View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6636_low_9 (Length: 518)
Name: NF6636_low_9
Description: NF6636
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6636_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 397; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 26 - 501
Target Start/End: Complemental strand, 9063988 - 9063513
Alignment:
| Q |
26 |
tactataaatgatgtgattcaagaaaaaacaccaaaagacaagttgacaacaaatgatgaagatgatgatcatgatcatgaagaagaaaaggaagaggag |
125 |
Q |
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| T |
9063988 |
tactataaatgatgtgaatcaagaaaaaacaccaaaagacaagttgacaacaaatgatgaagatgatgatcatgatcatgaagaagaaaaggaagaggag |
9063889 |
T |
|
| Q |
126 |
gtacgtgattccttgcatgttattcaaccaacaagtttaccaaagtcaaatgtaaatgatgaagatgtagctagcgattcaagttctgatctttttgaga |
225 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
9063888 |
gtacgtgattccttgcatgtttttcaaccaacaagtttaccaaagtcaaatgtaaatgatgaagatgtagctagtgattcaagttctgatctttttgaga |
9063789 |
T |
|
| Q |
226 |
tagagggcttctccacacaagctacaacgctggaatacccaacaaaacctagcatgatagagtgccaagagaccaccaccactacaaatgttttatgtga |
325 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
9063788 |
tagagggcttctccacacaagctacaacgctggaatacccaacaaaacctagcatgatagagtgccaagagaccaccaccgctacaaatgttttatgtga |
9063689 |
T |
|
| Q |
326 |
tacttagatgannnnnnnnnnnnnnnnncacaaatcaatagtgaaaaattaattcattgaactcaagaagtttatgagcttcaattaagaacgagtcatt |
425 |
Q |
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||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9063688 |
tacttagatgattttgttttttgtttttcacaaatcaatagggaaaaattaattcattgaactcaagaagtttatgagcttcaattaagaacgagtcatt |
9063589 |
T |
|
| Q |
426 |
cgtaaaaatcgggttcaaatcctgcttaaaacaatccttataatcagtcgaatttcaaattactaggagatcttcc |
501 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
9063588 |
cgaaaaaatcgggttcaaatcctgcttaaaacaatccttataatcagttgaatttcaaattactaggagatcttcc |
9063513 |
T |
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