View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6633_low_3 (Length: 298)
Name: NF6633_low_3
Description: NF6633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6633_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 7 - 280
Target Start/End: Original strand, 30692918 - 30693191
Alignment:
| Q |
7 |
aggagcacagacatagagaacataacaacatgcatcaatcaaaaagcaattagagcgttaagaaatgttgtgcatataaaacaacacaaaatttaattaa |
106 |
Q |
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| T |
30692918 |
aggaacacacacatagagaacataacaacatgcatcaatcaaaaagcaattagagcgttaagaaatgttgtgcatataaaacaacacaaaatttaattaa |
30693017 |
T |
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| Q |
107 |
tatttactaattctattatcaccagaaagacaaattgaattgaagcttgtgaagtaagaaacgaaccatgtagaaagaatttgtaggtgaaaaagtagtc |
206 |
Q |
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| T |
30693018 |
tatttactaattctattatcaccagaaagacaaatcgaattgaagcttgtgacgtaagaaacgaatcatgtagaaataatttgtaggtgaaaaagtagtc |
30693117 |
T |
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| Q |
207 |
gtgtgtaacaggaaacggacagagtgaagaaggaacaacaacattctaggagttttgttttgaatcctttttct |
280 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30693118 |
gtgtgtaacaggaaacagacagagtgaagaaggaacaacaacattctaggagttttgttttgaatcctttttct |
30693191 |
T |
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