View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6625_high_36 (Length: 310)
Name: NF6625_high_36
Description: NF6625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6625_high_36 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 19 - 293
Target Start/End: Original strand, 1505299 - 1505579
Alignment:
| Q |
19 |
acaaccaagtcagtgaatgatcatgcgtgaaaggttttaggatttaaaaaatgtgtactgaaacctatacatcatgagttaacatttatagaaagagaat |
118 |
Q |
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| T |
1505299 |
acaaccaagtcagtgaatgatcatgagtgaaaggttttaggatttaaaaaatgtgtactgaaacctatacatcataagttaacatttatagaaagagaat |
1505398 |
T |
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| Q |
119 |
tgagatgtttttt--aatataattcctaatta----attgtcctttgagacaactatggacaaatcctggagtgatgatgatcacatgatcctgattata |
212 |
Q |
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| T |
1505399 |
tgagatgttttttttaatataattcctaattagacaattgtcctttgaaacaactatggacaaatcctggagtgatgatgatcacatgatcctgattgta |
1505498 |
T |
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| Q |
213 |
tcttcgaatttacttgagtgtgcccccaggacatatccatattggaaaattgttcttctcccaacaaaaatcgtttactcc |
293 |
Q |
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| T |
1505499 |
tcttcgaatttacttgagtgtgcctccatgacatatccatatcggaaaattgctcttctcccaacaaaaaacgtttactcc |
1505579 |
T |
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