View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6625_low_55 (Length: 223)
Name: NF6625_low_55
Description: NF6625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6625_low_55 |
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Alignment Details
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 205
Target Start/End: Original strand, 34811843 - 34812030
Alignment:
| Q |
19 |
tgaagttatccatatacacttaaaaattgatcaaaatttcttgtaattaaaatcagcagactagtttcctataaaaataaaaatgattggcaggagtata |
118 |
Q |
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| T |
34811843 |
tgaagttatccatatacacttaaaaattgatcaaaatttcttgtaattaaaatcagcagactagtttcctataaaaataaaaatgattggcaggagtata |
34811942 |
T |
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| Q |
119 |
ttttaaa-atttaannnnnnnnngaaatggcagaggtagtatcaccactacatgtatctagagatactaaacaagtgtgcaaaatact |
205 |
Q |
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| T |
34811943 |
ttttaaattttttttttttttttgaaatggcagaggtagtatcaccactacatgtatctagagatactaaacaagtttgcaaaatact |
34812030 |
T |
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