View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6637_low_9 (Length: 290)
Name: NF6637_low_9
Description: NF6637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6637_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 5595126 - 5594853
Alignment:
| Q |
1 |
atttatctatattgtttaataattcttccatgatgtaagaccacaagactgaacagtacaaaaagtcaagagtacagttgaatggttttctaggaaatat |
100 |
Q |
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| T |
5595126 |
atttatctatattgtttaataattcttccatgatgtaagaccataagactgaacagtacaaaaagtcaagagtacagttgaatggttttctaggaaatat |
5595027 |
T |
|
| Q |
101 |
aaaatccaaacaggttgaaactgcaacaagcagggtcagtctaaaatttcaaaacttgcagttagtatatttaggaaccaaattctcttctcacctctct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5595026 |
aaaatccaaacaggttgaaactgcaacaagcagggtcagtctaaaatttcaaaacttgcagttagtatatttaggaaccaaattctcttctcacctctct |
5594927 |
T |
|
| Q |
201 |
ctgcacatattcacatggtaacctaagaaatattgtcttgtagtgagattatgcaattccatccatgaccagat |
274 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5594926 |
ctgcacatactcacatggtaacctaagaaatattgtcttgtagtgagattatgcaattccatccatgaccagat |
5594853 |
T |
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