View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6625_high_31 (Length: 340)
Name: NF6625_high_31
Description: NF6625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6625_high_31 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 33504819 - 33505135
Alignment:
| Q |
1 |
ggtaggtctctcccaagcaagcataatatcataggataacctactaaatgaaccattattgatctcttcctctatgttacggcacatttgagttagagcc |
100 |
Q |
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| T |
33504819 |
ggtaggtctctcccaagcaagcataatatcataggataacctactaaatgaaccattattgatctcttcctctatgttacggcacatttgagttagagcc |
33504918 |
T |
|
| Q |
101 |
ttcccactaccaaattcaactaaatttttgcaatagtttcctgcatctggagtccatccttgttcaaaatcttccaccaatttctctaccgagattttca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
33504919 |
ttcccactaccaaattcaactaaatttttgcaatagtttcctgcatctggagtccatccttgttcaaaatcttccaccaatttctctaccgagatttcca |
33505018 |
T |
|
| Q |
201 |
gtttcctaataatttagtaaccaaaatattaattaatatttgcatatatagttaacatgcatagtaataagaaaaatatacaatctataaagcatagact |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33505019 |
gtttcctaataatttagtaaccaaaatattaattaatatttgcatatatagttaacatgcatagtaataagaaaaatatacaatctataaagcatagact |
33505118 |
T |
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| Q |
301 |
caaacacggacaccaga |
317 |
Q |
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||||||||||||||||| |
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| T |
33505119 |
caaacacggacaccaga |
33505135 |
T |
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