ||||||||||    
T  2203594 aatttagctt 2203603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 11492107 - 11492035
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||||||||| |||||| ||||||||||| ||  ||  |||||||||||||||||||||||||||||    
T  11492107 gagtgtgctccttctcgaggtcttaggttcgattctcttcagtgtcaatttgggtgggctaatttagcttctt 11492035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 11518953 - 11518845
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||  |||||||||||| |||||| ||||| |||||| | ||| |||||||||| ||||||||||| || ||   |||||||| |||||    
T  11518953 aacccacttgggttagcctagtggtataggcttggaacttgggagtgtacccctcctcaaggtcttaggttcgattcactataatgtcaatttgagtggg 11518854  T
Q  319 ctaatttag 327  Q
    |||||||||    
T  11518853 ctaatttag 11518845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 327
Target Start/End: Complemental strand, 23361725 - 23361617
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| |||||||   |||||||  || |||||||||||| ||||||||||||||||| |||| |||| |  ||||||| ||||||    
T  23361725 aacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaatttaggtggg 23361626  T
Q  319 ctaatttag 327  Q
    |||||||||    
T  23361625 ctaatttag 23361617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 219 - 333
Target Start/End: Complemental strand, 20994534 - 20994419
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttc-tcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    |||||| |||||||| |||||||||||   |||||||| || |||||||||||| | |||| |||||||| ||||||  |||| | | |||||||| |||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctccctcaaagtctcaggatcgattatctctggtaccaatttggatgg 20994435  T
Q  318 gctaatttagcttctt 333  Q
    ||||||||||||||||    
T  20994434 gctaatttagcttctt 20994419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 219 - 333
Target Start/End: Original strand, 968362 - 968476
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| ||| |||| ||| |||||||  ||||||||| || |||||||||||| ||| |||||||||||||||||| |||      |||||| ||||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtggg 968461  T
Q  319 ctaatttagcttctt 333  Q
    |||||||||||||||    
T  968462 ctaatttagcttctt 968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 219 - 333
Target Start/End: Original strand, 26688865 - 26688979
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| ||||| |  ||||||||| |  |||||||||||| |||||||||||||||||  |||   ||||  ||||||||||||||    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggttcagttcttcctagtgtcaatttgggtggg 26688964  T
Q  319 ctaatttagcttctt 333  Q
    ||| |||||||||||    
T  26688965 ctagtttagcttctt 26688979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 217 - 331
Target Start/End: Complemental strand, 35641979 - 35641865
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||||| ||||||||  || |||||||  ||||| || ||| |||||||||||| ||| | |||||||||||||||| ||| || | |||||| | ||    
T  35641979 taaacccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgattctctccagaaccaatttagatg 35641880  T
Q  317 ggctaatttagcttc 331  Q
    |||||||||||||||    
T  35641879 ggctaatttagcttc 35641865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 334
Target Start/End: Complemental strand, 3058127 - 3058011
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||||||||||||||  || |||||||  | ||||| |||| ||||||||||||   |||||||||||||||||||| ||   || ||||||| ||||    
T  3058127 taaacccatttgggttggtctggtggtattggtttgggtcttgggagtgtgctcctctgcaaggtctcaggttcgattctcttcggcgtcaatttaggtg 3058028  T
Q  317 ggctaatttagcttcttc 334  Q
    |||| |||||||||||||    
T  3058027 ggct-atttagcttcttc 3058011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 334
Target Start/End: Original strand, 6536538 - 6536635
Alignment:
Q  237 tagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||  ||||||||| |  |||||||||||| ||||||||||||||||| |||| |||| |   |||||| |||||| |||||||||||||||    
T  6536538 tagtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttcttc 6536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 28783059 - 28783175
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc-cctctagcatcaatttgggtg 316  Q
    ||||||| |||||||| | | |||||||  ||||| ||| || |||||||||||| |||||||||||| ||||||||| ||||  |   |||||||||||    
T  28783059 aaacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctc-ggtgccaatttgggtg 28783157  T
Q  317 ggctaatttagcttcttc 334  Q
    ||||||||||||||||||    
T  28783158 ggctaatttagcttcttc 28783175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 35286759 - 35286804
Alignment:
Q  101 gtttctctaactactcccagagtaaagctccgacacaactcagaga 146  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  35286759 gtttctctaactactcccagagcaaagctccgacacaactcagaga 35286804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 43594349 - 43594280
Alignment:
Q  264 tgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||| |||| |||||||||||||||||||||| ||||||  ||||||||| ||||||||||||| |||||    
T  43594349 tgtgttcctcctcaaggtctcaggttcgattctctctagtgtcaatttggatgggctaatttagtttctt 43594280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 215 - 295
Target Start/End: Original strand, 18897162 - 18897242
Alignment:
Q  215 tataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||||||| |||||||| ||||||||| |  | ||||||| | ||||||||||||| |||||||||||| |||||||||    
T  18897162 tataaacccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaaggtctcatgttcgattc 18897242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 29431011 - 29431126
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| | |||||  |||||||||||| |||||||||||| ||  ||| |||||||||||||| || | |    |||||| |||||    
T  29431011 aacccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctctttggtgctaatttgagtggg 29431110  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  29431111 ctaatttagcttcttc 29431126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 354 - 408
Target Start/End: Original strand, 31233741 - 31233795
Alignment:
Q  354 tatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    ||||||||||||||| || ||||||| ||||||||||||||| ||||||||||||    
T  31233741 tatatacaaataaagggagcattctaatatttaactctaatgagcctcttattat 31233795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 28566104 - 28566180
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||| |||||||| |||||||||||  | ||||||| | ||||||||||||||||||||| |||| |||||||||    
T  28566104 aaacccacttgggttgacctagtggtattggtttgggaccttagagtgtgctccttctcaagg-ctcatgttcgattc 28566180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 28573727 - 28573803
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||| |||||||| |||||||||||  | ||||||| | ||||||||||||||||||||| |||| |||||||||    
T  28573727 aaacccacttgggttgacctagtggtattggtttgggaccttagagtgtgctccttctcaagg-ctcatgttcgattc 28573803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 8484998 - 8485114
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| ||| |||||||  ||||||||| || ||||||||||||  |  ||||||||  |||||||| |||  |   |||||| |||||    
T  8484998 aaacccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaatttaggtgg 8485097  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  8485098 gctaatttagcttcttc 8485114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 31233593 - 31233649
Alignment:
Q  29 aacagatggtaattaaggaaaatagggtgctttattgatatgaatgaaaatagtaaa 85  Q
    |||| ||||||||||||||||||| |||| ||||||||| ||||||| |||||||||    
T  31233593 aacatatggtaattaaggaaaatatggtgttttattgatgtgaatgataatagtaaa 31233649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 45527610 - 45527666
Alignment:
Q  274 ctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagctt 330  Q
    ||||| |||||||||||||||| ||| ||| ||||||| ||||||||||||||||||    
T  45527610 ctcaaagtctcaggttcgattctctcaagcgtcaatttaggtgggctaatttagctt 45527666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 3826856 - 3826777
Alignment:
Q  216 ataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||||| |||||||| |||||||||||  |||||  | |||||||||||||||| | | || |||||||||||||||    
T  3826856 ataaacccacttgggttggcctagtggtattggcttgccatttgagagtgtgctcctccacgagatctcaggttcgattc 3826777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 4436004 - 4436090
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||| ||| || ||| |||||||| |||||||||||||  ||||||| |||  ||  |||||||||||||||||||||| ||||||    
T  4436004 gcttgagacatgggagagtgctcctcctcaaggtctcagactcgattctctcctgccccaatttgggtgggctaatttagtttcttc 4436090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 330
Target Start/End: Complemental strand, 29858124 - 29858014
Alignment:
Q  220 acccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggc 319  Q
    ||||| |||| ||| ||| |||||||  |||||||||  | |||||||||||| ||| ||||||||||||||||||||    |   |||||| |||||||    
T  29858124 acccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattcccctcggtgccaatttaggtgggc 29858025  T
Q  320 taatttagctt 330  Q
    |||||||||||    
T  29858024 taatttagctt 29858014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 31408158 - 31408084
Alignment:
Q  259 gagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||||||| |||||||| ||||||||||||| |||||   |||||||  | ||| ||||||||||||||    
T  31408158 gagagtgtgctcctcctcaaggtttcaggttcgattctctctaatgtcaatttaagggggttaatttagcttctt 31408084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 300
Target Start/End: Complemental strand, 35690137 - 35690059
Alignment:
Q  222 ccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||| |||| |||||||||||  ||||||||  || | || ||||||| |||||||||||||||||||||| ||||    
T  35690137 ccatttgtgttggcctagtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctct 35690059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 13129666 - 13129779
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||||| |||||||  || ||||| ||  | |||||||||| ||||| |||||| |||||||| ||||||||||||| |||| |   |||||||| ||    
T  13129666 taaacccacttgggttagcccagtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggttcgattctctctggtgccaatttggatg 13129765  T
Q  317 ggctaatttagctt 330  Q
    |  |||||||||||    
T  13129766 gattaatttagctt 13129779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 11793598 - 11793482
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| ||||||||  || ||||| | |||||||||| |  |||||||||||| |||||||||| ||||| |||||   |  |   ||||||||||||    
T  11793598 aaacccacttgggttggtcttgtggtgttcgcttgggaccttggagtgtgctcctcctcaaggtcttaggtttgattcttcccggtgccaatttgggtgg 11793499  T
Q  318 gctaatttagcttcttc 334  Q
    |||| ||||||||||||    
T  11793498 gctagtttagcttcttc 11793482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 18546407 - 18546323
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||| ||||||  ||||||| ||| |||||||||||||||||| | |  || ||||||| |||| | |||||||||||||||    
T  18546407 ttgggacctgagagcatgctcctcctcgaggtctcaggttcgattctcaccggcgtcaatttaggtgagataatttagcttcttc 18546323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 294
Target Start/End: Complemental strand, 24675549 - 24675513
Alignment:
Q  258 tgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    ||||||||||||||||||||||||||||| |||||||    
T  24675549 tgagagtgtgctccttctcaaggtctcagattcgatt 24675513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 28540454 - 28540498
Alignment:
Q  251 tgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||| ||||||||||||||||||| ||||||||||||| ||||    
T  28540454 tgggacatgagagtgtgctccttctctaggtctcaggttcaattc 28540498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 7140753 - 7140823
Alignment:
Q  263 gtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||| ||| || |||||| |||||||| |||  | ||||||||||||||||||||||| |||||||    
T  7140753 gtgtgctcctcctcgagctctcagattcgattctctcg-gtatcaatttgggtgggctaatttaccttcttc 7140823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 12281494 - 12281569
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||||||| ||||||  || |||||||  ||||||||| ||||||||||| ||| ||| ||||||||| |||||||    
T  12281494 aacccattagggttgttcttgtggtattggcttgggacctgagagtgtgcccctcctcgaggtctcagattcgatt 12281569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 12988427 - 12988502
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgat 293  Q
    ||||||| |||| ||| |||||||||||  |||||| || ||  ||||||||||| |||||||| |||||||||||    
T  12988427 aaacccacttggattggcctagtggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgat 12988502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 22751782 - 22751851
Alignment:
Q  343 gaattcccctttatata--caaataaagag--aacattctagtatttaactctaatgggcctcttattat 408  Q
    |||||||||||||||||  || ||||||||  |||||||||||||||||  ||||||||||| |||||||    
T  22751782 gaattcccctttatatatacagataaagagagaacattctagtatttaatcctaatgggcctattattat 22751851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 311
Target Start/End: Original strand, 26061717 - 26061780
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaattt 311  Q
    ||||| ||||||||||| ||||||||||||| |||||| ||||||||  |||||| || |||||    
T  26061717 gcttgagacttgagagtatgctccttctcaatgtctcatgttcgattatctctagtattaattt 26061780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 333
Target Start/End: Original strand, 28560614 - 28560720
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    ||||||||  ||||||||||  | ||||||| | |||||||||||||| |||||| |||| ||||||||| ||||||    ||||| |||||| ||||||    
T  28560614 ttgggttgaactagtggtattggtttgggaccttagagtgtgctccttttcaagg-ctcatgttcgattctctctagtgctaatttaggtgggttaattt 28560712  T
Q  326 agcttctt 333  Q
    || |||||    
T  28560713 agtttctt 28560720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 30483960 - 30483845
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| || ||||||||  ||||||||  || |||||||||||| ||||  ||||||||||| |||| |||| |   |||||||  |||     
T  30483960 aacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttcaattctctcttgtgccaatttgaatgga 30483861  T
Q  319 ctaatttagcttcttc 334  Q
    |||||||| |||||||    
T  30483860 ctaatttatcttcttc 30483845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 21566816 - 21566782
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||||||||| ||||||||||||||||||||||    
T  21566816 gagtgtgctcctactcaaggtctcaggttcgattc 21566782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 333
Target Start/End: Complemental strand, 23874458 - 23874345
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||||||||||  ||||||||| || || | ||| ||| ||| |||||||||||||| |||   ||||   |||||| ||||||    
T  23874458 aacccacttgggttggcctagtggtattggcttgggacctgggaatctgcgcctcctcgaggtctcaggttcg-ttcttcctagtgacaatttaggtggg 23874360  T
Q  319 ctaatttagcttctt 333  Q
    |||||||| ||||||    
T  23874359 ctaatttaacttctt 23874345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 33017257 - 33017295
Alignment:
Q  262 agtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  33017257 agtgtgctcctcctcaaggtctcaggttcgattctctct 33017295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 273 - 311
Target Start/End: Original strand, 36094734 - 36094772
Alignment:
Q  273 tctcaaggtctcaggttcgattccctctagcatcaattt 311  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  36094734 tctcaaggtctcaggttcgattccctctggtatcaattt 36094772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 5264542 - 5264611
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcag 286  Q
    |||||||| |||||||| |||||||||||  |||||| || || || ||||||||| ||| |||||||||    
T  5264542 taaacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtctcag 5264611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 334
Target Start/End: Complemental strand, 8794403 - 8794307
Alignment:
Q  237 tagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||  |||||| || ||  ||||||||||| |||| ||||||||||||||||| |||| | | ||||||  | ||| |||||||||||||||    
T  8794403 tagtggtattggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgattctctctggtaccaatttaag-gggttaatttagcttcttc 8794307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 4698869 - 4698825
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    ||||||||||||||||||||||| |  ||||||| ||||||||||    
T  4698869 aggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 4698825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 4830486 - 4830558
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttc 290  Q
    ||||||| |||||||| ||| |||||||  | ||||||  |||||||||| |||| ||| |||||||||||||    
T  4830486 aaacccacttgggttggcctggtggtatttgtttgggatctgagagtgtgttcctcctcgaggtctcaggttc 4830558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 6530807 - 6530882
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||| |||||||| ||| ||||| |  ||||||||| |  |||||||||||| ||||| ||||||||||||||||    
T  6530807 aacccacttgggttggcctggtggtgttggcttgggacctaggagtgtgctcct-ctcaatgtctcaggttcgattc 6530882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 334
Target Start/End: Original strand, 7347896 - 7347952
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||| |||||||| |||| |||| |  ||||||| ||||||||||||||||||||||    
T  7347896 aggtttcaggttcaattctctcttgtgtcaatttaggtgggctaatttagcttcttc 7347952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 258 - 334
Target Start/End: Original strand, 8059671 - 8059747
Alignment:
Q  258 tgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||| |||| ||||||||||||||||| |||| | ||    |||||||| ||| |||| ||||||||||||    
T  8059671 tgagagtgtgatcctcctcaaggtctcaggttccattctccctgatgtcaatttgagtgagctagtttagcttcttc 8059747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 22751624 - 22751656
Alignment:
Q  35 tggtaattaaggaaaatagggtgctttattgat 67  Q
    |||||||||||||||||| ||||||||||||||    
T  22751624 tggtaattaaggaaaatatggtgctttattgat 22751656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 334
Target Start/End: Complemental strand, 40791960 - 40791856
Alignment:
Q  230 gttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagct 329  Q
    |||| ||| |||||||  || |||||| | ||| ||||||||| ||  | |||| ||||||||||  ||||||  |||||||  ||||||||||||||||    
T  40791960 gttgtcctggtggtattggcctgggacctcagaatgtgctcctccttgaagtcttaggttcgattttctctagtgtcaatttaagtgggctaatttagct 40791861  T
Q  330 tcttc 334  Q
    |||||    
T  40791860 tcttc 40791856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 44595889 - 44595817
Alignment:
Q  262 agtgtgctccttc-tcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||||||| |||| |||| ||||||||||| || |||  ||||||| | ||| |||||||||||||||    
T  44595889 agtgtgctccttcctcaacgtcttaggttcgattctctttagtgtcaatttagatggactaatttagcttctt 44595817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 88; Significance: 5e-42; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 29 - 218
Target Start/End: Original strand, 242873 - 243061
Alignment:
Q  29 aacagatggtaattaaggaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagtaaagc 128  Q
    |||||||||||||||||||||||||| |  || ||| ||| |||||||||| ||||| |||| ||||| ||||||||||||||||||||||||| |||||    
T  242873 aacagatggtaattaaggaaaataggatatttcatttatacgaatgaaaatggtaaaatagtagaagagagagtttctctaactactcccagagcaaagc 242972  T
Q  129 tccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactcta-aactcctaagaattcccctttata 218  Q
    |||||||||||||  | | |||||||| | | ||||||||||||||||| | |||||||||||||| ||||| ||||||| | ||||||||    
T  242973 tccgacacaactc--ataagaatcctaatctggccctaaacagaaaacttattccgtcatactctataactcttaagaatactcctttata 243061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 379
Target Start/End: Original strand, 247357 - 247393
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattcta 379  Q
    |||||||||||||||||||||||||||||||||||||    
T  247357 gaattcccctttatatacaaataaagagaacattcta 247393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 247241 - 247299
Alignment:
Q  81 gtaaactagtggaagaaagagtttctctaactactcccagagtaaagctccgacacaac 139  Q
    ||||| |||| ||||| |||||||||||||||||||| |||| || || ||||||||||    
T  247241 gtaaaatagtagaagagagagtttctctaactactcctagagcaatgcaccgacacaac 247299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 5e-42; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 8075203 - 8075088
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||||||||  ||||||||||||||    
T  8075203 aacctatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaatttgggtggg 8075104  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  8075103 ctaatttagcttcttc 8075088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 219 - 326
Target Start/End: Original strand, 8170672 - 8170779
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    ||||||||||||||| |||||||||||  |||||  ||||| |||||||||||| ||||||||||||||||||||| ||||| |  ||||||||||||||    
T  8170672 aacccatttgggttggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgatttcctctggtgtcaatttgggtggg 8170771  T
Q  319 ctaattta 326  Q
    ||||||||    
T  8170772 ctaattta 8170779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 223 - 334
Target Start/End: Original strand, 49452884 - 49452987
Alignment:
Q  223 catttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    |||||||||||||||||||||||| ||||||||       |||||||||| ||||||||||||||||| | |||||||||  ||||||||| ||||||||    
T  49452884 catttgggttgccctagtggtataggcttggga-------gtgtgctcctcctcaaggtctcaggttc-aatccctctagtgtcaatttggatgggctaa 49452975  T
Q  323 tttagcttcttc 334  Q
    |||| |||||||    
T  49452976 tttaacttcttc 49452987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 223 - 334
Target Start/End: Original strand, 2667866 - 2667977
Alignment:
Q  223 catttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    ||||||||||| ||| |||||||  ||||||||  || |||||||||| | ||| |||||||||||||||||  ||||||  ||||||| |||||||||     
T  2667866 catttgggttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaatttaggtgggctag 2667965  T
Q  323 tttagcttcttc 334  Q
    ||||||||||||    
T  2667966 tttagcttcttc 2667977  T

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Target: chr3; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 14339610 - 14339725
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||| ||| ||| |||||||  |||||||| ||| |||||||||||| ||||| |||||||||||||||| | ||||   |||||  ||||||    
T  14339610 aacccagttggattggcctggtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtggg 14339709  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  14339710 ctaatttagcttcttc 14339725  T

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Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 27093438 - 27093356
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||| |||||||| |||||||||||  |||||| ||||| |||||||||||| |||||||||||||||| ||||| ||||    
T  27093438 aaacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctct 27093356  T

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Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 217 - 295
Target Start/End: Original strand, 30311304 - 30311382
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||||  ||||||| |||||||||||| ||||||||  || |||||||||||| ||||||||||||||||||||||    
T  30311304 taaacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattc 30311382  T

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Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 10445216 - 10445100
Alignment:
Q  219 aacccatttgggttgccctagtggta-tacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    |||||| |||||||| |||||||| | |  ||||||||| || |||||||||||| ||| |||||||||||||||||| |||| |    |||||| ||||    
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtgg 10445117  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  10445116 gctaatttagcttcttc 10445100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 30078000 - 30078121
Alignment:
Q  49 aatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagtaaagctccgacacaactcagagacg 148  Q
    ||||||||||||||||| ||||||||||||||||||| |||| | | |||||  ||||||||||| || ||||| ||||||   ||||||||||||||      
T  30078000 aatagggtgctttattggtatgaatgaaaatagtaaaatagtaggataaaga--ttctctaactattctcagagcaaagcttacacacaactcagagaaa 30078097  T
Q  149 aatcctactttagccctaaacaga 172  Q
    ||| ||||| |  |||||||||||    
T  30078098 aattctactctgaccctaaacaga 30078121  T

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Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 333
Target Start/End: Original strand, 36720379 - 36720495
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||||| ||||||||  || |||||||  ||||||||  || |||||||||||| ||| |||| ||||||||||||| ||||||  ||||||| ||||    
T  36720379 taaacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctctagtgtcaatttaggtg 36720478  T
Q  317 ggctaatttagcttctt 333  Q
    ||||  |||||||||||    
T  36720479 ggctggtttagcttctt 36720495  T

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Target: chr3; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 218 - 333
Target Start/End: Original strand, 19154630 - 19154745
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    |||||||||||||||| |||||| ||||  ||||| | | ||||||||||||||| || ||||||||||||||||||| || |    |||||||||||||    
T  19154630 aaacccatttgggttggcctagttgtattggcttgaggcctgagagtgtgctcctcctaaaggtctcaggttcgattctctttgatgtcaatttgggtgg 19154729  T
Q  318 gctaatttagcttctt 333  Q
    | || ||||| |||||    
T  19154730 gttagtttagtttctt 19154745  T

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Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 219 - 333
Target Start/End: Complemental strand, 27923119 - 27923005
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| || ||||| ||| |||||||  ||||||||| ||  ||||||||||| ||||  |||||||||||||||||| |  |  |||||||||||||     
T  27923119 aacccacttaggttggcctggtggtattggcttgggacatggaagtgtgctcctcctcatagtctcaggttcgattcccacctgtgtcaatttgggtgga 27923020  T
Q  319 ctaatttagcttctt 333  Q
    |||||||||||||||    
T  27923019 ctaatttagcttctt 27923005  T

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Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 343 - 401
Target Start/End: Complemental strand, 48294773 - 48294715
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctc 401  Q
    ||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  48294773 gaattcctctttatatacaaataaagagaacatactattatttaaccctaatgggcctc 48294715  T

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Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 320
Target Start/End: Original strand, 14186648 - 14186748
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||||||||||   |||||||| || |||||||||||| |||||||||||||||||||||| |||  |  ||||||| ||||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacctg-gagtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaatttaggtggg 14186746  T
Q  319 ct 320  Q
    ||    
T  14186747 ct 14186748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 16354968 - 16354887
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||| |||||||| |||||||||||  |||||| || || |||||||||||| |||| ||||||||||||||||| ||||    
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctct 16354887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 52770017 - 52769944
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||| ||  |||||||||||||||||| || |||  ||||||| ||||||||||||||||||||||    
T  52770017 gagtgtgctcctccttgaggtctcaggttcgattctctttagtgtcaatttaggtgggctaatttagcttcttc 52769944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 10499186 - 10499070
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| ||| |||||||  ||||||||  || |||| ||||| | ||  |||||||||||||||||| |||     |||||||||||||    
T  10499186 aaacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttgggtgg 10499087  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  10499086 gctaatttagcttcttc 10499070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 19341801 - 19341861
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaag 279  Q
    ||||||||||||||||||||||||||||  |||| |||||| |||||||||||| ||||||    
T  19341801 aacccatttgggttgccctagtggtatagacttgagacttgggagtgtgctcctcctcaag 19341861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 20501727 - 20501810
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||| ||||||||||||||| || ||||||||||||||||||| ||| ||   ||||||| | |||||||||||||||||||    
T  20501727 ttgggacctgagagtgtgctcctccttaaggtctcaggttcgattctctccagtgccaatttgag-gggctaatttagcttcttc 20501810  T

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Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 21960551 - 21960627
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||| ||||||||| || |||||||  ||||||||| ||||||||||||||| ||| ||||||||| ||||||||    
T  21960551 aacccaattgggttgcgctggtggtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattc 21960627  T

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Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 226 - 330
Target Start/End: Complemental strand, 30510268 - 30510164
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| ||| ||||||   ||||||||| |  |||| ||||||||||| |||||||||||||||||| ||||||  ||||| |  ||||||||||||    
T  30510268 ttgggttgtcctggtggtactggcttgggacctaggagtatgctccttctcgaggtctcaggttcgattctctctagtgtcaatctaagtgggctaattt 30510169  T
Q  326 agctt 330  Q
    |||||    
T  30510168 agctt 30510164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 218 - 330
Target Start/End: Complemental strand, 31520682 - 31520570
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| ||| |||| ||  ||||||||  || |||||||||||| ||| |||||| ||||| ||||| ||| ||  |||||||| ||||    
T  31520682 aaacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaatttgagtgg 31520583  T
Q  318 gctaatttagctt 330  Q
    |||||||||||||    
T  31520582 gctaatttagctt 31520570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 32651503 - 32651407
Alignment:
Q  230 gttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattta 326  Q
    |||| |||||||||||  ||||||||| || |||||||||||| |||||| |||||| |||||||| ||||||  ||||||| | ||||||| ||||    
T  32651503 gttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctctagtgtcaatttagatgggctagttta 32651407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 39976477 - 39976433
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgat 293  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  39976477 cttgggacttgagagtgtgctccttctcaaggtctcaagttcgat 39976433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 289
Target Start/End: Original strand, 7975417 - 7975488
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggtt 289  Q
    |||||||||| ||||| |||||||||||| ||||||||  || |||||||||||| |||||||||| |||||    
T  7975417 aaacccatttaggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtcttaggtt 7975488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 334
Target Start/End: Complemental strand, 51903946 - 51903839
Alignment:
Q  227 tgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattta 326  Q
    ||||||| |||  ||||||  ||||||||  || |||||||||||| |||  ||||||||||||||||| |||  |  |||||||| |||||||||||||    
T  51903946 tgggttgacctgttggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgggctaattta 51903847  T
Q  327 gcttcttc 334  Q
    ||||||||    
T  51903846 gcttcttc 51903839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 219 - 333
Target Start/End: Complemental strand, 37788541 - 37788428
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| || ||||||||   ||||| || |  |||||||||||| |||||||||||||||||||||| ||||||   ||||||| | |||    
T  37788541 aacccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgag-ggg 37788443  T
Q  319 ctaatttagcttctt 333  Q
     ||||||||||||||    
T  37788442 ttaatttagcttctt 37788428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 248 - 334
Target Start/End: Complemental strand, 44743902 - 44743816
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||  || |||||||||||| ||| |||||||||||||||||  ||| ||   ||||||||||||| |||||||||||||||    
T  44743902 gcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttcttc 44743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 213 - 294
Target Start/End: Complemental strand, 15048143 - 15048062
Alignment:
Q  213 tttataaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||| ||||||| |||||||| | || ||||||| ||||||||  || || ||||||||| |||||||||||||||||||||    
T  15048143 tttagaaacccacttgggttggcttaatggtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgatt 15048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 33899656 - 33899725
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagctt 330  Q
    |||||||||||| ||| |||||||||||||||||| || | |  |||||||||||| |||||||||||||    
T  33899656 gagtgtgctcctcctctaggtctcaggttcgattctctttggtgtcaatttgggtgtgctaatttagctt 33899725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 16213018 - 16212934
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||| |||||| |||||||||||| || ||||||||| |||| |||| |||  | |||||||||| ||| |||||||||||||||    
T  16213018 cttgagacttgggagtgtgctcctccttaaggtctcaagttcaattcactccggtatcaatttggatggactaatttagcttctt 16212934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 223 - 334
Target Start/End: Complemental strand, 4844583 - 4844472
Alignment:
Q  223 catttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    |||||||||||  || |||||||   |||||||  || |||||||||||| ||| |||||||||| ||||||| |||  |   ||||||| |||||||||    
T  4844583 catttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaa 4844484  T
Q  323 tttagcttcttc 334  Q
    ||||||||||||    
T  4844483 tttagcttcttc 4844472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 223 - 334
Target Start/End: Complemental strand, 4870279 - 4870168
Alignment:
Q  223 catttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    |||||||||||  || |||||||   |||||||  || |||||||||||| ||| |||||||||| ||||||| |||  |   ||||||| |||||||||    
T  4870279 catttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaa 4870180  T
Q  323 tttagcttcttc 334  Q
    ||||||||||||    
T  4870179 tttagcttcttc 4870168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 48294854 - 48294759
Alignment:
Q  124 aaagctccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactctaa-actcctaagaattcccctttata 218  Q
    |||||||||||  |||||| ||| |||||||||| | | ||||||||||||||| | |||||| |||||||| | ||| ||||||||| |||||||    
T  48294854 aaagctccgacgtaactcaaagaggaatcctactctggtcctaaacagaaaacttattccgtcctactctaatattccaaagaattcctctttata 48294759  T

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Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 333
Target Start/End: Original strand, 4222141 - 4222255
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| | |||||||||  ||||||||  || |||||||||||| ||||| |||| ||||||||||| |||| |  ||||||| |||| |    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaatttaggtgag 4222240  T
Q  319 ctaatttagcttctt 333  Q
     || |||| ||||||    
T  4222241 ttagtttaacttctt 4222255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 300
Target Start/End: Original strand, 46518627 - 46518709
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||| |||||||| | |||||||||  ||||||||  || |||||||||||| |||||||| ||||||| ||||| ||||    
T  46518627 aaacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctct 46518709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 11642287 - 11642210
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||||||| |||| ||| |||| |||||||  |||||||  ||||| |||| |||| |||||||||||||||||||||    
T  11642287 taaacccacttggattggcctactggtataaacttgggatctgagattgtgatcctcctcaaggtctcaggttcgatt 11642210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 34844370 - 34844450
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctc 299  Q
    ||||||| |||||||||||| ||| | |  ||||| ||| |  |||||||||||| ||||||||||||||||||||||||||    
T  34844370 aaacccacttgggttgccctggtgttgttggcttgagaccttggagtgtgctcct-ctcaaggtctcaggttcgattccctc 34844450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 40777055 - 40777127
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||| |||||||||||||||| ||||| ||||||   |||||| ||||||||| ||||| ||||||    
T  40777055 gagtgtgctcct-ctcaaggtctcaggtttgattctctctagtgccaatttcggtgggctagtttagtttcttc 40777127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 7973599 - 7973671
Alignment:
Q  262 agtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||| ||||||| ||||| | ||||||||||| ||||    ||||||||||||| ||||||||||||||||    
T  7973599 agtgtgttccttcttaaggttttaggttcgattctctctgatgtcaatttgggtggactaatttagcttcttc 7973671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 13808918 - 13808846
Alignment:
Q  262 agtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||||| ||| ||||||||||||| |||| |||||   ||||||||| |||  |||||||||||||||    
T  13808918 agtgtgctcctcctctaggtctcaggttcaattctctctaatgtcaatttggatggattaatttagcttcttc 13808846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 326
Target Start/End: Complemental strand, 26972490 - 26972418
Alignment:
Q  254 gacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattta 326  Q
    |||||||||||||| || || || | |||||||||||||||||||| ||  ||||||||||| || |||||||    
T  26972490 gacttgagagtgtggtcattttcgatgtctcaggttcgattccctccagtgtcaatttgggtaggttaattta 26972418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 30715772 - 30715855
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||||| |||||||||||| ||||| || ||||||||||||| |||  |   |||||||| ||||||| |||||||||||    
T  30715772 cttgggacttgggagtgtgctcctcctcaatgtttcaggttcgattctctc-cgtgccaatttggatgggctagtttagcttctt 30715855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 8051212 - 8051294
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctc 299  Q
    |||||||| |||||||| ||| |||||||  ||||||||| ||  ||| |||| || ||| |||||||| |||||||||||||    
T  8051212 taaacccacttgggttggcctggtggtattggcttgggacctggcagtatgcttctcctcgaggtctcaagttcgattccctc 8051294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 293
Target Start/End: Original strand, 11612307 - 11612373
Alignment:
Q  227 tgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgat 293  Q
    ||||||| ||| ||||||| | |||||||  || |||||||||||| || |||||||||||||||||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcctccttaaggtctcaggttcgat 11612373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 26411575 - 26411621
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||||| ||||||||||||||||||||| || ||| |||||||||    
T  26411575 cttgggacctgagagtgtgctccttctcaatgtttcaagttcgattc 26411621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 330
Target Start/End: Complemental strand, 28531105 - 28531023
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagctt 330  Q
    ||||||||  || |||| ||||||| ||| |||||| ||| || |||| |||| |  ||||||||||||||||||||||||||    
T  28531105 gcttgggatctgggagtatgctcctcctcgaggtcttaggctcaattctctctggtgtcaatttgggtgggctaatttagctt 28531023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 334
Target Start/End: Original strand, 46552984 - 46553046
Alignment:
Q  272 ttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||||||||| |||||||| ||||||   ||||||||||||| || ||||| ||||||    
T  46552984 ttctcaaggtctcagattcgattctctctagtgccaatttgggtgggttagtttagtttcttc 46553046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 53412952 - 53413026
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||||  ||||||||||  |||||  || || |||||||||||| ||||||||||||||||| |||| ||||    
T  53412952 ttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctct 53413026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 3427587 - 3427546
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctag 302  Q
    |||||||||||| ||||||||||||| |||||||| ||||||    
T  3427587 gagtgtgctcctcctcaaggtctcagattcgattctctctag 3427546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 8796168 - 8796088
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||| |||||||| |||||||||||  ||  ||| |||| |||| ||||||| |||||||||||| ||||||||| ||||    
T  8796168 aacccacttgggttggcctagtggtatt-gccgggggcttgggagtatgctcctcctcaaggtctcaagttcgattctctct 8796088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 17035032 - 17035100
Alignment:
Q  265 gtgctccttctcaaggtctcaggttcgattc-cctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||| | |||||||||||||||||||||| ||||  | |||||||||||||| |||||||| ||||||    
T  17035032 gtgctcatcctcaaggtctcaggttcgattctcctc-ggtatcaatttgggtggactaatttaacttctt 17035100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 25035734 - 25035819
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||| ||||| ||||||||| ||| || | ||||||||||||| | |  |  |||||||||||||| ||||||| ||||||    
T  25035734 gcttgggacctgagaatgtgctcctcctcgagatttcaggttcgattctcaccggtgtcaatttgggtgggttaatttaccttctt 25035819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 28703480 - 28703399
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||| ||||||||  | |||| |||  ||||||||  || ||||||||||||  ||||||||||||||||||||| ||||    
T  28703480 aacccacttgggttggtccagtgatattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctct 28703399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 33464505 - 33464577
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||| | ||||||||||||||| ||| ||||| | |||  ||||||||| ||||||||||||| |||||||    
T  33464505 gagtgtgtttcttctcaaggtctcatgtttgattctccctat-atcaatttgagtgggctaatttaacttcttc 33464577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 33861768 - 33861699
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagctt 330  Q
    |||||||||||| ||| |||||| | ||||||||| | | |  |||||||| ||||||||||||||||||    
T  33861768 gagtgtgctcctcctcgaggtctaatgttcgattctccccaatatcaatttaggtgggctaatttagctt 33861699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 40133596 - 40133551
Alignment:
Q  277 aaggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    |||||||||||||||||||||||| |  ||||||| ||||||||||    
T  40133596 aaggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 40133551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 15566645 - 15566601
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    |||||||||||||||||||||||||   |||||| ||||||||||    
T  15566645 aggtctcaggttcgattccctctagtgccaatttcggtgggctaa 15566601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 25289860 - 25289816
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    |||||||||||||||||||||||||   |||||| ||||||||||    
T  25289860 aggtctcaggttcgattccctctagtgccaatttcggtgggctaa 25289816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 331
Target Start/End: Complemental strand, 31789046 - 31788935
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||||||| |||  ||||||||  || |||||||||||| ||| |||| | ||||| ||||  |||| |  ||||||||||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggttttaggtttgattatctct-gtgtcaatttgggtggg 31788948  T
Q  319 ctaatttagcttc 331  Q
    ||| |||| ||||    
T  31788947 ctagtttaacttc 31788935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 45308947 - 45308903
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||||||||| |||| ||||||| ||| |||||||||||||||||    
T  45308947 ttgggacttgtgagtatgctcctcctcgaggtctcaggttcgatt 45308903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 47454692 - 47454617
Alignment:
Q  220 acccatttgggttgccctagtggtatacgcttggga-cttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||| ||||||||  ||||||||||  ||||| || |||| |||||||||||| ||| ||||||||||||||||||    
T  47454692 acccacttgggttgttctagtggtattggcttgagatcttg-gagtgtgctcctcctcgaggtctcaggttcgattc 47454617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 49258408 - 49258364
Alignment:
Q  278 aggtctcaggttcgattccctctagcatcaatttgggtgggctaa 322  Q
    |||||||||||||||||||||||||   |||||| ||||||||||    
T  49258408 aggtctcaggttcgattccctctagtgccaatttcggtgggctaa 49258364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 1e-39; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 8030280 - 8030165
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||| |||||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||||||||||||||||  ||||||||||||||    
T  8030280 aacccacttggattgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtggg 8030181  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  8030180 ctaatttagcttcttc 8030165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 219 - 333
Target Start/End: Original strand, 31826609 - 31826723
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| ||||||||||||||||||||| |||||||| ||| |||||||||||| |||||||||||| |||||||||||| |||  ||||||||||||||    
T  31826609 aacccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattccctttagtgtcaatttgggtggg 31826708  T
Q  319 ctaatttagcttctt 333  Q
    |||||||| ||||||    
T  31826709 ctaatttaccttctt 31826723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 101 - 218
Target Start/End: Original strand, 22517368 - 22517486
Alignment:
Q  101 gtttctctaactactcccagagtaaagctccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatact-ctaaactc 199  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||| ||||||  |||| |||||||| | ||||||    
T  22517368 gtttctctaactactcccagagcaaagctccgacacaactcagagaggaatcctactctggccctaaaccgaaaacctaatctgtcatactccaaaactc 22517467  T
Q  200 ctaagaattcccctttata 218  Q
     |||||| |||||||||||    
T  22517468 ataagaactcccctttata 22517486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 7949531 - 7949415
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| ||||| || ||||| |||||  ||||||||| |  |||||||||||| |||||||||||||||||||||| |||| |  ||||||| |||||    
T  7949531 aaacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgg 7949432  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  7949431 gctaatttagcttcttc 7949415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 101 - 216
Target Start/End: Original strand, 32632333 - 32632449
Alignment:
Q  101 gtttctctaactactcccagagtaaagctccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactcta-aactc 199  Q
    ||||||| |||||||||||| | ||||||||||||||||||||||| |||||||||| | |||||||||||||||   | |||||| ||||||| |||||    
T  32632333 gtttctccaactactcccagggcaaagctccgacacaactcagagaggaatcctactctggccctaaacagaaaatctattccgtcctactctagaactc 32632432  T
Q  200 ctaagaattccccttta 216  Q
    ||||| |||| ||||||    
T  32632433 ctaaggattctccttta 32632449  T

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Target: chr4; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 56126173 - 56126244
Alignment:
Q  102 tttctctaactactcccagagtaaagctccgacacaactcagagacgaatcctactttagccctaaacagaa 173  Q
    |||||||||||| ||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  56126173 tttctctaactattcccagagtaaagttccgacacaactcagtgaggaatcctactttagccctaaacagaa 56126244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 266 - 334
Target Start/End: Complemental strand, 9693527 - 9693459
Alignment:
Q  266 tgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||    
T  9693527 tgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttaccttcttc 9693459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 35 - 216
Target Start/End: Complemental strand, 20953758 - 20953582
Alignment:
Q  35 tggtaattaaggaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagtaaagctccgac 134  Q
    |||||||||||||||||| |||||||||||||||  ||| ||||||||| |  ||        ||||||||||||||||||||||||| |||||||||||    
T  20953758 tggtaattaaggaaaatatggtgctttattgatagtaattaaaatagtataaaag--------agagtttctctaactactcccagagcaaagctccgac 20953667  T
Q  135 acaactcagagacgaatcctactttagccctaaa--cagaaaactcaatccgtcatactcta-aactcctaagaattccccttta 216  Q
    |||| ||  ||| |||||||||| || |||||||   | |||||| | ||| ||||| |||| |||||||||||||||| |||||    
T  20953666 acaattcgaagaagaatcctactctaaccctaaaataaaaaaacttattccttcatattctagaactcctaagaattcctcttta 20953582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 219 - 330
Target Start/End: Complemental strand, 19238653 - 19238542
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| |||||||  |||||||||||| |||||||||||| ||| ||||||| |||||||||| | |  | | |||||||||||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctccccggtaccaatttgggtggg 19238554  T
Q  319 ctaatttagctt 330  Q
    ||||||||||||    
T  19238553 ctaatttagctt 19238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 347 - 405
Target Start/End: Original strand, 22517476 - 22517534
Alignment:
Q  347 tcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttat 405  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  22517476 tcccctttatatacaaataaagagaacattctagtatataaccctaatgggcctcttat 22517534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 37109427 - 37109346
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||| |||||||| |||||||||||  ||||||||| || |||||||||||| |||||||||||||||||||||| ||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctct 37109346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 37720291 - 37720175
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| ||| ||| |||  ||||||||| || |||||||| ||| ||||||||| |||||||||||| | |  | |||||||| |||||    
T  37720291 aaacccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggtcccaggttcgattctcccagggatcaatttaggtgg 37720192  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  37720191 gctaatttagcttcttc 37720175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 226 - 334
Target Start/End: Complemental strand, 49576963 - 49576855
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| ||| |||||||  |||| ||||||| |||||||||||| |||||||||||||||||||||| ||| |   ||||||||||||| |||| ||    
T  49576963 ttgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctccaatgtcaatttgggtggactaactt 49576864  T
Q  326 agcttcttc 334  Q
    | |||||||    
T  49576863 aacttcttc 49576855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 219 - 330
Target Start/End: Complemental strand, 19229283 - 19229173
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    ||||||||||||||| ||| |||||||  || |||||||| ||| ||||||||| ||| |||||||||||||||||| | || | | |||||||||||||    
T  19229283 aacccatttgggttggcctggtggtattggcctgggactt-agaatgtgctcctcctcgaggtctcaggttcgattctccctggtaccaatttgggtggg 19229185  T
Q  319 ctaatttagctt 330  Q
    || |||||||||    
T  19229184 cttatttagctt 19229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 19680866 - 19680783
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||||| |||| ||| ||||||||||| ||||||||||||| |||||||||| | |||||||||| ||||||||||| ||||    
T  19680866 taaacccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctct 19680783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 239 - 334
Target Start/End: Complemental strand, 49262740 - 49262645
Alignment:
Q  239 gtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||| ||||||||||||||||||||||||||| |  |||||||||||||||||| | | ||   |||||| ||||||||||||||| ||||||    
T  49262740 gtggtattcgcttgggacttgagagtgtgctccttgttgaggtctcaggttcgattctccccagtgccaatttaggtgggctaatttagtttcttc 49262645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 218 - 333
Target Start/End: Complemental strand, 51250599 - 51250484
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| ||| |||||||  ||||||||  || |||||||||||  |||||| ||||| |||||||||||||  |   ||||||||||||    
T  51250599 aaacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtgg 51250500  T
Q  318 gctaatttagcttctt 333  Q
    ||||||||||||||||    
T  51250499 gctaatttagcttctt 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 23377985 - 23378071
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||| || |||||||||||| |||||||||||||||||||||| ||||||   ||||||| | |||||| ||||||||||||    
T  23377985 gcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagtttagcttcttc 23378071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 31759734 - 31759658
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||| ||||||||  ||||||||||  |||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  31759734 aacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgattc 31759658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 235 - 334
Target Start/End: Original strand, 38869784 - 38869883
Alignment:
Q  235 cctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||  ||||||||  || |||||||||||| ||||||||||||||||||||||||||| |   ||||||| | ||| || ||||||||||||    
T  38869784 cctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaatttgagggggttagtttagcttcttc 38869883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 23500225 - 23500288
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    |||||||||||||||| ||||||||||||||||| | |  ||||||||||||||||||||||||||    
T  23500225 gaattcccctttatattcaaataaagagaacattatgg--tttaactctaatgggcctcttattat 23500288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 334
Target Start/End: Original strand, 51954144 - 51954229
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||||| |||| ||||||| ||| |||||||||||| ||||  |||  |  ||||||||||||||||||||||||||||||    
T  51954144 cttgggacttgggagtatgctcctcctcgaggtctcaggtttgattatctccggtgtcaatttgggtgggctaatttagcttcttc 51954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 56126274 - 56126331
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcct 400  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| || ||||||||    
T  56126274 gaattcccctttaaatacaaataaagagaacattctattatttaaccctcatgggcct 56126331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 226 - 334
Target Start/End: Complemental strand, 7292867 - 7292759
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    ||||||||  ||||||||||  |||||| || || |||||||||||| ||||| |||||||||||||||| ||||||   ||||||| | ||| || |||    
T  7292867 ttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaatttgagggggttagttt 7292768  T
Q  326 agcttcttc 334  Q
    |||||||||    
T  7292767 agcttcttc 7292759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 255 - 331
Target Start/End: Original strand, 21375813 - 21375889
Alignment:
Q  255 acttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttc 331  Q
    |||||||||||||||||| |||||| |||||| ||||||||  |||||  ||||||||| |||| ||||||||||||    
T  21375813 acttgagagtgtgctcctcctcaagctctcagattcgattctttctagtgtcaatttggatgggttaatttagcttc 21375889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 37274536 - 37274420
Alignment:
Q  219 aacccatttgggttgccctagtggta-tacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    |||||| |||||||| |||||| ||| |  ||||||||| || |||||||||||| |||||||||| ||||||||||| |||| |    |||||  ||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgg 37274437  T
Q  318 gctaatttagcttcttc 334  Q
    |||||||||||||||||    
T  37274436 gctaatttagcttcttc 37274420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 47386828 - 47386752
Alignment:
Q  258 tgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||| ||| |||||  ||||||||||||| |||| ||||||  ||||||| ||||||||||||||||||||||    
T  47386828 tgagagtgcgcttcttcttgaggtctcaggttcaattctctctagtgtcaatttaggtgggctaatttagcttcttc 47386752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 51622527 - 51622599
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||||| ||||||||||||||||||| || |||| |   |||||||||||||| |||||||||||||    
T  51622527 gagtgtgctcctcctcaaggtctcaggttcgactctctctggtgccaatttgggtgggccaatttagcttctt 51622599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 334
Target Start/End: Original strand, 4249193 - 4249292
Alignment:
Q  235 cctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||| |||||||| ||  |||||||||||| |||||||||||||||| ||||| |||| |   ||||||| | ||| || ||||||||||||    
T  4249193 cctagtggtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgagggggttagtttagcttcttc 4249292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 28635696 - 28635811
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| ||||||    |||||||  || |||||||||||| ||  |||||| ||||||||||| |||| |   |||||||||||||    
T  28635696 aacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtggg 28635795  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  28635796 ctaatttagcttcttc 28635811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 402
Target Start/End: Original strand, 32632467 - 32632510
Alignment:
Q  359 acaaataaagagaacattctagtatttaactctaatgggcctct 402  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  32632467 acaaataaagagaacattctagtatttaaccctaatgggcctct 32632510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 333
Target Start/End: Original strand, 41683756 - 41683863
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| |||||||||||  |||||| || ||||||||||||||||||||| || ||| |||| ||||  |||||   |||||| |||||| ||||||    
T  41683756 ttgggttgacctagtggtattggcttggaacctgagagtgtgctccttctcaaagtttcacgttcaattctttctagtgccaatttaggtgggttaattt 41683855  T
Q  326 agcttctt 333  Q
    || |||||    
T  41683856 agtttctt 41683863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 46545711 - 46545786
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||||| |||||||| |||||||||||  ||||| ||| ||||||||||||||| |||||| |||||| |||||||    
T  46545711 aacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgatt 46545786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 330
Target Start/End: Complemental strand, 55427276 - 55427165
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| |||||||  ||||||||| || |||| ||||||| ||| |||||||||||||||||| |    |   |||||||||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaatttgggtggg 55427177  T
Q  319 ctaatttagctt 330  Q
    ||||||||||||    
T  55427176 ctaatttagctt 55427165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 236 - 330
Target Start/End: Original strand, 13015444 - 13015538
Alignment:
Q  236 ctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagctt 330  Q
    ||||||||||  |||||||||||| |||||||||||| ||| | |||||| ||||||||| |||  |  ||||||| |||||| |||||||||||    
T  13015444 ctagtggtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtcaatttaggtgggttaatttagctt 13015538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 219 - 300
Target Start/End: Complemental strand, 1730565 - 1730484
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||| |||||||| |||||||||||  ||||||||| |||||||||||||||  |||| ||||||| ||| |||| ||||    
T  1730565 aacccacttgggttgacctagtggtattggcttgggacctgagagtgtgctcctcttcaaagtctcagattctattctctct 1730484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 37270402 - 37270447
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaac 388  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  37270402 gaatttccctttatatacaaataaagagaacattctattatttaac 37270447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 46295126 - 46295211
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||| |  |||||||||||| |||||||||||||||||||||| | |  |   |||||||||||||||| |||||||||||    
T  46295126 gcttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaatttgggtgggctagtttagcttctt 46295211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 2185112 - 2185032
Alignment:
Q  216 ataaacccattt-gggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||||| || |||||| ||||||||||   |||||| || || |||||||||||||||||| ||||||||||||||||    
T  2185112 ataaacccacttcgggttggcctagtggtaatggcttggaacctgggagtgtgctccttctcaaagtctcaggttcgattc 2185032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 10047997 - 10048061
Alignment:
Q  236 ctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||||||  ||||||||| | ||||| |||||||||||| ||||||||||||||||| ||||    
T  10047997 ctagtggtattggcttgggacctaagagtatgctccttctcatggtctcaggttcgattctctct 10048061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 23500096 - 23500160
Alignment:
Q  32 agatggtaattaaggaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaaga 96  Q
    ||||||||||| |  ||||||||||||||| |||||| |||||||||||||||| |||| |||||    
T  23500096 agatggtaattcaataaaatagggtgctttgttgatacgaatgaaaatagtaaaatagtagaaga 23500160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 334
Target Start/End: Original strand, 17618301 - 17618396
Alignment:
Q  239 gtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||  ||||| ||| || |||||||||||| ||| |||||||| ||||| |||||||  ||| |||||| ||| ||||| ||||||||||||    
T  17618301 gtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcatgttcgtttccctccggcaccaatttaggttggctagtttagcttcttc 17618396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 4185124 - 4185201
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttag 327  Q
    ||||||||| |||||||| |||| ||| |||||||| | ||||||| | ||||  ||||||| |||||||||||||||    
T  4185124 ttgggacttaagagtgtgatcctcctcgaggtctcaagatcgattctccctagtgtcaatttaggtgggctaatttag 4185201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 37270227 - 37270288
Alignment:
Q  22 aagaagtaacagatggtaattaaggaaaatagggtgctttattgatatgaatgaaaatagta 83  Q
    |||||| || |||||  ||||||||||||||||||||||||||||||  ||||| |||||||    
T  37270227 aagaagaaatagatgacaattaaggaaaatagggtgctttattgatagtaatgacaatagta 37270288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 8931129 - 8931085
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||    
T  8931129 ttgggacttgagagtgtgctcctcctgaaggtctcaagttcgatt 8931085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 330
Target Start/End: Complemental strand, 9937030 - 9936926
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| |||||||||||   |||| |||||| |||||||||||| ||| | || ||||||||||||| | |     |||||||||||||| ||||||    
T  9937030 ttgggttggcctagtggtatcgacttgagacttgggagtgtgctcctcctcgaagtttcaggttcgattctcaccgttgtcaatttgggtgggttaattt 9936931  T
Q  326 agctt 330  Q
    |||||    
T  9936930 agctt 9936926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 11592199 - 11592115
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||| ||||||||||||||| ||| |||||| ||||||||||  |||| | | ||||||| || || ||||||| ||||||    
T  11592199 cttgggacctgagagtgtgctcctcctccaggtcttaggttcgattatctctggaaccaatttgagttggttaatttaacttctt 11592115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 330
Target Start/End: Original strand, 24234652 - 24234755
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| ||  |||||||  |||||||||||| |||||||||| | || ||||||||| ||||||||| ||| ||  |||| || ||| |||||||||    
T  24234652 ttgggttgtccaggtggtattggcttgggacttgggagtgtgctcatcctgaaggtctcaagttcgattctctc-agagtcaaattaggtaggctaattt 24234750  T
Q  326 agctt 330  Q
    |||||    
T  24234751 agctt 24234755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 29195094 - 29195209
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| ||| ||||| |  ||||||||| |  ||||||||||| |||||||||| || ||||||||| |||||    |||||| ||| |    
T  29195094 aaacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcc-tctcaaggtcgcaagttcgattctctctaatgccaattttggttg 29195192  T
Q  318 gctaatttagcttcttc 334  Q
    |||| ||||||||||||    
T  29195193 gctagtttagcttcttc 29195209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 7539632 - 7539671
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||| |||||||||||||||||||||||||||||| ||||    
T  7539632 gagtatgctccttctcaaggtctcaggttcgattctctct 7539671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 46329193 - 46329240
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||||| || |||||||||||| |||||||| |||||||||||||    
T  46329193 gcttgggacctgggagtgtgctcctcctcaaggtatcaggttcgattc 46329240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 334
Target Start/End: Original strand, 2732043 - 2732109
Alignment:
Q  268 ctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||| ||||| |||||||||||||||| |||  |   |||||||||||||||| ||||||||||||    
T  2732043 ctcctcctcaaagtctcaggttcgattctctccggtgccaatttgggtgggctagtttagcttcttc 2732109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 334
Target Start/End: Complemental strand, 27105071 - 27104989
Alignment:
Q  252 gggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||| ||| |||||| |||||||| || |||| ||||||||||| |||  |  |||||||| ||||||||||||| |||||||    
T  27105071 gggatttgggagtgtactccttcttaaagtctgaggttcgattctctccggtgtcaatttgagtgggctaatttaacttcttc 27104989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 32992641 - 32992727
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||| |  |||||||||||| |||||||||||| ||||||||| | |  |  |||||||| |||| ||| ||||||||||||    
T  32992641 gcttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgtcaatttgagtggactagtttagcttcttc 32992727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 334
Target Start/End: Original strand, 34075557 - 34075622
Alignment:
Q  268 ctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||||||||||||| ||||| |||| | | |||||| | ||| ||||||||||||||||    
T  34075557 ctccttctcaaggtctcaggttagattctctct-gtaccaatttagatggactaatttagcttcttc 34075622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 248 - 330
Target Start/End: Original strand, 39509099 - 39509181
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagctt 330  Q
    ||||||||  || |||||||||||| ||| |||||||||||||||||| | | ||   |||||| |||||| |||||||||||    
T  39509099 gcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaatttaggtgggttaatttagctt 39509181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 56440443 - 56440517
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattc-cctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||||||||||| || |||||||| |||||||||| || |  |   |||||||||||||||||||||||||||||    
T  56440443 gagtgtgctcctccttaaggtctccggttcgattctccccgggggccaatttgggtgggctaatttagcttcttc 56440517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 8325413 - 8325344
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagctt 330  Q
    |||||||||| | |||||||||| ||||||||||| | |  |  ||||||||||||||||| ||||||||    
T  8325413 gagtgtgctcatcctcaaggtcttaggttcgattctccccggtgtcaatttgggtgggctagtttagctt 8325344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 295
Target Start/End: Complemental strand, 43408433 - 43408400
Alignment:
Q  262 agtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||||| ||||||||||||||||||||||||    
T  43408433 agtgtgctcattctcaaggtctcaggttcgattc 43408400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 2622442 - 2622390
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||||||| || |||||||||||| ||| | |||||||||||||||| ||||    
T  2622442 gcttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctct 2622390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 21660178 - 21660106
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||| | ||| |||||||| ||||||||  ||||||  ||||||| ||| | |||||||||||||||    
T  21660178 gagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtagactaatttagcttctt 21660106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 21668942 - 21668870
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||||| | ||| |||||||| ||||||||  ||||||  ||||||| ||| | |||||||||||||||    
T  21668942 gagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtagactaatttagcttctt 21668870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 26605746 - 26605674
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||||||||||||| | ||| ||||||||| | ||||  | | |||| ||| ||||||||||||||||    
T  26605746 gagtgtgctccttctcaagttttcaagttcgattctccctagtgttagtttgtgtgtgctaatttagcttctt 26605674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 294
Target Start/End: Complemental strand, 36421279 - 36421239
Alignment:
Q  254 gacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||||| |||||||||| |||||||||||||| ||||||||    
T  36421279 gacttgcgagtgtgctctttctcaaggtctcatgttcgatt 36421239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 47044717 - 47044793
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||| |||| ||| ||| |||||||   |||||||  ||||||| ||||||| ||| ||||||||||||||||||    
T  47044717 aacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgattc 47044793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 58389 - 58193
Alignment:
Q  22 aagaagtaacagatggtaattaaggaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccaga 121  Q
    |||||| |||||||||| ||||| |||| || ||||||||||||||| |||||||||| ||||| |||| | ||| |||| |||| |||||||||||| |    
T  58389 aagaagaaacagatggtgattaaagaaattaaggtgctttattgatacgaatgaaaatcgtaaa-tagtagtagagagagcttctataactactcccaaa 58291  T
Q  122 gtaaagctccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactcta-aactcctaagaattcccctttata 218  Q
    | |||||||||||| |||||||||| |||||||||| | || |||||||||||| | | || ||||||||||| | |||| |||||||||||||||||    
T  58290 gcaaagctccgacataactcagagaggaatcctactatggcgctaaacagaaaatttagtctgtcatactctagatctcccaagaattcccctttata 58193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 58207 - 58142
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  58207 gaattcccctttatatacaaataaagagaacaatctagtatgtaactctaatgtgcctcttattat 58142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 234 - 334
Target Start/End: Original strand, 20213056 - 20213156
Alignment:
Q  234 ccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||||||||||||||||| || |||||||||||| ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  20213056 ccctagtggtatacgcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 20213155  T
Q  334 c 334  Q
    |    
T  20213156 c 20213156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 234 - 334
Target Start/End: Original strand, 22107079 - 22107179
Alignment:
Q  234 ccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    ||||||||||||||||||||||| || |||||||||||| ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  22107079 ccctagtggtatacgcttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 22107178  T
Q  334 c 334  Q
    |    
T  22107179 c 22107179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 46 - 218
Target Start/End: Complemental strand, 17306336 - 17306168
Alignment:
Q  46 gaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagtaaagctccgacacaactcagag 145  Q
    |||||||||||| |||||||||||||||  ||||||| || |||| |||||  ||||||||||||||||||||| || ||||||||  || || ||||||    
T  17306336 gaaaatagggtgttttattgatatgaatagaaatagtcaaatagtagaaga--gagtttctctaactactcccatagcaaagctcc--cataattcagag 17306241  T
Q  146 acgaatcctactttagccctaaacagaaaactcaatccgtcatactctaaactcctaagaattcccctttata 218  Q
    | ||||| |||| || ||||||| |||||||| | | ||||||||||||||||||||||||||||| ||||||    
T  17306240 aggaatcatactctaaccctaaatagaaaacttatttcgtcatactctaaactcctaagaattcccttttata 17306168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 217 - 333
Target Start/End: Complemental strand, 14200025 - 14199909
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||||||||||||||| |||| |||||| ||||| |||||| |||||||||||| ||||||||||||| ||||||||| |||||  ||||||||||||    
T  14200025 taaacccatttgggttgctctagaggtataggcttgagacttgggagtgtgctcctcctcaaggtctcagattcgattccttctagtgtcaatttgggtg 14199926  T
Q  317 ggctaatttagcttctt 333  Q
    | |||||||||||||||    
T  14199925 gactaatttagcttctt 14199909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 29 - 216
Target Start/End: Complemental strand, 19139561 - 19139377
Alignment:
Q  29 aacagatggtaattaaggaaaatagggtgc-tttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactcccagagtaaag 127  Q
    ||||||||||||||||  |||| ||||||| |||||||||| ||||| ||||||||||  ||| |||||  ||||||||||||||||||||| || ||||    
T  19139561 aacagatggtaattaaataaaacagggtgcctttattgatacgaatggaaatagtaaaaaagtagaaga--gagtttctctaactactcccaaagcaaag 19139464  T
Q  128 ctccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtcatactct-aaactcctaagaattccccttta 216  Q
    |||||||||||||  |||| |||||||||| ||| |||||||| |||| | | ||||||  ||||| ||||||||||||||| |||||||    
T  19139463 ctccgacacaact--gagaggaatcctactctag-cctaaacataaaagttattccgtccaactctaaaactcctaagaatttcccttta 19139377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 17305009 - 17304944
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  17305009 gaattcccctttatatacaaataaagagaacattctaatatttaaccctaatgggcctcttattat 17304944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 12188380 - 12188264
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| |||||||| |||||||||||  ||||||||| || |||||||||||| |||||||| ||| ||||||||| ||||||   ||||||| | ||    
T  12188380 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttgagggg 12188281  T
Q  318 gctaatttagcttcttc 334  Q
    | || ||||||||||||    
T  12188280 gttagtttagcttcttc 12188264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 17305126 - 17304995
Alignment:
Q  87 tagtggaagaaagagtttctctaactactcccagagtaaagctccgacacaactcagagacgaatcctactttagccctaaacagaaaactcaatccgtc 186  Q
    |||| ||||| | |||||||| |||||||||||||| |||||||| | | ||||  |||| |||||||||| |   ||||||||||||||| | ||  ||    
T  17305126 tagtagaagagatagtttctcaaactactcccagagcaaagctccaatataactttgagaggaatcctactctgatcctaaacagaaaacttattctatc 17305027  T
Q  187 atactctaaactcctaagaattcccctttata 218  Q
    ||||| |||||| |||||||||||||||||||    
T  17305026 atactttaaacttctaagaattcccctttata 17304995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 21418470 - 21418585
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| |||||||  |||||||||||| |||||||||||| ||| | |||||| ||||||||| | ||||   |||||  ||||||    
T  21418470 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctccctagtgccaattaaggtggg 21418569  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  21418570 ctaatttagcttcttc 21418585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 3779339 - 3779420
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||| || ||||| |||||||||||  ||||| |||||| |||||||||||||||||||||||||| ||| |||||||||    
T  3779339 aacccacttaggttgacctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcagattcaattccctct 3779420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 217 - 334
Target Start/End: Complemental strand, 31623069 - 31622952
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||||| ||||||||  |  |||||||  ||||||||| || |||||||||||| ||| |||||||||||| || || |||  |  ||||||||||||    
T  31623069 taaacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaatttgggtg 31622970  T
Q  317 ggctaatttagcttcttc 334  Q
    ||||||||||||||||||    
T  31622969 ggctaatttagcttcttc 31622952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 333
Target Start/End: Complemental strand, 12234585 - 12234469
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||||| || ||||| ||| |||||||   |||||||| || ||||||||||| |||| |||||||||||||||||| ||| ||  ||||||| | ||    
T  12234585 taaacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctccagtgtcaatttagatg 12234486  T
Q  317 ggctaatttagcttctt 333  Q
    || ||||||||||||||    
T  12234485 ggataatttagcttctt 12234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 219 - 333
Target Start/End: Complemental strand, 15951378 - 15951264
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| ||| |||||||| ||||| || ||| |||||||||||| |||||||||||| |||| |||| |||| | | ||||||| | |||    
T  15951378 aacccagttgggttgtccttgtggtataagcttgagatttgggagtgtgctcctcctcaaggtctcatgttcaattctctctggtaccaatttgagaggg 15951279  T
Q  319 ctaatttagcttctt 333  Q
     || |||||||||||    
T  15951278 ttagtttagcttctt 15951264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 19139378 - 19139328
Alignment:
Q  358 tacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  19139378 tacatataaagagatcattctagtatttaactctaatgggcctcttattat 19139328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 17304833 - 17304746
Alignment:
Q  29 aacagatggtaattaaggaaaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaaagagtttctctaactactc 116  Q
    |||| ||||| |||||  ||||||||||| |||||||||| |||||||||||||||| |||| ||| | | ||||||| |||||||||    
T  17304833 aacatatggtgattaaacaaaatagggtgatttattgatacgaatgaaaatagtaaaatagtagaatagaaagtttctgtaactactc 17304746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 333
Target Start/End: Original strand, 33549103 - 33549218
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||| ||||||||  || |||||||  ||||||||| || |||||||||||| ||| |||||||||||||||||| |||      |||||| ||||     
T  33549103 aaacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtga 33549202  T
Q  318 gctaatttagcttctt 333  Q
    ||||||||||||||||    
T  33549203 gctaatttagcttctt 33549218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 217 - 330
Target Start/End: Complemental strand, 10338252 - 10338139
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    ||||| || |||||||| | | |||||||  ||||||||| |  |||||||||||| |||||||||||||||||||||||| | ||  |||| |||  ||    
T  10338252 taaactcacttgggttggcatggtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattccccccagtgtcaacttgattg 10338153  T
Q  317 ggctaatttagctt 330  Q
     |||||||||||||    
T  10338152 agctaatttagctt 10338139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 17304743 - 17304686
Alignment:
Q  161 gccctaaacagaaaactcaatccgtcatactctaaactcctaagaattcccctttata 218  Q
    |||||||| | |||||| | | ||||||||||||||||||||||||||||||||||||    
T  17304743 gccctaaaaaaaaaacttatttcgtcatactctaaactcctaagaattcccctttata 17304686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 1056761 - 1056646
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||||||||||  || ||||||||| |||| ||||| | |||||||| | | ||||||||| |||| |   ||| || ||||||    
T  1056761 aacccacttgggttgacctagtggtattggcctgggacttgggagtatgctcatcctcaaggttttaagttcgattctctctggtgccaagttaggtggg 1056662  T
Q  319 ctaatttagcttcttc 334  Q
     |||||||||||||||    
T  1056661 ttaatttagcttcttc 1056646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 226 - 333
Target Start/End: Original strand, 34444810 - 34444917
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| ||| |||||||   |||||||| | ||||||||||||| | |||||||||||||||||||| | || |    | |||| ||||||||||||    
T  34444810 ttgggttggcctggtggtattgacttgggaccttagagtgtgctcctccccaaggtctcaggttcgattctccctggagctagtttgagtgggctaattt 34444909  T
Q  326 agcttctt 333  Q
    ||||||||    
T  34444910 agcttctt 34444917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 333
Target Start/End: Original strand, 3925744 - 3925858
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    ||||||||| |||||  ||||||||||  | |||| |  |||||||||| |||||||||| ||||||| ||| |||| |||| | ||||||||| | |||    
T  3925744 aacccatttaggttgaactagtggtattggtttggaatctgagagtgtgttccttctcaaagtctcagattcaattctctctggtatcaatttgaggggg 3925843  T
Q  319 ctaatttagcttctt 333  Q
     || |||||||||||    
T  3925844 ttagtttagcttctt 3925858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 334
Target Start/End: Complemental strand, 6758497 - 6758383
Alignment:
Q  220 acccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggc 319  Q
    ||||| ||| |||| ||| |||||||  |||| ||| ||| |||||||||||  ||| |||||||| | ||||||| |||| |  ||||||| |||||||    
T  6758497 acccacttgtgttggcctggtggtattggcttaggatttgggagtgtgctccacctcgaggtctcaagatcgattctctctggtgtcaatttaggtgggc 6758398  T
Q  320 taatttagcttcttc 334  Q
     ||||||||||||||    
T  6758397 aaatttagcttcttc 6758383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 8597774 - 8597708
Alignment:
Q  268 ctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||| |||||||||||| |||| |||| ||| ||   |||||||||||||||||||||||||||||    
T  8597774 ctcctcctcaaggtctcaagttcaattctctccagtgccaatttgggtgggctaatttagcttcttc 8597708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 343 - 408
Target Start/End: Complemental strand, 17304700 - 17304635
Alignment:
Q  343 gaattcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    |||||||||||||||||| || || || |||||||||||||||| |  ||||| ||||||||||||    
T  17304700 gaattcccctttatatacgaaaaacgataacattctagtatttatccttaatgagcctcttattat 17304635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 20863404 - 20863477
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggcta 321  Q
    |||||||||||  |||||||||||| ||||||||||||| || ||||| |||||    ||||||||||||||||    
T  20863404 gcttgggactttggagtgtgctcctcctcaaggtctcagatttgattctctctaatgccaatttgggtgggcta 20863477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 28363979 - 28364044
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattta 326  Q
    |||||||||||| ||||||||||||| |||||||  |||| |  ||||||||| ||||||||||||    
T  28363979 gagtgtgctcctcctcaaggtctcagattcgattatctctggtgtcaatttggatgggctaattta 28364044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 333
Target Start/End: Original strand, 13330085 - 13330201
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtg 316  Q
    |||||||| |||||||| |||||||||||   ||| | ||||| ||||  |||||| ||||||||||||| |||||||| |||| |   ||||||| | |    
T  13330085 taaacccacttgggttgacctagtggtattgactttgaacttgggagtaagctcctcctcaaggtctcagattcgattctctcttgtgccaatttgagag 13330184  T
Q  317 ggctaatttagcttctt 333  Q
    || || |||||||||||    
T  13330185 ggttagtttagcttctt 13330201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 24507613 - 24507497
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    |||| ||||||||||| ||||||||| |  ||||||||| |  |||| ||||||| ||||||||||  ||||| |||| |||  | |||||||| |||||    
T  24507613 aaactcatttgggttggcctagtggtgttggcttgggaccttggagtttgctcctcctcaaggtctagggttcaattctctccggtatcaatttaggtgg 24507514  T
Q  318 gctaatttagcttcttc 334  Q
    | || |||| |||||||    
T  24507513 gttagtttaacttcttc 24507497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 294
Target Start/End: Complemental strand, 27989726 - 27989658
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||| ||| |||||||||||  |||||| ||||| |||| |||||||||| ||||| ||||||||||||    
T  27989726 ttggattggcctagtggtattagcttggaacttgggagtatgctccttcttaaggtttcaggttcgatt 27989658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 17149618 - 17149580
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  17149618 gagtgtgctcct-ctcaaggtctcaggttcgattccctct 17149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 23910157 - 23910114
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcga 292  Q
    |||||||| || |||||||||||| |||||||||||||||||||    
T  23910157 cttgggacctgggagtgtgctcctcctcaaggtctcaggttcga 23910114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 252 - 334
Target Start/End: Original strand, 2484753 - 2484835
Alignment:
Q  252 gggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||| ||| |||||| |||||||| || |||| ||||||||||| |||  |  |||||||| ||||||||||||| |||||||    
T  2484753 gggatttgggagtgtactccttcttaaagtctgaggttcgattctctccggtgtcaatttgagtgggctaatttaacttcttc 2484835  T

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Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 15497115 - 15497037
Alignment:
Q  217 taaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||||| |||||||| |||| || |||  | |||| ||||||||||||||| |||| |||| ||||| |||||||||    
T  15497115 taaacccacttgggttggcctaatgatattggtttggaacttgagagtgtgctacttcacaagatctcatgttcgattc 15497037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 27869778 - 27869717
Alignment:
Q  227 tgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggtt 289  Q
    ||||||| ||| |||||||  ||||||||||| |||||||||||| ||||||| |||||||||    
T  27869778 tgggttgacctggtggtatgggcttgggactttagagtgtgctcc-tctcaagatctcaggtt 27869717  T

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Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 330
Target Start/End: Complemental strand, 3172814 - 3172733
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagctt 330  Q
    |||||||| || |||| |||||||  || ||||||||| |||||||  || |||  | ||||||||||||||||||||||||    
T  3172814 cttgggacctgggagtatgctcctcatcgaggtctcagattcgattttctttagtgttaatttgggtgggctaatttagctt 3172733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 6519216 - 6519171
Alignment:
Q  249 cttgggacttgagagtgtgctccttctcaaggtctcaggttcgatt 294  Q
    |||||||||||| |||||||| |||| |||||||| ||||||||||    
T  6519216 cttgggacttgaaagtgtgcttcttcacaaggtcttaggttcgatt 6519171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 12216775 - 12216820
Alignment:
Q  250 ttgggacttgagagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    ||||||| || || ||||||||||||| ||||||||||||||||||    
T  12216775 ttgggacctgcgaatgtgctccttctcgaggtctcaggttcgattc 12216820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Complemental strand, 24256856 - 24256783
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||| ||||| |||||||||||||| ||||||||| |||| |  ||||||| ||| || || ||||||||||||    
T  24256856 gagtatgctcattctcaaggtctcaagttcgattctctctggtgtcaatttaggtaggttagtttagcttcttc 24256783  T

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Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 2616476 - 2616548
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcg 291  Q
    ||||||||||||||| |||||||||||  ||||| | | ||  |||||||||||  ||||||||||| |||||    
T  2616476 aacccatttgggttggcctagtggtattagcttgagtcatggaagtgtgctcctcttcaaggtctcaagttcg 2616548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 242 - 334
Target Start/End: Complemental strand, 11103488 - 11103396
Alignment:
Q  242 gtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    |||| |||||||||||||  ||||||||||| || |||||||| | |||||||| |||| |   ||||||  ||| ||||||||| |||||||    
T  11103488 gtattcgcttgggacttggtagtgtgctcctccttaaggtctccgattcgattctctctggtgccaatttaagtgagctaatttaacttcttc 11103396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 14278158 - 14278086
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggct 320  Q
    |||| |||| || ||||| |||||| || ||||||||||||| ||||| |||| |  ||||||||||||||||    
T  14278158 gctttggacctgggagtgcgctcctccttaaggtctcaggtttgattctctctggtgtcaatttgggtgggct 14278086  T

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Target: scaffold0300 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 227 - 334
Target Start/End: Original strand, 4348 - 4455
Alignment:
Q  227 tgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattta 326  Q
    |||||||||||||||||||| |||||||| ||| ||||||||||||||| ||||| | ||||||||||||||||||  ||||||||||||| ||||||||    
T  4348 tgggttgccctagtggtataggcttgggatttgggagtgtgctccttcttaaggttttaggttcgattccctctagtgtcaatttgggtggactaattta 4447  T
Q  327 gcttcttc 334  Q
    ||||||||    
T  4448 gcttcttc 4455  T

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Target: scaffold0380 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 48 - 188
Target Start/End: Original strand, 9187 - 9328
Alignment:
Q  48 aaatagggtgctttattgatatgaatgaaaatagtaaactagtggaagaa------agagtttctctaactactcccagagtaaagctccgacacaactc 141  Q
    |||||||||||||| ||||||||||||||| ||||||| |||| ||||||      |||||||||||||||||     | | ||||||| ||||||||||    
T  9187 aaatagggtgctttgttgatatgaatgaaattagtaaaatagtagaagaagaagatagagtttctctaactac-----gtgcaaagctctgacacaactc 9281  T
Q  142 agagacgaatcctactttagccctaaacagaaaactcaatccgtcat 188  Q
    ||||| |||||||||| | ||||| |||||||||||||||| |||||    
T  9282 agagaggaatcctactctggccctgaacagaaaactcaatctgtcat 9328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 224 - 334
Target Start/End: Complemental strand, 6990 - 6883
Alignment:
Q  224 atttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaat 323  Q
    |||||||||| |||||||||||  |||||||||| | |||||||||||| ||||| ||||||||||||||   |||| |  |||||||| ||||||||||    
T  6990 atttgggttggcctagtggtattggcttgggactggggagtgtgctcctcctcaaagtctcaggttcgat---ctctggtgtcaatttgagtgggctaat 6894  T
Q  324 ttagcttcttc 334  Q
    |||||||||||    
T  6893 ttagcttcttc 6883  T

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Target: scaffold0118 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 41709 - 41594
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| |||||||| |||||||||||  ||||| ||  ||||||| ||||||| ||| ||||||||||||| |||| ||||    ||||||||||||||    
T  41709 aacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttgggtggg 41610  T
Q  319 ctaatttagcttcttc 334  Q
    |||||||||| |||||    
T  41609 ctaatttagcctcttc 41594  T

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Target: scaffold0126 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 236 - 334
Target Start/End: Complemental strand, 25406 - 25308
Alignment:
Q  236 ctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||||||  ||||| |||||| ||||||||||||||||||||||||||||||||||  |||| |  ||||||||  || |||| ||||||||||||    
T  25406 ctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgattatctctggtgtcaatttgaatgagctattttagcttcttc 25308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 43402 - 43301
Alignment:
Q  225 tttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatt 324  Q
    ||||||||| | | |||||||  |||||||||||| ||||||| ||||||| ||||||||| ||||||||||||  ||  ||||||||| ||||||||||    
T  43402 tttgggttggcatggtggtattggcttgggacttgggagtgtgttccttcttaaggtctcatgttcgattcccttcagtgtcaatttggatgggctaatt 43303  T
Q  325 ta 326  Q
    ||    
T  43302 ta 43301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 219 - 334
Target Start/End: Complemental strand, 15399 - 15284
Alignment:
Q  219 aacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtggg 318  Q
    |||||| ||||||||  || |||||||  ||||||||| || |||||||||||| ||| |||||||||||||||||| |||      |||||| ||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtggg 15300  T
Q  319 ctaatttagcttcttc 334  Q
    ||||||||||||||||    
T  15299 ctaatttagcttcttc 15284  T

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Target: scaffold0025 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 26484 - 26408
Alignment:
Q  101 gtttctctaactactcccagagtaaagctc--cgacacaactcagagacgaatcctactttagccctaaacagaaaac 176  Q
    ||||||| |||||| ||||||| |||||||  |||||||||||||||| |||||||||| ||| ||||||||||||||    
T  26484 gtttctccaactacacccagaggaaagctctccgacacaactcagagaggaatcctactctag-cctaaacagaaaac 26408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 145947 - 145878
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttc 331  Q
    |||||||||||||||| ||||||||| |||||||||| | |||| |||||| |||| ||||||||||||||    
T  145947 gagtgtgctccttctcgaggtctcagattcgattccc-ccagcaccaatttaggtgagctaatttagcttc 145878  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 95040 - 94976
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttc 290  Q
    |||||||| |||||||||||  |||||| || || |||||||||||| |||||||||||||||||    
T  95040 ttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttc 94976  T

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Target: scaffold0180 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 20027 - 19957
Alignment:
Q  230 gttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    |||| |||||||||||  |||||| || || |||| ||||||| |||||||||||||||||||||| ||||    
T  20027 gttggcctagtggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctct 19957  T

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Target: scaffold0238 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 228 - 333
Target Start/End: Complemental strand, 2778 - 2673
Alignment:
Q  228 gggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttag 327  Q
    |||||| ||||| |||||| ||||| || ||  |||| ||||||| |||||||||||||||||||||| |||| |   |||||||    |||||||||||    
T  2778 gggttggcctagcggtatatgcttgagaattaggagtctgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaagaggctaatttag 2679  T
Q  328 cttctt 333  Q
    ||||||    
T  2678 cttctt 2673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 139865 - 139974
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    ||||||||||||||||  |||||||| |  | ||||||| || || ||||||| ||||||| |||| |||||  |||| ||||||  ||||||| | |||    
T  139865 aaacccatttgggttgatctagtggtgttggattgggacctgggaatgtgctctttctcaaagtcttaggtttaattctctctagtgtcaatttagatgg 139964  T
Q  318 gctaatttag 327  Q
    ||||||||||    
T  139965 gctaatttag 139974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 330
Target Start/End: Complemental strand, 909 - 805
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    ||||| || ||| |||||||  ||||||||  || || ||||||||| ||| | |||||||||||||||| |||||| || |||||||||||   |||||    
T  909 ttggggtggcctggtggtattggcttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctctagtattaatttgggtggataaattt 810  T
Q  326 agctt 330  Q
    |||||    
T  809 agctt 805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 1752 - 1868
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    |||| ||||||||||| ||||||||| |  ||||||||| |  |||| ||||||| ||||||||||  ||||| |||| |||  | |||||||| |||||    
T  1752 aaactcatttgggttggcctagtggtgttggcttgggaccttggagtttgctcctcctcaaggtctagggttcaattctctccggtatcaatttaggtgg 1851  T
Q  318 gctaatttagcttcttc 334  Q
    | || |||| |||||||    
T  1852 gttagtttaacttcttc 1868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 334
Target Start/End: Original strand, 12188 - 12304
Alignment:
Q  218 aaacccatttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgg 317  Q
    |||| ||||||||||| ||||||||| |  ||||||||| |  |||| ||||||| |||||||||| | |||  |||| |||| | |||||||| |||||    
T  12188 aaactcatttgggttggcctagtggtgttggcttgggaccttggagtttgctcctcctcaaggtctaaagttaaattctctctggtatcaatttaggtgg 12287  T
Q  318 gctaatttagcttcttc 334  Q
      || ||||||||||||    
T  12288 attagtttagcttcttc 12304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 13080 - 13021
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggct 320  Q
    |||||||||||| |||||||||||||||||||||| |||     ||||||||||||||||    
T  13080 gagtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaatttgggtgggct 13021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 300
Target Start/End: Original strand, 11535 - 11609
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctct 300  Q
    ||||| || ||| |||||||  ||||||||  || |||||||||||| ||| |||||||||||||||||| ||||    
T  11535 ttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctct 11609  T

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Target: scaffold0291 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 295
Target Start/End: Complemental strand, 2504 - 2470
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattc 295  Q
    |||||||||||| ||||||||||||||||||||||    
T  2504 gagtgtgctcctcctcaaggtctcaggttcgattc 2470  T

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Target: scaffold0072 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 334
Target Start/End: Original strand, 16593 - 16665
Alignment:
Q  261 gagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttcttc 334  Q
    ||||||| | ||||||||||||||| ||| ||||| | |||  ||||||||| ||||||||||||| |||||||    
T  16593 gagtgtgtttcttctcaaggtctcatgtttgattctccctat-atcaatttgagtgggctaatttaacttcttc 16665  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 408
Target Start/End: Original strand, 182679 - 182739
Alignment:
Q  347 tcccctttatatacaaataaagagaacattctagtatttaactctaatgggcctcttattat 408  Q
    ||||||||||||||||||| ||||||| ||||||||| | || |||||  ||||||||||||    
T  182679 tcccctttatatacaaatatagagaactttctagtatattac-ctaataagcctcttattat 182739  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 49335 - 49420
Alignment:
Q  248 gcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaatttagcttctt 333  Q
    |||||||| ||||||||||||||||  || |||| ||||||||||||| |||  |  |||||||  ||||| ||||||| ||||||    
T  49335 gcttgggatttgagagtgtgctcctcttcgaggtatcaggttcgattctctccggtgtcaatttaagtgggttaatttaacttctt 49420  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 226 - 330
Target Start/End: Original strand, 106055 - 106159
Alignment:
Q  226 ttgggttgccctagtggtatacgcttgggacttgagagtgtgctccttctcaaggtctcaggttcgattccctctagcatcaatttgggtgggctaattt 325  Q
    |||||||| | | |||||||  |||||||||  | ||||||||| |||||| | |||| | ||||||||| ||||    |||||||||||||| ||||||    
T  106055 ttgggttggcgtggtggtattagcttgggaccagggagtgtgctgcttctcgaagtctaaagttcgattctctcttatgtcaatttgggtgggttaattt 106154  T
Q  326 agctt 330  Q
    |||||    
T  106155 agctt 106159  T

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