View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6630_low_12 (Length: 260)
Name: NF6630_low_12
Description: NF6630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6630_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 65 - 248
Target Start/End: Complemental strand, 6268915 - 6268733
Alignment:
| Q |
65 |
ttgttttcatagttagtcaatcataattattctaacattnnnnnnnttaatttcatcatatctaacttgaaagtaatacaaatatatgttatgattgatc |
164 |
Q |
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| T |
6268915 |
ttgttttcatagttaatcaatcataattattc-aacattaaaaaaattagtttcatcatatctaacttgaaagtaatacatataaatgttatgattgatc |
6268817 |
T |
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| Q |
165 |
gacattgtaaacctttttacaaatgcaatgcatcaaaattgttccctcgttataataagagttaattaatggatatagtatttt |
248 |
Q |
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| T |
6268816 |
gacattgtaaacctttttacaaaggcaatgcatcaaaattgttccctcgttataataagagttaattaatggatatagtatttt |
6268733 |
T |
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