View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6635_low_16 (Length: 358)
Name: NF6635_low_16
Description: NF6635
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6635_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 11 - 342
Target Start/End: Original strand, 45103941 - 45104272
Alignment:
| Q |
11 |
caaaggtgcaagttactatatatttattaataagtcatagtggaagttctgttaaagtatactatatcatgttcatgttgccaattttttaatggctttt |
110 |
Q |
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| T |
45103941 |
caaaagtgcaagttactatatatttattaataagtcatagtggaagttctgttaaagtatactatatcatgttcatgttgccaattttttaatggctttt |
45104040 |
T |
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| Q |
111 |
gagataagaaaggacaaaaacctcatgagtgagtgttctgaaaagggtaaaacggaataaccagaattaatcagaataatgttgttcccataactgtatt |
210 |
Q |
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| T |
45104041 |
gagataagaaaggacaaaaagctcatgagtgagtgttctgaaaagggtaaaacggaataaccagaattaatcagaataatgttgttcccataactgtatt |
45104140 |
T |
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| Q |
211 |
ttcttttggtctaaggaatgtatttatctataaaagctagatcaactagtttatggcccttcctatttaaattgagactcaaataaactgaaaattcatg |
310 |
Q |
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| T |
45104141 |
ttcttttggtctaaggaatatatttatctataaaagctagatcaactagtttatggcccttcctatttaaattgagactcaaataaactgaaaattcatg |
45104240 |
T |
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| Q |
311 |
aagattaagaactgattaagaggagcaacata |
342 |
Q |
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| T |
45104241 |
aagattaagaactgattaagaggagcaacata |
45104272 |
T |
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