View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6635_high_24 (Length: 291)
Name: NF6635_high_24
Description: NF6635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6635_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 23 - 272
Target Start/End: Complemental strand, 40410267 - 40410018
Alignment:
| Q |
23 |
caaaggggtgaaaaggggtggcaactgaataaacacccttagttatcaaggttccaaattttcccaccacattcattctttgtagttaaagagtcaaaga |
122 |
Q |
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| T |
40410267 |
caaaggggtgaaaaggggtggcaactgaataaacacccttagttatcaaggttccaaattttcccaccacattcattctttgtagttaaagagtcaaaga |
40410168 |
T |
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| Q |
123 |
tggaaaagttccagaattttgggagaaccaaaaagaccgaagaaacttttaattaaatagtaagttatactctaagcaaagtgacccaagaatcgattat |
222 |
Q |
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| T |
40410167 |
tggaaaagttccagaattttgggagaaccaaaaagaccgaagaaacttttaattaaatagtaagttattctctaagcaaagtgacccaagaatcgattat |
40410068 |
T |
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| Q |
223 |
ctgaatttcttgatgtgattatgaattcttgcaggaagagcactgcatag |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40410067 |
ctgaatttcttgatgtgattatgaattcttgcaggaagagcactgcatag |
40410018 |
T |
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