View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6635_high_32 (Length: 238)
Name: NF6635_high_32
Description: NF6635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6635_high_32 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 10 - 222
Target Start/End: Complemental strand, 35576649 - 35576437
Alignment:
| Q |
10 |
caccaccaccacaacataaccacatctctctcaatttcataatcacttcttcaccgcgatttctaaacgcgattatcgttatttctctgttcacacgatt |
109 |
Q |
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| T |
35576649 |
caccaccaccataacataaccacatctctctcaatttcataatcacttcttcaccgcgatttctaaacgcgattatcgttatttctctattcacacgatt |
35576550 |
T |
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| Q |
110 |
aattaacgttaaaacgattaatcaatctatcaaattatcttggaatcgattattgttatgggcgagttgactcaaacggaggtgtactcgccaccacgaa |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35576549 |
aattaacgttaaaacgattaatcaatctatcaaattatcttggaatcgattattgttatgggcgagttgactcaaacggaggtgtactcgccaccacgaa |
35576450 |
T |
|
| Q |
210 |
ctcaacaagtttg |
222 |
Q |
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||||||||||||| |
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| T |
35576449 |
ctcaacaagtttg |
35576437 |
T |
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