View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6630_low_14 (Length: 251)

Name: NF6630_low_14
Description: NF6630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6630_low_14
NF6630_low_14
[»] chr5 (47 HSPs)
chr5 (92-251)||(19827099-19827259)
chr5 (92-244)||(19523980-19524132)
chr5 (92-251)||(12936061-12936221)
chr5 (92-202)||(18677973-18678083)
chr5 (92-251)||(5384305-5384465)
chr5 (92-251)||(12950219-12950379)
chr5 (108-244)||(326357-326495)
chr5 (93-235)||(5975754-5975896)
chr5 (92-218)||(19525281-19525407)
chr5 (88-251)||(1273082-1273246)
chr5 (93-235)||(224566-224708)
chr5 (92-181)||(5382939-5383028)
chr5 (106-235)||(18695623-18695752)
chr5 (107-235)||(15857594-15857722)
chr5 (92-235)||(32735455-32735598)
chr5 (92-202)||(12933748-12933858)
chr5 (113-218)||(40058036-40058141)
chr5 (90-178)||(27894056-27894144)
chr5 (93-202)||(10085854-10085963)
chr5 (92-201)||(40059338-40059447)
chr5 (92-168)||(1273383-1273459)
chr5 (86-201)||(42510105-42510220)
chr5 (92-202)||(1663184-1663294)
chr5 (92-178)||(8762433-8762519)
chr5 (106-235)||(21389119-21389246)
chr5 (92-181)||(12947909-12947998)
chr5 (113-202)||(15613523-15613612)
chr5 (93-202)||(22812396-22812505)
chr5 (113-202)||(22819558-22819647)
chr5 (106-218)||(21387648-21387760)
chr5 (107-202)||(12830947-12831042)
chr5 (92-143)||(19825871-19825922)
chr5 (92-178)||(26403304-26403390)
chr5 (113-202)||(12862927-12863016)
chr5 (93-138)||(33362640-33362685)
chr5 (93-192)||(223223-223323)
chr5 (93-193)||(3077002-3077102)
chr5 (113-201)||(38471307-38471395)
chr5 (106-233)||(8188178-8188305)
chr5 (106-172)||(5061039-5061105)
chr5 (106-172)||(15510302-15510368)
chr5 (92-154)||(41905172-41905234)
chr5 (92-153)||(328212-328273)
chr5 (92-137)||(30916192-30916237)
chr5 (113-202)||(42980718-42980807)
chr5 (92-156)||(6629728-6629792)
chr5 (118-202)||(42979471-42979555)
[»] chr8 (54 HSPs)
chr8 (92-235)||(29739619-29739762)
chr8 (92-251)||(36939992-36940152)
chr8 (106-235)||(19914882-19915011)
chr8 (92-181)||(31623903-31623992)
chr8 (92-244)||(37474002-37474155)
chr8 (106-202)||(24069455-24069551)
chr8 (106-229)||(24068341-24068464)
chr8 (92-202)||(31625393-31625502)
chr8 (92-218)||(36756061-36756187)
chr8 (92-202)||(38591016-38591126)
chr8 (113-202)||(27750630-27750719)
chr8 (85-202)||(36070168-36070285)
chr8 (92-236)||(34616126-34616275)
chr8 (92-211)||(36071378-36071497)
chr8 (92-207)||(43277925-43278040)
chr8 (116-191)||(44606160-44606235)
chr8 (92-202)||(16363821-16363931)
chr8 (92-178)||(41866891-41866977)
chr8 (113-202)||(7486095-7486184)
chr8 (92-181)||(37276273-37276362)
chr8 (93-181)||(4807364-4807452)
chr8 (87-183)||(43386730-43386826)
chr8 (92-183)||(117045-117136)
chr8 (92-218)||(35943904-35944031)
chr8 (106-181)||(45385824-45385899)
chr8 (92-202)||(13367059-13367169)
chr8 (92-218)||(29738288-29738414)
chr8 (92-178)||(41867949-41868035)
chr8 (93-202)||(19913490-19913599)
chr8 (92-181)||(38589818-38589906)
chr8 (113-218)||(39546670-39546775)
chr8 (92-181)||(43275747-43275836)
chr8 (113-233)||(37274905-37275025)
chr8 (92-235)||(37982-38124)
chr8 (92-202)||(35945446-35945556)
chr8 (92-182)||(37323345-37323435)
chr8 (92-202)||(37472400-37472510)
chr8 (106-204)||(39515210-39515308)
chr8 (107-192)||(22619907-22619992)
chr8 (107-232)||(22621113-22621238)
chr8 (92-172)||(10052101-10052181)
chr8 (87-154)||(7487444-7487511)
chr8 (106-181)||(14820204-14820279)
chr8 (106-170)||(1570247-1570311)
chr8 (113-181)||(7770927-7770995)
chr8 (87-183)||(7796835-7796931)
chr8 (92-172)||(10053783-10053863)
chr8 (87-149)||(8395016-8395078)
chr8 (114-172)||(24853363-24853421)
chr8 (114-171)||(33510424-33510481)
chr8 (113-182)||(37324717-37324786)
chr8 (92-176)||(3271895-3271979)
chr8 (92-176)||(30864490-30864574)
chr8 (92-172)||(41178477-41178557)
[»] chr2 (42 HSPs)
chr2 (92-235)||(37867753-37867896)
chr2 (92-235)||(12958414-12958556)
chr2 (93-235)||(10368361-10368503)
chr2 (113-236)||(11386642-11386765)
chr2 (92-218)||(7036963-7037089)
chr2 (95-181)||(2581803-2581889)
chr2 (89-236)||(21012055-21012198)
chr2 (90-202)||(28109878-28109990)
chr2 (106-225)||(6706937-6707056)
chr2 (92-251)||(7038299-7038451)
chr2 (92-202)||(23177670-23177781)
chr2 (92-202)||(23588927-23589038)
chr2 (106-202)||(42246602-42246698)
chr2 (92-218)||(37869033-37869159)
chr2 (106-183)||(12854132-12854209)
chr2 (100-233)||(23178860-23178993)
chr2 (100-233)||(23590117-23590250)
chr2 (158-251)||(40174724-40174817)
chr2 (91-202)||(35799508-35799619)
chr2 (106-204)||(12852897-12852995)
chr2 (92-174)||(41795989-41796071)
chr2 (89-156)||(4701542-4701609)
chr2 (92-199)||(12959717-12959824)
chr2 (106-153)||(42249846-42249893)
chr2 (92-166)||(11575500-11575574)
chr2 (92-181)||(2583576-2583665)
chr2 (92-181)||(3532191-3532280)
chr2 (86-183)||(14509200-14509297)
chr2 (106-211)||(29424612-29424717)
chr2 (106-183)||(35801073-35801150)
chr2 (92-192)||(42027190-42027290)
chr2 (113-172)||(2305558-2305617)
chr2 (92-183)||(42028986-42029077)
chr2 (106-172)||(3666307-3666373)
chr2 (106-172)||(5564070-5564136)
chr2 (106-172)||(5565184-5565250)
chr2 (92-218)||(10367236-10367362)
chr2 (92-218)||(32614382-32614508)
chr2 (113-202)||(7490204-7490293)
chr2 (113-181)||(1625006-1625073)
chr2 (86-178)||(20921472-20921564)
chr2 (92-176)||(42368343-42368426)
[»] chr7 (59 HSPs)
chr7 (92-235)||(25153655-25153798)
chr7 (111-251)||(24873556-24873697)
chr7 (92-217)||(46457067-46457192)
chr7 (93-218)||(25154929-25155054)
chr7 (92-236)||(4858319-4858463)
chr7 (92-236)||(40926494-40926638)
chr7 (88-183)||(18802417-18802512)
chr7 (92-218)||(46458706-46458832)
chr7 (92-202)||(19278350-19278460)
chr7 (92-202)||(46674943-46675053)
chr7 (93-181)||(22746350-22746438)
chr7 (88-178)||(19279645-19279735)
chr7 (92-202)||(22744743-22744853)
chr7 (92-236)||(14107829-14107973)
chr7 (92-236)||(14417786-14417930)
chr7 (118-198)||(40930441-40930521)
chr7 (93-191)||(41516364-41516462)
chr7 (92-181)||(22061825-22061914)
chr7 (26-67)||(32143253-32143294)
chr7 (92-181)||(43006382-43006471)
chr7 (92-181)||(43007679-43007768)
chr7 (106-182)||(17288249-17288325)
chr7 (88-192)||(43935178-43935282)
chr7 (117-181)||(46673512-46673576)
chr7 (107-218)||(35315215-35315326)
chr7 (88-183)||(43930312-43930407)
chr7 (92-178)||(1970810-1970896)
chr7 (114-171)||(7146799-7146856)
chr7 (108-181)||(7148088-7148161)
chr7 (92-181)||(25532143-25532231)
chr7 (94-198)||(4857200-4857304)
chr7 (108-235)||(10257364-10257489)
chr7 (85-193)||(18801205-18801313)
chr7 (106-178)||(19848867-19848939)
chr7 (92-204)||(22060460-22060572)
chr7 (92-192)||(33458307-33458406)
chr7 (92-192)||(33459562-33459662)
chr7 (92-235)||(41514995-41515136)
chr7 (92-179)||(48672807-48672894)
chr7 (114-181)||(48754015-48754082)
chr7 (92-202)||(38406015-38406125)
chr7 (113-235)||(45721742-45721864)
chr7 (92-233)||(13446636-13446777)
chr7 (113-222)||(14206691-14206800)
chr7 (113-222)||(14215381-14215490)
chr7 (127-204)||(26406157-26406234)
chr7 (113-178)||(27897710-27897775)
chr7 (86-183)||(43936168-43936265)
chr7 (115-172)||(44553223-44553280)
chr7 (92-176)||(28325070-28325153)
chr7 (91-147)||(35128226-35128282)
chr7 (106-181)||(7347250-7347325)
chr7 (92-202)||(36702959-36703070)
chr7 (89-172)||(38408313-38408396)
chr7 (106-172)||(1885280-1885346)
chr7 (106-172)||(30222657-30222723)
chr7 (106-192)||(36702788-36702874)
chr7 (106-171)||(41618539-41618604)
chr7 (86-143)||(44114723-44114780)
[»] chr1 (50 HSPs)
chr1 (90-244)||(13929290-13929445)
chr1 (93-247)||(49139799-49139954)
chr1 (87-181)||(25785960-25786054)
chr1 (92-218)||(14071196-14071322)
chr1 (92-181)||(25787194-25787283)
chr1 (113-204)||(13641275-13641366)
chr1 (95-218)||(13930668-13930791)
chr1 (100-181)||(48467266-48467347)
chr1 (106-235)||(50679797-50679926)
chr1 (92-192)||(21276991-21277091)
chr1 (86-181)||(16218508-16218603)
chr1 (114-204)||(19464619-19464709)
chr1 (92-202)||(47136696-47136806)
chr1 (88-181)||(26056177-26056270)
chr1 (92-181)||(47410981-47411070)
chr1 (92-181)||(47411478-47411567)
chr1 (93-181)||(2973038-2973126)
chr1 (106-202)||(3979322-3979418)
chr1 (87-239)||(47560131-47560283)
chr1 (92-204)||(52181312-52181424)
chr1 (113-232)||(40110631-40110750)
chr1 (92-218)||(49141489-49141615)
chr1 (105-218)||(14764239-14764352)
chr1 (107-192)||(24517633-24517718)
chr1 (114-183)||(26054916-26054985)
chr1 (108-233)||(36511309-36511434)
chr1 (106-202)||(14390269-14390365)
chr1 (113-201)||(36509829-36509917)
chr1 (106-181)||(42248335-42248410)
chr1 (93-199)||(9633773-9633879)
chr1 (128-233)||(9592271-9592376)
chr1 (87-183)||(3978036-3978132)
chr1 (135-179)||(14171300-14171344)
chr1 (113-181)||(16217458-16217526)
chr1 (92-156)||(33793776-33793840)
chr1 (92-176)||(47511364-47511448)
chr1 (106-170)||(51424262-51424326)
chr1 (93-172)||(29264870-29264948)
chr1 (92-143)||(38451549-38451600)
chr1 (113-192)||(40109379-40109458)
chr1 (92-235)||(51725340-51725483)
chr1 (89-156)||(52741482-52741549)
chr1 (106-172)||(2238017-2238083)
chr1 (95-173)||(34653435-34653513)
chr1 (92-138)||(38451781-38451827)
chr1 (106-172)||(44340102-44340168)
chr1 (92-138)||(52439358-52439404)
chr1 (115-172)||(48494310-48494367)
chr1 (106-170)||(13568486-13568550)
chr1 (92-156)||(44977218-44977282)
[»] chr6 (15 HSPs)
chr6 (106-235)||(31740248-31740377)
chr6 (92-202)||(31738360-31738470)
chr6 (92-202)||(8412325-8412435)
chr6 (87-235)||(33807681-33807829)
chr6 (92-202)||(293649-293760)
chr6 (113-204)||(22299910-22300001)
chr6 (92-202)||(27440184-27440294)
chr6 (92-202)||(33802026-33802136)
chr6 (92-181)||(5311276-5311365)
chr6 (92-177)||(9927603-9927688)
chr6 (93-221)||(27438788-27438916)
chr6 (92-202)||(18139496-18139606)
chr6 (92-183)||(34084162-34084251)
chr6 (92-143)||(683608-683659)
chr6 (91-202)||(8411082-8411193)
[»] scaffold0013 (2 HSPs)
scaffold0013 (92-235)||(96157-96300)
scaffold0013 (92-171)||(96855-96934)
[»] chr4 (63 HSPs)
chr4 (92-236)||(27408760-27408904)
chr4 (100-251)||(28103445-28103597)
chr4 (92-222)||(44304968-44305098)
chr4 (106-251)||(52658922-52659068)
chr4 (92-251)||(21104269-21104429)
chr4 (92-202)||(33377373-33377483)
chr4 (92-181)||(37560329-37560418)
chr4 (92-235)||(46796002-46796145)
chr4 (92-236)||(11113739-11113883)
chr4 (92-176)||(15786949-15787033)
chr4 (92-251)||(31711089-31711249)
chr4 (92-183)||(33376215-33376306)
chr4 (91-202)||(55953861-55953972)
chr4 (92-202)||(27410692-27410800)
chr4 (93-181)||(1273463-1273550)
chr4 (92-200)||(11114991-11115099)
chr4 (92-236)||(15787477-15787621)
chr4 (114-202)||(35787815-35787903)
chr4 (92-218)||(47668590-47668716)
chr4 (108-233)||(34439638-34439763)
chr4 (92-177)||(37558995-37559080)
chr4 (106-202)||(15446679-15446775)
chr4 (92-192)||(48207736-48207836)
chr4 (93-200)||(26393138-26393245)
chr4 (108-235)||(50531732-50531859)
chr4 (106-172)||(19049911-19049977)
chr4 (85-171)||(39592329-39592415)
chr4 (113-202)||(3533617-3533706)
chr4 (113-202)||(26788540-26788629)
chr4 (113-218)||(52660207-52660312)
chr4 (113-202)||(56000305-56000394)
chr4 (106-182)||(30683056-30683132)
chr4 (113-181)||(53400203-53400271)
chr4 (92-235)||(6138994-6139137)
chr4 (92-183)||(30682717-30682808)
chr4 (94-185)||(40146649-40146740)
chr4 (87-202)||(44128343-44128458)
chr4 (92-202)||(86800-86910)
chr4 (92-182)||(26376326-26376416)
chr4 (113-199)||(29663661-29663746)
chr4 (92-218)||(38370279-38370405)
chr4 (92-218)||(43894102-43894228)
chr4 (92-218)||(44159082-44159208)
chr4 (87-172)||(6616250-6616335)
chr4 (113-218)||(34438424-34438529)
chr4 (121-181)||(5688667-5688727)
chr4 (106-170)||(15445447-15445511)
chr4 (117-180)||(26121894-26121955)
chr4 (92-156)||(39590938-39591002)
chr4 (87-143)||(49923864-49923920)
chr4 (93-172)||(2309842-2309921)
chr4 (92-183)||(17319039-17319130)
chr4 (92-235)||(41348236-41348379)
chr4 (94-169)||(42713462-42713537)
chr4 (113-236)||(52981125-52981248)
chr4 (106-172)||(306588-306654)
chr4 (92-182)||(10403446-10403535)
chr4 (106-172)||(46794851-46794917)
chr4 (106-176)||(56001303-56001373)
chr4 (108-181)||(38417566-38417639)
chr4 (113-218)||(38419010-38419115)
chr4 (140-204)||(5687220-5687284)
chr4 (92-172)||(29686253-29686333)
[»] chr3 (48 HSPs)
chr3 (92-251)||(32980411-32980571)
chr3 (114-244)||(19252968-19253099)
chr3 (92-204)||(51825628-51825740)
chr3 (92-251)||(8372575-8372735)
chr3 (92-236)||(17345308-17345451)
chr3 (104-183)||(51401379-51401458)
chr3 (92-202)||(8371217-8371327)
chr3 (92-202)||(49122011-49122121)
chr3 (92-189)||(17350124-17350221)
chr3 (92-181)||(41386127-41386216)
chr3 (92-177)||(41387467-41387552)
chr3 (92-181)||(42632703-42632792)
chr3 (92-181)||(42633916-42634005)
chr3 (106-235)||(48252944-48253073)
chr3 (88-192)||(47766970-47767073)
chr3 (100-183)||(43101899-43101982)
chr3 (89-192)||(47806812-47806915)
chr3 (92-183)||(54653994-54654085)
chr3 (92-178)||(10987686-10987772)
chr3 (92-202)||(26798915-26799025)
chr3 (93-202)||(19622003-19622112)
chr3 (113-218)||(21127943-21128048)
chr3 (106-202)||(29536725-29536821)
chr3 (106-218)||(51400226-51400338)
chr3 (106-225)||(11220644-11220763)
chr3 (90-204)||(12062391-12062505)
chr3 (108-249)||(35173160-35173302)
chr3 (92-202)||(36626728-36626838)
chr3 (113-235)||(43345337-43345459)
chr3 (92-181)||(53808315-53808404)
chr3 (106-202)||(47855347-47855443)
chr3 (113-172)||(39133035-39133094)
chr3 (116-219)||(49334329-49334432)
chr3 (92-171)||(54752613-54752692)
chr3 (106-204)||(11219441-11219539)
chr3 (83-233)||(25585811-25585961)
chr3 (87-133)||(49898531-49898577)
chr3 (113-170)||(40892177-40892234)
chr3 (91-204)||(51824122-51824235)
chr3 (86-235)||(53809469-53809618)
chr3 (92-211)||(25583111-25583230)
chr3 (108-183)||(47808134-47808209)
chr3 (113-211)||(35174382-35174480)
chr3 (92-202)||(43103305-43103415)
chr3 (106-219)||(7820401-7820514)
chr3 (118-178)||(10986675-10986735)
chr3 (113-181)||(13077981-13078049)
chr3 (107-183)||(23559831-23559907)
[»] scaffold1974 (1 HSPs)
scaffold1974 (87-218)||(621-752)
[»] scaffold1878 (1 HSPs)
scaffold1878 (87-218)||(522-653)
[»] scaffold0290 (2 HSPs)
scaffold0290 (87-218)||(9471-9602)
scaffold0290 (100-182)||(8384-8466)
[»] scaffold0178 (1 HSPs)
scaffold0178 (106-219)||(2257-2370)
[»] scaffold0025 (2 HSPs)
scaffold0025 (88-197)||(56714-56823)
scaffold0025 (100-236)||(54596-54732)
[»] scaffold0046 (2 HSPs)
scaffold0046 (92-235)||(24791-24934)
scaffold0046 (92-183)||(23403-23494)
[»] scaffold0003 (2 HSPs)
scaffold0003 (92-202)||(47067-47177)
scaffold0003 (93-221)||(48446-48574)
[»] scaffold0084 (2 HSPs)
scaffold0084 (106-235)||(11717-11846)
scaffold0084 (95-185)||(13230-13320)
[»] scaffold0045 (1 HSPs)
scaffold0045 (113-202)||(77190-77279)
[»] scaffold2127 (1 HSPs)
scaffold2127 (92-202)||(524-634)
[»] scaffold0051 (2 HSPs)
scaffold0051 (88-182)||(39930-40024)
scaffold0051 (90-233)||(22123-22265)
[»] scaffold0369 (1 HSPs)
scaffold0369 (92-178)||(12907-12993)
[»] scaffold0007 (1 HSPs)
scaffold0007 (90-204)||(145876-145990)
[»] scaffold0098 (1 HSPs)
scaffold0098 (107-224)||(42333-42450)
[»] scaffold0177 (1 HSPs)
scaffold0177 (106-172)||(1766-1832)
[»] scaffold0839 (1 HSPs)
scaffold0839 (92-176)||(22-106)


Alignment Details
Target: chr5 (Bit Score: 89; Significance: 5e-43; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 19827259 - 19827099
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| | |||  ||||||||||||| |||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||    
T  19827259 cttaatacatcatttagtctcttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtcccataaatcttcttccgttta 19827160  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt-atattgtttcaaccat 251  Q
    || |||||||||  || ||||||||||||||||||||| ||||| |||||||||| |||||    
T  19827159 ccattttggtcacatccgtttgttttttaatgtctaaattttttgatattgtttcgaccat 19827099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 92 - 244
Target Start/End: Original strand, 19523980 - 19524132
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||||| |||| ||| |||||||| | |||||||||| | |||||| ||||   |||||    
T  19523980 cttaatatatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggt-ctataaattttctgtcgttta 19524078  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaa-aatttttatattgttt 244  Q
    || ||||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  19524079 ccattttggtcatgtccgtttgttttttaatgtctaataattttgatattgttt 19524132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 12936221 - 12936061
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| | |||| ||||||||||||| ||||||| |||| |||| ||| |||||||| | |||||||||||| |||| |||| | |||||||    
T  12936221 cttaatacatcatttagtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgctgttta 12936122  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtcta-aaatttttatattgtttcaaccat 251  Q
    || |||||||||| || |||||||||||||||| ||  | |||||||||||||||||||||    
T  12936121 ccattttggtcatttccgtttgttttttaatgtttactattttttatattgtttcaaccat 12936061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 18677973 - 18678083
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||| ||||||| ||||||||| ||| |||||||| | ||||||||||||||||||||||||   |||||    
T  18677973 cttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtcgttta 18678072  T
Q  192 ccgttttggtc 202  Q
    |||||||||||    
T  18678073 ccgttttggtc 18678083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 5384465 - 5384305
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||| | |||| ||||||||  |||||||||||||||| ||| |||||||| | ||||||||||||||||||||||| || |||||    
T  5384465 cttaatacatcatttggttccttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttcgtccgttta 5384366  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt-atattgtttcaaccat 251  Q
    |  |||||||| | || ||| |||||||||||| ||| |||||| ||||  ||||||||||    
T  5384365 ctattttggtcctctccgttagttttttaatgtttaatatttttgatataatttcaaccat 5384305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 12950379 - 12950219
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| | |||| ||||||||||| | ||||||| |||| |||| ||| |||||||| | |||||||||||| |||| |||| |  ||||||    
T  12950379 cttaatacatcatttagtcccttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgatgttta 12950280  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtcta-aaatttttatattgtttcaaccat 251  Q
    || |||||||||| || |||||||||||||||| ||  | |||||||||||||||||||||    
T  12950279 ccattttggtcatttccgtttgttttttaatgtttactattttttatattgtttcaaccat 12950219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 326357 - 326495
Alignment:
Q  108 gtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtc 207  Q
    |||| ||||||||||||| |||||||||||||||||  || |||||||| | ||||||||||  ||||||||||||  |||||| | ||||||||  |||    
T  326357 gtcctttaacttatttttggttttcaatttgatccctcaactataaagtgtctcaatttggttgcataaatcttctgttgtttatcattttggtccggtc 326456  T
Q  208 tgtttgttt-tttaatgtctaa-aatttttatattgttt 244  Q
    ||||||||| |||||||||||| | ||||||||||||||    
T  326457 tgtttgtttctttaatgtctaatattttttatattgttt 326495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 93 - 235
Target Start/End: Original strand, 5975754 - 5975896
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| ||||| |||||| |||||||||||||| |||| | |||| |||| |||||||||||| | ||||||||||| ||||| ||||| |||||||||    
T  5975754 ttaatacatcatttggtcctttaacttattttttattttaattttggtcccctaattataaagtgtctcaatttggtctcataagtcttcctctgtttac 5975853  T
Q  193 cgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
      || ||||  | |||||| ||||||||||||||||| |||||    
T  5975854 tattgtggttctctctgttagttttttaatgtctaaagttttt 5975896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 19525407 - 19525281
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||||||| |||| ||| |||||||| | || |||||||| ||||| |||||| | |||||    
T  19525407 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgccgttta 19525308  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
    || |||||||| | || ||||||||||    
T  19525307 ccattttggtcctctccgtttgttttt 19525281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 251
Target Start/End: Original strand, 1273082 - 1273246
Alignment:
Q  88 tagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctg 187  Q
    ||||||||||| ||||| |||||| |||| |||||||| ||||||| |||| |||  ||| |||||| | | |||||||||||||||||||||||| | |    
T  1273082 tagacttaatacatcatttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtcccataaatcttctgcag 1273181  T
Q  188 tttaccgttttggtcatgtctgtttgttttttaatgtctaaaattttt-atattgtttcaaccat 251  Q
    |||||  ||||||||   || ||| |||||||||||| ||| |||||| ||||  ||||||||||    
T  1273182 tttacaattttggtcccctccgttagttttttaatgtttaatatttttgatatgatttcaaccat 1273246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 235
Target Start/End: Complemental strand, 224708 - 224566
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| |||||||||||| |||||||||||| |||||||| |||| |||| ||| |||||||| | ||||||||||| ||||| ||||| || | ||||    
T  224708 ttaatacatcatctggtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtctcataagtcttcctccgattac 224609  T
Q  193 cgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
       | | ||||| || ||| ||||||||||||||||| |||||    
T  224608 taatgtagtcatctccgttagttttttaatgtctaaatttttt 224566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 5382939 - 5383028
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||| ||||||||||||| |||||| ||||| || | |||||||||||| | ||||||||||||||||||||||    
T  5382939 cttaatacatcatttggtcccttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtcccataaatctt 5383028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 18695752 - 18695623
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| |||| |||||||| ||||||| |||  |||| ||| |||||||| | ||||||||||||||||| ||||| || ||||||   | |||||||     
T  18695752 tggtcccttaatttatttttggttttcattttattcccttaactataaagtgtctcaatttggtcccataagtcttcatccgtttactaatatggtcatc 18695653  T
Q  206 tctgtttgttttttaatgtctaaaattttt 235  Q
    || ||| |||||||||||||||||||||||    
T  18695652 tccgttagttttttaatgtctaaaattttt 18695623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 15857722 - 15857594
Alignment:
Q  107 ggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgt 206  Q
    ||||| |||||||||||| | || ||| |||| |||| ||| |||||||| |||||||||| ||||||||||||| |   ||||||| |||||||||| |    
T  15857722 ggtcccttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatct 15857623  T
Q  207 ctgtttgttttttaatgtctaaaattttt 235  Q
    | ||| |||||||||||| ||| ||||||    
T  15857622 ccgttagttttttaatgtttaatattttt 15857594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 32735598 - 32735455
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||| || | ||| ||||| |||||| | || ||||||||||||| ||||||| || | ||| ||||||||||||||| |||||| | |||||    
T  32735598 cttaatacatcctccgatcccttaacatattttattttctcaatttgatcccttaattattaaatgttttaatttggtcccataactcttctgccgttta 32735499  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
       |||||||||| |||||| || ||||||||||||| ||||||    
T  32735498 ttattttggtcatctctgttagtattttaatgtctaatattttt 32735455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 12933748 - 12933858
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| | |||| ||||||||||||| ||||||| ||||||||| ||| |||||||| | |||||||| || ||||| |||||| | |||||    
T  12933748 cttaatatatcatttagtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgttta 12933847  T
Q  192 ccgttttggtc 202  Q
    || ||| ||||    
T  12933848 ccatttcggtc 12933858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 40058036 - 40058141
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    ||||||||||||| ||||||| ||||||||| ||| ||| |||| |||||| |||||| ||||| |||||| | ||||||| |||||||||| || |||     
T  40058036 ttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttaccattttggtcatctccgtta 40058135  T
Q  213 gttttt 218  Q
    ||||||    
T  40058136 gttttt 40058141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 27894144 - 27894056
Alignment:
Q  90 gacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    ||||||||| ||| | |||||  ||||||||||||||||||||| |||| |||| ||| |||||||| ||||||||||||| |||||||    
T  27894144 gacttaatacatcgtttggtcgcttaacttattttttgttttcactttggtcccctaactataaagtgtttcaatttggtctcataaat 27894056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 10085963 - 10085854
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| ||||| |||||| |||||||||||||   ||||| |||| || | ||| | |||||| |||||||||||||||||||||||||| || |||||    
T  10085963 ttaatacatcatttggtcccttaacttatttttgaatttcactttggtctcttaactttaaagtgtttcaatttggtcccataaatcttctgctatttac 10085864  T
Q  193 cgttttggtc 202  Q
      ||||||||    
T  10085863 tattttggtc 10085854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 201
Target Start/End: Complemental strand, 40059447 - 40059338
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    |||||||||| || |||||| ||||||||||||| ||||||| ||||||||| ||| ||| |||| ||| || ||||||| |||| |||||| | |||||    
T  40059447 cttaatatataatttggtcccttaacttatttttggttttcattttgatcccctaactattaagtgttttaaattggtccaataactcttctgccgttta 40059348  T
Q  192 ccgttttggt 201  Q
     | |||||||    
T  40059347 tcattttggt 40059338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 1273459 - 1273383
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttgg 168  Q
    ||||||||||| | |||||| ||||||||||||| ||||||| |||| |||| |||||||||||| | |||||||||    
T  1273459 cttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaagtgtctcaatttgg 1273383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 42510105 - 42510220
Alignment:
Q  86 tatagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttc 185  Q
    ||||| ||||||| |||  ||| ||| |||| ||||||| | |||||| |||| |||| ||| |||||||| | |||||||||||||||||||||||| |    
T  42510105 tataggcttaatacatcccctgatcccttaatttattttattttttcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgc 42510204  T
Q  186 tgtttaccgttttggt 201  Q
     ||||||  |||||||    
T  42510205 cgtttactattttggt 42510220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 1663184 - 1663294
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| | |||| ||||||||||||| | ||||| ||||||||  ||| |||||||| | | |||||||||| ||||||||||| | |||||    
T  1663184 cttaatacatcatttagtcccttaacttatttttggatttcactttgatccattaactataaagtgtcttaatttggtcctataaatcttctgccgttta 1663283  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  1663284 ctattttggtc 1663294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 8762519 - 8762433
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    ||||||||||| | |||||| |||||||||||||  ||||||||||| |||||| | |||||| | | ||||||||||| |||||||    
T  8762519 cttaatatatcgtttggtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtcacataaat 8762433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 21389246 - 21389119
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| ||||||||||||| ||||||| |||  |||| ||| ||||  || | ||||||||||||||||| ||||| || ||||||   | ||||| |     
T  21389246 tggtcccttaacttatttttggttttcatttttttcccttaactata--gtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctc 21389149  T
Q  206 tctgtttgttttttaatgtctaaaattttt 235  Q
    || ||| |||||||||||||||||||||||    
T  21389148 tccgttagttttttaatgtctaaaattttt 21389119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 12947909 - 12947998
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||||||||| | |||| |||||||||||||  |||||| ||||||||| ||| |||||||| | |||||||| || ||||| ||||    
T  12947909 cttaatatatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttgatctcataagtctt 12947998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 15613523 - 15613612
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    ||||||||||||| | ||||| |||| ||   ||| |||||||| | |||||||||||||||||||||||||| ||||||  ||||||||    
T  15613523 ttaacttatttttggatttcattttggtcttctaactataaagtgtctcaatttggtcccataaatcttcttccgtttactattttggtc 15613612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 22812505 - 22812396
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| ||||| |||||| |||||||||||||| |||||| |||  |||| ||| |||||| | | ||| |||| ||||||||||||||| | ||||||    
T  22812505 ttaatacatcatttggtcccttaacttattttttattttcattttagtcccttaactataaaatgtctcactttgatcccataaatcttctgcagtttac 22812406  T
Q  193 cgttttggtc 202  Q
      ||||||||    
T  22812405 tattttggtc 22812396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 22819647 - 22819558
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||||||||| | || ||||||||||||| ||| ||| |||| | ||||||||||||||||| |||||| | ||||||  ||||||||    
T  22819647 ttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttctgccgtttactattttggtc 22819558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 21387648 - 21387760
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| |||||||||||||   ||||| |||| |||| ||| |||||| | | |||||||||||||||||||||||| | |||  |  |||||||| ||    
T  21387648 tggtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtcctg 21387747  T
Q  206 tctgtttgttttt 218  Q
    |||||| ||||||    
T  21387748 tctgttagttttt 21387760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 202
Target Start/End: Complemental strand, 12831042 - 12830947
Alignment:
Q  107 ggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    ||||| |||||||||||| | || ||| ||||||||| ||| ||| |||| | |||||||||||| |||| |||||| ||||||||  ||||||||    
T  12831042 ggtcccttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgctgtttactattttggtc 12830947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 19825871 - 19825922
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatccc 143  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||||||||||||    
T  19825871 cttaatacatcatttggtcccttaacttatttttggttttcaatttgatccc 19825922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 26403304 - 26403390
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    ||||||| ||||| | |||| |||||||||||||  ||||||||||| |||| ||| |||||||| | |||||||| || |||||||    
T  26403304 cttaatacatcatatagtcctttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaat 26403390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 12863016 - 12862927
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||||||||| | || ||| ||||||||| ||| ||| |||| | |||||||||||| |||| |||||| ||||||||  ||||||||    
T  12863016 ttaacttattttattttctcagtttgatcccttaactattaagtgtctcaatttggtcctataactcttctgctgtttactattttggtc 12862927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 33362685 - 33362640
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttg 138  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||    
T  33362685 ttaatatatcatttggtcccttaacttattttttgtttttaatttg 33362640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 192
Target Start/End: Original strand, 223223 - 223323
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaa-tttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    |||||||||| | | |||| ||||||||||||| |||||| | |||| |||| ||| |||||||| | | ||||||||||||||| ||||| || |||||    
T  223223 ttaatatatcgttttgtcccttaacttatttttagttttccactttggtcccctaactataaagtgtattaatttggtcccataagtcttcctccgttta 223322  T
Q  192 c 192  Q
    |    
T  223323 c 223323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 3077102 - 3077002
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    ||||||||| || |||||| |||||||||||||   ||||||||||||||| ||| | |||| | | ||||||||||||| ||| | | | |||||||||    
T  3077102 ttaatatatgatttggtcccttaacttatttttgaatttcaatttgatcccttaactttaaactgtctcaatttggtcccctaagtatacctctgtttac 3077003  T
Q  193 c 193  Q
    |    
T  3077002 c 3077002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 38471307 - 38471395
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggt 201  Q
    |||||||||||||   ||||| |||| |||| ||| | |||| | |||||||||||| ||||||||||||||| ||||||  |||||||    
T  38471307 ttaacttatttttgaatttcattttggtcccttaactttaaattgtttcaatttggttccataaatcttcttccgtttactattttggt 38471395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 8188305 - 8188178
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| |||||||||||| | |||||| ||||||||  ||| ||| |||| | |||||||||||| |||| ||||| ||  |||||     ||||| |     
T  8188305 tggtcccttaacttattttattttttcagtttgatcctttaactattaagtgtgtcaatttggtcctataagtcttcctccatttactaacgtggtcctc 8188206  T
Q  206 tctgtttgttttttaatgtctaaaattt 233  Q
    || ||| |||||||||||||||||||||    
T  8188205 tccgttagttttttaatgtctaaaattt 8188178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 5061039 - 5061105
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| ||||||||||||| | ||||| |||| |||| |||| ||||||| | |||||||||||||    
T  5061039 tggtcccttaacttatttttggatttcattttggtcccctaatgataaagtgtctcaatttggtccc 5061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 15510368 - 15510302
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| ||||||||||||  | ||||| ||||||||| ||| |||||||| | |||||||||||||    
T  15510368 tggtcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtccc 15510302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 41905172 - 41905234
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaa 154  Q
    ||||||| ||||| |||||| ||||||||||||| ||||||| |||| |||| ||| ||||||    
T  41905172 cttaatacatcatttggtcccttaacttatttttggttttcattttggtcccctaactataaa 41905234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 328273 - 328212
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataa 153  Q
    ||||||| ||||| || ||  |||||||||||||||||||||||||| |||| ||| |||||    
T  328273 cttaatacatcatttgatcacttaacttattttttgttttcaatttggtcccctaactataa 328212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 137
Target Start/End: Complemental strand, 30916237 - 30916192
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaattt 137  Q
    ||||||| ||||| |||||| |||||||||||| ||||||||||||    
T  30916237 cttaatacatcatttggtcccttaacttattttatgttttcaattt 30916192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 42980807 - 42980718
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||| |||||||| | ||||| |||| ||| |||| |||||||| | ||||||||||| |||| ||||||| |  |||||| ||||||||    
T  42980807 ttaatttatttttagatttcattttggtcctataactataaagtgtctcaatttggtctcatatatcttctgccatttaccattttggtc 42980718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 6629728 - 6629792
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagt 156  Q
    ||||||| ||||| |||||| ||||||||||| | ||||||| |||| |||| ||| ||||||||    
T  6629728 cttaatacatcatttggtcccttaacttatttgtggttttcactttggtcccctaactataaagt 6629792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 42979471 - 42979555
Alignment:
Q  118 ttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||||| | ||||| |||| |||  ||| |||||||| |||||||||||||| |||| |||||| | ||||||  ||||||||    
T  42979471 ttatttttggatttcattttggtcctctaactataaagtgtttcaatttggtccaataattcttctgccgtttactattttggtc 42979555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 29739762 - 29739619
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||  |||| |||||||| ||||||||||||||||| ||| |||||||| | ||||||||||||||||||| |||||| |||||    
T  29739762 cttaatacatcatttggtctcttaatttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccgttta 29739663  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
    || ||||||||||||| |||||||||||||||| ||| ||||||    
T  29739662 ccattttggtcatgtccgtttgttttttaatgtttaatattttt 29739619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 36940152 - 36939992
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||| ||||||| ||||||||| ||| |||||||| ||||||||||||  |||||||||||| | |||||    
T  36940152 cttaatacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgttta 36940053  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaa-aatttttatattgtttcaaccat 251  Q
    |  |||||||||| || |||  ||||||||| ||||| |||||| |||| |||||||||||    
T  36940052 ctattttggtcatctccgttaattttttaatatctaataattttgatatggtttcaaccat 36939992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 19915011 - 19914882
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| ||||||||||||  |||||||||||| |||| ||| |||||||| | ||||||||  |||||||||||||| | ||||||| ||||||||||     
T  19915011 tggtcctttaacttattttgggttttcaatttggtcccttaactataaagtgtctcaatttgtacccataaatcttctaccgtttaccattttggtcata 19914912  T
Q  206 tctgtttgttttttaatgtctaaaattttt 235  Q
    || |||||||| ||||||||||| ||||||    
T  19914911 tccgtttgtttattaatgtctaatattttt 19914882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 31623903 - 31623992
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||||||| |||| ||| |||||||| ||||||||||||||||||||||||    
T  31623903 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatctt 31623992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 244
Target Start/End: Complemental strand, 37474155 - 37474002
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |  ||| ||||||||||| | |||||||||||| |||| ||| |||||||| | ||||||||||||   ||||||||||| |||||    
T  37474155 cttaatacatcatttcatcccttaacttatttatggttttcaatttggtcccttaactataaagtgtctcaatttggtcctggaaatcttcttccgttta 37474056  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt-atattgttt 244  Q
     | | |||||| |||| |||| ||||||||||||||| |||||| |||||||||    
T  37474055 tcatcttggtcctgtccgtttattttttaatgtctaatatttttgatattgttt 37474002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 24069551 - 24069455
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||| ||||||||||||| ||||||| ||||||||| ||| |||||||| | ||||||||||||||||| |||||| | ||||||| ||||||||    
T  24069551 tggtcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgtttaccattttggtc 24069455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 24068341 - 24068464
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| ||||||||||||| ||||||| |||| |||| ||| |||||||| | ||||||||||||||||| ||||| || ||||||   ||||||| |     
T  24068341 tggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatttggtcctc 24068440  T
Q  206 tctgtttgttttttaatgtctaaa 229  Q
    || ||| |||||||||||||||||    
T  24068441 tccgttagttttttaatgtctaaa 24068464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 31625502 - 31625393
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| || ||| ||||||||||||| |||||||||||| |||| |||||||||||| | |||||||||||||||||||||| | | |||||    
T  31625502 cttaatacatcatttgatcc-ttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgttta 31625404  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  31625403 ctattttggtc 31625393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 36756061 - 36756187
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||| ||||| |||||| |||||||| |||||||| ||||||| ||||| |||||||||| |   |||||    
T  36756061 cttaatacatcatttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgttta 36756160  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
    |  |||||||||| || ||| ||||||    
T  36756161 ctattttggtcatctccgttagttttt 36756187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 38591126 - 38591016
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| |||||||||||||  ||||||||||| |||| ||| |||||||| | |||||||||||||||||||||| | | |||||    
T  38591126 cttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgccgttta 38591027  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  38591026 ctattttggtc 38591016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 27750719 - 27750630
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    ||||||||||||| ||||||||||||||||  |||||||||||| | |||||||||||||||||||||| |  |||||||  ||||||||    
T  27750719 ttaacttatttttggttttcaatttgatccgttaattataaagtatctcaatttggtcccataaatcttatattgtttactattttggtc 27750630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 36070168 - 36070285
Alignment:
Q  85 ttatagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttctt 184  Q
    |||||| ||||||| ||||| || ||| |||| |||||||| |||||||||||| |||| ||| |||||||| | |||||||| |||||||||||||||     
T  36070168 ttataggcttaatacatcatttgatcccttaatttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttctg 36070267  T
Q  185 ctgtttaccgttttggtc 202  Q
    | ||||||  ||||||||    
T  36070268 ccgtttactattttggtc 36070285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 236
Target Start/End: Original strand, 34616126 - 34616275
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatc--ttcttct--- 186  Q
    ||||||| |||||||| ||| |||||||||||| | || ||| ||||||| | ||| |||||||| | ||||||||||||||||||||  ||||| |       
T  34616126 cttaatacatcatctgatcccttaacttattttattttctcagtttgatctcttaactataaagtgtctcaatttggtcccataaatcttttcttttgtc 34616225  T
Q  187 gtttaccgttttggtcatgtctgtttgttttttaatgtctaaaattttta 236  Q
    ||||||| |||||||||| || ||| |||||||||||| ||| |||||||    
T  34616226 gtttaccattttggtcatttccgttagttttttaatgtttaatattttta 34616275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 36071497 - 36071378
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| | |||  ||||||||| |||||||||||||||| |||| ||| |||| ||| |||||| |||||||||||| |||||| | |||||    
T  36071497 cttaatacatcatttagtctcttaacttatattttgttttcaatttggtcccttaactatagagtatttcaaattggtcccataactcttctaccgttta 36071398  T
Q  192 ccgttttggtcatgtctgtt 211  Q
     | |||||||||| ||||||    
T  36071397 tcattttggtcatctctgtt 36071378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 207
Target Start/End: Complemental strand, 43278040 - 43277925
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| || ||| |||||||||||||| |||| |||||| |||| ||| |||||| | | ||||||||||||| |||||||| | | |||||    
T  43278040 cttaatatatcatttgatcccttaacttattttttatttttaatttggtcccctaactataaaatgtctcaatttggtcccgtaaatcttatgccgttta 43277941  T
Q  192 ccgttttggtcatgtc 207  Q
    |  |||||||||||||    
T  43277940 ctattttggtcatgtc 43277925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 44606160 - 44606235
Alignment:
Q  116 acttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    |||||||||| ||||||| |||| |||| ||| |||| ||| ||||||||||||||||||||||||||||||||||    
T  44606160 acttatttttggttttcactttggtcccctaactatatagtgtttcaatttggtcccataaatcttcttctgttta 44606235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 16363931 - 16363821
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    |||||||||| || |||||| ||||||||||||| ||||||| |||| |||  ||| |||||||| | |||||||| ||||||||||| ||| |||||||    
T  16363931 cttaatatataatttggtcccttaacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcccataaatcgtctgctgttta 16363832  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  16363831 ctattttggtc 16363821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 41866891 - 41866977
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    ||||||| | ||| |||||| |||||||||||||  |||||| ||||||||| ||| |||||||| |||||||||||||||||||||    
T  41866891 cttaatacaccatttggtcccttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtcccataaat 41866977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 7486095 - 7486184
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||| |||||||| ||||||| ||||||||| ||| ||||||||  ||||||||||||||||||||||| | ||||||||  ||||||||    
T  7486095 ttaatttatttttggttttcattttgatcccttaactataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtc 7486184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 37276362 - 37276273
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||| |||| ||||||||  |||||| ||||||||| ||| |||||||| | ||||||||||||||||||||||    
T  37276362 cttaatacatcatttggtcccttaatttatttttgattttcactttgatcccttaactataaagtgtctcaatttggtcccataaatctt 37276273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 4807364 - 4807452
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||||| |||||  ||||| |||||||||||||  |||| |||||| |||| ||| ||||| |||||||||||||||||||||||||||    
T  4807364 ttaatacatcattcggtcctttaacttatttttgatttttaatttggtcccctaactataacgtttttcaatttggtcccataaatctt 4807452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 183
Target Start/End: Complemental strand, 43386826 - 43386730
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    |||| ||||||| ||||| |||||| ||||||||||||| ||||||| |||| |||| ||| |||||| | | ||||||||||||||||| ||||||    
T  43386826 ataggcttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactcttct 43386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 183
Target Start/End: Original strand, 117045 - 117136
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||||| ||| | || ||| ||||||||||||| ||||||| |||| |||| |||||||||| | |||||||||| |||||||||||||||    
T  117045 cttaatacatcgtttgatcccttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttct 117136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 35943904 - 35944031
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattat-aaagtttttcaatttggtcccataaatcttcttctgttt 190  Q
    ||||||| ||| | |||||| ||||||||||||| ||||||| |||| |||| ||||||| ||| | | |||||||||||||||||||||| | | ||||    
T  35943904 cttaatacatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagttt 35944003  T
Q  191 accgttttggtcatgtctgtttgttttt 218  Q
    ||  |||||||||| || ||| ||||||    
T  35944004 actattttggtcatctccgttagttttt 35944031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 45385899 - 45385824
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||||| ||||||||||||| | ||||| |||| ||||||||||||||||| |||||||||| ||| |||||||||    
T  45385899 tggtcccttaacttatttttggatttcattttggtcccataattataaagtgtttcaatttgatcctataaatctt 45385824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 13367169 - 13367059
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| |||||| ||  | |||||||||||| | |||||| |||| |||| ||| |||||||| ||| |||||||||||||||||||||| | |||||    
T  13367169 cttaatacatcatccggatccttaacttattttattttttcactttggtcccttaactataaagtgttttaatttggtcccataaatcttctgccgttta 13367070  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  13367069 ctattttggtc 13367059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 29738288 - 29738414
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||| | |||||| |||||||||||||| ||||||||||| ||   ||| |||||||| | ||||||| ||| ||||| |||||| | |||||    
T  29738288 cttaatacatcgtttggtcccttaacttattttttattttcaatttggtctattaactataaagtgtctcaatttagtctcataagtcttctgccgttta 29738387  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
    || |||||||| | || ||||||||||    
T  29738388 cctttttggtcctctccgtttgttttt 29738414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 41868035 - 41867949
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    ||||||| ||||| |||||| |||| |||||||| ||||||| |||| |||| ||| |||||||| | |||||||||||||||||||    
T  41868035 cttaatacatcatttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtcccataaat 41867949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 19913490 - 19913599
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| ||| | |||||| |||||||||||||   |||||||||| |||  ||| |||||||| ||||||||||||||||||| |||||| | |||||     
T  19913490 ttaatacatcctttggtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataagtcttctgcggtttat 19913589  T
Q  193 cgttttggtc 202  Q
    | ||||||||    
T  19913590 cattttggtc 19913599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 38589818 - 38589906
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||| |||||||||||| ||||||||||||| |||  ||| ||||||||   ||||||||||||||||||||||    
T  38589818 cttaatacatcatttggtcccttaacttatttt-tgttttcaatttggtcctctaactataaagtggctcaatttggtcccataaatctt 38589906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 39546775 - 39546670
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    |||||||||||| |||||||| |||| | || ||| | |||||| | ||||||||||||||||||| || | | |||||||||||||||||| || |||     
T  39546775 ttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatattatgccgtttaccgttttggtcatctccgtta 39546676  T
Q  213 gttttt 218  Q
    ||||||    
T  39546675 gttttt 39546670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 43275747 - 43275836
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||  |||||||||||||||||||||||||| | || ||| |||||||| | ||||||| ||||||||| ||||    
T  43275747 cttaatacatcatttggtctcttaacttattttttgttttcaatttggttccctaactataaagtgtctcaatttagtcccataactctt 43275836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 233
Target Start/End: Original strand, 37274905 - 37275025
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    ||||||||||||| | ||||| |||| |||  ||| |||||||| | |||||||| ||||||||||||||| | ||||||  |||||||| | || |||     
T  37274905 ttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgtta 37275004  T
Q  213 gttttttaatgtctaaaattt 233  Q
    |||||||||||| ||| ||||    
T  37275005 gttttttaatgtataacattt 37275025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 37982 - 38124
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||| | |||||| ||||||||||||||||||| | |||  |||| ||| |||||||| ||| ||||||||| ||||| ||||| || |||||    
T  37982 cttaatacatcgtttggtcccttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatttggtctcataagtcttcctccgttta 38081  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
    |  || ||||| | || ||| | ||||||||||||||| |||||    
T  38082 ctattgtggtcctctccgttag-tttttaatgtctaaatttttt 38124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 35945556 - 35945446
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| || || |||||| ||||||||||||||||||||| |||  |||| ||| |||||| | | ||| |||||||||||| ||||||| | |||||    
T  35945556 cttaatacattatttggtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccatatatcttctgcagttta 35945457  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  35945456 ctattttggtc 35945446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 37323345 - 37323435
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttc 182  Q
    ||||||| ||||| |||||| |||| |||||||| |||||||||||| | || ||| |||||| | | |||||||| ||||||||||||||    
T  37323345 cttaatacatcatttggtcccttaatttatttttggttttcaatttggttccctaactataaaatgtctcaatttgatcccataaatcttc 37323435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 37472400 - 37472510
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| | |||| ||||||||||||| ||||| |||||| |||  ||| |||||||| | ||||||||||||||||| |||| |   |||||    
T  37472400 cttaatacatcatttcgtcctttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttttgtcgttta 37472499  T
Q  192 ccgttttggtc 202  Q
    || ||||||||    
T  37472500 ccattttggtc 37472510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 204
Target Start/End: Original strand, 39515210 - 39515308
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcat 204  Q
    |||||| ||||||||||||| ||||||| ||||||||| | | |||||||| | ||||||||||| ||||| |||| | |  |||||| ||||||||||    
T  39515210 tggtcccttaacttatttttggttttcattttgatcccctgactataaagtgtctcaatttggtctcataactcttttgccatttacctttttggtcat 39515308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 192
Target Start/End: Original strand, 22619907 - 22619992
Alignment:
Q  107 ggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    ||||| |||||||||||| | || ||| ||||||||| ||| | | |||| | ||||||||||||||||||||||| |||||||||    
T  22619907 ggtcccttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttggtcccataaatcttcctctgtttac 22619992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 22621238 - 22621113
Alignment:
Q  107 ggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgt 206  Q
    ||||| |||||||||||| | || ||| ||||||||| ||| ||| |||| |  |||||||||||||||| ||||| ||||||||    | ||||| | |    
T  22621238 ggtcccttaacttattttattttctcagtttgatcccttaactattaagtgtggcaatttggtcccataagtcttcctctgtttattaatgtggtcctct 22621139  T
Q  207 ctgtttgttttttaatgtctaaaatt 232  Q
    ||||| |||||||||||| |||||||    
T  22621138 ctgttagttttttaatgtataaaatt 22621113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 10052101 - 10052181
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    ||||||||||||| |||||| |||||||||| ||  |||||| |||| |||| |||||||||||| | |||| ||||||||    
T  10052101 cttaatatatcatttggtcccttaacttattcttgattttcactttggtcccctaattataaagtgtctcaaattggtccc 10052181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 7487511 - 7487444
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaa 154  Q
    |||||||||||| ||||| |||||| |||| |||||||| ||||||| ||||||||| ||| ||||||    
T  7487511 atagacttaatacatcatttggtcctttaatttatttttcgttttcactttgatcccctaactataaa 7487444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 14820204 - 14820279
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||||| ||||||||||||| | ||| |||||| |||| ||| |||||||| | ||||||| ||||||||||||||    
T  14820204 tggtcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtcccataaatctt 14820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 1570311 - 1570247
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtc 170  Q
    |||||| |||||||||||||  ||||||||||| || ||||| |||||||| | |||||||||||    
T  1570311 tggtcctttaacttatttttcattttcaatttggtctcataactataaagtgtctcaatttggtc 1570247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 7770995 - 7770927
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||||||||||||| |||||| |||||||   ||| |||||||| ||||||||||||| ||||| ||||    
T  7770995 ttaacttattttttattttcattttgatcatctaactataaagtgtttcaatttggtctcataactctt 7770927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 183
Target Start/End: Complemental strand, 7796931 - 7796835
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||| |||||||||  | |||| | |||||||||||||| |||| | |||||||   |||||||||||| | ||||||||||| ||||| ||||||    
T  7796931 atagatttaatatatgctttggttccttaacttattttttatttttattttgatcatctaattataaagtgtctcaatttggtctcataactcttct 7796835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 10053863 - 10053783
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    ||||||| ||||| | |||| ||||||||||||| ||||||| |||| |||| ||| |||||||| | |||| ||||||||    
T  10053863 cttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtccc 10053783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 8395016 - 8395078
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataatt 149  Q
    |||| ||||||||||||| |||||  ||||||||||||| ||||| | |||| ||||||||||    
T  8395016 ataggcttaatatatcatttggtctcttaacttatttttggtttttattttggtcccataatt 8395078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 24853421 - 24853363
Alignment:
Q  114 taacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||||||| |||||||||||||| |||||||| | |||| |||| | ||||||||||    
T  24853421 taacttatttgttgttttcaatttggtcccataactctaaatttttcctatttggtccc 24853363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 33510481 - 33510424
Alignment:
Q  114 taacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcc 171  Q
    |||||||||||| | ||||||||||||||| ||||| |||||| | ||| ||||||||    
T  33510481 taacttatttttggatttcaatttgatcccttaattttaaagtgtctcagtttggtcc 33510424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 37324786 - 37324717
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttc 182  Q
    ||||||||||||| ||||| |||||| |||| ||| |||||| | | ||||||||||| || ||||||||    
T  37324786 ttaacttatttttggtttttaatttggtcccctaactataaaatgtctcaatttggtctcaaaaatcttc 37324717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 3271895 - 3271979
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataa 176  Q
    ||||||| || || |||||| |||||||||||||   ||||| ||||||||| ||||| ||||   | |||||||||||||||||    
T  3271895 cttaatacatgatttggtcccttaacttatttttgaatttcattttgatcccttaattttaaaccgtctcaatttggtcccataa 3271979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 30864574 - 30864490
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataa 176  Q
    ||||||| || || |||||| |||||||||||||   ||||| ||||||||| ||||| ||||   | |||||||||||||||||    
T  30864574 cttaatacatgatttggtcccttaacttatttttgaatttcattttgatcccttaattttaaaccgtctcaatttggtcccataa 30864490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 41178477 - 41178557
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    ||||||||||  | |||||| ||||||||||||||  ||||||||||||||  ||| | |||| | | |||||||||||||    
T  41178477 cttaatatatgttttggtcccttaacttatttttttatttcaatttgatcctctaactttaaattgtctcaatttggtccc 41178557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 37867753 - 37867896
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||| ||||||||||||||||| ||| |||||||| | |||||||||||||| |||| |||||  |||||    
T  37867753 cttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccacaaattttctttcgttta 37867852  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
     | |||||||||||||||||||||||||||||| ||| ||||||    
T  37867853 tcattttggtcatgtctgtttgttttttaatgtttaatattttt 37867896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 12958414 - 12958556
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| |||| | ||||||||||||| ||||| ||||||||||| ||| |||||||| | ||||||||||||||||||| ||||||  ||||    
T  12958414 cttaatatatcatttggttc-ttaacttatttttggtttttaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccattta 12958512  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
     | |||||||||| || |||||||||||||||| ||| ||||||    
T  12958513 tcattttggtcatttccgtttgttttttaatgtttaatattttt 12958556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 93 - 235
Target Start/End: Complemental strand, 10368503 - 10368361
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| ||||| |||||| |||| ||||||||  |||||||||||||||| ||| |||||||| | |||||||| |||||||||| |||||| |||||     
T  10368503 ttaatacatcatttggtcccttaatttatttttgattttcaatttgatcccctaactataaagtgtctcaatttgatcccataaattttcttccgtttat 10368404  T
Q  193 cgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
    | ||||||||||||| |||||||||||||| | ||| ||||||    
T  10368403 cattttggtcatgtccgtttgttttttaatatttaatattttt 10368361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 236
Target Start/End: Original strand, 11386642 - 11386765
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    ||||||||||||| ||||| |||||| |||| ||| |||||||| |||||||||| ||||||||| ||||| | ||||||| |||||||  | |||||||    
T  11386642 ttaacttatttttagtttttaatttggtcccttaactataaagtgtttcaatttgatcccataaaccttctaccgtttaccattttggttttatctgttt 11386741  T
Q  213 gttttttaatgtctaaaattttta 236  Q
    |||||||||||| ||| |||||||    
T  11386742 gttttttaatgtttaatattttta 11386765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 7036963 - 7037089
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||| | ||||| |||  |||| ||| |||||||| ||||||||||||||||||| |||||| | |||||    
T  7036963 cttaatacatcatttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgccgttta 7037062  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
    || |||||||||| || |||| |||||    
T  7037063 ccattttggtcatttccgtttattttt 7037089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 181
Target Start/End: Original strand, 2581803 - 2581889
Alignment:
Q  95 aatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||| ||||| ||||||  |||||||||||| ||||||||||||||||| ||| |||||||| | ||||||||||||||||||||||    
T  2581803 aatacatcatttggtcctctaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatctt 2581889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 236
Target Start/End: Complemental strand, 21012198 - 21012055
Alignment:
Q  89 agacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgt 188  Q
    |||||||||||||||| ||||||     ||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||  ||||||||    ||    
T  21012198 agacttaatatatcatttggtccg----cttattttttgttttcattttgatcccctaactataaagtgtttcaatttggtccctcaaatcttccgtcgt 21012103  T
Q  189 ttaccgttttggtcatgtctgtttgttttttaatgtctaaaattttta 236  Q
    ||||  |||||||||| || ||| |||||| ||||| ||| |||||||    
T  21012102 ttactattttggtcatctccgttagtttttgaatgtataatattttta 21012055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 28109990 - 28109878
Alignment:
Q  90 gacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtt 189  Q
    |||||||||||| || |||||| ||||||||||||| |||||||||||| || |||||  ||||||| | ||||||||||||||||| | ||||   |||    
T  28109990 gacttaatatatgatttggtcccttaacttatttttcgttttcaatttggtctcataacgataaagtatctcaatttggtcccataacttttctgtagtt 28109891  T
Q  190 taccgttttggtc 202  Q
    |||| ||||||||    
T  28109890 taccattttggtc 28109878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 225
Target Start/End: Original strand, 6706937 - 6707056
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| ||||||||||||| | ||||| |||| |||| ||| |||||||| | |||||||||| ||||||||||||||| ||||||  ||||||||       
T  6706937 tggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggttccataaatcttcttccgtttactattttggtcccc 6707036  T
Q  206 tctgtttgttttttaatgtc 225  Q
    || ||| |||||||||||||    
T  6707037 tccgttagttttttaatgtc 6707056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 7038451 - 7038299
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||| | ||||| |||| |||| ||| |||||||| | |||||||||||||||||        | |||||    
T  7038451 cttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa--------ccgttta 7038360  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt-atattgtttcaaccat 251  Q
    || |||||||| | || |||||||||||||||| ||  |||||| ||||||||||||||||    
T  7038359 cctttttggtcctttccgtttgttttttaatgtttactatttttgatattgtttcaaccat 7038299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 23177670 - 23177781
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatccca-taattataaagtttttcaatttggtcccataaatcttcttctgttt 190  Q
    ||||||| ||||| |||||| |||| |||||||| ||||||| |||| ||||  ||| |||||||| | |||||||||||||||||||||||| | ||||    
T  23177670 cttaatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgttt 23177769  T
Q  191 accgttttggtc 202  Q
    ||| ||||||||    
T  23177770 accattttggtc 23177781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 23588927 - 23589038
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatccca-taattataaagtttttcaatttggtcccataaatcttcttctgttt 190  Q
    ||||||| ||||| |||||| |||| |||||||| ||||||| |||| ||||  ||| |||||||| | |||||||||||||||||||||||| | ||||    
T  23588927 cttaatacatcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgttt 23589026  T
Q  191 accgttttggtc 202  Q
    ||| ||||||||    
T  23589027 accattttggtc 23589038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 42246602 - 42246698
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||| ||||||| ||||| ||||||| ||||||||| |||||||||||| |||||||||| |||||||| |||| | | ||||||  ||||||||    
T  42246602 tggtcccttaacttgtttttggttttcattttgatcccctaattataaagtgtttcaatttgatcccataactcttttaccgtttactattttggtc 42246698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 37869159 - 37869033
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||  | |||||| |||||||||||||  ||||||||||| |||| ||| |||||||| | ||||||| ||| ||||| ||||||   |||||    
T  37869159 cttaatatattgtttggtcccttaacttatttttgattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgttta 37869060  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
    || |||||||| | || ||||||||||    
T  37869059 cctttttggtcttctccgtttgttttt 37869033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 12854209 - 12854132
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    |||||| ||||||||||||| | ||||| |||| |||| ||| |||||||| | ||||||||||||||||||||||||    
T  12854209 tggtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttct 12854132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 233
Target Start/End: Complemental strand, 23178993 - 23178860
Alignment:
Q  100 atcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttg 199  Q
    ||||| |||||| ||||||||||||| ||||||| |||| |||| ||| |||||| | ||| || ||||||||||||||||||    |||||   |||||    
T  23178993 atcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttg 23178894  T
Q  200 gtcatgtctgtttgttttttaatgtctaaaattt 233  Q
    ||||| || ||| |||||||||||| ||| ||||    
T  23178893 gtcatctccgttagttttttaatgtgtaacattt 23178860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 100 - 233
Target Start/End: Complemental strand, 23590250 - 23590117
Alignment:
Q  100 atcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttg 199  Q
    ||||| |||||| ||||||||||||| ||||||| |||| |||| ||| |||||| | ||| || ||||||||||||||||||    |||||   |||||    
T  23590250 atcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttg 23590151  T
Q  200 gtcatgtctgtttgttttttaatgtctaaaattt 233  Q
    ||||| || ||| |||||||||||| ||| ||||    
T  23590150 gtcatctccgttagttttttaatgtgtaacattt 23590117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 40174817 - 40174724
Alignment:
Q  158 tttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgtttgttttttaatgtctaaaatttttatattgtttcaaccat 251  Q
    ||||||||||||||||||||||||||  |||||||  |||||||||| || ||| ||||||||||||  | | |||||||||  ||||||||||    
T  40174817 tttcaatttggtcccataaatcttctgttgtttactattttggtcatctccgttagttttttaatgttaatattttttatatgatttcaaccat 40174724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 35799508 - 35799619
Alignment:
Q  91 acttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttt 190  Q
    |||||||| ||||| |  ||| ||||||||||||| |||||||||||  |||| ||| |||||||| | ||||||||||| ||||| | |||||| ||||    
T  35799508 acttaatacatcatttcatcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtctcataacttttcttccgttt 35799607  T
Q  191 accgttttggtc 202  Q
    |||  |||||||    
T  35799608 acctctttggtc 35799619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 204
Target Start/End: Original strand, 12852897 - 12852995
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcat 204  Q
    |||||| |||||||| |||| | ||||| |||| |||| ||| |||||||| | ||||||||||||||||||||||||   ||||||  ||||||||||    
T  12852897 tggtcccttaacttacttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtttactattttggtcat 12852995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 41796071 - 41795989
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccat 174  Q
    ||||||| ||||| | |||| |||||||||||||  |||||| ||||||||| ||| |||||||| | |||||||||||||||    
T  41796071 cttaatacatcatttagtcccttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtcccat 41795989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 4701609 - 4701542
Alignment:
Q  89 agacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagt 156  Q
    |||||||||||||||| |||||| |||| ||||||||  |||||| ||||||||| ||| ||||||||    
T  4701609 agacttaatatatcatttggtcccttaatttatttttgattttcactttgatcccctaactataaagt 4701542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 12959824 - 12959717
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||| | |||| | |||||||||||||  |||| |||||| |||| |||  ||||||| | ||||||| |||| ||||||||||| | |||||    
T  12959824 cttaatatatcgtttggttccttaacttatttttgatttttaatttggtcccttaacaataaagtgtctcaatttagtccgataaatcttctgccgttta 12959725  T
Q  192 ccgttttg 199  Q
    || |||||    
T  12959724 cctttttg 12959717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 42249893 - 42249846
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataa 153  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  42249893 tggtcctttaacttattttttgttttcattttgatcccctaattataa 42249846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 11575574 - 11575500
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaattt 166  Q
    ||||||| ||||| |||||||||||||||||||| ||||| | |||| |||| ||| |||||| | |||||||||    
T  11575574 cttaatacatcatttggtccattaacttatttttggttttaattttggtcccctaactataaaatgtttcaattt 11575500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 2583665 - 2583576
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||| | ||||||  |||||||||||| ||||| |||||  |||| ||| |||||||| | ||||||||||| ||||||||||    
T  2583665 cttaatacatcgtttggtcctctaacttatttttggtttttaattttgtcccctaactataaagtgtctcaatttggtctcataaatctt 2583576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 3532191 - 3532280
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||||||| | || ||| |||| ||||||| | |||||| ||||||||| ||||||| |||| | ||||||||||| ||||| ||||    
T  3532191 cttaatatatcctatgatcccttaatttattttattttttcagtttgatcccttaattattaagtgtgtcaatttggtcacataagtctt 3532280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 14509200 - 14509297
Alignment:
Q  86 tatagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||| ||||||| ||| || | ||| |||||||||||| | || ||| |||| |||| ||| |||||||| ||| |||| |||||||||||||||||    
T  14509200 tataggcttaatacatcctccgatcccttaacttattttattttctcactttggtcccttaactataaagtgttttaattcggtcccataaatcttct 14509297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 29424717 - 29424612
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| ||||||||||||| ||||| |  ||| |||| ||| |||||||| ||||||||||||||| | ||| |||| | |||||  ||||||||| |     
T  29424717 tggtcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtcccttgaatattctgccgtttattgttttggtcctc 29424618  T
Q  206 tctgtt 211  Q
    ||||||    
T  29424617 tctgtt 29424612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 35801150 - 35801073
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    |||||| ||||||| |||| | |||||| ||| ||||| ||| |||||||| ||||||||||||||| ||| ||||||    
T  35801150 tggtcccttaacttgttttctattttcattttcatcccttaactataaagtgtttcaatttggtcccctaactcttct 35801073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 42027190 - 42027290
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||| | |||||| |||||||||||||  |||||| |||| |||  ||| || ||| | | ||||||||||||||||||| |||| |||||||    
T  42027190 cttaatacatcgtttggtcccttaacttatttttgattttcattttggtcctctaactacaaaatgtctcaatttggtcccataaattttctgctgttta 42027289  T
Q  192 c 192  Q
    |    
T  42027290 c 42027290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 2305558 - 2305617
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    ||||||||||||| | ||||| ||||||||| ||| |||||||| | |||||||||||||    
T  2305558 ttaacttatttttggatttcattttgatcccctaactataaagtgtctcaatttggtccc 2305617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 42029077 - 42028986
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||||| ||||| |||||| ||||| ||||||| ||||||| |||| ||   ||| |||||||| | || |||||||||||||| ||||||    
T  42029077 cttaatacatcatttggtcccttaacgtatttttggttttcattttggtcatctaactataaagtgtctcgatttggtcccataattcttct 42028986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 3666373 - 3666307
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| ||||||||||||  | ||||| |||| |||||||| |||||||| | |||||||||||||    
T  3666373 tggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtccc 3666307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 5564070 - 5564136
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| |||||||||||||   ||||| |||| |||| |||||||||||| | |||||||||||||    
T  5564070 tggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtccc 5564136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 5565250 - 5565184
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| |||||||||||||   ||||| |||| |||| |||||||||||| | |||||||||||||    
T  5565250 tggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtccc 5565184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 10367236 - 10367362
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||  | |||| | |||||||||||||  ||||||||||| |  | ||| |||||||| | ||||||| ||| ||||| |||||| | |||||    
T  10367236 cttaatatattgtttggttccttaacttatttttgattttcaatttggtttcttaactataaagtgtctcaatttagtctcataagtcttctgccgttta 10367335  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
    || |||| ||| | || ||||||||||    
T  10367336 cctttttagtcgtctccgtttgttttt 10367362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 32614382 - 32614508
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| |||||| ||| |||||||| | |||||| |||| |||| ||| ||| | || ||||||||| || |||||| |||| |   |||||    
T  32614382 cttaatatatcatttggtcccttagcttattttattttttcattttggtcccctaactatcacgtgtttcaatttagttccataactcttatgtcgttta 32614481  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
    || |||| ||| | || ||||||||||    
T  32614482 ccattttagtcctctccgtttgttttt 32614508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 7490293 - 7490204
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||||||||| | || ||| |||| |||  |||||||||| | | |||||||||||||||||||||| |  |||||||  ||||||||    
T  7490293 ttaacttattttattttctcagtttggtcctttaattataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtc 7490204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 1625073 - 1625006
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||||||||| | ||||| ||||||| | ||| |||||||| | |||||||||||| |||||||||    
T  1625073 ttaacttatttttggatttcattttgatctc-taactataaagtgtctcaatttggtcctataaatctt 1625006  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 20921472 - 20921564
Alignment:
Q  86 tatagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    ||||| ||||||||||||| |||||| |||| |||||||   ||||||||||| |||| ||| ||| ||   |||||| |||||||| |||||    
T  20921472 tataggcttaatatatcatttggtcctttaatttattttcaattttcaatttggtcccctaaatattaaacgtttcaaattggtcccctaaat 20921564  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 42368426 - 42368343
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataa 176  Q
    ||||||| || || |||||| ||||||||||||| | ||||| |||| |||| ||| |||||||| | || ||||||||||||||    
T  42368426 cttaatacatgatttggtcc-ttaacttatttttggatttcattttggtcccctaactataaagtgtctcgatttggtcccataa 42368343  T

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Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 25153655 - 25153798
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||   ||||||||||| |||| ||| |||||||| | |||||||||||||||||||||||||| |||||    
T  25153655 cttaatacatcatttggtcccttaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttcttccgttta 25153754  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
    ||||||||||| |||| || ||||||||||| ||||| ||||||    
T  25153755 ccgttttggtcttgtccgtgtgttttttaatatctaatattttt 25153798  T

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Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 111 - 251
Target Start/End: Complemental strand, 24873697 - 24873556
Alignment:
Q  111 cattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgt 210  Q
    ||||||||||||||||||||||| |||||| || ||| |||||||| | ||||||||||||||||| |||||| | ||||||| |||||||||| || ||    
T  24873697 cattaacttattttttgttttcattttgatgccctaactataaagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgt 24873598  T
Q  211 ttgttttttaatgtctaaaattttt-atattgtttcaaccat 251  Q
    |||||||||||||| ||  |||||| ||||||||||||||||    
T  24873597 ttgttttttaatgtttactatttttgatattgtttcaaccat 24873556  T

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Target: chr7; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 92 - 217
Target Start/End: Original strand, 46457067 - 46457192
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||| | |||| | ||||||||||||| ||||||||||||||||| ||| |||||||| | ||||||||||||||||||||||||||  ||||    
T  46457067 cttaatacatcgtttggttccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtcccataaatcttcttccattta 46457166  T
Q  192 ccgttttggtcatgtctgtttgtttt 217  Q
    || |||||||||||||||||||||||    
T  46457167 ccattttggtcatgtctgtttgtttt 46457192  T

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Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 25155054 - 25154929
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| ||||| |||||| ||||||||||||| ||||||||||||||||| ||| |||||||| | |||||||  || ||||||||||||||||||||     
T  25155054 ttaatacatcatttggtcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatcttcttctgtttat 25154955  T
Q  193 cgttttggtcatgtctgtttgttttt 218  Q
    | |||||||||| || ||||||||||    
T  25154954 cattttggtcatctccgtttgttttt 25154929  T

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Target: chr7; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 236
Target Start/End: Complemental strand, 4858463 - 4858319
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||| ||||||| ||||||||| ||| |||||| | | ||||||||||||||||||||||||  ||||||    
T  4858463 cttaatacatcatttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttctgttgttta 4858364  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttta 236  Q
    |  ||||  || | ||| || ||||||| |||||||| |||||||    
T  4858363 ctattttaatcctctctattagttttttgatgtctaatattttta 4858319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 236
Target Start/End: Complemental strand, 40926638 - 40926494
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| | |||| ||||||||||||| ||||||| |||| |||| ||| |||||||| | |||||||||||| |||||| |||| | |||||    
T  40926638 cttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataaattttctaccgttta 40926539  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttta 236  Q
    ||||||||||| | || |||   |||||||||||||| |||||||    
T  40926538 ccgttttggtcctctccgttaactttttaatgtctaatattttta 40926494  T

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Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 18802512 - 18802417
Alignment:
Q  88 tagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||| ||| |||||||| | ||||||| ||||||||||| ||||    
T  18802512 tagacttaatacatcatttggtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataaattttct 18802417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 46458832 - 46458706
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||| | |||||| |||| | ||||||  ||||||||||| |||| ||| |||||||| | |||||||||||||||||||||||||| |||||    
T  46458832 cttaatacatcgtttggtcccttaagtaatttttgattttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttcttccgttta 46458733  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
    || |||||||| | || ||||||||||    
T  46458732 ccattttggtcctctccgtttgttttt 46458706  T

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Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 19278350 - 19278460
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||| | ||||| |||| |||| |||||||||||| | ||||||||||||||||| |||||| | |||||    
T  19278350 cttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccgttta 19278449  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  19278450 ctattttggtc 19278460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 46675053 - 46674943
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| || ||| ||||||||||||| ||||||||||||||||| ||| |||||||| | || ||||||||||||||||||| | | |||||    
T  46675053 cttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgccgttta 46674954  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  46674953 ctattttggtc 46674943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 22746438 - 22746350
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||||| || || |||||| |||||||||||||||||||||||||  |||| ||| |||||||| | ||||||||||||||||||||||    
T  22746438 ttaatacattatttggtcctttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatctt 22746350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 19279735 - 19279645
Alignment:
Q  88 tagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    ||||||||||| ||| | |||||| ||||||||||||| ||||||| |||| |||| ||| |||||||| | |||||||||||||||||||    
T  19279735 tagacttaatacatcgtttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaat 19279645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 22744743 - 22744853
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| |||||||||||||  ||||||||||  |||| ||| |||||||| |||||||||||||| ||||||||| | | |||||    
T  22744743 cttaatacatcatttggtcccttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgccgttta 22744842  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  22744843 ctattttggtc 22744853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 236
Target Start/End: Original strand, 14107829 - 14107973
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||  ||||||||||||| ||||||| |||| |||| ||| |||||||| | ||||  ||||||| || |||||||   ||| |    
T  14107829 cttaatacatcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttca 14107928  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttta 236  Q
    ||||||||||| | || ||| ||||||| |||||||| |||||||    
T  14107929 ccgttttggtcctctccgttagttttttgatgtctaatattttta 14107973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 236
Target Start/End: Original strand, 14417786 - 14417930
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||  ||||||||||||| ||||||| |||| |||| ||| |||||||| | ||||  ||||||| || |||||||   ||| |    
T  14417786 cttaatacatcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttca 14417885  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttta 236  Q
    ||||||||||| | || ||| ||||||| |||||||| |||||||    
T  14417886 ccgttttggtcctctccgttagttttttgatgtctaatattttta 14417930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 40930441 - 40930521
Alignment:
Q  118 ttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgtttt 198  Q
    |||||||| ||||||| |||| |||| ||| |||||||| |||||||||||||||||||||||| |  |||||||||||||    
T  40930441 ttatttttggttttcactttggtcccctaactataaagtgtttcaatttggtcccataaatcttttgatgtttaccgtttt 40930521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 41516462 - 41516364
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    |||||||||||| |||||  ||||||||||||||||||| | |||| |||| ||| |||||||| | | ||||||||||||||| | |||||| |||||    
T  41516462 ttaatatatcatttggtctcttaacttattttttgttttaattttggtcccctaactataaagtgtcttaatttggtcccataagtattcttccgttta 41516364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 22061914 - 22061825
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| | |||| |||||||||||| ||||||||||||| |||| ||| ||||||   | ||||||||||||||||||||||    
T  22061914 cttaatacatcattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatctt 22061825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 32143294 - 32143253
Alignment:
Q  26 aaataatagtgttgatttttaaaagaattttcaataaatgat 67  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32143294 aaataatagtgttgatttttaaaagaattttcaataaatgat 32143253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 43006382 - 43006471
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||||||| |||| ||| ||| |||| | ||||||||||||| ||| ||||    
T  43006382 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtctt 43006471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 43007768 - 43007679
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||||||||| |||||| | |||||||||||  ||||||||||| |||  ||| |||||||| | ||||||||||||||||| ||||    
T  43007768 cttaatatatcatttggtccttcaacttatttttgattttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtctt 43007679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 17288325 - 17288249
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttc 182  Q
    |||||| ||||||||||||||||||| | |||| |||| ||| |||||||| | ||||||||||||||||| |||||    
T  17288325 tggtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttc 17288249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 43935178 - 43935282
Alignment:
Q  88 tagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctg 187  Q
    ||||||||||||||  | |||||| ||||||||||||| | ||||| |||| |||  ||| |||||||| | ||||||||||| |||||||||||| | |    
T  43935178 tagacttaatatatgctttggtcccttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttggtctcataaatcttctgccg 43935277  T
Q  188 tttac 192  Q
    |||||    
T  43935278 tttac 43935282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 46673512 - 46673576
Alignment:
Q  117 cttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||||| |||||||||||| |||| |||  ||||||| ||||||||||||||||||||||||    
T  46673512 cttatttttggttttcaatttggtcccctaacaataaagtgtttcaatttggtcccataaatctt 46673576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 35315326 - 35315215
Alignment:
Q  107 ggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgt 206  Q
    ||||| |||||||||||| | || ||| ||||||||| ||||||| |||| | ||||||||||||||||| ||||||   |||||| ||||| ||| | |    
T  35315326 ggtcccttaacttattttattttctcagtttgatcccttaattattaagtatgtcaatttggtcccataagtcttctgtcgtttactgttttagtcctct 35315227  T
Q  207 ctgtttgttttt 218  Q
    ||||| ||||||    
T  35315226 ctgttagttttt 35315215  T

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Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 183
Target Start/End: Original strand, 43930312 - 43930407
Alignment:
Q  88 tagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||||||||||||||| |||||| |||||||||||||  |||||| |||| |||| ||| ||| ||   | |||||||||||| |||||||||||    
T  43930312 tagacttaatatatcatttggtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttct 43930407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 1970810 - 1970896
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    ||||||| |||||||||||  |||| |||||||| ||||| | |||| | || ||| |||||||| |||||||||||||||||||||    
T  1970810 cttaatacatcatctggtctcttaatttatttttggtttttactttggttccttaactataaagtgtttcaatttggtcccataaat 1970896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 7146799 - 7146856
Alignment:
Q  114 taacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcc 171  Q
    ||||||||||| ||||||||||||| |||| ||| |||||||| ||||||||||||||    
T  7146799 taacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggtcc 7146856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 7148161 - 7148088
Alignment:
Q  108 gtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||| |||||||||||| ||||||||||||| ||   ||| |||||||| ||||||||||||||| ||||||||    
T  7148161 gtcccttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatctt 7148088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 25532143 - 25532231
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| || ||| ||||||||||||||| |||||||||| |||| ||| |||||||| |||| |||| ||| ||||||||||    
T  25532143 cttaatacatcatttgatcctttaacttattttttg-tttcaatttggtcccctaactataaagtgtttcgatttagtctcataaatctt 25532231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 4857200 - 4857304
Alignment:
Q  94 taatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttacc 193  Q
    ||||| ||||| || ||| ||||||||||||| ||||||| |||| |||| ||| |||||| | | || ||||||||||| ||||||||| | ||||||     
T  4857200 taatacatcatttgatcccttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccgtttact 4857299  T
Q  194 gtttt 198  Q
    |||||    
T  4857300 gtttt 4857304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 10257489 - 10257364
Alignment:
Q  108 gtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtc 207  Q
    |||| |||||||||||| | || ||||||||||||| ||| ||| |||| | ||||||||||||||||| |||| |   ||||||  |||| ||||| ||    
T  10257489 gtcccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttgt--cgtttactattttagtcatttc 10257392  T
Q  208 tgtttgttttttaatgtctaaaattttt 235  Q
    |||| || || |||||||||| ||||||    
T  10257391 tgttagtattctaatgtctaatattttt 10257364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 18801205 - 18801313
Alignment:
Q  85 ttatagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttctt 184  Q
    |||||| ||||||| ||  | |||||| |||||||||||||   ||||| |||| |||| ||| |||||||| | ||||||||||||||||||| | | |    
T  18801205 ttataggcttaatacatgctttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatatacct 18801304  T
Q  185 ctgtttacc 193  Q
    |||||||||    
T  18801305 ctgtttacc 18801313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 178
Target Start/End: Complemental strand, 19848939 - 19848867
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    |||||| ||||||||||||| | ||||| |||| |||| ||| |||||||| | |||||||||||||||||||    
T  19848939 tggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataaat 19848867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 22060460 - 22060572
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| |||||  |||||||||||| |||||| |||||| |||  ||| |||||||| | |||||||||| ||| || |||| | | |||||    
T  22060460 cttaatatatcatttggtcacttaacttattttgtgtttttaatttggtcctctaactataaagtgtctcaatttggttccacaagtcttatgccgttta 22060559  T
Q  192 ccgttttggtcat 204  Q
    |  ||||||||||    
T  22060560 ctattttggtcat 22060572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 33458307 - 33458406
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||| ||||||| |||| |||  ||| |||||||| | |||| || ||||||||| |||||||| |||||    
T  33458307 cttaatacatcatttggtcctttaacttatttttggttttcattttggtcctttaactataaagtgtctcaa-ttagtcccataagtcttcttccgttta 33458405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 33459662 - 33459562
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| | ||||  |||||||||||| ||||||| |||| |||  ||| |||||||| | ||||||||||||||||| ||||| || |||||    
T  33459662 cttaatacatcatttagtcccataacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtcccataagtcttcctccgttta 33459563  T
Q  192 c 192  Q
    |    
T  33459562 c 33459562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 41514995 - 41515136
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| || ||| |||| |||||||| ||||| | |||| | || ||| |||||||| ||||||||||||||||||| ||||| | ||||||    
T  41514995 cttaatatatcatttg-tcccttaatttatttttggttttaattttggttcc-taactataaagtgtttcaatttggtcccataagtcttcatatgttta 41515092  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
    |  || ||||  | || |||  |||||||||||||||| |||||    
T  41515093 ctattgtggttctctccgttaattttttaatgtctaaagttttt 41515136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 48672894 - 48672807
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatc 179  Q
    ||||||| || || |||||  |||| |||||||||||||| |||||| | |||| ||| |||||| | ||||||||||||||||||||    
T  48672894 cttaatacattatttggtctcttaatttattttttgtttttaatttggttccattattgtaaagtgtctcaatttggtcccataaatc 48672807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 181
Target Start/End: Original strand, 48754015 - 48754082
Alignment:
Q  114 taacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||||||||||| | ||| | |||| ||||||||||||||||| ||||||||| |||| |||||||||    
T  48754015 taacttatttttagattttattttggtcccataattataaagtgtttcaatttagtcctataaatctt 48754082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 38406015 - 38406125
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| || || |||||| |||| |||||||| ||||||| |||| |||| ||| |||||||| | ||||  |||| |||||||||||||   |||||    
T  38406015 cttaatacattatttggtcctttaatttatttttggttttcattttggtcccctaactataaagtgtctcaaactggttccataaatcttctgacgttta 38406114  T
Q  192 ccgttttggtc 202  Q
    | |||||||||    
T  38406115 ctgttttggtc 38406125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 45721864 - 45721742
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    ||||||||||||| ||||||| |||| |||| ||| |||||||| | |||||||||| |||||| | ||| || ||||||   | || || | || |||     
T  45721864 ttaacttatttttagttttcattttggtcccctaactataaagtgtctcaatttggttccataagttttcctccgtttactaatgtgatcctctccgtta 45721765  T
Q  213 gttttttaatgtctaaaattttt 235  Q
    ||||||||||||||||| |||||    
T  45721764 gttttttaatgtctaaatttttt 45721742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 233
Target Start/End: Complemental strand, 13446777 - 13446636
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||  ||||||||||||| ||||||| |||| | |   || |||| ||| | |||||||||||||||||||||||| | |||||    
T  13446777 cttaatacatcatttggtcacttaacttatttttggttttcactttggttcttcaactatatagtgtctcaatttggtcccataaatcttctgccgttta 13446678  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattt 233  Q
       | |||||| | || ||| |||||||||||| ||| ||||    
T  13446677 ttatattggtcctctccgttagttttttaatgtgtaacattt 13446636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 14206691 - 14206800
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    |||| |||||||| ||||||| |||| || | ||| |||||| | |||||||||||||| |||||||||||   ||||||  ||||| |||| || |||     
T  14206691 ttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgtta 14206790  T
Q  213 gttttttaat 222  Q
    ||||||||||    
T  14206791 gttttttaat 14206800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 14215381 - 14215490
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    |||| |||||||| ||||||| |||| || | ||| |||||| | |||||||||||||| |||||||||||   ||||||  ||||| |||| || |||     
T  14215381 ttaatttatttttggttttcactttggtcgcctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgtta 14215480  T
Q  213 gttttttaat 222  Q
    ||||||||||    
T  14215481 gttttttaat 14215490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 26406157 - 26406234
Alignment:
Q  127 gttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcat 204  Q
    |||||||||||||||||||||  ||||||| | |||||||| || ||||| |||||| | ||||| | ||||||||||    
T  26406157 gttttcaatttgatcccataacgataaagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcat 26406234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 27897710 - 27897775
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    |||||||||||| | || | |||||||| || |||||||||| | |||||||||||||||||||||    
T  27897710 ttaacttattttattttcttaatttgattccttaattataaaatgtttcaatttggtcccataaat 27897775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 43936265 - 43936168
Alignment:
Q  86 tatagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||| ||||||||||  | |||||| ||||||||||||| | ||||| |||| |||  ||| |||||||||| | ||||||||| ||||| ||||||    
T  43936265 tataggcttaatatatagtttggtcccttaacttatttttggatttcattttggtcctctaactataaagtttcttaatttggtctcataattcttct 43936168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 44553223 - 44553280
Alignment:
Q  115 aacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    ||||||||| |||||||||||||| || ||||| | |||| |||||||||||||||||    
T  44553223 aacttatttgttgttttcaatttggtctcataactctaaattttttcaatttggtccc 44553280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 28325070 - 28325153
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataa 176  Q
    ||||||| ||||| |||||| ||||||||||||| ||||| | |||| |||| ||| | |||||| | |||||||||||||||||    
T  28325070 cttaatacatcatttggtcc-ttaacttatttttggttttaattttggtcccctaactttaaagtatctcaatttggtcccataa 28325153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 35128282 - 35128226
Alignment:
Q  91 acttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataa 147  Q
    |||||||| ||||| |||||| ||||||||||||| |||||||||||| ||| ||||    
T  35128282 acttaatacatcatttggtcccttaacttatttttggttttcaatttggtcctataa 35128226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 7347325 - 7347250
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||||| |||||||| |||| | ||| | |||| | ||||||||||||||| | |||||||||||| |||||||||    
T  7347325 tggtcccttaacttaattttagattttattttggttccataattataaagtgtctcaatttggtcctataaatctt 7347250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 36703070 - 36702959
Alignment:
Q  92 cttaatatatcatctggtccattaacttatttttt-gttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttt 190  Q
    ||||||| ||||| |||||| |||||||||||||| | ||||| |||  |||| ||| | |||| | | ||||||||||||||||||| |||| | ||||    
T  36703070 cttaatacatcatttggtcccttaacttattttttggatttcattttagtcccctaaatttaaactgtctcaatttggtcccataaatattctgccgttt 36702971  T
Q  191 accgttttggtc 202  Q
    ||  ||||||||    
T  36702970 actattttggtc 36702959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 38408396 - 38408313
Alignment:
Q  89 agacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||||||||||||| |||||| |||| ||||||||  |||||| |||| |||  ||| |||||||| | |||| ||||||||    
T  38408396 agacttaatatatcatttggtcccttaatttatttttgattttcactttggtcctctaactataaagtgtctcaaattggtccc 38408313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 1885346 - 1885280
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| |||||||||||||   ||||| |||| |||| |||||||||||| | |||||||||||||    
T  1885346 tggtcccttaacttatttttgaatttcattttggtcccttaattataaagtatctcaatttggtccc 1885280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 30222657 - 30222723
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| |||| |||||||| | ||||| |||| |||| |||||||||||| | |||||||||||||    
T  30222657 tggtcctttaatttatttttggatttcattttggtcccctaattataaagtatctcaatttggtccc 30222723  T

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Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 36702788 - 36702874
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| ||||||||||||| | ||||| |||| |||| ||| | |||| | | ||||||||||||||||||| |||| | ||||||    
T  36702788 tggtcccttaacttatttttagatttcattttggtcccttaactttaaactgtctcaatttggtcccataaatattctgccgtttac 36702874  T

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Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 41618604 - 41618539
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcc 171  Q
    |||||| ||||||||||||| | ||||| |||| |||| |||||||||||| | | ||||||||||    
T  41618604 tggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctaaatttggtcc 41618539  T

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Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 44114780 - 44114723
Alignment:
Q  86 tatagacttaatatatcatctggtccattaacttattttttgttttcaatttgatccc 143  Q
    ||||| ||||||| ||||| |||||| ||||||||||||| ||||||| |||| ||||    
T  44114780 tataggcttaatacatcatttggtcccttaacttatttttagttttcattttggtccc 44114723  T

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Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 90 - 244
Target Start/End: Original strand, 13929290 - 13929445
Alignment:
Q  90 gacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtt 189  Q
    ||||||||| ||||| |||||| ||||||||||||| |||||||||||| |||| ||| |||||||| | ||||||||||||| |||||||||||| |||    
T  13929290 gacttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtcccgtaaatcttcttccgtt 13929389  T
Q  190 taccgttttggtcatgtctgtttgttttttaatgtctaaaattttt-atattgttt 244  Q
    || | | |||||| |||| |||| ||||||||||||||| |||||| |||||||||    
T  13929390 tatcatcttggtcctgtccgtttattttttaatgtctaatatttttgatattgttt 13929445  T

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Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 93 - 247
Target Start/End: Original strand, 49139799 - 49139954
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| ||||| |||||| ||||||||||||| ||||||  |||| |||||||| |||||||| | ||||||||||| |||||||||||  | ||||||    
T  49139799 ttaatacatcatttggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtctcataaatcttccgcagtttac 49139898  T
Q  193 cgttttggtcatgtctgtttgttttttaatgtctaaaatttt-tatattgtttcaa 247  Q
      ||||||| || || ||| |||||||||||| ||| ||||| |||||| ||||||    
T  49139899 tattttggtaatctccgttagttttttaatgtttaatattttatatattatttcaa 49139954  T

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Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 25785960 - 25786054
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||| ||||||| ||||| |||||| ||||||||||||| |||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||    
T  25785960 ataggcttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatctt 25786054  T

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Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 14071322 - 14071196
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| |||| |||||||| |||||||||||| |||  ||| |||||||| | ||||||||||||||||| ||||||   |||||    
T  14071322 cttaatacatcatttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtcgttta 14071223  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
    || |||||||| | || ||||||||||    
T  14071222 ccattttggtcctttccgtttgttttt 14071196  T

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Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 25787283 - 25787194
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||||||| |||| ||| |||||||| | ||||||||||| ||||||||||    
T  25787283 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatctt 25787194  T

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Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 13641275 - 13641366
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcat 204  Q
    ||||||||||||| ||||||| |||| |||| ||| |||||||| | |||||||||||||||||||||||| | ||||||  ||||||||||    
T  13641275 ttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcat 13641366  T

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Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 95 - 218
Target Start/End: Complemental strand, 13930791 - 13930668
Alignment:
Q  95 aatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccg 194  Q
    |||| ||||| |||||| ||||||||||||| |||||||||||| |||  ||| |||||||| | ||||||||||||||||| |||| |   |||||||     
T  13930791 aatacatcatttggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttacca 13930692  T
Q  195 ttttggtcatgtctgtttgttttt 218  Q
    |||||||| | || ||||||||||    
T  13930691 ttttggtcctttccgtttgttttt 13930668  T

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Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 181
Target Start/End: Original strand, 48467266 - 48467347
Alignment:
Q  100 atcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||| |||||| |||||||||||||||||||||||||| | || ||| |||||||| ||||||||||||| | ||||||||    
T  48467266 atcatttggtcccttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatttggtctcttaaatctt 48467347  T

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Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 50679926 - 50679797
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| ||||||||||||| ||||| | |||| |||| ||| |||||||| | ||||||||||||||||| ||||| || ||||||   | ||||| |     
T  50679926 tggtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctc 50679827  T
Q  206 tctgtttgttttttaatgtctaaaattttt 235  Q
    || ||| ||||||||||||||||| |||||    
T  50679826 tccgttagttttttaatgtctaaatttttt 50679797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 21276991 - 21277091
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| || || |||||| ||||||||||||| |||||||||||| |  | ||| |||||||| | |||||||||||||||||||||||| | |||||    
T  21276991 cttaatacattatttggtcccttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttctgccgttta 21277090  T
Q  192 c 192  Q
    |    
T  21277091 c 21277091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 16218603 - 16218508
Alignment:
Q  86 tatagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||| ||||||| ||||| | |||| |||| |||||||| |||||| || ||||||| ||| |||||||| | ||||||||||||||||||||||    
T  16218603 tataggcttaatagatcatttagtcccttaatttatttttagttttctatctgatcccctaactataaagtatctcaatttggtcccataaatctt 16218508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 19464619 - 19464709
Alignment:
Q  114 taacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcat 204  Q
    ||||||||||| | |||||| |||| |||| |||||||||||| |||||||||||| ||| ||||||||| | ||||||  ||||||||||    
T  19464619 taacttattttattttttcagtttggtcccttaattataaagtgtttcaatttggttccacaaatcttctgccgtttactattttggtcat 19464709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 47136806 - 47136696
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||| | |||| ||| |||||||| | ||||||||||  |||||||||| | | |||||    
T  47136806 cttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgttta 47136707  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  47136706 ctattttggtc 47136696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 181
Target Start/End: Complemental strand, 26056270 - 26056177
Alignment:
Q  88 tagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||||||| ||  | |||||| ||||||||||||| | ||||| |||| |||| ||| |||||||| | ||||||||||||||||||||||    
T  26056270 tagacttaatacatactttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatctt 26056177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 47410981 - 47411070
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| || || |||||| |||| ||||||||  |||||||||||||||| ||| |||||||| | ||||||||||| ||||||||||    
T  47410981 cttaatacataatttggtcccttaaattatttttgattttcaatttgatcccctaactataaagtgtctcaatttggtctcataaatctt 47411070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 47411567 - 47411478
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||| ||||||||||||  |||||| ||||| | || ||| |||||||| | ||||||||||||||||||||||    
T  47411567 cttaatacatcatttggtcccttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtcccataaatctt 47411478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 2973126 - 2973038
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||||| || || ||| ||||||||||||||||||||| |||  |||| |||||||||||| | |||||||||||| |||| ||||    
T  2973126 ttaatatattatttgatcccttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtcctataagtctt 2973038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 3979418 - 3979322
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||| ||||||||||||| | ||||| |||| |||| ||| |||||||| | ||||||||||||||||| |||||| | ||||||  ||||||||    
T  3979418 tggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtc 3979322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 239
Target Start/End: Original strand, 47560131 - 47560283
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttct 186  Q
    |||| ||||||| ||||| |||||| ||| ||||||||   |||||| |||| |||| ||| |||||||| |||||||||| |||  ||||| |||| |     
T  47560131 ataggcttaatacatcatttggtcccttaccttattttcgattttcactttggtcccctaactataaagtgtttcaatttgatcctttaaatattctgcc 47560230  T
Q  187 gtttaccgttttggtcatgtctgtttgttttttaatgtctaaaatttttatat 239  Q
    |||||| ||||||||||| || |||  |||||| |||| ||| ||||| ||||    
T  47560231 gtttactgttttggtcatctccgttaattttttgatgtataatattttaatat 47560283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 52181424 - 52181312
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| || || |||||| |||||||||||||| ||||||||||| |||  ||| |||||||| | ||||||| ||| |||||||||| |  ||||||    
T  52181424 cttaatagataatttggtcctttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgttgttta 52181325  T
Q  192 ccgttttggtcat 204  Q
    |  ||||||||||    
T  52181324 ctattttggtcat 52181312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 40110750 - 40110631
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    |||||||||||| | || ||| ||||||||| ||| ||| |||| | ||||||||||||||||| ||||| ||||||||    | ||||| | ||||||     
T  40110750 ttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttggtcccataagtcttcctctgtttattaatgtggtcctctctgtta 40110651  T
Q  213 gttttttaatgtctaaaatt 232  Q
    |||||||||||| |||||||    
T  40110650 gttttttaatgtataaaatt 40110631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 49141615 - 49141489
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||| | |||||| |||| |||||||| ||||||| || |||||| ||| ||| |||| |||||| |||||||||||| | |||| | |||||    
T  49141615 cttaatacatcgtttggtcctttaatttatttttggttttcacttcgatcccttaactattaagtgtttcaaattggtcccataatttttctgccgttta 49141516  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
    || |||| ||||| || ||| ||||||    
T  49141515 ccattttagtcatctccgttagttttt 49141489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 14764239 - 14764352
Alignment:
Q  105 ctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcat 204  Q
    ||||||| |||||||||||| | |||| | ||||||||| ||||||| |||| | | ||||||||| ||||| ||||||   |||||| ||||| |||||    
T  14764239 ctggtcccttaacttattttatttttttagtttgatcccttaattattaagtgtgttaatttggtctcataagtcttctgtcgtttactgttttagtcat 14764338  T
Q  205 gtctgtttgttttt 218  Q
     |||||| ||||||    
T  14764339 ctctgttagttttt 14764352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 192
Target Start/End: Complemental strand, 24517718 - 24517633
Alignment:
Q  107 ggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    ||||| |||||||||||| | || ||| ||| ||||| ||||| | |||| | ||||||||||||||||||||||| |||||||||    
T  24517718 ggtcccttaacttattttattttctcagtttaatcccttaatttttaagtgtgtcaatttggtcccataaatcttcctctgtttac 24517633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 26054916 - 26054985
Alignment:
Q  114 taacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    |||||||||||| | ||||| |||| |||| ||| |||||||| |||||||||||| |||||||||||||    
T  26054916 taacttatttttggatttcattttggtcccctaactataaagtgtttcaatttggttccataaatcttct 26054985  T

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Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 36511434 - 36511309
Alignment:
Q  108 gtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtc 207  Q
    |||| |||| ||||||| | || ||| |||| |||| ||| |||||||| | ||||||||||||||||||||||||   ||||||  |||||||||| ||    
T  36511434 gtcccttaatttattttattttctcagtttggtcccttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttggtcatctc 36511335  T
Q  208 tgtttgttttttaatgtctaaaattt 233  Q
     ||| ||||| |||||| ||| ||||    
T  36511334 cgttagttttctaatgtataatattt 36511309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 14390269 - 14390365
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||| ||||||||||||||  ||||| |||| |||  ||| |||||| | | |||||||||| ||||||||||||||  ||||||| ||||||||    
T  14390269 tggtcccttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataaatcttctttcgtttaccattttggtc 14390365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 201
Target Start/End: Original strand, 36509829 - 36509917
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggt 201  Q
    |||||||||||| | || ||| |||| |||| ||| |||||||| |||||||||||| ||||||||||||| | ||||||  |||||||    
T  36509829 ttaacttattttattttctcagtttggtcccttaactataaagtgtttcaatttggttccataaatcttctgccgtttactattttggt 36509917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 42248410 - 42248335
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||||| | ||||||||||| | ||||| |||| |||||||| |||||||| | |||||||||||| |||||||||    
T  42248410 tggtccttcaacttatttttggatttcattttggtcccataactataaagtgtctcaatttggtcctataaatctt 42248335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 199
Target Start/End: Original strand, 9633773 - 9633879
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| || || |||||| ||||||||||||| ||||||| |||| |||| ||| |||||||| | ||||||||||   ||||||||||  | ||||||    
T  9633773 ttaatacataatttggtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggttatataaatcttcaaccgtttac 9633872  T
Q  193 cgttttg 199  Q
     ||||||    
T  9633873 agttttg 9633879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 233
Target Start/End: Original strand, 9592271 - 9592376
Alignment:
Q  128 ttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgtttgttttttaatgtcta 227  Q
    |||||| |||| |||| ||| |||||||| |||||||||| ||||||||||||| |   ||||||  ||||| |||| || |||  ||||||||||||||    
T  9592271 ttttcactttggtcccctaactataaagtgtttcaatttgatcccataaatcttttgtcgtttactattttgatcatttccgttaattttttaatgtcta 9592370  T
Q  228 aaattt 233  Q
    | ||||    
T  9592371 acattt 9592376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 183
Target Start/End: Original strand, 3978036 - 3978132
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    |||| ||||||| ||||| |||||| |||||||||||||   ||||| |||| |||  ||| |||||||| | |||||||| |||||||| ||||||    
T  3978036 ataggcttaatacatcatttggtcccttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttct 3978132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 179
Target Start/End: Complemental strand, 14171344 - 14171300
Alignment:
Q  135 tttgatcccataattataaagtttttcaatttggtcccataaatc 179  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||    
T  14171344 tttgatcccttaattataaaatgtttcaatttggtcccataaatc 14171300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 16217458 - 16217526
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||||||||| ||||| |||||||||   ||| |||||||| | |||||||||||| |||||||||    
T  16217458 ttaacttatttttggtttttaatttgatcatctaactataaagtgtctcaatttggtcctataaatctt 16217526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 33793776 - 33793840
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagt 156  Q
    ||||||| ||||| || ||| ||||||||||||| ||||||| |||| |||| ||||||||||||    
T  33793776 cttaatacatcatttgatcccttaacttatttttggttttcactttggtcccctaattataaagt 33793840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 47511364 - 47511448
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataa 176  Q
    ||||||||||  | |||||| |||||||||||||   ||||| ||||||||| ||||| |||| | | |||||||||||||||||    
T  47511364 cttaatatatgctttggtcccttaacttatttttgaatttcattttgatcccttaattttaaactgtctcaatttggtcccataa 47511448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 51424262 - 51424326
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtc 170  Q
    |||||| ||||||||||||| | ||||| |||| |||| |||||||||||| | |||||||||||    
T  51424262 tggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtc 51424326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 29264870 - 29264948
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||||||||| |||||| |||||||||||||  |||||||||||||||  ||| |||||| | | | |||||||||||    
T  29264870 ttaatatatcatttggtcc-ttaacttatttttgattttcaatttgatcctctaactataaaatgtcttaatttggtccc 29264948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 38451549 - 38451600
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatccc 143  Q
    ||||||| ||||| |||||| |||||||||||| ||||||||||||| ||||    
T  38451549 cttaatacatcatttggtcccttaacttattttatgttttcaatttggtccc 38451600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 40109379 - 40109458
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||||||||| | || ||| ||||||||| ||| | | |||| | ||||||||||||||||||||||| || ||||||    
T  40109379 ttaacttattttattttctcagtttgatcccttaacttttaagtgtgtcaatttggtcccataaatcttcatccgtttac 40109458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 51725340 - 51725483
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    |||||||||||  | ||||| ||||||||||||   || ||| |||  |||  ||| |||||||| | |||||||| ||| |||||  |||| | |||||    
T  51725340 cttaatatatcccccggtcccttaacttattttaatttctcagtttagtcctttaactataaagtgtctcaatttgatcctataaaatttctgccgttta 51725439  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
     | ||||||||||||| |||| ||||||||| ||||| ||||||    
T  51725440 tcattttggtcatgtccgtttattttttaatctctaatattttt 51725483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 52741482 - 52741549
Alignment:
Q  89 agacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagt 156  Q
    |||||||||||||||| |||||| ||||||||||||| ||||| | |||| |||  ||| ||||||||    
T  52741482 agacttaatatatcatttggtcccttaacttatttttcgtttttattttggtcctctaactataaagt 52741549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 2238083 - 2238017
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| ||||||||||||  | ||||| |||| |||||||| |||||||| | |||||||||||||    
T  2238083 tggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtccc 2238017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 34653435 - 34653513
Alignment:
Q  95 aatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccca 173  Q
    |||| ||||| |||||| ||||||||||||  ||||||| |||| |||| ||| |||||||| | |||||||| |||||    
T  34653435 aatacatcatttggtcccttaacttattttcggttttcactttggtcccttaactataaagtgtctcaatttgatccca 34653513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 38451827 - 38451781
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttg 138  Q
    ||||||| ||||| |||||  ||||||||||||||||||||||||||    
T  38451827 cttaatacatcatttggtcatttaacttattttttgttttcaatttg 38451781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 44340168 - 44340102
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| ||| ||||||||| | ||||| ||||||||| |||||||||||| | ||| |||||||||    
T  44340168 tggtcccttatcttatttttggatttcattttgatcccctaattataaagtgtctcattttggtccc 44340102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 52439404 - 52439358
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttg 138  Q
    ||||||| ||||| |||||| |||||||||||| |||||||||||||    
T  52439404 cttaatacatcatttggtcccttaacttattttctgttttcaatttg 52439358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 48494367 - 48494310
Alignment:
Q  115 aacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    ||||||||| |||||||||||||| || ||||| | |||| |||| ||||||||||||    
T  48494367 aacttatttgttgttttcaatttggtctcataactctaaatttttccaatttggtccc 48494310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 13568550 - 13568486
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtc 170  Q
    |||||| ||||||||||||| | ||| | |||||| || || ||||||||| |||||||||||||    
T  13568550 tggtcccttaacttatttttagattttattttgattccctatttataaagtgtttcaatttggtc 13568486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 44977218 - 44977282
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagt 156  Q
    ||||||| || || |||||| ||||||||||||| ||||||| |||| |||| ||| ||||||||    
T  44977218 cttaatacattatttggtcccttaacttatttttggttttcactttggtcccctaactataaagt 44977282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 5e-34; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 31740377 - 31740248
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| |||||||||||||||||||||||||| |||| ||| |||||||| | |||||||||||||||||||||| | | ||||||| |||||||| |     
T  31740377 tggtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtccta 31740278  T
Q  206 tctgtttgttttttaatgtctaaaattttt 235  Q
    || |||||||||||||||||||| ||||||    
T  31740277 tccgtttgttttttaatgtctaatattttt 31740248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 31738360 - 31738470
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||| | |||||| ||||||||||||| |||||||||||| |||| ||| |||||||| ||||||||||||||||||| |||||| | |||||    
T  31738360 cttaatacatcctttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcggttta 31738459  T
Q  192 ccgttttggtc 202  Q
    || ||||||||    
T  31738460 ccattttggtc 31738470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 8412435 - 8412325
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| || || |||||| |||||||||||||||||||||||||  |||| ||| |||||||| | |||||||||||||||||||||| | | |||||    
T  8412435 cttaatacattatttggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgttta 8412336  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  8412335 ctattttggtc 8412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 33807681 - 33807829
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttct 186  Q
    |||| ||||||| || || || ||| ||||||||||||| ||||||| |||| |||| ||| |||||||| | |||||||| | |||||||| |||| |     
T  33807681 ataggcttaatacattatttgatcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaatttgatgccataaattttctgcc 33807780  T
Q  187 gtttaccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
    |||||||||||||||| | || |||  ||||||||||||| | ||||||    
T  33807781 gtttaccgttttggtcctctccgttaattttttaatgtctgatattttt 33807829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 293760 - 293649
Alignment:
Q  92 cttaatatatcatctggtccattaacttatttttt-gttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttt 190  Q
    |||||||||| || |||||  |||| ||||||||| ||||||||||||||| | |||||||||||| ||||||||||||| ||||| ||||||   ||||    
T  293760 cttaatatattatttggtctcttaatttatttttttgttttcaatttgatctcctaattataaagtgtttcaatttggtctcataagtcttctgtcgttt 293661  T
Q  191 accgttttggtc 202  Q
    ||| ||||||||    
T  293660 accattttggtc 293649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 22300001 - 22299910
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcat 204  Q
    ||||||||||||| ||||||| |||| |||| ||| |||||||| | |||||||||||||||||||||||| | ||||||  ||||||||||    
T  22300001 ttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcat 22299910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 27440294 - 27440184
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| |||||||||||||   ||||| ||||||||| ||| | |||| | | |||||||||||||||||||||||||| |||||    
T  27440294 cttaatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgttta 27440195  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  27440194 ctattttggtc 27440184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 33802136 - 33802026
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||| ||||||| |||| |||| ||| |||||||| | | |||||| |||||||||||||||   |||||    
T  33802136 cttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgtagttta 33802037  T
Q  192 ccgttttggtc 202  Q
    |||| ||||||    
T  33802036 ccgtattggtc 33802026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 5311276 - 5311365
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||||||  |||| ||| |||||||| | |||||||||||| |||||||||    
T  5311276 cttaatacatcatttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatctt 5311365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 9927603 - 9927688
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaa 177  Q
    ||||||| | |||||||||| ||||||||||||||||||| | |||| |||| ||| |||||||| | ||||||||||||||||||    
T  9927603 cttaatacagcatctggtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataaa 9927688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 221
Target Start/End: Original strand, 27438788 - 27438916
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| ||||| |||||| ||||||||||||| | ||||| |||| |||  ||| |||||||| | |||||||| |||||||||| |||| | ||||||    
T  27438788 ttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttac 27438887  T
Q  193 cgttttggtcatgtctgtttgttttttaa 221  Q
      |||||||||| || |||  ||||||||    
T  27438888 tcttttggtcatctccgttaattttttaa 27438916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 18139606 - 18139496
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||  ||||||| ||||||||  ||| |||||||| | |||| |||||||| || ||||||| | |||||    
T  18139606 cttaatacatcatttggtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtcccttatatcttctgccgttta 18139507  T
Q  192 ccgttttggtc 202  Q
      |||||||||    
T  18139506 ttgttttggtc 18139496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 34084251 - 34084162
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||||| ||||| |||||| ||||||||||| | ||||||| |||| |||  ||| |||||||| | ||||||||||| ||||||||||||    
T  34084251 cttaatacatcatttggtcccttaacttatttctggttttcactttggtcc--taaatataaagtgtctcaatttggtctcataaatcttct 34084162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 683659 - 683608
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatccc 143  Q
    ||||||||||||| |||||| |||||||||||| ||||||||||||| ||||    
T  683659 cttaatatatcatttggtcctttaacttattttctgttttcaatttggtccc 683608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 8411082 - 8411193
Alignment:
Q  91 acttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttt 190  Q
    |||||||| ||||| | || | ||||||||||||| |||||||||||  |||| ||| |||||||| | |||||||||||  ||||||||| | | ||||    
T  8411082 acttaatacatcatttagttccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgttt 8411181  T
Q  191 accgttttggtc 202  Q
    ||  ||||||||    
T  8411182 actattttggtc 8411193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 96157 - 96300
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||||||||||||||||   ||||||||||| |||| ||| |||||||| | |||||||| ||| ||||||||||||| |||||    
T  96157 cttaatacatcatttggtccattaacttattttcgattttcaatttggtcccctaactataaagtgtctcaatttgatccgataaatcttcttccgttta 96256  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
    || ||||||||||||| || ||||||||||| ||||| ||||||    
T  96257 ccattttggtcatgtccgtgtgttttttaatatctaatattttt 96300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 96934 - 96855
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcc 171  Q
    ||||||| ||||| || ||| ||||||||||||| ||||||||||||||||| |||  ||||| | | ||||||||||||    
T  96934 cttaatacatcatttgatcccttaacttatttttggttttcaatttgatcccctaacaataaactgtctcaatttggtcc 96855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 236
Target Start/End: Original strand, 27408760 - 27408904
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||  |||||||||||| ||   ||| |||||||| | |||||||||||||||||||||||||| |||||    
T  27408760 cttaatacatcatttggtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtcccataaatcttcttccgttta 27408859  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttta 236  Q
    || ||||||||| ||| || ||||||||||| ||||| |||||||    
T  27408860 ccattttggtcacgtccgtgtgttttttaatatctaatattttta 27408904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 251
Target Start/End: Complemental strand, 28103597 - 28103445
Alignment:
Q  100 atcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttg 199  Q
    ||||| |||||| ||||||||||||| | ||||| |||| |||| ||| |||||||| | |||||||||||||||||  ||||| | ||||||| |||||    
T  28103597 atcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataagacttctgccgtttaccattttg 28103498  T
Q  200 gtcatgtctgtttgttttttaatgtctaaaattttt-atattgtttcaaccat 251  Q
    ||| | || |||||||||||||||| ||  |||||| ||||||||||||||||    
T  28103497 gtcctttccgtttgttttttaatgtttactatttttgatattgtttcaaccat 28103445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 44305098 - 44304968
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| || | |||||||||||||||||||||||||||| |||| ||| || ||||| | |||||||||||| ||||||||||  |||||||    
T  44305098 cttaatatatcatttgattcattaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttccgctgttta 44304999  T
Q  192 ccgttttggtcatgtctgtttgttttttaat 222  Q
    |  |||||||||| || |||  |||||||||    
T  44304998 ctattttggtcatctccgttaattttttaat 44304968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 106 - 251
Target Start/End: Original strand, 52658922 - 52659068
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| |||||||||||||| |||||| |||| |||| ||| |||||| | |||||||||||| | ||||||||||| | |||||||  ||| |||||     
T  52658922 tggtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggttctataaatcttctgccgtttaccagtttagtcatt 52659021  T
Q  206 tctgtttgttttttaatgtctaaaattttt-atattgtttcaaccat 251  Q
    || ||||||||||||||||  || |||||| ||||||||||||||||    
T  52659022 tccgtttgttttttaatgttaaatatttttgatattgtttcaaccat 52659068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 21104429 - 21104269
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| |||| | |||| |||||||||||||||| |||| |||| ||| |||||||| | ||||||||||| ||||  ||||||   |||||    
T  21104429 cttaatatatcatttggttccttaaattattttttgttttcattttggtcccctaactataaagtgtctcaatttggtctcatatgtcttctgtcgttta 21104330  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt-atattgtttcaaccat 251  Q
    || |||||||| | || ||||| |||||||||| ||  |||||| ||||||||||||||||    
T  21104329 ccattttggtcctttccgtttgctttttaatgtttactatttttgatattgtttcaaccat 21104269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 33377483 - 33377373
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| |||||||||||||  ||||||||||| |||| ||| |||||||| | |||||||||||||||||||||||| | |||||    
T  33377483 cttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgttta 33377384  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  33377383 ctattttggtc 33377373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 37560418 - 37560329
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||||||| |||| ||| |||||||| | ||||||||||||||||||||||    
T  37560418 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatctt 37560329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 46796145 - 46796002
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||| | |||||| ||||||||||||| ||||| | |||| |||| ||| |||||||| | ||||||||||||||||| ||||| || |||||    
T  46796145 cttaatacatcgtttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgttta 46796046  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
    |  || ||||| | || ||| ||||||||||||||||| |||||    
T  46796045 ctattgtggtcctctccgttagttttttaatgtctaaatttttt 46796002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 236
Target Start/End: Original strand, 11113739 - 11113883
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||  ||||||||||||  ||||||| |||  |||| ||| |||||||| | ||||||||||| ||||| |||||| | |||||    
T  11113739 cttaatacatcatttggtcacttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgccgttta 11113838  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttta 236  Q
    || |||||||||| || ||| ||||||  |||||||| |||||||    
T  11113839 ccattttggtcatttccgttagtttttagatgtctaatattttta 11113883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 15786949 - 15787033
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataa 176  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||| |||| ||| |||||| | | |||||||||||||||||    
T  15786949 cttaatacatcatttggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtcccataa 15787033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 251
Target Start/End: Original strand, 31711089 - 31711249
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||| | ||||| |||| |||  ||| |||||||| | ||||||||||| ||||| |||| |   |||||    
T  31711089 cttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataagtcttatgtcgttta 31711188  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt-atattgtttcaaccat 251  Q
    || ||||| || | || |||||||||||||||| ||  |||||| ||||||||||||||||    
T  31711189 ccattttgatcctttccgtttgttttttaatgtttactatttttgatattgtttcaaccat 31711249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 183
Target Start/End: Original strand, 33376215 - 33376306
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||||| ||||| |||||  ||||||||||||| |||||||||||  | || |||||||||||| | ||||||||||||||||||||||||    
T  33376215 cttaatacatcatttggtctcttaacttatttttggttttcaatttagtgccctaattataaagtgtctcaatttggtcccataaatcttct 33376306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 202
Target Start/End: Complemental strand, 55953972 - 55953861
Alignment:
Q  91 acttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttt 190  Q
    |||||||||||||| || ||| |||||||||||||  ||||||||||| |||||||| |||||| | | ||||||||||||| |||||||| | | ||||    
T  55953972 acttaatatatcatttgatcccttaacttatttttgattttcaatttggtcccataactataaaatgtctcaatttggtcccgtaaatcttatgccgttt 55953873  T
Q  191 accgttttggtc 202  Q
    ||  ||||||||    
T  55953872 actattttggtc 55953861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 27410800 - 27410692
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||  |||||||| |||| ||||||||||| ||||| ||| |||||||| | |||||||||||| ||||||||||||| |||||    
T  27410800 cttaatacatcatttggtctcttaacttaattttagttttcaatttaatccc-taactataaagtgtctcaatttggtcc-ataaatcttcttccgttta 27410703  T
Q  192 ccgttttggtc 202  Q
    || ||||||||    
T  27410702 ccattttggtc 27410692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 1273550 - 1273463
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||||||||||| |||||| ||||||||||||| ||||| |||||| |||| ||| |||||||| | ||||||||||||||||| ||||    
T  1273550 ttaatatatcatttggtcccttaacttatttttggtttt-aatttggtcccctaactataaagtgtctcaatttggtcccataagtctt 1273463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 11115099 - 11114991
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| ||||||||||||  ||||||| |||| |||| ||| |||||||| | ||||||||||||||||| ||||||   |||||    
T  11115099 cttaatacatcatttggtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctgtcgttta 11115000  T
Q  192 ccgttttgg 200  Q
    || ||||||    
T  11114999 ccattttgg 11114991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 236
Target Start/End: Complemental strand, 15787621 - 15787477
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| |  | | |||| |||||||||||||||| |||| |||| ||| |||||||| | ||||||||||||||||| | || | | |||||    
T  15787621 cttaatatatcatttttttccttaatttattttttgttttcattttggtcccctaactataaagtgtctcaatttggtcccataacttttttgccgttta 15787522  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttta 236  Q
    || |||||||| | ||  ||  ||||||||||||||| |||||||    
T  15787521 ccattttggtcctctccattaattttttaatgtctaatattttta 15787477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 202
Target Start/End: Original strand, 35787815 - 35787903
Alignment:
Q  114 taacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||||||||| ||||||| |||| |||  ||| |||||| | ||||||||||||||||||||||||||   ||||||||||||||||    
T  35787815 taacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtcccataaatcttctgtcgtttaccgttttggtc 35787903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 47668716 - 47668590
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| |||||||||||| |||||||| |||| |||| ||| |||||||| | |||| |||||||| || ||| ||| | |||||    
T  47668716 cttaatacatcatttggtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatctgccgttta 47668617  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
      ||||||||| | |||||| ||||||    
T  47668616 ttgttttggtcctctctgttagttttt 47668590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 34439763 - 34439638
Alignment:
Q  108 gtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtc 207  Q
    |||| |||||||||||| | || ||| | || |||| ||| |||||| | |||||||||||||||||||||||||| | ||||||  |||||||||| ||    
T  34439763 gtcccttaacttattttattttctcagtgtggtcccttaactataaaatgtttcaatttggtcccataaatcttctgccgtttactattttggtcatctc 34439664  T
Q  208 tgtttgttttttaatgtctaaaattt 233  Q
     ||| ||||| |||||| ||| ||||    
T  34439663 cgttagttttctaatgtataatattt 34439638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 37558995 - 37559080
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaa 177  Q
    ||||||| ||||| |||| | ||||||||||||| |||||||||||| |||| ||| |||||| | | ||||||||||||||||||    
T  37558995 cttaatacatcatttggttccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaa 37559080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 15446775 - 15446679
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||| ||||||||||||| | ||||| |||| ||   |||||||||||| ||||||||||||||||||||| |||| | ||||||  ||||||||    
T  15446775 tggtcccttaacttatttttggatttcattttggtcatctaattataaagtgtttcaatttggtcccataaattttctaccgtttactattttggtc 15446679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 48207836 - 48207736
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||  | |||||| ||||||||||||||||||||| |||| || | |||||||||||| | |||||||||||  |||| |||||| | |||||    
T  48207836 cttaatatatgctttggtcctttaacttattttttgttttcattttggtctcctaattataaagtgtctcaatttggtcatataactcttctaccgttta 48207737  T
Q  192 c 192  Q
    |    
T  48207736 c 48207736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 26393245 - 26393138
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| || || |||||| |||||||||||||| |||| | ||||||||  ||| |||||||| | ||||||||||||||||| ||||||   ||||||    
T  26393245 ttaatacatgatttggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataactcttctgtcgtttac 26393146  T
Q  193 cgttttgg 200  Q
    | ||||||    
T  26393145 cattttgg 26393138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 235
Target Start/End: Complemental strand, 50531859 - 50531732
Alignment:
Q  108 gtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtc 207  Q
    |||| |||||||||||| | || ||||||||||||| ||| ||| |||| | ||||||||||||||||| |||| |   ||||||  |||| ||||| ||    
T  50531859 gtcccttaacttattttattttctcaatttgatcccttaactattaagtgtctcaatttggtcccataactcttttgtcgtttactattttagtcatttc 50531760  T
Q  208 tgtttgttttttaatgtctaaaattttt 235  Q
    |||| || || |||||||||| ||||||    
T  50531759 tgttagtattctaatgtctaatattttt 50531732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 19049977 - 19049911
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| ||||||||||||| | ||||| ||||||||| |||||||||||| | |||||||||||||    
T  19049977 tggtcccttaacttatttttggatttcattttgatcccctaattataaagtgtctcaatttggtccc 19049911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 39592415 - 39592329
Alignment:
Q  85 ttatagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcc 171  Q
    |||||| ||||||||||||| |||||| |||||||||||| |||||||| |||  |||| ||| |||||||| | |||| |||||||    
T  39592415 ttataggcttaatatatcatttggtcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtcc 39592329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 3533706 - 3533617
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||||||||||  |||||| || |||| | ||| |||||||| | |||||||||||| |||| |||||| ||||||||| ||||||||    
T  3533706 ttaacttatttttaattttcatttcgatcacctaactataaagtgtctcaatttggtccgataactcttctactgtttaccattttggtc 3533617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 26788540 - 26788629
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    ||||||||||||| ||||||| |||| ||| |||| |||||| | | ||||||| |||||||||||||||| | ||||||  ||||||||    
T  26788540 ttaacttatttttagttttcactttggtcctataagtataaaatatctcaatttcgtcccataaatcttctgccgtttactattttggtc 26788629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 52660312 - 52660207
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    |||| ||||||||| |||| | |||| || | ||| |||||||| | | |||| ||||||||||||||||| | ||||||| ||||| |||| |||||||    
T  52660312 ttaatttattttttatttttattttggtctcctaactataaagtatcttaattcggtcccataaatcttctgccgtttaccattttgatcatttctgttt 52660213  T
Q  213 gttttt 218  Q
    ||||||    
T  52660212 gttttt 52660207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 56000305 - 56000394
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||||||||||  |||||| ||||||||| ||| |||||||| | ||||||| |||| |||| |||||| | ||||||| ||||||||    
T  56000305 ttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctgccgtttaccattttggtc 56000394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 30683132 - 30683056
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttc 182  Q
    |||||| |||| ||||||||  |||||| |||| |||| ||| |||||||| | |||||||||||||||||||||||    
T  30683132 tggtcccttaatttatttttgattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttc 30683056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 53400203 - 53400271
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||||||||| | ||||| |||| |||||||| |||||||| | |||||||||||| |||||||||    
T  53400203 ttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtcctataaatctt 53400271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 6138994 - 6139137
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||| || | ||| |||||||||||| | || ||| |||| |||| ||||||| || | | ||||||||||| ||||| |||| |  ||||||    
T  6138994 cttaatacatcctccgatcccttaacttattttattttctcagtttggtcccttaattattaaatgtctcaatttggtctcataactcttatgttgttta 6139093  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
       |||||||||| |||||| || ||||||||||||| ||||||    
T  6139094 ttattttggtcatctctgttagtattttaatgtctaatattttt 6139137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 183
Target Start/End: Original strand, 30682717 - 30682808
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||||| || || |||||| ||||||||||||| ||||||| |||| |||| ||| |||||||| | | |||||||||  |||||||||||    
T  30682717 cttaatacataatttggtcccttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggtcttataaatcttct 30682808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 40146740 - 40146649
Alignment:
Q  94 taatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttc 185  Q
    ||||| ||||| |||||| ||||| ||||||| ||||| | |||| |||  ||| |||||||| | ||||||||||||||||| ||||||||    
T  40146740 taatacatcatttggtcccttaacgtatttttggtttttattttggtcctttaactataaagtgtctcaatttggtcccataagtcttcttc 40146649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 44128458 - 44128343
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttct 186  Q
    |||| ||||||| ||| | |||||| |||||||||||||  ||||||||||| |||| ||| |||||||| | ||||||| ||||  |||||||| | |     
T  44128458 ataggcttaatacatcgtttggtcctttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgcc 44128359  T
Q  187 gtttaccgttttggtc 202  Q
    ||||||  ||||||||    
T  44128358 gtttactattttggtc 44128343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 86800 - 86910
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| | |||  |||| |||||||| ||||||| |||| | || ||| |||||||  | ||||||||||||||||||| |||| | |||||    
T  86800 cttaatacatcatttagtctcttaatttatttttagttttcactttggttccctaactataaagcatctcaatttggtcccataaatattctgccgttta 86899  T
Q  192 ccgttttggtc 202  Q
    | |||||||||    
T  86900 ctgttttggtc 86910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 26376326 - 26376416
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttc 182  Q
    ||||||||||  | |||||| |||| |||||||| ||||||| ||||||||| ||| ||||||   | ||||||||||||||||| |||||    
T  26376326 cttaatatatgctttggtcccttaaattatttttggttttcattttgatcccctaactataaaacgtctcaatttggtcccataagtcttc 26376416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 29663661 - 29663746
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttg 199  Q
    |||| |||||||| ||||||| ||||||||| ||| |||||| | | ||||||||||||||||| |||||| | ||||||| |||||    
T  29663661 ttaatttatttttggttttcattttgatccc-taactataaattgtctcaatttggtcccataactcttctgccgtttaccattttg 29663746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 38370279 - 38370405
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||| | |||||| |||||||||||||  ||||||||||| ||   |||  ||||||| | ||||||||||| ||||| ||||||   |||||    
T  38370279 cttaatacatcgtttggtcccttaacttatttttcattttcaatttggtcatctaacgataaagtgtatcaatttggtctcataactcttctgtcgttta 38370378  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
    || |||||||||| || ||| ||||||    
T  38370379 ccattttggtcatctccgttagttttt 38370405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 43894102 - 43894228
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| | |||| ||||||||||||| ||||||| |||| |||| ||| |||||| | | ||||||||||| ||||| | || |||||||      
T  43894102 cttaatacatcatatagtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcacataactatttttctgttac 43894201  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
    |  |||||||||| || ||| ||||||    
T  43894202 ctcttttggtcatatccgttggttttt 43894228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 44159082 - 44159208
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    |||||||||||  | ||||| |||||||||||| | |||||| ||||||| | ||| ||| |||| |||||||||||| ||| || |||||| | |||||    
T  44159082 cttaatatatctcccggtcctttaacttattttattttttcagtttgatctcttaactattaagtgtttcaatttggttccacaactcttctgccgttta 44159181  T
Q  192 ccgttttggtcatgtctgtttgttttt 218  Q
       |||||||||| || ||| ||||||    
T  44159182 ttattttggtcatctccgttagttttt 44159208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 172
Target Start/End: Complemental strand, 6616335 - 6616250
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||| ||||||| ||||| |||||| ||||||||||||  ||||||| |||| |||| ||| |||||||| | |||| ||||||||    
T  6616335 ataggcttaatacatcatttggtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtccc 6616250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 34438424 - 34438529
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    |||||||||||| | || ||| |||  |||| ||| |||||||| | |||||||||||||||||||||||| | ||||||  |||||||  | ||||||     
T  34438424 ttaacttattttattttctcagtttagtcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctctgtta 34438523  T
Q  213 gttttt 218  Q
    ||||||    
T  34438524 gttttt 34438529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 5688727 - 5688667
Alignment:
Q  121 ttttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||| |||||||||||| |||| ||| |||||||| | |||||||||| |||||||||||    
T  5688727 tttttagttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatctt 5688667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 15445447 - 15445511
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtc 170  Q
    |||||| ||||||||||||| | ||||| |||| |||| |||||||||||| | |||||||||||    
T  15445447 tggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatttggtc 15445511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 26121894 - 26121955
Alignment:
Q  117 cttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatct 180  Q
    ||||||||||||||||| || |   ||||||||||||||| |||||||||| ||||||||||||    
T  26121894 cttattttttgttttcatttagt--ccataattataaagtgtttcaatttgatcccataaatct 26121955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 39590938 - 39591002
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagt 156  Q
    ||||||| ||||| |||||| ||||||||||||| ||||||| |||| |||| ||| ||||||||    
T  39590938 cttaatacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagt 39591002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 49923920 - 49923864
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatccc 143  Q
    |||| ||||||||||||| |||||| ||||||||||||  |||||||||||| ||||    
T  49923920 ataggcttaatatatcatttggtcccttaacttattttcagttttcaatttggtccc 49923864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 2309842 - 2309921
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||||||  | |||||| |||| |||||||| | ||||| |||| || |||||||||||||| |||||||||| ||||    
T  2309842 ttaatatatgttttggtcccttaatttatttttggatttcattttggtctcataattataaagtgtttcaatttgatccc 2309921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 183
Target Start/End: Original strand, 17319039 - 17319130
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||||| |||| | ||||  ||||||||||||   || ||| ||||||| | ||| |||||||| |||||||||||| |||||||||||||    
T  17319039 cttaatacatcacccggtctcttaacttattttaatttctcagtttgatctcttaactataaagtgtttcaatttggttccataaatcttct 17319130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 235
Target Start/End: Original strand, 41348236 - 41348379
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| |||  ||||||| |||||||||||| | || ||| ||||||||| ||| ||| |||| | |||||||| |||||||| ||||| ||  ||||    
T  41348236 cttaatacatcccctggtcctttaacttattttattttctcagtttgatcccttaactattaagtgtgtcaatttgatcccataagtcttcctccattta 41348335  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
        | ||||| | ||| || |||||||||||| ||||||||||    
T  41348336 ttaatgtggtcctctctattagttttttaatgtataaaattttt 41348379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 42713462 - 42713537
Alignment:
Q  94 taatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggt 169  Q
    ||||||||||| |||||| |||||||| || || ||||| |||||||||| ||| ||| |||  ||||||||||||    
T  42713462 taatatatcatttggtcctttaacttaattctttttttcgatttgatcccttaactattaagcgtttcaatttggt 42713537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 236
Target Start/End: Complemental strand, 52981248 - 52981125
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    ||||||||||||| ||||||| |||| ||||  || ||| |||| ||||||  ||||||| ||  ||||||  ||||||| ||||||||| |  | |||     
T  52981248 ttaacttatttttagttttcattttggtccccaaactatcaagtgtttcaaactggtcccttatgtcttctgttgtttactgttttggtcctcgcagtta 52981149  T
Q  213 gttttttaatgtctaaaattttta 236  Q
    ||||||| |||||||| |||||||    
T  52981148 gtttttttatgtctaatattttta 52981125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 306588 - 306654
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| ||||||||||||| | |||||||||| |||| ||| | |||| | |||||||||||||||    
T  306588 tggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtttcaatttggtccc 306654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 182
Target Start/End: Complemental strand, 10403535 - 10403446
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttc 182  Q
    ||||||| ||||| | |||  ||||||||||||| ||||||| ||||||  | ||| |||||||| | ||||||||||| |||||||||||    
T  10403535 cttaatacatcatttagtctcttaacttatttttggttttcactttgatttc-taactataaagtgtatcaatttggtctcataaatcttc 10403446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 46794851 - 46794917
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| ||||||||||||| | |||||||||| |||| ||| | |||| | |||||||||||||||    
T  46794851 tggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtttcaatttggtccc 46794917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 56001373 - 56001303
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataa 176  Q
    |||||| |||||||||||||| |||||| ||||  ||| ||| |||||||| | |||||||||||| ||||    
T  56001373 tggtcccttaacttattttttattttcattttggccccctaactataaagtgtctcaatttggtcctataa 56001303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 181
Target Start/End: Original strand, 38417566 - 38417639
Alignment:
Q  108 gtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||| |||||||||||| | || ||| |||| |||| ||| ||| |||| | ||||||||||||||||||||||    
T  38417566 gtcctttaacttattttattttctcagtttggtcccttaactattaagtgtgtcaatttggtcccataaatctt 38417639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 218
Target Start/End: Complemental strand, 38419115 - 38419010
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    |||||||||||| | || ||| ||| || || ||||||| |||| | ||||||||||| ||||| |||||| | |||||| ||||| ||||| || |||     
T  38419115 ttaacttattttattttctcagtttaattccttaattattaagtgtgtcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgtta 38419016  T
Q  213 gttttt 218  Q
    ||||||    
T  38419015 gttttt 38419010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 5687220 - 5687284
Alignment:
Q  140 tcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcat 204  Q
    |||| ||| |||||||| | |||||||||||||||||||||| | | ||||||  ||||||||||    
T  5687220 tcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcat 5687284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 172
Target Start/End: Original strand, 29686253 - 29686333
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    ||||||| ||||| | |||| ||||||||||||| ||||||| |||| |||| ||| |||||| | | |||| ||||||||    
T  29686253 cttaatacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaattgtctcaaattggtccc 29686333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 32980571 - 32980411
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| || |||||||||||||||| ||||||||||||| |||| ||| || ||||| | |||||||||||| ||||||||||| | |||||    
T  32980571 cttaatatatcatttgatccattaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgttta 32980472  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt-atattgtttcaaccat 251  Q
    |  |||||||||| || ||| |||||||||| ||||| |||||| ||||  ||||||||||    
T  32980471 ctattttggtcatctccgttagttttttaatttctaacatttttgatatgatttcaaccat 32980411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 114 - 244
Target Start/End: Complemental strand, 19253099 - 19252968
Alignment:
Q  114 taacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgtttg 213  Q
    |||||||||||| |||||||||||| |||| |||||||||| | | |||||||| |||||||||| |||| | ||||||| |||||||| |||| ||||     
T  19253099 taacttatttttggttttcaatttggtcccctaattataaaatgtctcaatttgatcccataaatattctgccgtttaccattttggtcctgtccgttta 19253000  T
Q  214 ttttttaatgtctaa-aatttttatattgttt 244  Q
    ||||||||||||||| | ||||||||||||||    
T  19252999 ttttttaatgtctaatattttttatattgttt 19252968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 51825740 - 51825628
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| |||||| ||||||||||||| | ||||| |||| |||| ||| |||||||| ||||||||||||||||||||||||||   |||||    
T  51825740 cttaatatatcatttggtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtcgttta 51825641  T
Q  192 ccgttttggtcat 204  Q
    |  ||||||||||    
T  51825640 ctattttggtcat 51825628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 251
Target Start/End: Complemental strand, 8372735 - 8372575
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||| | |||||| ||||||||||||| ||||||| |||| |||| ||| |||||||| | ||||||||||||||||||||  |  | |||||    
T  8372735 cttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaatccacaacagttta 8372636  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt-atattgtttcaaccat 251  Q
    |  |||||||||  || ||| |||||||||||| ||| |||||| ||||  ||||||||||    
T  8372635 ctattttggtcacctccgttagttttttaatgtttaatatttttgatatgatttcaaccat 8372575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 236
Target Start/End: Original strand, 17345308 - 17345451
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| || || |||||| ||||||||||||| |||||||  ||| |||| ||| || ||||| | |||||||||| || |||||||||||||| |||    
T  17345308 cttaatacattatttggtcccttaacttatttttggttttcaggttggtcccctaactaaaaagtatctcaatttggttccttaaatcttcttctg-tta 17345406  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttta 236  Q
    || |||||||| | || ||| |||||||||||||||| |||||||    
T  17345407 cctttttggtcctctccgttagttttttaatgtctaatattttta 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 104 - 183
Target Start/End: Complemental strand, 51401458 - 51401379
Alignment:
Q  104 tctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    |||||||| ||||||||||||| ||||||| |||| |||| ||| |||||||| | ||||||||||||||||||||||||    
T  51401458 tctggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttct 51401379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 8371217 - 8371327
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| || ||| ||||||||||||||||||||| |||| |||| ||| |||||| | | |||||||||| ||||||||||||| | |||||    
T  8371217 cttaatacatcatttgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgcagttta 8371316  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  8371317 ctattttggtc 8371327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 49122121 - 49122011
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| |||||| ||||||||||||| ||||||| |||| || | ||| |||||||| | ||||||||||| ||||| | |||| | |||||    
T  49122121 cttaatatatcatttggtcctttaacttatttttggttttcattttggtctcttaactataaagtgtctcaatttggtctcataagttttctgccgttta 49122022  T
Q  192 ccgttttggtc 202  Q
    || ||||||||    
T  49122021 ccattttggtc 49122011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 189
Target Start/End: Complemental strand, 17350221 - 17350124
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtt 189  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||||||| |||| ||| |||||||| | ||||||||||||| ||  |||||| |||||    
T  17350221 cttaatacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtcccttatgtcttctcctgtt 17350124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 41386127 - 41386216
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||| | |||||| ||||||||||||| |||||||||||| |||| ||| |||||||| | |||||||||| |||||||||||    
T  41386127 cttaatacatcgtttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatctt 41386216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 177
Target Start/End: Complemental strand, 41387552 - 41387467
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaa 177  Q
    ||||||| ||||| |||||| ||||||||||||| |||||||||||| |||| ||| |||||| | | ||||||||||||||||||    
T  41387552 cttaatacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaa 41387467  T

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Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 42632703 - 42632792
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||| |||||||| |||| |||||||||||| |||| ||| |||||||| | |||||||| |||||||||||||    
T  42632703 cttaatacatcatttggtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatctt 42632792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 42634005 - 42633916
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||| |||||||||||||  ||||||||||| |||| ||| |||| ||| | ||||||||||||||||||||||    
T  42634005 cttaatacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactatagagtgtctcaatttggtcccataaatctt 42633916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 48252944 - 48253073
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| |||||||||| |||||||| | |||| |||| ||| |||||||| | ||||||||||||||||| ||||| || ||||||   | | |||||     
T  48252944 tggtcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtagtcatc 48253043  T
Q  206 tctgtttgttttttaatgtctaaaattttt 235  Q
    || ||| ||||||||||||||||| |||||    
T  48253044 tccgttagttttttaatgtctaaatttttt 48253073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 192
Target Start/End: Complemental strand, 47767073 - 47766970
Alignment:
Q  88 tagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctg 187  Q
    ||||||||||||||  | |||| ||||||||||||||| ||||||| |||| |||| ||| |||||||| | ||||||||||||||||| ||||| || |    
T  47767073 tagacttaatatatactttggttcattaacttatttttggttttcattttggtccc-taactataaagtgtctcaatttggtcccataagtcttcctccg 47766975  T
Q  188 tttac 192  Q
    |||||    
T  47766974 tttac 47766970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 183
Target Start/End: Original strand, 43101899 - 43101982
Alignment:
Q  100 atcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||| |||||| ||||||||||||| ||||||| |||| |||  |||||||||||| | ||||||||||||||||| ||||||    
T  43101899 atcatttggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtcccataattcttct 43101982  T

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Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 192
Target Start/End: Original strand, 47806812 - 47806915
Alignment:
Q  89 agacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgt 188  Q
    |||||||||| ||||| | || | ||||||||||||| | ||||| |||| |||| |||||||||||| | |||||||| ||| ||||||||||| ||||    
T  47806812 agacttaatacatcatttagtaccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttgatcctataaatcttctgctgt 47806911  T
Q  189 ttac 192  Q
    ||||    
T  47806912 ttac 47806915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 54654085 - 54653994
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||||| ||||| |||||| ||||||||||||| | ||||| |||| |||| ||| |||||||| | ||||||||||||||||| ||||||    
T  54654085 cttaatacatcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttct 54653994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 10987772 - 10987686
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    ||||||| ||||| || ||| ||||||||||||| ||||||| |||| |||| ||| |||||||| | |||||||||||||||||||    
T  10987772 cttaatacatcatttgatcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaat 10987686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 26799025 - 26798915
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||  ||||||||||||| ||||| | |||| |||| ||| |||||| | | ||||||||||||||||| ||||| || |||||    
T  26799025 cttaatacatcatttggtctcttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataattcttcctccgttta 26798926  T
Q  192 ccgttttggtc 202  Q
    || ||||||||    
T  26798925 ccattttggtc 26798915  T

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Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 19622003 - 19622112
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| ||||| |||||| |||| |||||||| ||||||| |||| |||| ||| |||||||| | ||||||| ||| |||||||||||| || |||||    
T  19622003 ttaatacatcatttggtcctttaagttatttttggttttcactttggtcccctaactataaagtgtctcaatttagtctcataaatcttctgctatttac 19622102  T
Q  193 cgttttggtc 202  Q
     | |||||||    
T  19622103 tggtttggtc 19622112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 21127943 - 21128048
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    |||||||||||| | |||||| ||||||| | ||| ||| |||| | ||||||||||||||||| |||||| | ||||||| |||||||||| || || |    
T  21127943 ttaacttattttattttttcagtttgatctcttaactattaagtgtgtcaatttggtcccataactcttctgccgtttaccattttggtcatttccgtct 21128042  T
Q  213 gttttt 218  Q
    ||||||    
T  21128043 gttttt 21128048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 202
Target Start/End: Original strand, 29536725 - 29536821
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||| || |||||||||| | ||||| ||||||||  ||| |||||||| | |||||||||||||||||||||||||  ||||||  ||||||||    
T  29536725 tggtcccttgacttatttttggatttcattttgatcctctaactataaagtgtctcaatttggtcccataaatcttctttcgtttactattttggtc 29536821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 51400226 - 51400338
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| ||||||||||||| ||||||| |||||| || ||| |||||||| | ||||||| ||||||||||| |||  | || |||| |||||||| |     
T  51400226 tggtcccttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataaattttcagccgtataccattttggtcctt 51400325  T
Q  206 tctgtttgttttt 218  Q
    || ||||||||||    
T  51400326 tccgtttgttttt 51400338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 11220763 - 11220644
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| |||||||||||||   ||||| |||| |||| ||| |||||||| | |||||||||||| |||||||||||   ||||||  ||||||||       
T  11220763 tggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcctataaatcttctgtcgtttactattttggtcccc 11220664  T
Q  206 tctgtttgttttttaatgtc 225  Q
    || |||||||||||||||||    
T  11220663 tccgtttgttttttaatgtc 11220644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 12062505 - 12062391
Alignment:
Q  90 gacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtt 189  Q
    ||||||||| ||| || ||||| |||||||||||| | |||||| |||| |||| ||| ||| |||| | ||||||||||||||| | |||| | |||||    
T  12062505 gacttaatacatcctccggtcccttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttggtcccattactcttttgctgtt 12062406  T
Q  190 taccgttttggtcat 204  Q
    |||  ||||||||||    
T  12062405 tactattttggtcat 12062391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 249
Target Start/End: Original strand, 35173160 - 35173302
Alignment:
Q  108 gtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtc 207  Q
    |||| |||||||||||| | || ||||||| ||||| ||| ||| |||| ||||||||||||| ||||| |||| |   ||||||  |||||||||| ||    
T  35173160 gtcccttaacttattttattttctcaatttcatcccttaactattaagtatttcaatttggtctcataactcttttgtcgtttactattttggtcatttc 35173259  T
Q  208 tgtttgttttttaatgtctaa-aatttttatattgtttcaacc 249  Q
    | || || || |||||||||| |||||||||||  ||||||||    
T  35173260 tattagtattctaatgtctaataatttttatataatttcaacc 35173302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 36626728 - 36626838
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||||||||| |||||| |||||||||||| | ||| ||||||| |  | ||| ||| |||| ||||||||||||||| |||||||| |   |||||    
T  36626728 cttaatatatcatttggtcctttaacttattttctatttacaatttggtttcctaactatgaagtgtttcaatttggtcccttaaatcttatgtcgttta 36626827  T
Q  192 ccgttttggtc 202  Q
    | |||||||||    
T  36626828 ctgttttggtc 36626838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 43345337 - 43345459
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgttt 212  Q
    |||||||||||| | || ||| || | |||| ||| |||||| | ||||||||||||||||||||||||||   ||||||| |||||||  | || |||     
T  43345337 ttaacttattttattttctcagttaggtcccttaactataaaatgtttcaatttggtcccataaatcttctctcgtttaccattttggttttctccgtta 43345436  T
Q  213 gttttttaatgtctaaaattttt 235  Q
    |||||||||||| ||| ||||||    
T  43345437 gttttttaatgtttaatattttt 43345459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 53808315 - 53808404
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    ||||||| ||||| |||||| ||||||||||||  ||||| |||||| || | ||| |||||||| | ||||| ||||||||||||||||    
T  53808315 cttaatacatcatttggtcccttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataaatctt 53808404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 47855443 - 47855347
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    |||||| ||||||||||||| | ||||| |||| |||  ||| |||||||| | |||||||||||| ||||||||||| | ||||||  ||||||||    
T  47855443 tggtcccttaacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtc 47855347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 172
Target Start/End: Original strand, 39133035 - 39133094
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    ||||||||||||| |||||||||||| |||| ||| |||||||| | |||||||||||||    
T  39133035 ttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtccc 39133094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 219
Target Start/End: Complemental strand, 49334432 - 49334329
Alignment:
Q  116 acttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgtttgtt 215  Q
    |||||||||||||||||| |||| |||  ||| |||||| | | ||||| |||||| ||||||||||| | ||||||  ||||| |||| |||||| |||    
T  49334432 acttattttttgttttcattttggtcctttaactataaattgtctcaatatggtccgataaatcttctaccgtttactattttgatcatctctgttagtt 49334333  T
Q  216 tttt 219  Q
    ||||    
T  49334332 tttt 49334329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 54752613 - 54752692
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcc 171  Q
    ||||||| ||||| |||||| |||||||||||||  ||||||||||  |||| ||| |||||||| | ||||||||||||    
T  54752613 cttaatacatcatttggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcc 54752692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 204
Target Start/End: Original strand, 11219441 - 11219539
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcat 204  Q
    |||||| ||||||||||||| | ||||| |||| |||| ||| |||||||| | ||||||||||| ||| | |||||| | ||||||  ||||||||||    
T  11219441 tggtccgttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtcat 11219539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 233
Target Start/End: Complemental strand, 25585961 - 25585811
Alignment:
Q  83 tcttatagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttc 182  Q
    ||||| || |||||||||| || |||||| |||| ||||||||| |||||| | || |||  ||| ||| ||   | ||||||||||| |||||||||||    
T  25585961 tcttaaaggcttaatatattatttggtcccttaatttattttttattttcactctggtcctctaactattaaacgtctcaatttggtctcataaatcttc 25585862  T
Q  183 ttctgtttaccgttttggtcatgtctgtttgttttttaatgtctaaaattt 233  Q
    |   ||||||  |||| ||||| || ||| |||||||||||||||| ||||    
T  25585861 tgtcgtttactattttagtcatctccgttagttttttaatgtctaacattt 25585811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 49898577 - 49898531
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttca 133  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||||    
T  49898577 atagatttaatatatcatttcgtccattaacttattttttgttttca 49898531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 40892177 - 40892234
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtc 170  Q
    ||||||||||| ||||||||||||||||||| ||||| |||| ||||||  |||||||    
T  40892177 ttaacttatttcttgttttcaatttgatcccttaattttaaattttttctgtttggtc 40892234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 51824122 - 51824235
Alignment:
Q  91 acttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttt 190  Q
    |||||||||||||| |||||  ||||||||||||| ||||| | ||||||| | ||| | |||||| | |||||||| |  |||||||||||| |  |||    
T  51824122 acttaatatatcatttggtctcttaacttatttttagtttttactttgatctcttaaatttaaagtgtctcaatttgatttcataaatcttctaccattt 51824221  T
Q  191 accgttttggtcat 204  Q
    ||| |||| |||||    
T  51824222 accatttttgtcat 51824235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 53809618 - 53809469
Alignment:
Q  86 tatagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttc 185  Q
    ||||| ||||||| ||||| | |||| ||||||||||||||||||||| |||| |||| ||| | ||||   | ||||||| ||| ||||| | ||| ||    
T  53809618 tataggcttaatacatcatttagtcccttaacttattttttgttttcattttggtcccctaactttaaaacgtctcaattttgtctcataagttttcctc 53809519  T
Q  186 tgtttaccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
     ||||||   | | ||||| || ||| ||||||||||||||||| |||||    
T  53809518 cgtttactaatgttgtcatctccgttagttttttaatgtctaaatttttt 53809469  T

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Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 211
Target Start/End: Original strand, 25583111 - 25583230
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| | |||| |||||||||||||  |||||| |||| |||| ||| ||| ||   | ||||||||||||||||| |||||| | |||||    
T  25583111 cttaatacatcatttagtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgttta 25583210  T
Q  192 ccgttttggtcatgtctgtt 211  Q
    |  |||||||| | ||||||    
T  25583211 ctattttggtcctctctgtt 25583230  T

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Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 47808209 - 47808134
Alignment:
Q  108 gtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    |||| ||||||||||||| | ||||| |||| | || ||| |||||||| | ||||||||||| ||||||||||||    
T  47808209 gtcccttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtctcataaatcttct 47808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 211
Target Start/End: Complemental strand, 35174480 - 35174382
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgtctgtt 211  Q
    |||||||||||| | |||||| |||| |||| ||| ||| |||| ||||||  ||||||||||| ||||||   ||||||  |||||||||| ||||||    
T  35174480 ttaacttattttattttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgtt 35174382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 43103415 - 43103305
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    |||||||||| || || ||| |||||||||||||| |||| | ||||||||| ||| || ||| | | ||||||||||  ||||||| |||| | |||||    
T  43103415 cttaatatattatttgatcccttaacttattttttatttttattttgatcccctaactacaaaatatctcaatttggtttcataaattttctgccgttta 43103316  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  43103315 ctattttggtc 43103305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 219
Target Start/End: Original strand, 7820401 - 7820514
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| |||||||||||||   ||||| |||| |||  ||| |||||||| ||||||||||| ||||||||| || |   |||||| ||||||||| |     
T  7820401 tggtcccttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaatttggacccataaattttatgtcgtttactgttttggtcctc 7820500  T
Q  206 tctgtttgtttttt 219  Q
    || ||| |||||||    
T  7820501 tccgttagtttttt 7820514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 10986675 - 10986735
Alignment:
Q  118 ttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    |||||||| ||||||| |||| |||  ||| |||||||| |||||||||||||| ||||||    
T  10986675 ttatttttggttttcactttggtccattaactataaagtgtttcaatttggtcctataaat 10986735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 181
Target Start/End: Complemental strand, 13078049 - 13077981
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatctt 181  Q
    |||||||||||||  ||||||||||| |||  ||| |||||| | | | ||||||||||||||||||||    
T  13078049 ttaacttatttttgattttcaatttggtcctctaagtataaaatgtcttaatttggtcccataaatctt 13077981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 23559831 - 23559907
Alignment:
Q  107 ggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||| |||||||||||| | || ||| |||| |||| ||||||| |||| | |||||||| |||||||| ||||||    
T  23559831 ggtcccttaacttattttattttctcagtttggtcccttaattattaagtgtctcaatttgatcccataattcttct 23559907  T

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Target: scaffold1974 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 752 - 621
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttct 186  Q
    |||| ||||||| ||||| |||||| ||||||||||||||||| ||| |||| |||| ||| |||||||| | ||||||| |||||||||||||||| |     
T  752 ataggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgcc 653  T
Q  187 gtttaccgttttggtcatgtctgtttgttttt 218  Q
    ||||||| |||||||||| || ||| ||||||    
T  652 gtttaccattttggtcatctccgttagttttt 621  T

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Target: scaffold1878 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 218
Target Start/End: Original strand, 522 - 653
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttct 186  Q
    |||| ||||||| ||||| |||||| ||||||||||||||||| ||| |||| |||| ||| |||||||| | ||||||| |||||||||||||||| |     
T  522 ataggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgcc 621  T
Q  187 gtttaccgttttggtcatgtctgtttgttttt 218  Q
    ||||||| |||||||||| || ||| ||||||    
T  622 gtttaccattttggtcatctccgttagttttt 653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 9602 - 9471
Alignment:
Q  87 atagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttct 186  Q
    |||| ||||||| ||||| |||||| ||||||||||||||||| ||| |||| |||| ||| |||||||| | ||||||| |||||||||||||||| |     
T  9602 ataggcttaatacatcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgcc 9503  T
Q  187 gtttaccgttttggtcatgtctgtttgttttt 218  Q
    ||||||| |||||||||| || ||| ||||||    
T  9502 gtttaccattttggtcatctccgttagttttt 9471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 182
Target Start/End: Original strand, 8384 - 8466
Alignment:
Q  100 atcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttc 182  Q
    ||||| |||||| ||||||||||||| ||||||| |||| |||| ||| |||||| | | |||| ||||||||||||||||||    
T  8384 atcatttggtcccttaacttatttttggttttcactttgctcccctaactataaactgtctcaaattggtcccataaatcttc 8466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 2370 - 2257
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| ||||||||||||| ||||||| |||| |||| |||||||||||| ||||||||||||||||||| |||||| ||||||||  |||||||| |     
T  2370 tggtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataactcttctactgtttactattttggtcctt 2271  T
Q  206 tctgtttgtttttt 219  Q
    || ||| |||||||    
T  2270 tccgttagtttttt 2257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 56823 - 56714
Alignment:
Q  88 tagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctg 187  Q
    ||||||||||| ||||| |||||| ||||||||||||||| ||||| |||| |||| |||||||||||| | |||||||||||| ||||||||||| | |    
T  56823 tagacttaataaatcatttggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccg 56724  T
Q  188 tttaccgttt 197  Q
    ||||| ||||    
T  56723 tttactgttt 56714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 236
Target Start/End: Original strand, 54596 - 54732
Alignment:
Q  100 atcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttg 199  Q
    ||||| ||| || ||||| || |||| ||||| | |||| |||  |||||||||||| | ||||||||||||||||||||||| ||||||||||  | ||    
T  54596 atcatttggccccttaacgtaattttggtttttattttggtcctttaattataaagtgtctcaatttggtcccataaatcttcctctgtttaccaatgtg 54695  T
Q  200 gtcatgtctgtttgttttttaatgtctaaaattttta 236  Q
    ||| | || ||| ||||||| |||||||| |||||||    
T  54696 gtcctctccgttagttttttgatgtctaatattttta 54732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 235
Target Start/End: Complemental strand, 24934 - 24791
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||| | |||||| |||| |||||||| ||||||| |||| |||| |||||||||||| ||||||||||||||| ||  ||||| || |||      
T  24934 cttaatacatcgtttggtcccttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatttggtcccttatgtcttcctccgttac 24835  T
Q  192 ccgttttggtcatgtctgtttgttttttaatgtctaaaattttt 235  Q
    |  |||||||||| || ||| |||||||||||||||| ||||||    
T  24834 ctattttggtcatctccgttagttttttaatgtctaatattttt 24791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 92 - 183
Target Start/End: Original strand, 23403 - 23494
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttct 183  Q
    ||||||| ||||| |||||| ||||||||||||| ||||||| |||| |||| ||| |||||| | | ||||||||||||||||| ||||||    
T  23403 cttaatacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactcttct 23494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 47067 - 47177
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| |||||| |||||||||||||   ||||| ||||||||| ||| | |||| | | |||||||||||||||||||||||||| |||||    
T  47067 cttaatacatcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgttta 47166  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  47167 ctattttggtc 47177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 221
Target Start/End: Complemental strand, 48574 - 48446
Alignment:
Q  93 ttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttac 192  Q
    |||||| ||||| |||||| ||||||||||||| | ||||| |||| |||  ||| |||||||| | |||||||| |||||||||| |||| | ||||||    
T  48574 ttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtttac 48475  T
Q  193 cgttttggtcatgtctgtttgttttttaa 221  Q
      |||||||||| || |||  ||||||||    
T  48474 tcttttggtcatctccgttaattttttaa 48446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 11717 - 11846
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatg 205  Q
    |||||| |||||||||||||| |||||| |||  |||| |||||||||||| ||||||||||||||| ||  |||||| | |||  |  |||||||| |     
T  11717 tggtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtcccttatgtcttctccagttacctattttggtcctc 11816  T
Q  206 tctgtttgttttttaatgtctaaaattttt 235  Q
    || ||| |||||||||||||||| ||||||    
T  11817 tccgttagttttttaatgtctaatattttt 11846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 13320 - 13230
Alignment:
Q  95 aatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttc 185  Q
    |||| ||||| || ||| ||||||||||||| ||||||| |||| |||| ||| |||||| | | ||||||| ||||||||| ||||||||    
T  13320 aatacatcatatgatcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttcgtcccataactcttcttc 13230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 77279 - 77190
Alignment:
Q  113 ttaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtc 202  Q
    ||||||||||||||||||||| |||| || | ||| |||||||  ||||||||||||||||||||| |||| | |||||| |||||||||    
T  77279 ttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactgttttggtc 77190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 634 - 524
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgttta 191  Q
    ||||||| ||||| || ||||||||||||||||| |||||||||| | |||| ||| |||||||| | ||||||||||  |||||||||| | | |||||    
T  634 cttaatacatcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgttta 535  T
Q  192 ccgttttggtc 202  Q
    |  ||||||||    
T  534 ctattttggtc 524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 40024 - 39930
Alignment:
Q  88 tagacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttc 182  Q
    ||||||||||| || || |||||  ||||||||||||| | ||||| |||| |||| ||| |||||||| | |||||||||||||||||||||||    
T  40024 tagacttaatacattatttggtctcttaacttatttttggatttcactttggtcccctaagtataaagtgtctcaatttggtcccataaatcttc 39930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 233
Target Start/End: Original strand, 22123 - 22265
Alignment:
Q  90 gacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtt 189  Q
    ||||||||| ||||| || ||| ||| |||||||||  |||||| ||||||| | ||| |||||| | | |||||||| || ||||||||||||   |||    
T  22123 gacttaatacatcatttgatcccttaccttatttttgattttcactttgatctc-taactataaaatgtctcaatttgttcacataaatcttctgtcgtt 22221  T
Q  190 taccgttttggtcatgtctgtttgttttttaatgtctaaaattt 233  Q
    |||  |||||||||| || |||  ||||||||||||||| ||||    
T  22222 tactattttggtcatctccgttaattttttaatgtctaacattt 22265  T

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Target: scaffold0369 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 12907 - 12993
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaat 178  Q
    |||||||||| || |||||  |||||||||||||  |||| | |||| ||||||||||||||||| | ||||||||||| |||||||    
T  12907 cttaatatattatttggtctcttaacttatttttgatttttactttggtcccataattataaagtgtctcaatttggtctcataaat 12993  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 145990 - 145876
Alignment:
Q  90 gacttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtt 189  Q
    ||||||||| ||||| ||||   |||| |||||||| ||||||||||| ||||| ||| |||||| | | | |||||||||| ||||||||| | | |||    
T  145990 gacttaatacatcatttggtttcttaatttatttttggttttcaatttaatcccctaactataaaatgtcttaatttggtccaataaatcttatgccgtt 145891  T
Q  190 taccgttttggtcat 204  Q
    |||  ||||||||||    
T  145890 tactattttggtcat 145876  T

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Target: scaffold0098 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 42450 - 42333
Alignment:
Q  107 ggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataaatcttcttctgtttaccgttttggtcatgt 206  Q
    ||||| |||||||||||| | || ||| ||||||||| ||| ||| | || | |||||||| |||||||||||||||   ||||||  |||||||| | |    
T  42450 ggtcccttaacttattttattttctcagtttgatcccttaactattacgtgtatcaatttgatcccataaatcttctgtcgtttactattttggtcctct 42351  T
Q  207 ctgtttgttttttaatgt 224  Q
    ||||| || |||||||||    
T  42350 ctgttagtattttaatgt 42333  T

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Target: scaffold0177 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 1766 - 1832
Alignment:
Q  106 tggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtccc 172  Q
    |||||| ||||||||||||  | ||||| |||| |||| |||||||||||| | |||||||||||||    
T  1766 tggtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtccc 1832  T

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Target: scaffold0839 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 22 - 106
Alignment:
Q  92 cttaatatatcatctggtccattaacttattttttgttttcaatttgatcccataattataaagtttttcaatttggtcccataa 176  Q
    ||||||| || || |||||| |||||||||||||   ||||| ||||||||| ||||| ||||   | |||||||||||||||||    
T  22 cttaatacatgatttggtcccttaacttatttttgaatttcattttgatcccttaattttaaaccgtctcaatttggtcccataa 106  T

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