View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6632_low_5 (Length: 246)
Name: NF6632_low_5
Description: NF6632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6632_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 37293409 - 37293194
Alignment:
| Q |
14 |
cagcacagagttgagcacttgaactcaaaacttatatatatgaaagtataatttcctaaaccttgtgtatgttggcttgaaatataaaccaagattgctt |
113 |
Q |
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| T |
37293409 |
cagcacagagttgagcacttgaactcaaaacttatatatatgaaagtataatttcctaaaccttgtgtatgttggcttgaaatataaaccaagattgctt |
37293310 |
T |
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| Q |
114 |
gccnnnnnnnctatactgtgttaatattaatcttgcaacaataatttcctagccaagaaggatggaatctaaatatttcagtatagacaaatttgtgtca |
213 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
37293309 |
gcctttttttctatactgtgttaatattaatcttgcaacaataatttcctaaccaagaaggatggaatctaaatatttcagcatagacaaatttgtgtca |
37293210 |
T |
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| Q |
214 |
atactgttactatagt |
229 |
Q |
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|||||||||||||||| |
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| T |
37293209 |
atactgttactatagt |
37293194 |
T |
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