View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6625_high_39 (Length: 295)

Name: NF6625_high_39
Description: NF6625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6625_high_39
NF6625_high_39
[»] chr5 (8 HSPs)
chr5 (23-134)||(30660689-30660800)
chr5 (132-275)||(20236754-20236897)
chr5 (138-277)||(25760747-25760886)
chr5 (139-277)||(23352567-23352705)
chr5 (138-215)||(38679811-38679888)
chr5 (223-277)||(13851307-13851361)
chr5 (138-215)||(8301121-8301198)
chr5 (138-189)||(13851359-13851410)
[»] chr3 (3 HSPs)
chr3 (139-277)||(48094500-48094638)
chr3 (139-271)||(52973042-52973174)
chr3 (138-215)||(26502550-26502627)
[»] chr2 (4 HSPs)
chr2 (138-277)||(38618747-38618886)
chr2 (139-275)||(17313116-17313252)
chr2 (138-214)||(30491030-30491106)
chr2 (133-221)||(9634935-9635023)
[»] chr7 (3 HSPs)
chr7 (138-277)||(41257952-41258091)
chr7 (139-277)||(19215066-19215204)
chr7 (139-215)||(33950633-33950709)
[»] chr1 (5 HSPs)
chr1 (142-273)||(44713682-44713813)
chr1 (142-277)||(45910997-45911132)
chr1 (138-215)||(33801064-33801141)
chr1 (138-277)||(50514848-50514978)
chr1 (144-215)||(41723237-41723308)
[»] chr8 (2 HSPs)
chr8 (139-272)||(9174319-9174452)
chr8 (142-277)||(9710842-9710977)
[»] chr4 (2 HSPs)
chr4 (138-217)||(38218624-38218703)
chr4 (138-215)||(56464000-56464077)
[»] chr6 (1 HSPs)
chr6 (138-277)||(18460362-18460501)


Alignment Details
Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 30660689 - 30660800
Alignment:
Q  23 gagttctcctctacatctctagaggatgttcaaagtgtgagatcgataggatcttgaatctcaagagcattggagacctaaagtactctttgatataagc 122  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30660689 gagtcctcctttacatctctagaggatgttcaaagtgtgagatcgataggatcttgaatctcaagagcattggagacctaaagtactctttgatataagc 30660788  T
Q  123 caatatttgatg 134  Q
    ||||||||||||    
T  30660789 caatatttgatg 30660800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 132 - 275
Target Start/End: Complemental strand, 20236897 - 20236754
Alignment:
Q  132 atgacaattactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggtt 231  Q
    ||||| ||||||||| |||||||||| ||||||| |||| ||| |||||||||||||||| |||||||||| |||||||||||||||||||||||| | |    
T  20236897 atgactattacttttcccaccctacaaccttctcgcgtgccctgtgattttgaccaaaattccctttgttcagattgtataatctggacaaaaatctgat 20236798  T
Q  232 cctataaaccgaaatggttagcaaatcaccctgattcatgtggc 275  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||    
T  20236797 cctataatctgaaatggttagcaaatcacactgattcatgtggc 20236754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 138 - 277
Target Start/End: Original strand, 25760747 - 25760886
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctata 237  Q
    ||||||||||||||| |||| ||||||| || | ||| ||||||||||||||||||||| ||| || ||||||||||||||||||||||||| |||||||    
T  25760747 attactttttccaccttacaaccttctcgcgcgccctatgattttgaccaaaataccctatgtccgaattgtataatctggacaaaaatcggatcctata 25760846  T
Q  238 aaccgaaatggttagcaaatcaccctgattcatgtggcct 277  Q
    | || ||||||||||||||| |||||||||||||||||||    
T  25760847 atccaaaatggttagcaaataaccctgattcatgtggcct 25760886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 139 - 277
Target Start/End: Complemental strand, 23352705 - 23352567
Alignment:
Q  139 ttactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctataa 238  Q
    |||||||| |||||||||||||||||| |  | ||| |||||||||| ||||||||||||||||||||  || |||| ||||| || |  | |||||| |    
T  23352705 ttacttttcccaccctacagccttctcgcacgccctgtgattttgactaaaataccctttgttcggataatacaatccggacagaatttagatcctatca 23352606  T
Q  239 accgaaatggttagcaaatcaccctgattcatgtggcct 277  Q
     |||||||| | | |||||||||||||||||| ||||||    
T  23352605 tccgaaatgatcatcaaatcaccctgattcatctggcct 23352567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 38679888 - 38679811
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatc 215  Q
    |||||||||||||||||||||| ||||| || | ||| ||||||||||||||||||||||||| | ||||||||||||    
T  38679888 attactttttccaccctacagctttctcgcgcgccctatgattttgaccaaaataccctttgtcccgattgtataatc 38679811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 13851361 - 13851307
Alignment:
Q  223 aaatcggttcctataaaccgaaatggttagcaaatcaccctgattcatgtggcct 277  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  13851361 aaatcggatcctataatccgaaatggttagcaaatcactctgattcatgtggcct 13851307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 8301198 - 8301121
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatc 215  Q
    ||||||||| |||||||||||||||||  |  | ||| ||||||||||||||||||||||||| |||||| |||||||    
T  8301198 attacttttcccaccctacagccttcttgcacgccctgtgattttgaccaaaataccctttgtccggattatataatc 8301121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 13851410 - 13851359
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaa 189  Q
    |||||||||||||||||| ||||||||| |||| | | ||||||||||||||    
T  13851410 attactttttccaccctatagccttctcgcgtgccttgtgattttgaccaaa 13851359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 4e-44; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 139 - 277
Target Start/End: Original strand, 48094500 - 48094638
Alignment:
Q  139 ttactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctataa 238  Q
    ||||||||||||||||||| |||||||  | | ||| |||||||||||||||||| |||||| |||||||||||||| ||||||||| ||| ||||||||    
T  48094500 ttactttttccaccctacaaccttctcgagcgccctatgattttgaccaaaatactctttgtccggattgtataatccggacaaaaaacggatcctataa 48094599  T
Q  239 accgaaatggttagcaaatcaccctgattcatgtggcct 277  Q
     ||||||||||||||||||||||||||||||||||||||    
T  48094600 tccgaaatggttagcaaatcaccctgattcatgtggcct 48094638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 52973174 - 52973042
Alignment:
Q  139 ttactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctataa 238  Q
    |||||||||||||||||  |||||||| || | ||| |||||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||||    
T  52973174 ttactttttccaccctatcgccttctcgcgcgccctgtgattttgaccaaaatacccttcggtcggattgtataatccggacaaaaatcggatcctataa 52973075  T
Q  239 accgaaatggttagcaaatcaccctgattcatg 271  Q
     ||||||||||||| |||||||| |||||||||    
T  52973074 tccgaaatggttagaaaatcaccttgattcatg 52973042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 26502627 - 26502550
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatc 215  Q
    ||||||||| ||||||||||||||||||||| | ||| ||||||||||||||||||||||||| | ||||||||||||    
T  26502627 attacttttcccaccctacagccttctcacgcgccctatgattttgaccaaaataccctttgtccagattgtataatc 26502550  T

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Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 138 - 277
Target Start/End: Original strand, 38618747 - 38618886
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctata 237  Q
    ||||||||| |||||||||||||||||| || | ||| ||||||||||||||||||||||||| | |||||||||||| | | ||||||||| ||| |||    
T  38618747 attacttttcccaccctacagccttctcgcgcgccctgtgattttgaccaaaataccctttgtccagattgtataatccgaataaaaatcggatccaata 38618846  T
Q  238 aaccgaaatggttagcaaatcaccctgattcatgtggcct 277  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  38618847 atccgaaatggttagcaaatcaccctgattcatgtggcct 38618886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 275
Target Start/End: Complemental strand, 17313252 - 17313116
Alignment:
Q  139 ttactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctataa 238  Q
    |||||||| ||||||||  |||||||| || | ||| |||||||||| ||||||||||||||  ||||||||||||| | ||| || |||| ||||||||    
T  17313252 ttacttttcccaccctatcgccttctcgcgcgccctgtgattttgactaaaataccctttgtctggattgtataatccgaacagaattcggatcctataa 17313153  T
Q  239 accgaaatggttagcaaatcaccctgattcatgtggc 275  Q
     | |||||| ||| ||||||||| |||||||| ||||    
T  17313152 tctgaaatgattatcaaatcaccttgattcatctggc 17313116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 30491106 - 30491030
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataat 214  Q
    ||||||||| |||||||||||||||||| || | | | ||||||||||||||||||||||||| |||||||||||||    
T  30491106 attacttttcccaccctacagccttctcgcgcgccttgtgattttgaccaaaataccctttgtccggattgtataat 30491030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 221
Target Start/End: Original strand, 9634935 - 9635023
Alignment:
Q  133 tgacaattactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggaca 221  Q
    |||| ||||||||||||||||  | |||||||| |||| |||| | |||| || |||||||  |||||||||||| ||||||| |||||    
T  9634935 tgactattactttttccaccccgctgccttctcgcgtgccctccgtttttaactaaaatactatttgttcggattatataatccggaca 9635023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 6e-40; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 138 - 277
Target Start/End: Complemental strand, 41258091 - 41257952
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctata 237  Q
    ||||||||| |||||||||||||||||| || | ||| |||||||||||||||||||||||||  ||||| ||||||  ||||||||||||| |||||||    
T  41258091 attacttttcccaccctacagccttctcgcgcgccctgtgattttgaccaaaataccctttgtctggattatataattcggacaaaaatcggatcctata 41257992  T
Q  238 aaccgaaatggttagcaaatcaccctgattcatgtggcct 277  Q
    | |||||||||||||||||||||  |||||||||||||||    
T  41257991 atccgaaatggttagcaaatcacattgattcatgtggcct 41257952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 277
Target Start/End: Original strand, 19215066 - 19215204
Alignment:
Q  139 ttactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctataa 238  Q
    |||||||| ||| ||||||||||||||||| | ||| ||||||||||||||||||||||| |  ||||  || |||| ||||| || |||| ||||||||    
T  19215066 ttacttttcccatcctacagccttctcacgcgccctgtgattttgaccaaaataccctttatctggataatacaatccggacagaattcggatcctataa 19215165  T
Q  239 accgaaatggttagcaaatcaccctgattcatgtggcct 277  Q
     |||||| | | | |||||||||||||||||| ||||||    
T  19215166 tccgaaacgatcatcaaatcaccctgattcatctggcct 19215204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 33950633 - 33950709
Alignment:
Q  139 ttactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatc 215  Q
    |||||||| |||| ||||||||||||| || | ||| ||||||||||||||||||| ||||| ||||||||||||||    
T  33950633 ttacttttcccactctacagccttctcgcgcgccctgtgattttgaccaaaataccttttgtccggattgtataatc 33950709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 142 - 273
Target Start/End: Complemental strand, 44713813 - 44713682
Alignment:
Q  142 ctttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctataaacc 241  Q
    ||||| |||||||||||||||||| || ||||| | ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||    
T  44713813 cttttcccaccctacagccttctcgcgcgtcctgtaattttgaccaaaataccctttgtccggattgtataatccggacaaaaatcggatcctataatcc 44713714  T
Q  242 gaaatggttagcaaatcaccctgattcatgtg 273  Q
     |||||| |||||||| |||||||||||||||    
T  44713713 aaaatggctagcaaattaccctgattcatgtg 44713682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 142 - 277
Target Start/End: Complemental strand, 45911132 - 45910997
Alignment:
Q  142 ctttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctataaacc 241  Q
    ||||| |||||||||||||||||| || | | | ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||    
T  45911132 cttttcccaccctacagccttctcgcgcgccatgtgattttgaccaaaataccctttgtccggattgtataatccggacaaaaatcggatcctataatcc 45911033  T
Q  242 gaaatggttagcaaatcaccctgattcatgtggcct 277  Q
    |||||||||||||||||| | ||||||||| |||||    
T  45911032 gaaatggttagcaaatcatcttgattcatgcggcct 45910997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 33801064 - 33801141
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatc 215  Q
    ||||||||| ||||||||| |||||||| || ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  33801064 attacttttcccaccctactgccttctcgcgcgtcctgtgattttgaccaaaataccctttgtccggattgtataatc 33801141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 138 - 277
Target Start/End: Original strand, 50514848 - 50514978
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctata 237  Q
    ||||||||| |||||||||||||||||| |  | ||| ||||||||||||||||||| |||||         ||| || ||||| ||||||| |||||||    
T  50514848 attacttttcccaccctacagccttctcgcccgccctgtgattttgaccaaaataccttttgt---------atattccggacagaaatcggatcctata 50514938  T
Q  238 aaccgaaatggttagcaaatcaccctgattcatgtggcct 277  Q
    | ||||||||||||||||||||| || |||||||||||||    
T  50514939 atccgaaatggttagcaaatcactctaattcatgtggcct 50514978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 41723237 - 41723308
Alignment:
Q  144 ttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatc 215  Q
    |||||||||||||||||||||| || | | | |||||||||||||||||||| |||| ||||||||||||||    
T  41723237 ttttccaccctacagccttctcgcgcgccttatgattttgaccaaaataccccttgtccggattgtataatc 41723308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 9174452 - 9174319
Alignment:
Q  139 ttactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctataa 238  Q
    ||||||||||||||||||||||||||| | || | | | ||||| |||||||||||||||||||  ||||||||||  ||||||||||||| ||||||||    
T  9174452 ttactttttccaccctacagccttctcgcatgccttgtaattttaaccaaaataccctttgttcatattgtataattcggacaaaaatcggatcctataa 9174353  T
Q  239 accgaaatggttagcaaatcaccctgattcatgt 272  Q
     |||||||||||||||||||||||||||||||||    
T  9174352 tccgaaatggttagcaaatcaccctgattcatgt 9174319  T

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Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 142 - 277
Target Start/End: Complemental strand, 9710977 - 9710842
Alignment:
Q  142 ctttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctataaacc 241  Q
    ||||| |||||||||||||||||| ||||  || | ||||||||||||||||||||||| |||||||||||||| |||||| | |||| |||| ||| ||    
T  9710977 cttttcccaccctacagccttctcgcgtgctctataattttgaccaaaataccctttgtccggattgtataatccggacaacattcggatcctttaatcc 9710878  T
Q  242 gaaatggttagcaaatcaccctgattcatgtggcct 277  Q
    |||||||||||||||||||||| |||||||||||||    
T  9710877 gaaatggttagcaaatcaccctaattcatgtggcct 9710842  T

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Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 38218703 - 38218624
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctg 217  Q
    ||||||||| |||||||||||||||||| || | ||| ||||||||||||||||||||||||||||||||||||||||||    
T  38218703 attacttttcccaccctacagccttctcgcgcgccctatgattttgaccaaaataccctttgttcggattgtataatctg 38218624  T

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Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 56464077 - 56464000
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatc 215  Q
    |||| |||| ||||||||||||||||||  | | ||| ||||||||||||||||||||||||| ||||||||||||||    
T  56464077 attatttttcccaccctacagccttctcgtgcgccctgtgattttgaccaaaataccctttgtccggattgtataatc 56464000  T

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Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 277
Target Start/End: Complemental strand, 18460501 - 18460362
Alignment:
Q  138 attactttttccaccctacagccttctcacgtgtcctctgattttgaccaaaataccctttgttcggattgtataatctggacaaaaatcggttcctata 237  Q
    ||||||||| |||||||   |||||||| || ||||| || |||||||||||||||||||||| ||||||  |||||| ||| |  | |||| |||||||    
T  18460501 attacttttcccaccctgttgccttctcgcgcgtcctgtgtttttgaccaaaataccctttgtccggattacataatccggatagcattcggatcctata 18460402  T
Q  238 aaccgaaatggttagcaaatcaccctgattcatgtggcct 277  Q
    | | |||||| | | |||||||||||||||||| ||||||    
T  18460401 atctgaaatgatcaacaaatcaccctgattcatatggcct 18460362  T

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