View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6641_high_12 (Length: 590)

Name: NF6641_high_12
Description: NF6641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6641_high_12
NF6641_high_12
[»] chr7 (85 HSPs)
chr7 (7-590)||(40811152-40811713)
chr7 (211-412)||(32255003-32255205)
chr7 (198-411)||(43460725-43460938)
chr7 (405-571)||(41078931-41079097)
chr7 (195-419)||(47454335-47454557)
chr7 (190-322)||(47456366-47456498)
chr7 (195-373)||(40509675-40509852)
chr7 (189-371)||(41078748-41078930)
chr7 (195-367)||(32256343-32256513)
chr7 (333-472)||(669231-669369)
chr7 (233-402)||(13564150-13564319)
chr7 (195-373)||(22115105-22115283)
chr7 (196-327)||(45455358-45455489)
chr7 (194-373)||(6173393-6173569)
chr7 (194-307)||(33096866-33096979)
chr7 (195-421)||(47059106-47059334)
chr7 (196-422)||(40508377-40508602)
chr7 (190-373)||(43459448-43459629)
chr7 (191-378)||(11502356-11502544)
chr7 (306-408)||(35295809-35295909)
chr7 (314-423)||(2414863-2414970)
chr7 (194-307)||(30310118-30310231)
chr7 (194-307)||(32602930-32603043)
chr7 (194-307)||(45454035-45454148)
chr7 (195-373)||(4299989-4300166)
chr7 (315-422)||(44372848-44372953)
chr7 (315-422)||(44381704-44381809)
chr7 (195-286)||(30311496-30311587)
chr7 (205-399)||(41079751-41079942)
chr7 (333-444)||(46201266-46201377)
chr7 (233-402)||(22336015-22336184)
chr7 (211-308)||(30333299-30333396)
chr7 (194-365)||(33779036-33779203)
chr7 (314-414)||(22537675-22537776)
chr7 (309-413)||(43441459-43441561)
chr7 (223-373)||(22538790-22538938)
chr7 (223-390)||(40812538-40812703)
chr7 (191-427)||(46835669-46835905)
chr7 (197-351)||(24282939-24283091)
chr7 (194-309)||(4298710-4298825)
chr7 (195-413)||(30334543-30334755)
chr7 (223-373)||(47060417-47060565)
chr7 (223-363)||(11501206-11501344)
chr7 (7-85)||(38857159-38857236)
chr7 (9-82)||(38857891-38857963)
chr7 (360-472)||(5095228-5095340)
chr7 (360-472)||(24051365-24051477)
chr7 (368-472)||(39752318-39752422)
chr7 (333-413)||(41328354-41328434)
chr7 (67-113)||(13921322-13921367)
chr7 (333-411)||(39981452-39981530)
chr7 (69-119)||(40810496-40810546)
chr7 (211-276)||(35130-35195)
chr7 (67-107)||(12210648-12210687)
chr7 (64-112)||(14101419-14101466)
chr7 (64-112)||(14411436-14411483)
chr7 (273-356)||(22337330-22337411)
chr7 (68-112)||(34139728-34139771)
chr7 (214-261)||(534118-534165)
chr7 (214-261)||(537331-537378)
chr7 (64-107)||(14102403-14102445)
chr7 (64-107)||(14412420-14412462)
chr7 (64-119)||(30846850-30846904)
chr7 (43-86)||(48590314-48590357)
chr7 (67-113)||(7039-7084)
chr7 (67-113)||(10524415-10524460)
chr7 (67-113)||(42582085-42582130)
chr7 (67-113)||(42794166-42794211)
chr7 (71-113)||(45258066-45258107)
chr7 (385-475)||(45454196-45454285)
chr7 (67-113)||(46907509-46907554)
chr7 (71-113)||(49141680-49141721)
chr7 (211-276)||(27768-27833)
chr7 (221-262)||(11344531-11344572)
chr7 (309-361)||(15992248-15992298)
chr7 (333-414)||(16756006-16756087)
chr7 (43-84)||(40810561-40810602)
chr7 (360-421)||(48312202-48312262)
chr7 (58-87)||(48589858-48589887)
chr7 (67-112)||(49140627-49140671)
chr7 (73-113)||(8111-8150)
chr7 (64-112)||(19072408-19072455)
chr7 (214-278)||(38539688-38539752)
chr7 (209-249)||(44372741-44372781)
chr7 (209-249)||(44381597-44381637)
[»] chr8 (75 HSPs)
chr8 (195-585)||(45280919-45281306)
chr8 (195-477)||(4810467-4810744)
chr8 (187-411)||(32798434-32798658)
chr8 (194-413)||(32695174-32695394)
chr8 (193-408)||(44076267-44076483)
chr8 (194-380)||(42872124-42872308)
chr8 (195-408)||(42870811-42871025)
chr8 (191-409)||(30786670-30786888)
chr8 (195-408)||(32693828-32694039)
chr8 (220-413)||(6397806-6397997)
chr8 (223-413)||(42877645-42877832)
chr8 (192-422)||(13117525-13117754)
chr8 (309-422)||(24192555-24192666)
chr8 (193-368)||(41629704-41629877)
chr8 (195-408)||(8571522-8571735)
chr8 (212-423)||(22551022-22551231)
chr8 (194-307)||(26696529-26696642)
chr8 (195-304)||(32797136-32797245)
chr8 (195-373)||(30787542-30787718)
chr8 (223-373)||(42100048-42100196)
chr8 (193-307)||(28420180-28420294)
chr8 (194-411)||(42098560-42098777)
chr8 (194-307)||(28418803-28418916)
chr8 (315-422)||(20180566-20180671)
chr8 (195-243)||(12850465-12850513)
chr8 (194-262)||(41630175-41630243)
chr8 (233-327)||(6398483-6398577)
chr8 (220-373)||(45279703-45279854)
chr8 (195-327)||(212697-212830)
chr8 (195-327)||(239424-239557)
chr8 (195-327)||(726320-726453)
chr8 (195-327)||(792779-792912)
chr8 (195-327)||(798821-798954)
chr8 (195-280)||(8570116-8570201)
chr8 (333-422)||(9854772-9854860)
chr8 (360-472)||(416413-416525)
chr8 (223-423)||(14840790-14840989)
chr8 (385-477)||(26696689-26696780)
chr8 (194-380)||(13116327-13116511)
chr8 (311-413)||(31845696-31845795)
chr8 (214-307)||(211612-211705)
chr8 (214-307)||(240551-240644)
chr8 (214-307)||(725235-725328)
chr8 (214-307)||(793906-793999)
chr8 (333-406)||(10669353-10669426)
chr8 (360-472)||(37400942-37401054)
chr8 (332-380)||(42362684-42362732)
chr8 (223-412)||(38696334-38696522)
chr8 (195-293)||(13197961-13198059)
chr8 (358-472)||(14030478-14030592)
chr8 (211-280)||(17702308-17702377)
chr8 (314-422)||(24305160-24305266)
chr8 (363-472)||(36803117-36803226)
chr8 (360-472)||(1659147-1659258)
chr8 (360-472)||(6337094-6337206)
chr8 (372-444)||(34504544-34504616)
chr8 (298-380)||(42878764-42878846)
chr8 (67-113)||(44933829-44933874)
chr8 (336-413)||(43202234-43202311)
chr8 (64-112)||(7121841-7121888)
chr8 (44-87)||(38331023-38331066)
chr8 (67-113)||(2335206-2335251)
chr8 (67-113)||(27502623-27502668)
chr8 (211-293)||(38697026-38697108)
chr8 (71-113)||(43362293-43362334)
chr8 (307-375)||(17701050-17701116)
chr8 (67-112)||(28694049-28694093)
chr8 (68-113)||(31184563-31184607)
chr8 (67-112)||(39277519-39277563)
chr8 (345-406)||(40437504-40437565)
chr8 (223-292)||(45437503-45437572)
chr8 (223-307)||(17338067-17338151)
chr8 (333-413)||(22620019-22620099)
chr8 (193-261)||(23708801-23708869)
chr8 (64-112)||(39513242-39513289)
[»] chr2 (60 HSPs)
chr2 (194-585)||(6030198-6030589)
chr2 (195-413)||(11317268-11317486)
chr2 (193-436)||(42641738-42641980)
chr2 (195-413)||(11547657-11547875)
chr2 (195-411)||(17459251-17459468)
chr2 (193-411)||(32469144-32469363)
chr2 (187-399)||(43033072-43033282)
chr2 (193-347)||(7437727-7437881)
chr2 (195-373)||(17460626-17460802)
chr2 (198-380)||(43034404-43034586)
chr2 (189-324)||(28562798-28562933)
chr2 (223-406)||(29219411-29219595)
chr2 (223-406)||(29332710-29332894)
chr2 (223-414)||(18616904-18617096)
chr2 (197-306)||(28561368-28561477)
chr2 (191-366)||(11315927-11316100)
chr2 (223-411)||(1085290-1085476)
chr2 (195-373)||(32470517-32470693)
chr2 (9-87)||(41566107-41566184)
chr2 (199-276)||(7436469-7436546)
chr2 (233-408)||(34464004-34464178)
chr2 (233-420)||(34512850-34513034)
chr2 (7-87)||(41565372-41565451)
chr2 (223-364)||(1083014-1083153)
chr2 (211-351)||(2277432-2277571)
chr2 (333-423)||(34513444-34513534)
chr2 (198-289)||(36010578-36010669)
chr2 (336-422)||(8320895-8320981)
chr2 (193-246)||(6028741-6028794)
chr2 (360-472)||(40323095-40323207)
chr2 (67-113)||(29074061-29074106)
chr2 (340-422)||(30748621-30748703)
chr2 (211-351)||(34147150-34147289)
chr2 (333-414)||(4920958-4921039)
chr2 (67-112)||(29947738-29947782)
chr2 (360-472)||(2384330-2384442)
chr2 (340-380)||(16295151-16295191)
chr2 (333-413)||(28611154-28611233)
chr2 (64-112)||(33222587-33222634)
chr2 (333-413)||(34467641-34467721)
chr2 (360-472)||(36215013-36215124)
chr2 (356-411)||(35903665-35903720)
chr2 (211-278)||(37956963-37957030)
chr2 (67-113)||(3086006-3086051)
chr2 (67-113)||(10424809-10424854)
chr2 (223-261)||(18615542-18615580)
chr2 (67-113)||(30803076-30803121)
chr2 (67-113)||(36510914-36510959)
chr2 (64-105)||(37322166-37322205)
chr2 (71-113)||(39951212-39951253)
chr2 (58-87)||(4286691-4286720)
chr2 (209-246)||(23233763-23233800)
chr2 (64-112)||(2271792-2271839)
chr2 (43-87)||(4286148-4286192)
chr2 (64-112)||(14002490-14002537)
chr2 (333-444)||(30749194-30749305)
chr2 (223-307)||(34468984-34469068)
chr2 (64-112)||(40156370-40156417)
chr2 (59-87)||(40221121-40221149)
chr2 (69-113)||(41560010-41560054)
[»] chr5 (45 HSPs)
chr5 (191-586)||(27705057-27705438)
chr5 (193-413)||(22047728-22047949)
chr5 (197-413)||(39603853-39604070)
chr5 (193-406)||(30859078-30859292)
chr5 (193-413)||(325087-325305)
chr5 (194-405)||(30910738-30910950)
chr5 (198-321)||(39605461-39605584)
chr5 (211-413)||(8521269-8521468)
chr5 (211-413)||(1010267-1010466)
chr5 (195-369)||(30857798-30857970)
chr5 (194-423)||(22308690-22308918)
chr5 (309-413)||(1102731-1102833)
chr5 (197-380)||(15548240-15548421)
chr5 (337-413)||(11262532-11262608)
chr5 (194-373)||(33173901-33174079)
chr5 (195-307)||(22049142-22049254)
chr5 (196-256)||(41798004-41798064)
chr5 (223-372)||(8523687-8523836)
chr5 (223-373)||(30912104-30912252)
chr5 (338-380)||(1009325-1009367)
chr5 (211-351)||(32757839-32757978)
chr5 (360-472)||(27262581-27262692)
chr5 (360-472)||(31171014-31171126)
chr5 (360-455)||(28393375-28393470)
chr5 (46-87)||(4906868-4906909)
chr5 (333-373)||(324174-324214)
chr5 (64-112)||(30192463-30192510)
chr5 (69-112)||(204477-204520)
chr5 (67-113)||(5746-5791)
chr5 (67-113)||(3891453-3891498)
chr5 (67-113)||(3892495-3892540)
chr5 (43-81)||(17047010-17047048)
chr5 (67-113)||(30711218-30711263)
chr5 (67-112)||(8539574-8539618)
chr5 (197-266)||(11262256-11262325)
chr5 (67-112)||(11348533-11348577)
chr5 (353-422)||(13520691-13520760)
chr5 (359-412)||(20539248-20539301)
chr5 (223-280)||(26047839-26047896)
chr5 (385-421)||(223410-223446)
chr5 (210-246)||(324080-324116)
chr5 (68-116)||(19228705-19228753)
chr5 (194-246)||(34894146-34894198)
chr5 (67-107)||(35672063-35672102)
chr5 (64-112)||(41622144-41622191)
[»] chr4 (93 HSPs)
chr4 (195-528)||(52239875-52240209)
chr4 (193-478)||(15449910-15450195)
chr4 (192-414)||(2312380-2312603)
chr4 (195-407)||(1794409-1794622)
chr4 (198-419)||(27850831-27851047)
chr4 (194-399)||(11968508-11968713)
chr4 (194-413)||(6348152-6348369)
chr4 (199-413)||(6349449-6349667)
chr4 (223-411)||(7707614-7707803)
chr4 (194-414)||(1587179-1587398)
chr4 (195-373)||(393579-393756)
chr4 (198-373)||(52963570-52963743)
chr4 (197-402)||(42810115-42810319)
chr4 (194-306)||(24426336-24426448)
chr4 (194-356)||(1588045-1588208)
chr4 (342-477)||(7053321-7053456)
chr4 (195-326)||(390215-390346)
chr4 (196-373)||(1829752-1829928)
chr4 (194-325)||(2310920-2311051)
chr4 (193-324)||(42871091-42871222)
chr4 (195-351)||(1188841-1188996)
chr4 (194-324)||(37882831-37882963)
chr4 (193-291)||(1831285-1831383)
chr4 (194-321)||(4128990-4129117)
chr4 (195-351)||(44503642-44503796)
chr4 (194-364)||(40792748-40792914)
chr4 (314-413)||(56085465-56085562)
chr4 (309-423)||(44498574-44498686)
chr4 (214-413)||(53432079-53432277)
chr4 (195-327)||(37884263-37884395)
chr4 (7-78)||(26933205-26933275)
chr4 (337-455)||(49896443-49896561)
chr4 (197-327)||(27847678-27847808)
chr4 (338-444)||(28590774-28590880)
chr4 (223-351)||(10168745-10168873)
chr4 (306-413)||(19750195-19750300)
chr4 (306-413)||(19789506-19789611)
chr4 (195-307)||(44501516-44501628)
chr4 (214-412)||(53435655-53435852)
chr4 (223-406)||(23201872-23202055)
chr4 (307-413)||(26629902-26630005)
chr4 (309-421)||(52138686-52138799)
chr4 (336-422)||(13165633-13165718)
chr4 (193-307)||(31968398-31968512)
chr4 (195-307)||(1190198-1190310)
chr4 (195-307)||(53205489-53205601)
chr4 (333-408)||(4871629-4871704)
chr4 (231-413)||(40723262-40723442)
chr4 (223-373)||(52241098-52241245)
chr4 (385-475)||(42872169-42872258)
chr4 (198-304)||(42872308-42872414)
chr4 (223-325)||(54866619-54866720)
chr4 (46-87)||(33409577-33409618)
chr4 (46-87)||(33410207-33410248)
chr4 (195-307)||(4871370-4871482)
chr4 (64-112)||(18884559-18884606)
chr4 (360-472)||(22161596-22161708)
chr4 (360-472)||(23317143-23317255)
chr4 (360-472)||(25922219-25922331)
chr4 (333-413)||(26496210-26496290)
chr4 (225-351)||(33232662-33232785)
chr4 (194-309)||(49344013-49344129)
chr4 (220-308)||(54485550-54485638)
chr4 (333-412)||(4714155-4714234)
chr4 (309-423)||(36845523-36845634)
chr4 (195-351)||(11438531-11438686)
chr4 (67-113)||(14201585-14201630)
chr4 (67-113)||(21022946-21022991)
chr4 (223-364)||(23203904-23204043)
chr4 (69-113)||(47153427-47153472)
chr4 (333-400)||(22069370-22069437)
chr4 (342-421)||(36243663-36243742)
chr4 (342-421)||(56157389-56157468)
chr4 (333-406)||(8682756-8682829)
chr4 (360-410)||(23103913-23103962)
chr4 (67-113)||(31242185-31242230)
chr4 (197-307)||(31965835-31965945)
chr4 (67-113)||(40833668-40833713)
chr4 (43-81)||(43210439-43210477)
chr4 (67-113)||(46253456-46253501)
chr4 (67-113)||(51037526-51037571)
chr4 (336-373)||(7708730-7708767)
chr4 (194-307)||(10167422-10167535)
chr4 (67-112)||(20208481-20208525)
chr4 (211-276)||(38698065-38698130)
chr4 (214-307)||(53204378-53204471)
chr4 (68-112)||(15999858-15999902)
chr4 (64-112)||(37296240-37296287)
chr4 (385-421)||(38555172-38555208)
chr4 (64-112)||(48807441-48807488)
chr4 (67-107)||(50446984-50447023)
chr4 (233-351)||(50548188-50548303)
chr4 (233-309)||(54865141-54865216)
[»] scaffold0077 (2 HSPs)
scaffold0077 (194-414)||(54083-54304)
scaffold0077 (201-356)||(52596-52749)
[»] chr1 (70 HSPs)
chr1 (193-406)||(45584915-45585129)
chr1 (195-423)||(50444590-50444816)
chr1 (194-421)||(15072682-15072909)
chr1 (194-422)||(15232749-15232976)
chr1 (190-371)||(14470849-14471029)
chr1 (195-368)||(27814290-27814462)
chr1 (197-413)||(35943347-35943563)
chr1 (223-404)||(16965035-16965217)
chr1 (194-307)||(15071339-15071452)
chr1 (194-410)||(41873875-41874090)
chr1 (194-322)||(46111479-46111607)
chr1 (223-373)||(16963860-16964008)
chr1 (191-261)||(52627509-52627579)
chr1 (194-307)||(24499661-24499774)
chr1 (7-84)||(38633119-38633195)
chr1 (352-472)||(12665944-12666064)
chr1 (195-307)||(52628879-52628991)
chr1 (333-422)||(9226107-9226196)
chr1 (253-413)||(46110338-46110496)
chr1 (223-373)||(49802837-49802985)
chr1 (194-413)||(34351866-34352075)
chr1 (193-402)||(41872572-41872780)
chr1 (193-373)||(23091347-23091527)
chr1 (189-412)||(49801609-49801832)
chr1 (195-307)||(14477797-14477909)
chr1 (7-79)||(38632520-38632591)
chr1 (201-326)||(50442628-50442754)
chr1 (333-422)||(6049317-6049406)
chr1 (333-414)||(52078044-52078125)
chr1 (333-397)||(13147333-13147397)
chr1 (333-413)||(15746668-15746747)
chr1 (333-421)||(18821632-18821720)
chr1 (325-373)||(34350240-34350288)
chr1 (223-303)||(44278359-44278439)
chr1 (333-413)||(48527669-48527749)
chr1 (342-416)||(28050465-28050539)
chr1 (223-423)||(46467172-46467370)
chr1 (211-276)||(20069924-20069989)
chr1 (333-422)||(26802075-26802164)
chr1 (333-414)||(51445725-51445806)
chr1 (333-413)||(14478401-14478481)
chr1 (333-413)||(48096933-48097013)
chr1 (211-318)||(51042337-51042444)
chr1 (333-380)||(3617431-3617478)
chr1 (369-472)||(8027403-8027506)
chr1 (336-399)||(10722291-10722354)
chr1 (223-380)||(15233977-15234131)
chr1 (49-87)||(47586218-47586256)
chr1 (336-413)||(13894752-13894828)
chr1 (194-307)||(16123284-16123397)
chr1 (46-87)||(47585651-47585692)
chr1 (43-80)||(50268514-50268551)
chr1 (193-261)||(33369247-33369315)
chr1 (64-112)||(42290267-42290314)
chr1 (333-409)||(44999367-44999443)
chr1 (223-278)||(42244657-42244712)
chr1 (43-85)||(13535604-13535646)
chr1 (70-112)||(13761105-13761146)
chr1 (67-113)||(19914436-19914481)
chr1 (314-406)||(5612993-5613082)
chr1 (67-112)||(19915373-19915417)
chr1 (211-276)||(20064190-20064255)
chr1 (68-113)||(43011797-43011841)
chr1 (356-413)||(46318519-46318576)
chr1 (68-113)||(47652697-47652741)
chr1 (67-112)||(49429193-49429237)
chr1 (67-112)||(50036818-50036862)
chr1 (43-87)||(5845463-5845507)
chr1 (314-380)||(9482574-9482637)
chr1 (67-107)||(19161868-19161907)
[»] scaffold0031 (2 HSPs)
scaffold0031 (196-407)||(125137-125350)
scaffold0031 (195-425)||(123967-124194)
[»] chr3 (77 HSPs)
chr3 (194-412)||(38242417-38242635)
chr3 (195-419)||(12107874-12108101)
chr3 (194-373)||(40244184-40244360)
chr3 (194-325)||(18197144-18197275)
chr3 (233-406)||(10732036-10732209)
chr3 (193-406)||(3208480-3208693)
chr3 (194-364)||(53622659-53622830)
chr3 (193-351)||(53624325-53624481)
chr3 (194-373)||(38240903-38241079)
chr3 (223-413)||(26886298-26886488)
chr3 (195-408)||(34818084-34818295)
chr3 (196-380)||(34819218-34819401)
chr3 (194-307)||(50810840-50810953)
chr3 (194-307)||(50864911-50865024)
chr3 (310-422)||(35371020-35371132)
chr3 (223-380)||(3455558-3455715)
chr3 (223-413)||(41264553-41264743)
chr3 (193-309)||(36176510-36176627)
chr3 (220-423)||(42684899-42685101)
chr3 (188-307)||(37735297-37735416)
chr3 (193-307)||(53187555-53187668)
chr3 (194-263)||(3209981-3210050)
chr3 (192-305)||(37736089-37736202)
chr3 (194-307)||(50809418-50809531)
chr3 (194-307)||(50866331-50866444)
chr3 (191-378)||(53614208-53614395)
chr3 (194-347)||(53194837-53194989)
chr3 (195-408)||(53420317-53420527)
chr3 (198-307)||(18458663-18458772)
chr3 (336-419)||(10301072-10301155)
chr3 (307-408)||(14745106-14745205)
chr3 (233-444)||(28909477-28909685)
chr3 (313-378)||(27841645-27841710)
chr3 (194-307)||(40364316-40364429)
chr3 (312-472)||(48083343-48083501)
chr3 (360-472)||(3807834-3807945)
chr3 (200-290)||(18442255-18442345)
chr3 (200-290)||(19487329-19487419)
chr3 (190-280)||(24403232-24403322)
chr3 (222-324)||(40745455-40745557)
chr3 (332-413)||(10338872-10338953)
chr3 (333-421)||(7270458-7270546)
chr3 (360-472)||(44175728-44175840)
chr3 (198-309)||(23443461-23443572)
chr3 (360-455)||(33705349-33705444)
chr3 (194-260)||(12105287-12105353)
chr3 (67-113)||(19988429-19988474)
chr3 (240-445)||(36175306-36175509)
chr3 (67-113)||(50998738-50998783)
chr3 (339-380)||(11224776-11224817)
chr3 (43-84)||(18745948-18745989)
chr3 (273-373)||(26887497-26887595)
chr3 (46-83)||(40871179-40871216)
chr3 (220-272)||(8796354-8796406)
chr3 (268-371)||(10730956-10731057)
chr3 (223-373)||(35372101-35372248)
chr3 (333-413)||(49379837-49379917)
chr3 (67-106)||(4330769-4330807)
chr3 (64-107)||(7942060-7942102)
chr3 (360-455)||(37981533-37981627)
chr3 (192-307)||(53421767-53421882)
chr3 (208-254)||(10340028-10340074)
chr3 (67-113)||(11095142-11095187)
chr3 (67-113)||(16851096-16851141)
chr3 (67-113)||(26245305-26245350)
chr3 (67-112)||(24703473-24703517)
chr3 (198-307)||(41544663-41544772)
chr3 (360-445)||(44182426-44182511)
chr3 (336-413)||(53194513-53194590)
chr3 (66-106)||(4274063-4274102)
chr3 (68-112)||(9429908-9429952)
chr3 (333-413)||(13621055-13621135)
chr3 (64-112)||(19842475-19842522)
chr3 (67-107)||(34543194-34543233)
chr3 (70-106)||(34712209-34712245)
chr3 (64-112)||(50330583-50330630)
chr3 (196-280)||(55328338-55328422)
[»] scaffold0118 (1 HSPs)
scaffold0118 (211-414)||(43473-43677)
[»] chr6 (32 HSPs)
chr6 (195-412)||(7311626-7311842)
chr6 (194-413)||(29381630-29381849)
chr6 (233-406)||(17837652-17837825)
chr6 (193-371)||(6452453-6452631)
chr6 (191-293)||(34023880-34023982)
chr6 (193-413)||(18346650-18346870)
chr6 (297-380)||(5187555-5187638)
chr6 (220-413)||(12669746-12669938)
chr6 (233-425)||(23392250-23392443)
chr6 (196-368)||(7310275-7310445)
chr6 (193-293)||(34024084-34024183)
chr6 (223-364)||(32506976-32507116)
chr6 (195-307)||(232174-232284)
chr6 (190-261)||(27080917-27080988)
chr6 (193-312)||(6452280-6452399)
chr6 (193-306)||(15730036-15730150)
chr6 (233-366)||(23397303-23397434)
chr6 (333-406)||(11967351-11967424)
chr6 (197-289)||(27082168-27082261)
chr6 (223-307)||(6701406-6701490)
chr6 (333-413)||(11722921-11723001)
chr6 (197-265)||(27967097-27967165)
chr6 (68-119)||(31146336-31146387)
chr6 (193-287)||(233590-233684)
chr6 (223-325)||(5186594-5186696)
chr6 (369-472)||(13847764-13847866)
chr6 (67-113)||(2109487-2109532)
chr6 (67-113)||(13164315-13164360)
chr6 (67-113)||(25554675-25554720)
chr6 (43-80)||(1189112-1189149)
chr6 (43-80)||(32616698-32616735)
chr6 (233-325)||(17839127-17839219)
[»] scaffold0011 (1 HSPs)
scaffold0011 (223-413)||(127459-127648)
[»] scaffold0013 (1 HSPs)
scaffold0013 (297-413)||(32671-32787)
[»] scaffold1152 (2 HSPs)
scaffold1152 (526-590)||(1358-1422)
scaffold1152 (193-373)||(2417-2595)
[»] scaffold0078 (1 HSPs)
scaffold0078 (193-307)||(18808-18922)
[»] scaffold0034 (2 HSPs)
scaffold0034 (223-406)||(108539-108722)
scaffold0034 (194-408)||(109652-109864)
[»] scaffold0201 (1 HSPs)
scaffold0201 (191-410)||(21121-21339)
[»] scaffold1251 (1 HSPs)
scaffold1251 (211-351)||(1048-1187)
[»] scaffold0219 (1 HSPs)
scaffold0219 (333-422)||(8083-8171)
[»] scaffold2071 (1 HSPs)
scaffold2071 (343-423)||(572-652)
[»] scaffold0035 (1 HSPs)
scaffold0035 (360-472)||(83063-83175)
[»] scaffold0176 (1 HSPs)
scaffold0176 (68-112)||(653-696)
[»] scaffold0019 (1 HSPs)
scaffold0019 (211-307)||(61865-61961)
[»] scaffold0016 (1 HSPs)
scaffold0016 (67-113)||(69279-69324)


Alignment Details
Target: chr7 (Bit Score: 386; Significance: 0; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 7 - 590
Target Start/End: Original strand, 40811152 - 40811713
Alignment:
Q  7 tcgaagaatatgaaggtataatttcctcgacacttaaagtgccgatggattaaattgaatttcggcagttaactgccgaggaggcatttgagtaatttac 106  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||| || ||||||| ||||||||||||||||    
T  40811152 tcgaagaaaatgaaggtataatttcctcggcacttaa-gtgccgatggattaaattggattttggcagttaattgtcgaggagacatttgagtaatttac 40811250  T
Q  107 tggtgtgtcttaggctcttagccctcttcaatgtgtcaacagtaatcctcaaagcataatggggcaaagttgcattactgaattttaaggcttatttgat 206  Q
    || ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40811251 tg-tgtgtcttaggctcttagccctcatcaatgtgtcaacaacaatcctcaaagcataatggggcaaagttgcattactgaattttaaggcttatttgat 40811349  T
Q  207 ccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaat 306  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||                    ||||||||||||||||||||||| ||||||||    
T  40811350 ccaatggtccctcaaataatttcaagttttcattttggtcccacattt--------------------ccctcatattttcctccgtatactaaataaat 40811429  T
Q  307 catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  40811430 cctgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagattctattaatatttttaatttaaaccgtttgat 40811529  T
Q  407 cttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaacnnnnnnncccatttcttcatcttcactc 506  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||       |||||||||||||||||| ||    
T  40811530 cttttttattaaaagataattgttagatcatgaatgtctattgtatcttcctgtgagtcaacaacacttaactttttttcccatttcttcatcttcattc 40811629  T
Q  507 ctctcatctttatcatcttcttcatacaaactcatcaatcttcaaactcaacccaaaaaatccagcaaatcattaaaaaccaaa 590  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  40811630 ctctcatctttatcatcttcttcatacaaactcatcaatcttcaaactcaacccagaaaatccagcaaatcattaaaaaacaaa 40811713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 211 - 412
Target Start/End: Original strand, 32255003 - 32255205
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatg 310  Q
    |||||||||||||||||||||||||| ||||||||| || | |||||||||| ||  ||||| |||||||  ||||||||||| | |||||||||||  |    
T  32255003 tggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgtacattttgatccctcactttttcctccgtttgccaaataaatcccg 32255102  T
Q  311 acggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctt 409  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||  |||| |||| ||||||||||| ||    
T  32255103 acggttaagtttaaccccaaatgatgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatttcaaccgtttgatttt 32255202  T
Q  410 ttt 412  Q
    |||    
T  32255203 ttt 32255205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 198 - 411
Target Start/End: Complemental strand, 43460938 - 43460725
Alignment:
Q  198 ttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtatac 297  Q
    ||||||||| ||||| |||||||||| |||| || |||||||||||||| |||| |||||||||| ||  |||| ||||||||  ||||||||| | | |    
T  43460938 ttatttgattcaatgatccctcaaattatttgaagttttcattttggtcccacaattaataaaacgtacattttagtccctcactttttcctccatttgc 43460839  T
Q  298 caaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaa 397  Q
    |||||||||| | || ||||| |||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| ||  |||| |||||||    
T  43460838 caaataaatcctcacagttaagtttaactcaaattatgtctatggtggaccaactttaagagtggtccaccatagatcctattaattattttaatttaaa 43460739  T
Q  398 ccgtttgatctttt 411  Q
    || |||||||||||    
T  43460738 ccctttgatctttt 43460725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 405 - 571
Target Start/End: Original strand, 41078931 - 41079097
Alignment:
Q  405 atcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaacnnnnnnncccatttcttcatcttcac 504  Q
    ||||||||||||||||||| |||||||||||||| |||||  ||||||||||| ||||||||||||||||||||       ||||||||||||||||||     
T  41078931 atcttttttattaaaagatgattgttagatcatgcatgtctattgtatcttccggtgagtcaacaacacttaaccctttttcccatttcttcatcttcat 41079030  T
Q  505 tcctctcatctttatcatcttcttcatacaaactcatcaatcttcaaactcaacccaaaaaatccag 571  Q
     ||||||||||| ||||||||||||  |||| ||||||||||||||||||||||| | |||||||||    
T  41079031 ccctctcatcttcatcatcttcttcgcacaacctcatcaatcttcaaactcaacctagaaaatccag 41079097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 195 - 419
Target Start/End: Original strand, 47454335 - 47454557
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||| |||||||||||||||||||||  ||||||||||||| |||| |||||||||| ||  |||||||||||||  |||| || |||     
T  47454335 ggcttatttgatccagtggtccctcaaataatttcaagctttcattttggtcccacaattaataaaacgtacattttggtccctcaagtttttcttcgtt 47454434  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattt 394  Q
    | |||||||||||  |||  ||||||||||| | ||  ||||||||||| |||||||||||||||||||||||| |||| | |||| || || || ||||    
T  47454435 tgccaaataaatcccgactattaactttaactctaa--atgtctatggtagaccaaccttaagagtggtccatcgtagaccttattaattttattaattt 47454532  T
Q  395 aaaccgtttgatcttttttattaaa 419  Q
     ||||||||||| |||||| |||||    
T  47454533 taaccgtttgatttttttttttaaa 47454557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 190 - 322
Target Start/End: Complemental strand, 47456498 - 47456366
Alignment:
Q  190 tttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcct 289  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||  |||||||||||||| ||||| |    
T  47456498 tttaaggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtactttttggtccctcattttttctt 47456399  T
Q  290 ccgtataccaaataaatcatgacggttaacttt 322  Q
    | || | |||||||||||  ||| |||||||||    
T  47456398 ctgtttgccaaataaatctcgactgttaacttt 47456366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 195 - 373
Target Start/End: Complemental strand, 40509852 - 40509675
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||| | ||||||||||  |||||||||||| |||||||||||||| |||| |||||||||| || ||||  || |||||  |||||||||||     
T  40509852 ggcttatttgtttcaatggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgtt 40509753  T
Q  295 taccaaataaatcatgacg-gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    |||||||||||||||   | ||||| |||||||| ||  |||||||| ||||||||||||||||||||||||| ||||||    
T  40509752 taccaaataaatcattcggtgttaagtttaaccccaa--atgtctatagtggaccaaccttaagagtggtccaccataga 40509675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 189 - 371
Target Start/End: Original strand, 41078748 - 41078930
Alignment:
Q  189 ttttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcc 288  Q
    |||| ||||||||| |||||  ||||||||||| ||||||| | |||||||||||||| |||| || ||||||  ||| ||||| ||| | | |||||||    
T  41078748 tttttaggcttattagatccgctggtccctcaattaatttccatttttcattttggtcccacaattgataaaaagtatcttttgatcctttagattttcc 41078847  T
Q  289 tccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcata 371  Q
    ||| | | || ||||||||  ||||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||| ||||    
T  41078848 tccatttgccgaataaatcccgacggttaactttaacccaaatgatgtatatggtggaccaatcttaaaaatggtccaccata 41078930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 195 - 367
Target Start/End: Complemental strand, 32256513 - 32256343
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| || | |||||||||  ||  |||||||||||||  ||||||||| |     
T  32256513 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccataattaataaaatgtaccttttggtccctcactttttcctccatt 32256414  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 367  Q
    | ||||||||||    || ||||||||||||   ||  ||||||||||||||||||| |||| ||||||||||    
T  32256413 tgccaaataaattccaaccgttaactttaacttcaa--atgtctatggtggaccaacattaaaagtggtccat 32256343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 333 - 472
Target Start/End: Complemental strand, 669369 - 669231
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttag 432  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||| || || || |||||||||||||||||||||||| |||||||||| ||||||    
T  669369 atgtctatggtggaccatc-ttaagagtggtccaccatagatcctattaattttgttaatttaaaccgtttgatcttttttaataaaagataactgttag 669271  T
Q  433 atcatgaatgtccgttgtatcttcccgtgagtcaacaaca 472  Q
    |||||| ||||   ||||||||| |  ||| |||||||||    
T  669270 atcatgcatgtttattgtatcttacaatgaatcaacaaca 669231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 233 - 402
Target Start/End: Complemental strand, 13564319 - 13564150
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaat 331  Q
    |||||||||||||| |||| ||||||||||    ||||| |||||||| |||||||||||| | |||||||||||  |||| |||| |||||||| ||||    
T  13564319 ttttcattttggtcccacaattaataaaactggcgttttagtccctcacattttcctccgtttgccaaataaatcccgacg-ttaagtttaaccccaaat 13564221  T
Q  332 gatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtt 402  Q
     |||||||||||||| || |||||||||||||||| ||||||||||||| ||  |||| |||| |||||||    
T  13564220 aatgtctatggtggatcatccttaagagtggtccaccatagatcctattaattattttaatttgaaccgtt 13564150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 195 - 373
Target Start/End: Complemental strand, 22115283 - 22115105
Alignment:
Q  195 ggcttatttgatccaatggtccc-tcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||| | |||||||||| | |||||||||||| |||||||||||||| |||| |||||||||| || ||||  || |||||  |||||||||||    
T  22115283 ggcttatttgtttcaatggtcccctaaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgt 22115184  T
Q  294 ataccaaataaatcatgacg-gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
      |||||||||||| |   | ||||| |||||||| ||  |||||||| ||||||||||||||||||||||||| ||||||    
T  22115183 tnaccaaataaatcnttcggtgttaagtttaaccccaa--atgtctatagtggaccaaccttaagagtggtccaccataga 22115105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 196 - 327
Target Start/End: Complemental strand, 45455489 - 45455358
Alignment:
Q  196 gcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtat 295  Q
    ||||||||||||| ||||||||| || |||||||||||||||||||||||| |||| |||||||||| ||  ||||| |||||||  |||| |||||| |    
T  45455489 gcttatttgatccgatggtcccttaattaatttcaaattttcattttggtcccacaattaataaaacgtacattttgatccctcacttttttctccgttt 45455390  T
Q  296 accaaataaatcatgacggttaactttaaccc 327  Q
     |||||||||||||| | ||||| ||||||||    
T  45455389 gccaaataaatcatggctgttaagtttaaccc 45455358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 194 - 373
Target Start/End: Complemental strand, 6173569 - 6173393
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||  | || | |||||||||| ||  |||||||||||||  |||||||||||    
T  6173569 aggcttatttgatccaatggtccctcaaataatttcaagttttcattttgtacccataattaataaaacgtacattttggtccctcactttttcctccgt 6173470  T
Q  294 ataccaaataaat-catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
     | |||||||||| |||  |  ||||||||||| | ||  || ||||| |||||||||| |||| ||||||||||| ||||    
T  6173469 ttgccaaataaatccat--ctattaactttaactctaa--atatctatagtggaccaactttaaaagtggtccatcgtaga 6173393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 33096866 - 33096979
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||| | | |||| |||||||||| ||  |||||||||||||  |||||||||||    
T  33096866 aggcttatttgatccaatggtccctcaaataatttcaagttctcattttaggcccacaattaataaaacttaccttttggtccctcactttttcctccgt 33096965  T
Q  294 ataccaaataaatc 307  Q
     | |||||||||||    
T  33096966 ttgccaaataaatc 33096979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 195 - 421
Target Start/End: Original strand, 47059106 - 47059334
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||| ||| ||||||||||  || |||||| || ||||||||||||||  ||| |||||||||  || |||||| |||||||  |||||||||||     
T  47059106 ggcttattagattcaatggtcccctaattaattttaagttttcattttggtcctacaattaataaaatgtacgttttgatccctcactttttcctccgtt 47059205  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattca--tatttttgat 392  Q
    | ||||||||||| |||| ||||| ||||||||     | |||||||||||| ||||||||||||| | ||| |||||| | |||| |  | ||||| ||    
T  47059206 tgccaaataaatcctgaccgttaagtttaaccctccaaaagtctatggtggagcaaccttaagagtagcccaccatagaccttattaatttttttttaat 47059305  T
Q  393 ttaaaccgtttgatcttttttattaaaag 421  Q
    |||||||||||||||| |||  |||||||    
T  47059306 ttaaaccgtttgatctgtttatttaaaag 47059334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 196 - 422
Target Start/End: Original strand, 40508377 - 40508602
Alignment:
Q  196 gcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtat 295  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||| ||| |||| |||||||||| || ||||  ||||||||  |||||||||||      
T  40508377 gcttatttgatccaatggtcccctaaataatttcaagttttcatttttgtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgtta 40508476  T
Q  296 accaaataaatcatgacg-gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattt 394  Q
     ||||||||||| |   | ||||| ||||| || ||  |||||||||||||| ||| ||||||||| ||||| |||||||   ||| || ||||  ||||    
T  40508477 gccaaataaatccttcggtgttaagtttaatcccaa--atgtctatggtggatcaatcttaagagttgtccaccatagatttcattaattttttaaattt 40508574  T
Q  395 aaaccgtttgatcttttttattaaaaga 422  Q
     ||||||||||| | |||| ||||||||    
T  40508575 taaccgtttgatatgtttttttaaaaga 40508602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 190 - 373
Target Start/End: Original strand, 43459448 - 43459629
Alignment:
Q  190 tttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcct 289  Q
    |||| ||||||||||||||| | |||||  |||||||||||| |||||||||||||| |||| |||||||||| |  ||||  ||||||||| |||||||    
T  43459448 tttatggcttatttgatccattagtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtgcgtttaagtccctcatgttttcct 43459547  T
Q  290 ccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    |||| | |||||||||||  | | ||||| |||||| | ||  |||||||||||||| ||||||||| | |||| |||| ||||    
T  43459548 ccgtttgccaaataaatctcggctgttaagtttaactccaa--atgtctatggtggatcaaccttaaaaatggtacatcgtaga 43459629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 191 - 378
Target Start/End: Complemental strand, 11502544 - 11502356
Alignment:
Q  191 ttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctc 290  Q
    |||||||||||| ||||   |||||| | || ||||||||  ||||||||||| || ||||||||||||||  |  |  || ||||||||  |||| |||    
T  11502544 ttaaggcttattagatcgtttggtcctttaactaatttcatgttttcattttgatcccacatttaataaaaattgcgaattagtccctcaacttttgctc 11502445  T
Q  291 cgtataccaaataaatcatgacggttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccatcatagatccta 378  Q
     || | |||||||||||   || ||||| ||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  11502444 tgtttgccaaataaatcccaacagttaagtttaacctcaaatgatgtctatggtagaccaaccttaagagtggtccaccatagatccta 11502356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 306 - 408
Target Start/End: Original strand, 35295809 - 35295909
Alignment:
Q  306 tcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttga 405  Q
    ||||||| |||||||||||||| ||  || ||| ||||||||||||||||||||||||||| ||||||||||||| ||  |||| |||||||||||||||    
T  35295809 tcatgaccgttaactttaaccccaa--atatctgtggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttga 35295906  T
Q  406 tct 408  Q
    |||    
T  35295907 tct 35295909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 314 - 423
Target Start/End: Original strand, 2414863 - 2414970
Alignment:
Q  314 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||| ||  ||||||||  |||||||||||||| ||||||||| ||||||||||||| || || || |||||||||||||||  ||||||    
T  2414863 gttaactttaaccccaa--atgtctataatggaccaaccttaaaagtggtccaccatagatcctattaattttcttaatttaaaccgtttgaattttttt 2414960  T
Q  414 attaaaagat 423  Q
    ||||||||||    
T  2414961 attaaaagat 2414970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 30310118 - 30310231
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||||| |||||| |||||||||||| |||||||||| ||| |||| |||||||||| ||  |||  || |||||| |||||||||||    
T  30310118 aggcttatttgatccaatagtcccttaaataatttcaagttttcatttttgtcccacaattaataaaacgtacatttgagttcctcattttttcctccgt 30310217  T
Q  294 ataccaaataaatc 307  Q
     | |||||||||||    
T  30310218 ttgccaaataaatc 30310231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 32602930 - 32603043
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||| |||||| |||||||||||||| |||| ||||||||| || | |||||||||| || ||||| ||||||||  |||| ||||||    
T  32602930 aggcttatttgatccattggtccttcaaataatttcaagtttttattttggtcccataattaataaaacgtacgttttagtccctcactttttactccgt 32603029  T
Q  294 ataccaaataaatc 307  Q
     | |||||||||||    
T  32603030 ttgccaaataaatc 32603043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 45454035 - 45454148
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||  |||||||||  || ||||||||  ||||||||||||||||| | ||||||||||||| ||||| ||||||||  |||||||||||    
T  45454035 aggcttatttgattaaatggtcccctaattaatttcacgttttcattttggtctcataattaataaaacatacgttttagtccctcactttttcctccgt 45454134  T
Q  294 ataccaaataaatc 307  Q
     | |||||||||||    
T  45454135 ttgccaaataaatc 45454148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 195 - 373
Target Start/End: Complemental strand, 4300166 - 4299989
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||||| |||||   ||||||||||| |||||||||||||| |||| |||||||||| || ||||  ||||||||  |||||||| ||     
T  4300166 ggcttatttgatccaatcgtcccctgaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcactttttcctctgtt 4300067  T
Q  295 taccaaataaatcatgacg-gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    | ||||||||||| |   | ||||| |||||||| ||  | |||||| ||||| ||||||||||||||| ||| ||||||    
T  4300066 tgccaaataaatctttcggtgttaagtttaaccccaa--acgtctatagtggatcaaccttaagagtggcccaccataga 4299989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 315 - 422
Target Start/End: Original strand, 44372848 - 44372953
Alignment:
Q  315 ttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 414  Q
    ||||||||||||| ||  |||||||| |||||| ||| |||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||||||||||     
T  44372848 ttaactttaaccctaa--atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatcttttttc 44372945  T
Q  415 ttaaaaga 422  Q
    ||||||||    
T  44372946 ttaaaaga 44372953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 315 - 422
Target Start/End: Original strand, 44381704 - 44381809
Alignment:
Q  315 ttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 414  Q
    ||||||||||||| ||  |||||||| |||||| ||| |||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||||||||||     
T  44381704 ttaactttaaccctaa--atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatcttttttc 44381801  T
Q  415 ttaaaaga 422  Q
    ||||||||    
T  44381802 ttaaaaga 44381809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 195 - 286
Target Start/End: Complemental strand, 30311587 - 30311496
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatatttt 286  Q
    ||||||||||||||| | |||||  ||||||||||||||||||||||||||| |||| ||||||||||||| ||||  ||||||||| ||||    
T  30311587 ggcttatttgatccattagtcccctaaataatttcaaattttcattttggtcccacaattaataaaacatacgtttaagtccctcatttttt 30311496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 205 - 399
Target Start/End: Complemental strand, 41079942 - 41079751
Alignment:
Q  205 atccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataa 304  Q
    ||||| ||||||||||| ||||||| | |||| ||||||||| |||| | |||||||| || |||||||||||| || ||||||||||| | | ||||||    
T  41079942 atccattggtccctcaattaatttccattttttattttggtcccacaat-aataaaacgtacgttttggtcccttatcttttcctccgtttgctaaataa 41079844  T
Q  305 atcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaacc 399  Q
    |||   || |||||||||||| | ||  || ||||||||||| |||| |||| ||||||||||| |||| | |||| || || ||||||| ||||    
T  41079843 atccctaccgttaactttaactccaa--atatctatggtggaacaacattaaaagtggtccatcgtagaccttattaattttgttgattttaacc 41079751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 333 - 444
Target Start/End: Original strand, 46201266 - 46201377
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttag 432  Q
    |||||||||||| ||||||||||||||||||||| |||||||| |||| ||  |||| || ||||| |||||| ||||||||||||||||  |  |||||    
T  46201266 atgtctatggtgaaccaaccttaagagtggtccaccatagatcatattaattattttaatataaactgtttgaccttttttattaaaagagtaccgttag 46201365  T
Q  433 atcatgaatgtc 444  Q
    |||||| |||||    
T  46201366 atcatgcatgtc 46201377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 233 - 402
Target Start/End: Original strand, 22336015 - 22336184
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaat 331  Q
    |||||||||||||| |||| |||||||||     ||||| ||||||||  |||||||| || | |||||||||||  ||  ||||| |||||||| ||||    
T  22336015 ttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctcagtttgccaaataaatcccgaatgttaagtttaaccccaaat 22336114  T
Q  332 gatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtt 402  Q
    |||| |||||||||| ||||||||| ||||||||| ||||||||||||| ||  |||| |||| |||||||    
T  22336115 gatg-ctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtt 22336184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 308
Target Start/End: Original strand, 30333299 - 30333396
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatca 308  Q
    |||||||  |||||||||||| |||||||||||||| |||| |||||||||| ||| |||||||||||||| |||| |||||| |  |||||||||||    
T  30333299 tggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcatttttttctccgtttgtcaaataaatca 30333396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 194 - 365
Target Start/End: Complemental strand, 33779203 - 33779036
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||| | |||||  |||||||||||| |||||||||||| | |||| ||||||||||  | ||||| |||||||   ||||||||||     
T  33779203 aggcttatttgatccattagtcccctaaataatttcaagttttcattttggccccacaattaataaaactcacgttttagtccctcgctttttcctccg- 33779105  T
Q  294 ataccaaataaatc-atgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcc 365  Q
       || ||||||||  || | ||||| |||||||  ||  |||||||||||||||||||||||||||||||||    
T  33779104 --ccccaataaatctttggctgttaagtttaaccacaa--atgtctatggtggaccaaccttaagagtggtcc 33779036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 314 - 414
Target Start/End: Original strand, 22537675 - 22537776
Alignment:
Q  314 gttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttt 412  Q
    ||||| ||||||| |||||||||| || |||| ||||||||||| |||| |||| ||||||||||||| ||  |||| |||||||||||||||| |||||    
T  22537675 gttaattttaacctcaaatgatgtttacggtgaaccaaccttaatagtgatccaccatagatcctattaattattttaatttaaaccgtttgattttttt 22537774  T
Q  413 ta 414  Q
    ||    
T  22537775 ta 22537776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 309 - 413
Target Start/End: Original strand, 43441459 - 43441561
Alignment:
Q  309 tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 408  Q
    ||||||||||||||||||| ||  |||||||||||| ||||||||||||||||||||| ||||  ||||||| ||  |||| || ||||| ||||||| |    
T  43441459 tgacggttaactttaaccctaa--atgtctatggtgtaccaaccttaagagtggtccaccataagtcctattaattattttaatgtaaactgtttgatat 43441556  T
Q  409 ttttt 413  Q
    |||||    
T  43441557 ttttt 43441561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 223 - 373
Target Start/End: Complemental strand, 22538938 - 22538790
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  ||||| |||||||| |||| |||||||||   | ||||| ||||||||| ||||||||||| | |||||||||||  |||||||||||||    
T  22538938 taatttcatgttttctttttggtcccacaattaataaaaatgacgttttagtccctcatcttttcctccgtttgccaaataaatctcgacggttaacttt 22538839  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    ||| | ||  || ||||||||| |||||| |||| || |||| ||| ||||    
T  22538838 aactccaa--atatctatggtgtaccaacattaaaagcggtctatcgtaga 22538790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 223 - 390
Target Start/End: Complemental strand, 40812703 - 40812538
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||||||||||||  || | |||||||||| || |||||| ||||||||||||||||| || |  |||||| |||  ||| ||| |||||    
T  40812703 taatttcatgttttcattttggttccataattaataaaacgtacgttttgctccctcatattttcctctgtttgtcaaatatatcccgactgtttacttt 40812604  T
Q  323 aac-ccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttg 390  Q
    ||| |||||| |   | |||||||||||||||||| |||| |||||| |||||| |||| || ||||||    
T  40812603 aactccaaataa---ccatggtggaccaaccttaaaagtgatccatcgtagatcttattaatttttttg 40812538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 427
Target Start/End: Original strand, 46835669 - 46835905
Alignment:
Q  191 ttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctc 290  Q
    |||||| |||| |||||||||||||||| |||||||||||||||||| |||| |||  ||| |||||||||  ||| |||  ||| ||||  ||||||||    
T  46835669 ttaaggtttatatgatccaatggtcccttaaataatttcaaattttctttttagtcctacaattaataaaatgtatttttaagtctctcaatttttcctc 46835768  T
Q  291 cgtataccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatattttt 389  Q
     || |  ||||||||||  ||  ||||| ||||| |||||||||||| ||||||||| ||  |||||   ||||| | |||| |||||||| ||  ||||    
T  46835769 tgtttgtcaaataaatctcga-agttaagtttaaccccaaatgatgtttatggtggatcattcttaaagttggtctaccatatatcctattaattatttt 46835867  T
Q  390 gatttaaaccgtttgatcttttttattaaaagataatt 427  Q
     |||||||| | || || ||| || |||||||| ||||    
T  46835868 aatttaaactgattaatttttatttttaaaagagaatt 46835905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 197 - 351
Target Start/End: Complemental strand, 24283091 - 24282939
Alignment:
Q  197 cttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtata 296  Q
    ||||||||||||  |||| |  |||||||||||| ||||||||||||||  |||| |||| ||||||   | ||| |||||||| |||||||||||| |     
T  24283091 cttatttgatccgttggttctccaaataatttcagattttcattttggttccacaattaa-aaaacaggcgctttagtccctcacattttcctccgtttg 24282993  T
Q  297 ccaaataaat-catgacggttaactttaacccaaatgatgtctatggtggaccaac 351  Q
    |||||||||| ||||   |||||||||||||| ||  |||||||||||||| ||||    
T  24282992 ccaaataaatccatgggtgttaactttaaccccaa--atgtctatggtggatcaac 24282939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 4298710 - 4298825
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||||||||||||||  ||||||||| || |||| |||||| || |||| |||||||||  |  ||||  ||||||||  |||||||| ||    
T  4298710 aggcttatttgatccaatggtcccctaaataattttaagtttttattttgatcccacaattaataaaatgtgggtttaagtccctcactttttcctctgt 4298809  T
Q  294 ataccaaataaatcat 309  Q
     | |||||||||||||    
T  4298810 ttgccaaataaatcat 4298825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 413
Target Start/End: Complemental strand, 30334755 - 30334543
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||| | |||||| |||||||  || ||||||||| |||||||||| ||| |||| |||||||||| ||  |||||||||||||    | |||||||     
T  30334755 ggcttaatagatccattggtcccctaactaatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctca----tccctccgtt 30334660  T
Q  295 taccaaataaa-tcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
    | ||||||||| ||   || ||||| | |||| | ||  |||||||||| |||||||| ||||||   ||||| ||||||||||||| || ||||| |||    
T  30334659 tgccaaataaattccaaaccgttaaatctaactctaa--atgtctatggaggaccaactttaagaacagtccaccatagatcctattaat-tttttaatt 30334563  T
Q  394 taaaccgtttgatctttttt 413  Q
    ||||||||| ||| ||||||    
T  30334562 taaaccgttagatttttttt 30334543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 373
Target Start/End: Complemental strand, 47060565 - 47060417
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    |||||| || ||||||||||||||  | | |||||||||| || ||||||||||||||   |||  ||||| | |||||||||||  ||| ||||| |||    
T  47060565 taattttaagttttcattttggtcctataattaataaaacgtacgttttggtccctcacccttttttccgtttgccaaataaatccggactgttaagttt 47060466  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    ||| | ||  |||| ||||||||||||||||||||| | ||||| ||||||    
T  47060465 aacaccaa--atgtatatggtggaccaaccttaagaatagtccaccataga 47060417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 223 - 363
Target Start/End: Original strand, 11501206 - 11501344
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatg-ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactt 321  Q
    ||||||||  |||||||||||||| |||| ||||||||| |||   |||| ||||||||  ||||||||| | | |||||||||||  ||| ||||||||    
T  11501206 taatttcatgttttcattttggtcccacagttaataaaa-atagcattttagtccctcaccttttcctccatttgccaaataaatcccgactgttaactt 11501304  T
Q  322 taacccaaatgatgtctatggtggaccaaccttaagagtggt 363  Q
    ||||   ||  |||||||||||||||||||||||| ||||||    
T  11501305 taacttcaa--atgtctatggtggaccaaccttaaaagtggt 11501344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 38857236 - 38857159
Alignment:
Q  7 tcgaagaatatgaaggtataatttcctcgacacttaaagtgccgatggattaaattgaatttcggcagttaactgccga 85  Q
    |||||||| |||||| ||| ||||||||| ||||||| |||||||  |||||||||| | |||||||||||||||||||    
T  38857236 tcgaagaaaatgaagttatgatttcctcggcacttaa-gtgccgaaagattaaattggacttcggcagttaactgccga 38857159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 38857891 - 38857963
Alignment:
Q  9 gaagaatatgaaggtataatttcctcgacacttaaagtgccgatggattaaattgaatttcggcagttaactgc 82  Q
    |||||| |||||| ||| ||||||||| ||||||| ||||||||||||||||||| | |||| |||||||||||    
T  38857891 gaagaaaatgaagttatgatttcctcggcacttaa-gtgccgatggattaaattggacttcgacagttaactgc 38857963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 472
Target Start/End: Original strand, 5095228 - 5095340
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  5095228 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 5095327  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  5095328 tgaaccaacaaca 5095340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 472
Target Start/End: Original strand, 24051365 - 24051477
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  24051365 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 24051464  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  24051465 tgaaccaacaaca 24051477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 472
Target Start/End: Original strand, 39752318 - 39752422
Alignment:
Q  368 catagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaa 467  Q
    |||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | ||||  |||    
T  39752318 catagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactgtgaaccaa 39752417  T
Q  468 caaca 472  Q
    |||||    
T  39752418 caaca 39752422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 413
Target Start/End: Original strand, 41328354 - 41328434
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||| |||| |||| | ||||||| ||||||||||||| ||  || | |||||||||||||||| ||||||    
T  41328354 atgtctatggtggaacaactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatatttttt 41328434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 13921322 - 13921367
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||    
T  13921322 ttcggcagttaactgccgagga-gcatttgagtaatttactcgtgtg 13921367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 411
Target Start/End: Original strand, 39981452 - 39981530
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttt 411  Q
    ||||||||||||||||||| |||| | ||||||| ||||||||| ||| ||  || | |||||||||||||||| ||||    
T  39981452 atgtctatggtggaccaactttaaaaatggtccaccatagatccaattaattattctaatttaaaccgtttgatttttt 39981530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 40810546 - 40810496
Alignment:
Q  69 cggcagttaactgccgaggaggcatttgagtaatttactggtgtgtcttag 119  Q
    |||||||||||||| |||| ||||||| |||||| ||||||||||||||||    
T  40810546 cggcagttaactgctgagggggcatttaagtaatatactggtgtgtcttag 40810496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 35195 - 35130
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtcc 276  Q
    |||||||| |||||||||| |||||||||||||||| || || ||||||||   ||||||||||||    
T  35195 tggtcccttaaataatttccaattttcattttggtcccatatctaataaaagtcatgttttggtcc 35130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 12210648 - 12210687
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttact 107  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  12210648 ttcggcagttaactgccgagg-ggcatttgagtaatttact 12210687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 14101466 - 14101419
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  14101466 aatttcggcagttaactgccaagg-ggcatttgagtaatttactcgtgt 14101419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 14411483 - 14411436
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  14411483 aatttcggcagttaactgccaagg-ggcatttgagtaatttactcgtgt 14411436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 273 - 356
Target Start/End: Complemental strand, 22337411 - 22337330
Alignment:
Q  273 gtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaa 356  Q
    |||||| | |||||||||||| | ||||||||||| |||| ||||| ||||||   ||  ||||||||||||||||||||||||    
T  22337411 gtcccttacattttcctccgtttgccaaataaatcctgaccgttaaatttaacttcaa--atgtctatggtggaccaaccttaa 22337330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 34139728 - 34139771
Alignment:
Q  68 tcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  34139728 tcggcagttaactgccgagg-ggcatttgagtaatttactcgtgt 34139771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 534165 - 534118
Alignment:
Q  214 tccctcaaataatttcaaattttcattttggtctcacatttaataaaa 261  Q
    ||||| || ||||||||  |||||||||||||||||||||||||||||    
T  534165 tcccttaattaatttcatcttttcattttggtctcacatttaataaaa 534118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 537331 - 537378
Alignment:
Q  214 tccctcaaataatttcaaattttcattttggtctcacatttaataaaa 261  Q
    ||||| || ||||||||  |||||||||||||||||||||||||||||    
T  537331 tcccttaattaatttcatcttttcattttggtctcacatttaataaaa 537378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 14102403 - 14102445
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttact 107  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  14102403 aatttcggcagttaactgtcgagg-ggcatttgagtaatttact 14102445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 14412420 - 14412462
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttact 107  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  14412420 aatttcggcagttaactgtcgagg-ggcatttgagtaatttact 14412462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 30846850 - 30846904
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgtgtcttag 119  Q
    |||||||||||||||||| ||||| || |||||||||||||||| |||| ||||||    
T  30846850 aatttcggcagttaactgtcgagg-ggtatttgagtaatttactcgtgtttcttag 30846904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 48590314 - 48590357
Alignment:
Q  43 aagtgccgatggattaaattgaatttcggcagttaactgccgag 86  Q
    ||||| |||||| | |||||||||||||||||||||||||||||    
T  48590314 aagtgtcgatgggtgaaattgaatttcggcagttaactgccgag 48590357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 7084 - 7039
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  7084 ttcggtagttaactgccgagg-ggcatttgagtaatttactcgtgtg 7039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 10524415 - 10524460
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||    
T  10524415 ttcgacagttaactgccgagg-ggcatttgagtaatttactcgtgtg 10524460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 42582130 - 42582085
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||    
T  42582130 ttcggcagttaactgccgagg-gacatttgagtaatttactcgtgtg 42582085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 42794211 - 42794166
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  42794211 ttcggcagttatctgccgaggag-catttgagtaatttactcgtgtg 42794166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 45258066 - 45258107
Alignment:
Q  71 gcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  45258066 gcagttaactgccgagg-ggcatttgagtaatttactcgtgtg 45258107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 385 - 475
Target Start/End: Original strand, 45454196 - 45454285
Alignment:
Q  385 tttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacactt 475  Q
    ||||| |||||| ||||||||||||||| |||||||||  || ||||||| ||| || ||   |||||||| || ||||||||||||||||    
T  45454196 tttttaatttaagccgtttgatctttttaattaaaagaggatcgttagattatgcatatctactgtatctt-ccatgagtcaacaacactt 45454285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 46907554 - 46907509
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||    
T  46907554 ttcggcagttaactgccgaag-ggcatttgagtaatttactcgtgtg 46907509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 49141680 - 49141721
Alignment:
Q  71 gcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||| ||||||||||||||||||| |||||    
T  49141680 gcagttaactgccgagg-ggcatttgagtaatttactcgtgtg 49141721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 27768 - 27833
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtcc 276  Q
    |||||||| |||||||||| |||||||||||||||  || || ||||||||   ||||||||||||    
T  27768 tggtcccttaaataatttccaattttcattttggttccatatctaataaaagtcatgttttggtcc 27833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 11344531 - 11344572
Alignment:
Q  221 aataatttcaaattttcattttggtctcacatttaataaaac 262  Q
    ||||||||||| |||||||||||||| |||| ||||||||||    
T  11344531 aataatttcaagttttcattttggtcccacaattaataaaac 11344572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 361
Target Start/End: Original strand, 15992248 - 15992298
Alignment:
Q  309 tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtg 361  Q
    |||| |||||||||||||  ||  |||||||||||||||||||||||||||||    
T  15992248 tgactgttaactttaacctcaa--atgtctatggtggaccaaccttaagagtg 15992298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 414
Target Start/End: Original strand, 16756006 - 16756087
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 414  Q
    |||||||||||| | ||||||||| ||| ||| | ||||||||||||| ||  |||| |||| |||| |||||| |||||||    
T  16756006 atgtctatggtgaaacaaccttaaaagttgtctaccatagatcctattaattattttaattttaaccatttgatttttttta 16756087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 40810602 - 40810561
Alignment:
Q  43 aagtgccgatggattaaattgaatttcggcagttaactgccg 84  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||    
T  40810602 aagtgccgatggattaaattggatttcggaagttacctgccg 40810561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 421
Target Start/End: Original strand, 48312202 - 48312262
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaag 421  Q
    ||||||| ||||||||||||| || ||||| |||||||  |||||||||||||| |||||||    
T  48312202 tggtccaccatagatcctattaat-tttttaatttaaatggtttgatctttttttttaaaag 48312262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 87
Target Start/End: Complemental strand, 48589887 - 48589858
Alignment:
Q  58 aaattgaatttcggcagttaactgccgagg 87  Q
    ||||||||||||||||||||||||||||||    
T  48589887 aaattgaatttcggcagttaactgccgagg 48589858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 49140671 - 49140627
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||    
T  49140671 ttcggcagttaactgccgagg-ggtatttgagtaatttactcgtgt 49140627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 8111 - 8150
Alignment:
Q  73 agttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  8111 agttaactgccgagg-ggcatttgagtaatttacttgtgtg 8150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 19072455 - 19072408
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||| |||||||||||| ||||| ||||||||||||||||||| ||||    
T  19072455 aattttggcagttaactgtcgagg-ggcatttgagtaatttactcgtgt 19072408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 38539688 - 38539752
Alignment:
Q  214 tccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccct 278  Q
    ||||| || ||||||||| |||||||||||||| || |  |||||||||  ||||||||||||||    
T  38539688 tcccttaattaatttcaagttttcattttggtcccataaataataaaactcatgttttggtccct 38539752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 44372741 - 44372781
Alignment:
Q  209 aatggtccctcaaataatttcaaattttcattttggtctca 249  Q
    ||||||||||||| ||||||| | |||||||||||||||||    
T  44372741 aatggtccctcaactaatttcgagttttcattttggtctca 44372781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 44381597 - 44381637
Alignment:
Q  209 aatggtccctcaaataatttcaaattttcattttggtctca 249  Q
    ||||||||||||| ||||||| | |||||||||||||||||    
T  44381597 aatggtccctcaactaatttcgagttttcattttggtctca 44381637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 181; Significance: 2e-97; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 195 - 585
Target Start/End: Complemental strand, 45281306 - 45280919
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||  ||| ||||||||| |||||||||| ||| ||| |||||||||| |     
T  45281306 ggcttatttgatccaatagtccctcaaataatttcaagttttcattttggtccaacaattaataaaa-atatgttttgatccttcagattttcctccatt 45281208  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattt 394  Q
    | |||||||||||   || ||||||||||| |||||||||||||| |||||||||||||||||||||||| | |||| |||||||| |||||||| ||||    
T  45281207 tgccaaataaatcccaacagttaactttaatccaaatgatgtctacggtggaccaaccttaagagtggtctaccataaatcctattaatatttttaattt 45281108  T
Q  395 aaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaacnnnnnnncccatttct 494  Q
    ||||||||||||||||||||||||||||| |  ||||||||||| |||||   |||||||| || |||||||||||||||||||       ||||||||     
T  45281107 aaaccgtttgatcttttttattaaaagatgaacgttagatcatgcatgtctactgtatctt-ccatgagtcaacaacacttaac-tgttttcccatttca 45281010  T
Q  495 tcatcttcactcctctcatctttatcatcttcttcatacaaactcatcaatcttcaaactcaacccaaaaaatccagcaaatcattaaaaa 585  Q
    |||||||||  ||| | | ||| |||||||| ||||||||| ||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  45281009 tcatcttcatccctttaaccttcatcatctttttcatacaacctcatcaatattcacactcaacccagaaaatccagcaaatcattaaaaa 45280919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 195 - 477
Target Start/End: Original strand, 4810467 - 4810744
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||| |||||||||||||||| ||||||||||| ||||||||| || | |||||||||| ||||||||||||| ||| ||||| ||||||     
T  4810467 ggcttatttgatctaatggtccctcaaatactttcaaatttttattttggtcccataattaataaaacgtatgttttggtccttcaaatttttctccgtt 4810566  T
Q  295 taccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
    | |||||||||||  ||||||||||||||| ||||||||||||||||||||||      |||||||||||||| ||||||||||||| |||||||| |||    
T  4810567 tgccaaataaatcccgacggttaactttaaccccaaatgatgtctatggtgga-----attaagagtggtccaccatagatcctattaatatttttaatt 4810661  T
Q  394 taaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaa 477  Q
    ||||| |||||||||||||||||||||||  || ||||||||||  || ||  ||||||||| || ||||||||||||||||||    
T  4810662 taaactgtttgatcttttttattaaaagaggatcgttagatcatacatatctattgtatctt-ccttgagtcaacaacacttaa 4810744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 187 - 411
Target Start/End: Complemental strand, 32798658 - 32798434
Alignment:
Q  187 aattttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatatttt 286  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||  |||| ||||||||  ||||    
T  32798658 aatttttaggcttatttgatgcaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttagtccctcaattttt 32798559  T
Q  287 cctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatt 386  Q
     |||||| |  |||||||||| | |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||  |    
T  32798558 tctccgtttgtcaaataaatcctcacggttaagtttaactcaaatgatgtctatggtggatcaaccttaagagtggtccaccatagatcctattaattat 32798459  T
Q  387 tttgatttaaaccgtttgatctttt 411  Q
    ||| |||||||||||||||||||||    
T  32798458 tttaatttaaaccgtttgatctttt 32798434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 194 - 413
Target Start/End: Complemental strand, 32695394 - 32695174
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||| |||||||||| || ||||  |||| |||  |||||||| ||    
T  32695394 aggcttatttgattcattggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtacgtttaagtccttcacgttttcctctgt 32695295  T
Q  294 ataccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
     | |||||| | || |||| ||||| ||||| |||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||| ||  |||| ||    
T  32695294 ttgccaaattagtcctgaccgttaagtttaaccccaaatgatgtctatggtgaaccaatcttaagattggtccaccatagatcctattaattattttaat 32695195  T
Q  393 ttaaaccgtttgatctttttt 413  Q
    |||||||||||||| ||||||    
T  32695194 ttaaaccgtttgatttttttt 32695174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 193 - 408
Target Start/End: Complemental strand, 44076483 - 44076267
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| ||| ||||||| |||||  ||||||||||    
T  44076483 aaggcttatttgatccaatggtccctcaaataatttcaaatttttattttggtcccacaattaataaaacgtatcttttggtgcctcaatttttcctccg 44076384  T
Q  293 tataccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttga 391  Q
    | | |||||||||||   || ||||| ||||| |||||||||||||||||||||| |||| |||| | || |||| |||| ||| |||| || ||||| |    
T  44076383 tttgccaaataaatccctacagttaagtttaaccccaaatgatgtctatggtggaacaacattaaaaatgatccaccataaatcttattaatttttttaa 44076284  T
Q  392 tttaaaccgtttgatct 408  Q
    |||||||| ||||||||    
T  44076283 tttaaaccatttgatct 44076267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 194 - 380
Target Start/End: Complemental strand, 42872308 - 42872124
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||||  ||||| | | |||||||| || ||||| |||| |||  |||||||||||    
T  42872308 aggcttatttgatccaatggtcccttaaataattttaagttttcattttaatctcataatgaataaaacgtacgttttagtccttcactttttcctccgt 42872209  T
Q  294 ataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
     |  |||||||||| ||||||||||||||||||  ||  ||||||||||| |||||||||||||||||||| | |||||||||||||    
T  42872208 ttgtcaaataaatcctgacggttaactttaacctcaa--atgtctatggtagaccaaccttaagagtggtctaccatagatcctatt 42872124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 195 - 408
Target Start/End: Original strand, 42870811 - 42871025
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||||||||  |  |||||||||||| |||||||||||||| |||| |||||||||| || ||||| |||||| |  ||||| || ||     
T  42870811 ggcttatttgatccaatggtttcctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgttttagtcccttactttttcgtctgtt 42870910  T
Q  295 taccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
    | || ||| |||| |||| ||||| ||||| |||||| ||||||||| ||||||||| ||||||||||||||| | |||| | |||| |  ||| | |||    
T  42870911 tgccgaatgaatcctgactgttaagtttaaccccaaaagatgtctattgtggaccaatcttaagagtggtccaccgtagaccttattaaattttgtaatt 42871010  T
Q  394 taaaccgtttgatct 408  Q
    |||||||||||||||    
T  42871011 taaaccgtttgatct 42871025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 191 - 409
Target Start/End: Original strand, 30786670 - 30786888
Alignment:
Q  191 ttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctc 290  Q
    |||||||||||||||| ||||||||| ||||||||||| || ||||||||||| || || | |||||||||| ||| ||||| |||||||  |||| |||    
T  30786670 ttaaggcttatttgattcaatggtccttcaaataattttaagttttcattttgatcacataattaataaaacgtatattttgatccctcacttttttctc 30786769  T
Q  291 cgtataccaaataaatcatgacggttaac--tttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttt 388  Q
    ||| | ||||||||||   ||| ||||||  |||||| | ||  |||||||||||||| |||| |||| |||||||||||||| | | |||| || || |    
T  30786770 cgtttgccaaataaattccgactgttaactttttaactctaa--atgtctatggtggatcaactttaaaagtggtccatcataaaccttattaattttgt 30786867  T
Q  389 tgatttaaaccgtttgatctt 409  Q
    | |||| ||||||||||||||    
T  30786868 taattttaaccgtttgatctt 30786888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 195 - 408
Target Start/End: Original strand, 32693828 - 32694039
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||| |||||||||   || |||||| || |||||||||||||| |||| ||||||||||||| | |||||||| ||| ||||||||||||     
T  32693828 ggcttatttgattcaatggtcctctaattaattttaagttttcattttggtcccacaattaataaaacatacgctttggtccttcagattttcctccgtt 32693927  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattt 394  Q
    | |||||||||||   || ||||||||||||   ||  |||| |||| |||||||||||||| ||||| | |||||||| | |||| || || || ||||    
T  32693928 tgccaaataaatcccaacagttaactttaactttaa--atgtatatgatggaccaaccttaaaagtggcctatcatagaccttattaattttattaattt 32694025  T
Q  395 aaaccgtttgatct 408  Q
     |||||||||||||    
T  32694026 taaccgtttgatct 32694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 220 - 413
Target Start/End: Original strand, 6397806 - 6397997
Alignment:
Q  220 aaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaac 319  Q
    ||||||||||| ||||||||||||||| |||| |||||||||| ||  |||| ||||||||| |||| |||||| | |||||||||||||||  |||||     
T  6397806 aaataatttcatattttcattttggtcccacaattaataaaacttacattttagtccctcatttttttctccgtttgccaaataaatcatgaatgttaaa 6397905  T
Q  320 tttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||| |||||| |   |||||||  ||||||||| | ||||||||| |||||| | |||| || ||||| ||||||||| |||||||| ||||    
T  6397906 tttaactccaaataa---ctatggtaaaccaacctttacagtggtccaccatagaccttattaatttttttaatttaaaccatttgatctgtttt 6397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 223 - 413
Target Start/End: Original strand, 42877645 - 42877832
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||| ||||||||||||||||| |  |||||||||  ||||||||||||||||  |||  || |||    ||||||||||  |||||||||||||    
T  42877645 taatttcaagttttcattttggtctcataactaataaaactcatgttttggtccctcacgtttgtcttcgtcagtcaaataaatcccgacggttaacttt 42877744  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    ||||| ||  |||| ||||||||||||||||||||| ||||||| ||||||||||||| || | ||| |||| |||| |||||||| ||||    
T  42877745 aaccccaa--atgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaat-tatttaatttcaaccctttgatctatttt 42877832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 192 - 422
Target Start/End: Complemental strand, 13117754 - 13117525
Alignment:
Q  192 taaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctcc 291  Q
    ||||||||||| ||||   |||||||| |  ||||||||  |||||||||||||| || | |||||||||     ||||| |||||||| |||||||||     
T  13117754 taaggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctct 13117655  T
Q  292 gtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttga 391  Q
    || | |||||||||||  |||  | || ||||||||||||||| | ||| |||||||||| |||| ||||||||||||||||||||||| ||  |||| |    
T  13117654 gtttgccaaataaatcccgaccatcaagtttaacccaaatgatctatatagtggaccaactttaaaagtggtccatcatagatcctattaattattttaa 13117555  T
Q  392 tttaaaccgtttgatcttttttattaaaaga 422  Q
    | | ||||||||||| |||||| ||||||||    
T  13117554 tatcaaccgtttgatgtttttt-ttaaaaga 13117525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 309 - 422
Target Start/End: Complemental strand, 24192666 - 24192555
Alignment:
Q  309 tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 408  Q
    |||| |||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||| |    
T  24192666 tgactgttaactttaaccctaa--atgtctatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgattt 24192569  T
Q  409 tttttattaaaaga 422  Q
    ||||| ||||||||    
T  24192568 tttttcttaaaaga 24192555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 193 - 368
Target Start/End: Original strand, 41629704 - 41629877
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||| |||||||||||| | |||||  |||||||||||| |||| |||||||||||||| |||||||||| ||| ||||| |||||||  ||||| ||||    
T  41629704 aaggtttatttgatccattagtcccctaaataatttcaagtttttattttggtctcacaattaataaaacgtatattttgatccctcaagttttcttccg 41629803  T
Q  293 tataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatc 368  Q
    | | |||||||||||  ||| |||||||| ||| | ||  | |||||||||| ||||||||||| |||||| ||||    
T  41629804 tttgccaaataaatcccgaccgttaacttgaactccaa--aagtctatggtgaaccaaccttaaaagtggttcatc 41629877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 195 - 408
Target Start/End: Complemental strand, 8571735 - 8571522
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||| | ||||| |  || |||||||| |||||||||||||||  ||| |||||||||| || |||||||||| |||| |||| ||||||     
T  8571735 ggcttatttgatctattggtctcctaactaatttcacattttcattttggtcatacaattaataaaacgtacgttttggtccttcatttttttctccgtt 8571636  T
Q  295 taccaaataaat--catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
    ||||||||||||  |  | | ||||| |||||||| ||  ||||||||||||||||||| |||| | ||||||| |||| | | |||| |  ||||| ||    
T  8571635 taccaaataaatccctagtctgttaagtttaaccccaa--atgtctatggtggaccaactttaaaaatggtccaccatataccttattaaactttttaat 8571538  T
Q  393 ttaaaccgtttgatct 408  Q
    |||||| |||||||||    
T  8571537 ttaaactgtttgatct 8571522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 212 - 423
Target Start/End: Original strand, 22551022 - 22551231
Alignment:
Q  212 ggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcat-g 310  Q
    |||||||||||||||||||| |||| ||||||||| |||| |||||||||| ||| |||||||||||||  |||| |||| | | ||||||||||| | |    
T  22551022 ggtccctcaaataatttcaagtttttattttggtcccacaattaataaaacgtatcttttggtccctca-ctttttctccatttgccaaataaatcctgg 22551120  T
Q  311 acggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttt 410  Q
    |  ||||| |||||||| ||  || |||||||||||| |||||||| |||| |||| |||| | | |||| |  ||| | |||||||||||||||||| |    
T  22551121 attgttaagtttaaccccaa--atctctatggtggacaaaccttaaaagtgatccaccataaaccttattaaattttgtaatttaaaccgtttgatctgt 22551218  T
Q  411 tttattaaaagat 423  Q
    ||| | |||||||    
T  22551219 tttttaaaaagat 22551231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 26696529 - 26696642
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||| ||||||||||  || ||||||||| |||||||||||||| |||| |||||||||||||  |||||||||||||  ||||||||| |    
T  26696529 aggcttatttgattcaatggtcccctaattaatttcaagttttcattttggtcccacaattaataaaacatacattttggtccctcactttttcctccat 26696628  T
Q  294 ataccaaataaatc 307  Q
     | |||||||||||    
T  26696629 ttgccaaataaatc 26696642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 32797136 - 32797245
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||| | |||||||| |||||||||||| |||||||||||||| |||| |||||||||| || ||||  ||||||||  |||||||||||     
T  32797136 ggcttatttgatctattggtcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtt 32797235  T
Q  295 taccaaataa 304  Q
    ||||||||||    
T  32797236 taccaaataa 32797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 195 - 373
Target Start/End: Complemental strand, 30787718 - 30787542
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||| |||| || |||||||||||| || |||||||||||||| || | ||||||||| |||| |||||||||||||  ||||| |||||     
T  30787718 ggcttatttgatctaatgttctctcaaataattttaagttttcattttggtcccataattaataaaatatatattttggtccctcactttttcttccgtt 30787619  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    | ||||||||||| ||   |||||||||||| | ||  |||| ||| |||||||||| |||| | |||| |||| ||||    
T  30787618 tgccaaataaatcctgtatgttaactttaactctaa--atgtttatagtggaccaactttaaaaatggttcatcgtaga 30787542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 223 - 373
Target Start/End: Complemental strand, 42100196 - 42100048
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  ||||||||||||||||||| |||||||||     |||||| |||||||||||||||||||| | |||||||| ||  ||| |||||||||    
T  42100196 taatttcatgttttcattttggtctcacaattaataaaaatggcgttttgatccctcatattttcctccgtttgccaaataattcccgactgttaacttt 42100097  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    |||   ||  |||||| ||||||||||||||||| ||||||||||| ||||    
T  42100096 aacttcaa--atgtctttggtggaccaaccttaaaagtggtccatcgtaga 42100048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 28420294 - 28420180
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||||||| | |||||| |||||||| |||||||||||| |||||||||||||| || | ||||||||||| | ||||| ||||||||| ||||||||||    
T  28420294 aaggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccg 28420195  T
Q  293 tataccaaataaatc 307  Q
    | |  ||||||||||    
T  28420194 tttgtcaaataaatc 28420180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 194 - 411
Target Start/End: Original strand, 42098560 - 42098777
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||| ||||   |||||||| |  ||||||||  |||||||||||||| |||| |||||||||     |||||| |||| ||  |||  ||||||    
T  42098560 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttgatcccccacgtttgtctccgt 42098659  T
Q  294 ataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
     | |||||||||||  ||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| ||   ||| ||    
T  42098660 ttgccaaataaatcc-gactgttaattttaaccccaaatgatgtctttggtggaccaaccttaaaagtggtccaccatagatcctattaattactttaat 42098758  T
Q  393 ttaaaccgtttgatctttt 411  Q
    || ||||||||||| ||||    
T  42098759 ttcaaccgtttgatttttt 42098777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 28418803 - 28418916
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||| | |||||| |||||||| |||||||||||| |||||||||||||| || | ||||||||||| | ||||| ||||||||  |||||||||||    
T  28418803 aggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgt 28418902  T
Q  294 ataccaaataaatc 307  Q
     | |||||||||||    
T  28418903 ttgccaaataaatc 28418916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 315 - 422
Target Start/End: Complemental strand, 20180671 - 20180566
Alignment:
Q  315 ttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 414  Q
    ||||||||||||| ||  |||||||| |||||| ||| |||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||||||||||     
T  20180671 ttaactttaaccctaa--atgtctatagtggactaacattaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgatcttttttc 20180574  T
Q  415 ttaaaaga 422  Q
    ||||||||    
T  20180573 ttaaaaga 20180566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 12850513 - 12850465
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttg 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12850513 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttg 12850465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 41630243 - 41630175
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaac 262  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| ||||||||||    
T  41630243 aggcttatttgatccaatggttccttaaataattttaaattttcattttagtctcacaattaataaaac 41630175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 327
Target Start/End: Complemental strand, 6398577 - 6398483
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc 327  Q
    ||||||||||||||||| | |||||||||||   ||||| ||||||||| ||||||||||| |  ||||||||||||||| ||||| ||||||||    
T  6398577 ttttcattttggtctcataattaataaaacaagcgttttagtccctcattttttcctccgtttgtcaaataaatcatgactgttaagtttaaccc 6398483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 220 - 373
Target Start/End: Original strand, 45279703 - 45279854
Alignment:
Q  220 aaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaac 319  Q
    ||||||||||||||||||||||| |||  ||| |||||||||| || ||||||||||||||  ||||  | ||| |  ||||||||||  ||||||||||    
T  45279703 aaataatttcaaattttcattttagtcatacaattaataaaacgtacgttttggtccctcaagttttttttcgtttggcaaataaatcccgacggttaac 45279802  T
Q  320 tttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    |||||| | ||  |||| ||||||||||||  ||||| ||||||| ||| ||||    
T  45279803 tttaactctaa--atgtatatggtggaccagtcttaaaagtggtctatcgtaga 45279854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 327
Target Start/End: Complemental strand, 212830 - 212697
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||| | ||||| |||||||||||| ||||||||||| ||| |||| |||| ||||||  |||||| ||||||||  ||||||| |||     
T  212830 ggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtt 212731  T
Q  295 taccaaataaatc-atgacggttaactttaaccc 327  Q
    |  |||||||||| |||   ||||||||||||||    
T  212730 tgtcaaataaatctatgggtgttaactttaaccc 212697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 327
Target Start/End: Original strand, 239424 - 239557
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||| | ||||| |||||||||||| ||||||||||| ||| |||| |||| ||||||  |||||| ||||||||  ||||||| |||     
T  239424 ggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtt 239523  T
Q  295 taccaaataaatc-atgacggttaactttaaccc 327  Q
    |  |||||||||| |||   ||||||||||||||    
T  239524 tgtcaaataaatctatgggtgttaactttaaccc 239557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 327
Target Start/End: Complemental strand, 726453 - 726320
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||| | ||||| |||||||||||| ||||||||||| ||| |||| |||| ||||||  |||||| ||||||||  ||||||| |||     
T  726453 ggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtt 726354  T
Q  295 taccaaataaatc-atgacggttaactttaaccc 327  Q
    |  |||||||||| |||   ||||||||||||||    
T  726353 tgtcaaataaatctatgggtgttaactttaaccc 726320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 327
Target Start/End: Original strand, 792779 - 792912
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||| | ||||| |||||||||||| ||||||||||| ||| |||| |||| ||||||  |||||| ||||||||  ||||||| |||     
T  792779 ggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtt 792878  T
Q  295 taccaaataaatc-atgacggttaactttaaccc 327  Q
    |  |||||||||| |||   ||||||||||||||    
T  792879 tgtcaaataaatctatgggtgttaactttaaccc 792912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 327
Target Start/End: Complemental strand, 798954 - 798821
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||| | ||||| |||||||||||| ||||||||||| ||| |||| |||| ||||||  |||||| ||||||||  ||||||| |||     
T  798954 ggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtt 798855  T
Q  295 taccaaataaatc-atgacggttaactttaaccc 327  Q
    |  |||||||||| |||   ||||||||||||||    
T  798854 tgtcaaataaatctatgggtgttaactttaaccc 798821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 8570116 - 8570201
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctca 280  Q
    |||||||||||||||||||||||  || ||||||||  ||||||||||||||  ||| |||||||||| || ||||||||||||||    
T  8570116 ggcttatttgatccaatggtcccctaattaatttcacgttttcattttggtcctacaattaataaaacgtacgttttggtccctca 8570201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 333 - 422
Target Start/End: Complemental strand, 9854860 - 9854772
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 422  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||| ||  || | ||||||||| |||||| |||||| ||||||||    
T  9854860 atgtctatggtggaccaactttaagagtggtccaccatagatcctattaattcttctaatttaaaccatttgat-tttttttttaaaaga 9854772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 472
Target Start/End: Complemental strand, 416525 - 416413
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  ||||||||||||  ||||||| || ||||||||||||||||||||| ||||  || |||||||||||||| ||||||  |||||||| | |    
T  416525 tggtccactatagatcctattattatttttaatataaaccgtttgatcttttttaataaagaatgattgttagatcatgcatgtccactgtatcttactg 416426  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  416425 tgaaccaacaaca 416413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 223 - 423
Target Start/End: Complemental strand, 14840989 - 14840790
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacg--gttaact 320  Q
    |||||||||||||||||||||||  || |  ||||||||   |||||||||||||||||||||  |||||| || |||||||||| |  ||   |||| |    
T  14840989 taatttcaaattttcattttggtaccataactaataaaattcatgttttggtccctcatatttgtctccgtctatcaaataaatc-tctcgttcttaagt 14840891  T
Q  321 ttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaa 420  Q
    ||||||  ||  ||||||||||||||||||| |||| |||| |||| ||||| || |||| |  ||||| |||||||||||||||| | |||| | ||||    
T  14840890 ttaaccacaa--atgtctatggtggaccaacattaaaagtgatccaccatagttcttattaaattttttaatttaaaccgtttgatatgttttctaaaaa 14840793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 385 - 477
Target Start/End: Original strand, 26696689 - 26696780
Alignment:
Q  385 tttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaa 477  Q
    ||||| ||||||||||||||||||||||||||||||||  || ||||||| ||| |||||   |||||||| ||||||||||||||| |||||    
T  26696689 tttttaatttaaaccgtttgatcttttttattaaaagaggatcgttagattatgcatgtctactgtatctt-ccgtgagtcaacaacgcttaa 26696780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 194 - 380
Target Start/End: Original strand, 13116327 - 13116511
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||| ||||   |||||||| |  ||||||||  |||||||||||||| |||| |||||||||     ||||| |||| ||| ||||||||||||    
T  13116327 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccttcacattttcctccgt 13116426  T
Q  294 ataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
     | |||||||||||  ||| |||||||||||| | ||  ||||||||  | |||||| ||| ||||||||||||| |||| ||||||    
T  13116427 ttgccaaataaatcccgactgttaactttaactccaa--atgtctataatagaccaatcttcagagtggtccatcgtagaccctatt 13116511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 311 - 413
Target Start/End: Complemental strand, 31845795 - 31845696
Alignment:
Q  311 acggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttt 410  Q
    ||||||||||||||||| ||  |||||||||||| |||||| |||||||||||||| ||||| ||||||| ||  |||| || ||||| |||||||||||    
T  31845795 acggttaactttaaccccaa--atgtctatggtgaaccaac-ttaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgatcttt 31845699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 211612 - 211705
Alignment:
Q  214 tccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatc 307  Q
    ||||| |||||||||||  |||||||||||||| |||| ||||||||||| | ||||| |||||| |  |||| |||||| |||||||||||||    
T  211612 tcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatc 211705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 307
Target Start/End: Complemental strand, 240644 - 240551
Alignment:
Q  214 tccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatc 307  Q
    ||||| |||||||||||  |||||||||||||| |||| ||||||||||| | ||||| |||||| |  |||| |||||| |||||||||||||    
T  240644 tcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatc 240551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 725235 - 725328
Alignment:
Q  214 tccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatc 307  Q
    ||||| |||||||||||  |||||||||||||| |||| ||||||||||| | ||||| |||||| |  |||| |||||| |||||||||||||    
T  725235 tcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatc 725328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 307
Target Start/End: Complemental strand, 793999 - 793906
Alignment:
Q  214 tccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatc 307  Q
    ||||| |||||||||||  |||||||||||||| |||| ||||||||||| | ||||| |||||| |  |||| |||||| |||||||||||||    
T  793999 tcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatc 793906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 406
Target Start/End: Complemental strand, 10669426 - 10669353
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| |   |||| |||||||||| |||||    
T  10669426 atgtctatggtgaaccaaccttaagagtggtccaccatagatcctattaaatattttaatttaaaccgattgat 10669353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 472
Target Start/End: Original strand, 37400942 - 37401054
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    ||||||| ||||||||||||| || ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| |||| |  |||||||| | |    
T  37400942 tggtccaccatagatcctattaatttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgttcactgtatcttactg 37401041  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  37401042 tgaaccaacaaca 37401054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 332 - 380
Target Start/End: Complemental strand, 42362732 - 42362684
Alignment:
Q  332 gatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  42362732 gatgtctatggtggaccaacattaagagtggttcatcatagatcctatt 42362684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 412
Target Start/End: Original strand, 38696334 - 38696522
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatca-tgacggttaactt 321  Q
    |||||| || ||||||||||||||||| |  |||||||||  ||||||||||||||||  ||| |||||||    ||||||||||  |  |  |||| ||    
T  38696334 taattttaagttttcattttggtctcataactaataaaactcatgttttggtccctcaagtttgcctccgtcggtcaaataaatcccttgctattaagtt 38696433  T
Q  322 taacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttt 412  Q
    |||||| ||  ||||||||||| |||||||||||| ||||||||| ||||||||  ||| || ||| | |||| |||| |||||| |||||    
T  38696434 taaccctaa--atgtctatggtagaccaaccttaaaagtggtccaccatagatctaattaatttttataattttaaccctttgattttttt 38696522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 195 - 293
Target Start/End: Complemental strand, 13198059 - 13197961
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||| ||||||||||| | |||||||||| | ||||| |||||||| |||| |||||||||  || ||||  ||||||||  |||||||||||    
T  13198059 ggcttatttgctccaatggtccattaaataatttcgagttttcgttttggtcccacaattaataaaaggtacgtttaagtccctcactttttcctccgt 13197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 358 - 472
Target Start/End: Original strand, 14030478 - 14030592
Alignment:
Q  358 agtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcc 457  Q
    |||||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| |    
T  14030478 agtggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttac 14030577  T
Q  458 cgtgagtcaacaaca 472  Q
     ||||  ||||||||    
T  14030578 tgtgaaccaacaaca 14030592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 17702377 - 17702308
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctca 280  Q
    |||||||| || ||||||| |||||||||||||||| || |  ||||||||| |||||||||||||||||    
T  17702377 tggtcccttaattaatttccaattttcattttggtcccataactaataaaacctatgttttggtccctca 17702308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 422
Target Start/End: Original strand, 24305160 - 24305266
Alignment:
Q  314 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||| ||  ||||||||||||||||||| ||||||||| || ||| ||||||||||| || ||||  | || |||  ||||||||||| |    
T  24305160 gttaactttaaccctaa--atgtctatggtggaccaacattaagagtgatctatcttagatcctattaattttttaaacttcaactatttgatcttttgt 24305257  T
Q  414 attaaaaga 422  Q
     ||||||||    
T  24305258 tttaaaaga 24305266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 363 - 472
Target Start/End: Complemental strand, 36803226 - 36803117
Alignment:
Q  363 tccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtga 462  Q
    ||||| ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | ||||    
T  36803226 tccattatagatcctatttttttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactgtga 36803127  T
Q  463 gtcaacaaca 472  Q
      ||||||||    
T  36803126 accaacaaca 36803117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 472
Target Start/End: Complemental strand, 1659258 - 1659147
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  |||||||||||| || ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  1659258 tggtccactatagatcctatt-atttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 1659160  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  1659159 tgaaccaacaaca 1659147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 472
Target Start/End: Complemental strand, 6337206 - 6337094
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  6337206 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaagattgttagatcatgcatgtccactgtatcttactg 6337107  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  6337106 tgaaccaacaaca 6337094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 34504616 - 34504544
Alignment:
Q  372 gatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtc 444  Q
    ||||||||| || ||||| ||||||||  ||||||||||||||||||||||  || ||||||||||| |||||    
T  34504616 gatcctattaatttttttaatttaaactctttgatcttttttattaaaagaggatcgttagatcatgcatgtc 34504544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 380
Target Start/End: Complemental strand, 42878846 - 42878764
Alignment:
Q  298 caaataaatcatgacggttaactttaaccc---aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
    |||||||||| |||| ||||||||||||||   |||  |||| |||||||||||||||||||| |||||||| |||||||||||||    
T  42878846 caaataaatcctgacagttaactttaaccccccaaa--atgt-tatggtggaccaaccttaagtgtggtccaccatagatcctatt 42878764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 44933874 - 44933829
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  44933874 ttcggcagttaactgccgagg-ggcatttgagtaatttactcgtgtg 44933829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 413
Target Start/End: Original strand, 43202234 - 43202311
Alignment:
Q  336 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||||  |  |||  |||||||| ||||||| ||||||    
T  43202234 tctatagtggatcaaccttaagagtggtccaccatagatcctattagttatttaaatttaaactgtttgatttttttt 43202311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 7121841 - 7121888
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  7121841 aatttcgacagttaactgccgag-aggcatttgagtaatttacttgtgt 7121888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 38331023 - 38331066
Alignment:
Q  44 agtgccgatggattaaattgaatttcggcagttaactgccgagg 87  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||    
T  38331023 agtgccgatgggtgaaactgaatttcggcagttaactgccgagg 38331066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 2335206 - 2335251
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  2335206 ttcggtagttaactgccgagg-ggcatttgagtaatttactcgtgtg 2335251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 27502623 - 27502668
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||    
T  27502623 ttcgacagttaactgccgagg-ggcatttgagtaatttactcgtgtg 27502668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 293
Target Start/End: Complemental strand, 38697108 - 38697026
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||| ||||||| | |||||||||||||| || |  |||||||||  |||||||| ||| ||| |||| |||||||    
T  38697108 tggtccctcaattaatttccagttttcattttggtcccataactaataaaactcatgttttgatccttcacatttgcctccgt 38697026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 43362334 - 43362293
Alignment:
Q  71 gcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  43362334 gcagttaactgccgag-aggcatttgagtaatttactcgtgtg 43362293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 17701050 - 17701116
Alignment:
Q  307 catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatc 375  Q
    ||||||||||||||||||| | ||  || |||||| |||| |||||||| |||||||||| ||||||||    
T  17701050 catgacggttaactttaactctaa--atttctatgatggatcaaccttacgagtggtccaccatagatc 17701116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 28694093 - 28694049
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||    
T  28694093 ttcggcagttaactgccgagg-gacatttgagtaatttactcgtgt 28694049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 31184607 - 31184563
Alignment:
Q  68 tcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    |||||||||||||| |||| |||||||||||||||||||| |||||    
T  31184607 tcggcagttaactgacgag-aggcatttgagtaatttactcgtgtg 31184563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 39277519 - 39277563
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  39277519 ttcggcagttaactgccgagg-ggcatttgaataatttactcgtgt 39277563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 40437565 - 40437504
Alignment:
Q  345 gaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    |||||||||||| ||||||||| | ||||||||||| ||  |||| |||||||| |||||||    
T  40437565 gaccaaccttaaaagtggtccaccgtagatcctattaattattttaatttaaactgtttgat 40437504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 45437572 - 45437503
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    ||||||||| ||||||||||| || || | ||||||||||  ||||||||||||||| | ||| ||||||    
T  45437572 taatttcaagttttcattttgatcccataattaataaaactcatgttttggtccctcgtgtttgcctccg 45437503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 17338067 - 17338151
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatc 307  Q
    ||||||||  |||||||||||||| |||| |||||||||     ||||| |||||||| ||||| |||||| | |||||||||||    
T  17338067 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacatttttctccgtttgccaaataaatc 17338151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 413
Target Start/End: Original strand, 22620019 - 22620099
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    ||||||| |||| || ||| |||||||  |||||| ||||||| |||| ||  |||| |||||||||||||||| ||||||    
T  22620019 atgtctaaggtgaactaactttaagagctgtccattatagatcatattaatcatttttatttaaaccgtttgatttttttt 22620099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 23708869 - 23708801
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaa 261  Q
    |||||||||| |||||| |||||||  || ||||||   ||||||||||||||| || |||||||||||    
T  23708869 aaggcttattagatccattggtcccctaactaatttgttattttcattttggtcccatatttaataaaa 23708801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 39513242 - 39513289
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||  ||||||||||||||| ||||||||||||||||||| ||||    
T  39513242 aatttcgatagttaactgccgagg-ggcatttgagtaatttactcgtgt 39513289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 180; Significance: 6e-97; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 194 - 585
Target Start/End: Complemental strand, 6030589 - 6030198
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||||| |||||||||||||||| || ||||||||||| || |||| ||||| |||  || |||||| ||| |||||||||||||  |    
T  6030589 aggcttatttgatccaatagtccctcaaataatttgaagttttcattttgatcccacaattaattaaaagtacgttttgatccttcatattttcctctat 6030490  T
Q  294 ataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
     | |||||||||||   || |||||||||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||| |||||||| |||    
T  6030489 ttgccaaataaatctcaacagttaactttaacccaaatgatgtctacggtggaccaaccttaagagtgatctaccatagatcctattaatatttttaatt 6030390  T
Q  394 taaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaac-nnnnnnncccattt 492  Q
    |||||||||||||||||||||||||||||| |  |||| |||||| |||||   |||||||| || |||||||||||||||||||        |||||||    
T  6030389 taaaccgtttgatcttttttattaaaagatgaacgttatatcatgcatgtctactgtatctt-ccatgagtcaacaacacttaacttttttttcccattt 6030291  T
Q  493 cttcatcttcactcctctcatctttatcatcttcttcatacaaactcatcaatcttcaaactcaacccaaaaaatccagcaaatcattaaaaa 585  Q
    | |||||||||| ||||| | ||| ||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  6030290 catcatcttcacccctctaaccttcatcgtcttcttcatacaacctcatcaatattcaaactcaacccagaaaatccagcaaatcattaaaaa 6030198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 195 - 413
Target Start/End: Complemental strand, 11317486 - 11317268
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||  |||||||||||     
T  11317486 ggcttatttgattcaatggtccctcaaataatttcaaattttcattttggtcccacaattaataaaacatatattttggtccctcaatttttcctccgtt 11317387  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattt 394  Q
    |  |||||||||| | || ||||| |||||| ||||||||||||||||| |||||||||||||||||||| | ||||||||||||| ||  |||| ||||    
T  11317386 tggcaaataaatcctcacagttaagtttaactcaaatgatgtctatggtagaccaaccttaagagtggtctaccatagatcctattaattattttaattt 11317287  T
Q  395 aaaccgtttgatctttttt 413  Q
    ||| |||||| || |||||    
T  11317286 aaatcgtttggtcattttt 11317268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 193 - 436
Target Start/End: Complemental strand, 42641980 - 42641738
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| ||||||||| || | ||||||||||  |  |||||||||| ||  ||||  ||||    
T  42641980 aaggtttatttgattcaatggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgcaccttttggtcccccactttttt-tccg 42641882  T
Q  293 tataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
    | | ||||||||||| | ||  |||| || ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||| ||  |||| ||    
T  42641881 tttgccaaataaatcctcacaattaagttcaacccaaatgatgtctatggtgggccaaccttaagagtggtctaccatagatcctattaattattttaat 42641782  T
Q  393 ttaaaccgtttgatcttttttattaaaagataattgttagatca 436  Q
    |||||| |||||||||||||| |||||||| ||| ||| |||||    
T  42641781 ttaaactgtttgatctttttttttaaaagagaatcgttggatca 42641738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 195 - 413
Target Start/End: Original strand, 11547657 - 11547875
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||  | |||||| | |||||||||||| ||||||||||||||||| | ||||||||||| |||||||   ||||||| ||||||| |||     
T  11547657 ggcttatttgatttattggtcctttaaataatttcaagttttcattttggtctcataattaataaaacacatgttttaacccctcattttttccttcgtt 11547756  T
Q  295 taccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
    |  |||||||||| |||| ||||| ||||| ||||||||||||||||  ||||||||||||| |||||||||| |||||||| |||| | |||| | |||    
T  11547757 tgtcaaataaatcctgactgttaagtttaaccccaaatgatgtctatcatggaccaaccttaggagtggtccaccatagatcgtatt-aaatttataatt 11547855  T
Q  394 taaaccgtttgatctttttt 413  Q
    ||||||||||||||| ||||    
T  11547856 taaaccgtttgatctgtttt 11547875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 195 - 411
Target Start/End: Original strand, 17459251 - 17459468
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||| | |||||| |||||||||||| |||||||||||||| |||| |||||||||| || ||||  ||||||||  |||||||||||     
T  17459251 ggcttatttgatccattagtcccttaaataatttcaagttttcattttggtcacacaattaataaaacgtacgtttaagtccctcactttttcctccgtt 17459350  T
Q  295 taccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
    | ||||||||||  ||||  |||| ||||| ||||||||||||||||||||||| || ||||| |||| || | ||||||||||||| ||  || | |||    
T  17459351 tgccaaataaattctgacttttaagtttaaccccaaatgatgtctatggtggacgaatcttaaaagtgatctaacatagatcctattaattattataatt 17459450  T
Q  394 taaaccgtttgatctttt 411  Q
    ||||||||||||| ||||    
T  17459451 taaaccgtttgatttttt 17459468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 193 - 411
Target Start/End: Original strand, 32469144 - 32469363
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatg--ttttggtccctcatattttcctc 290  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| || |||| |||||||||| | |   ||||||||| |||  ||||||||    
T  32469144 aaggcttatttgattcaatggtccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtgtaccttttggtccttcactttttcctc 32469243  T
Q  291 cgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttg 390  Q
    ||| | ||||||||||| | |  ||||| |||||| ||||| |||| |||||||||||||| ||||||||||||||  |||||||||||| ||  ||||     
T  32469244 cgt-tgccaaataaatccttatagttaagtttaactcaaattatgtatatggtggaccaactttaagagtggtccactatagatcctattaattatttta 32469342  T
Q  391 atttaaaccgtttgatctttt 411  Q
    ||||||||| |||||| ||||    
T  32469343 atttaaaccctttgatatttt 32469363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 187 - 399
Target Start/End: Original strand, 43033072 - 43033282
Alignment:
Q  187 aattttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatatttt 286  Q
    ||||| |||||||||||||||||||| ||||| |||||||||||| |||||||||||||| |||| |||||||||| ||  |||||||||||||  ||||    
T  43033072 aatttaaaggcttatttgatccaatgatcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcacttttt 43033171  T
Q  287 cctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatt 386  Q
    ||||||| | ||||||||||| |    ||||| |||||||  ||  ||||||||||| |||||||||||||||||||||| |||| | |||||| ||  |    
T  43033172 cctccgtttgccaaataaatcctcgatgttaagtttaacctcaa--atgtctatggtagaccaaccttaagagtggtccaccataaaccctattaattat 43033269  T
Q  387 tttgatttaaacc 399  Q
    ||| |||||||||    
T  43033270 tttaatttaaacc 43033282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 193 - 347
Target Start/End: Complemental strand, 7437881 - 7437727
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||||||||| |||| |||||||||| ||| |||||||||||||  ||||||||||    
T  7437881 aaggcttatttgatccaatggttgctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccg 7437782  T
Q  293 tataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggac 347  Q
    | ||| ||||||||| | ||  |||| |||||||||||| || |||||| |||||    
T  7437781 tttacaaaataaatcctaacaattaagtttaacccaaataatatctatgatggac 7437727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 195 - 373
Target Start/End: Complemental strand, 17460802 - 17460626
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||||||||||   || ||||||||| ||||||||||| || |||| |||||||||| || |||||||||||||| ||||||||||||     
T  17460802 ggcttatttgatccaatggtcctctaattaatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtt 17460703  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    | |||||||||||  ||| ||||||||||||   ||  |||||||||||||||||| ||||| ||||||| ||| ||||    
T  17460702 tcccaaataaatcccgaccgttaactttaactttaa--atgtctatggtggaccaatcttaaaagtggtctatcgtaga 17460626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 198 - 380
Target Start/End: Complemental strand, 43034586 - 43034404
Alignment:
Q  198 ttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtatac 297  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||  ||||||| |||||||||| ||  |||||||||||||  ||||||||||| |      
T  43034586 ttatttgattcaatggtccctcaaataatttcaagttttcattttaatctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgt 43034487  T
Q  298 caaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
    |||||||||| |  | ||||| |||||||      |||||||||||||| |||| |||||||||||||| |||||||||||||    
T  43034486 caaataaatcttcgctgttaagtttaacctctcaaatgtctatggtggatcaactttaagagtggtccaccatagatcctatt 43034404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 189 - 324
Target Start/End: Complemental strand, 28562933 - 28562798
Alignment:
Q  189 ttttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcc 288  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| || | |||||||||||||  |||||||||||||  ||||||    
T  28562933 tttttaggcttatttgattcaatggtccctcaaataatttcaaattttcattttggtcccataattaataaaacataccttttggtccctcactttttcc 28562834  T
Q  289 tccgtataccaaataaatcatgacggttaactttaa 324  Q
    ||||| |  ||||||||||  ||| ||||| |||||    
T  28562833 tccgtttgtcaaataaatccagactgttaagtttaa 28562798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 223 - 406
Target Start/End: Original strand, 29219411 - 29219595
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||||||||||||| |||| |||||||||     ||||| ||||||||  ||||||||||| | |||||||||||   || ||||| |||    
T  29219411 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccaactgttaagttt 29219510  T
Q  323 aaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||  |||| |||| |||||||||||    
T  29219511 aaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 29219595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 223 - 406
Target Start/End: Original strand, 29332710 - 29332894
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||||||||||||| |||| |||||||||     ||||| ||||||||  ||||||||||| | |||||||||||   || ||||| |||    
T  29332710 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccaactgttaagttt 29332809  T
Q  323 aaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||  |||| |||| |||||||||||    
T  29332810 aaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 29332894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 223 - 414
Target Start/End: Complemental strand, 18617096 - 18616904
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||||||||||||| |||| |||||||||     ||||| ||||||||  ||||||||||| | |||||||||||   ||  |||| |||    
T  18617096 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccaactattaagttt 18616997  T
Q  323 aaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 414  Q
    ||||| ||||||||||||||||||||||  ||||| ||||||||| ||||||||||||| ||  |||| |||| ||||||||||| |||||||    
T  18616996 aaccccaaatgatgtctatggtggaccagtcttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatttttttta 18616904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 197 - 306
Target Start/End: Original strand, 28561368 - 28561477
Alignment:
Q  197 cttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtata 296  Q
    |||||||||| ||||||||||| ||||||||| || ||||||||||||||||||| |||||||||| ||| |||||||||||||  ||||||| ||| |     
T  28561368 cttatttgattcaatggtcccttaaataattttaagttttcattttggtctcacaattaataaaacgtatcttttggtccctcaccttttcctacgtttg 28561467  T
Q  297 ccaaataaat 306  Q
     |||||||||    
T  28561468 tcaaataaat 28561477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 191 - 366
Target Start/End: Original strand, 11315927 - 11316100
Alignment:
Q  191 ttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctc 290  Q
    ||||||||||||| || || |||||||  |||||||||||| |||||||||||||| |||| |||||||||| || ||||  ||||||||  ||||||||    
T  11315927 ttaaggcttatttaattcattggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctc 11316026  T
Q  291 cgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtcca 366  Q
    ||| | |||||||||||  | | ||||| |||||  | ||  |||||||||||||| ||||||||| | |||||||    
T  11316027 cgtttgccaaataaatcccggctgttaagtttaattccaa--atgtctatggtggatcaaccttaaaaatggtcca 11316100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 223 - 411
Target Start/End: Complemental strand, 1085476 - 1085290
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||||||||||||  ||||||||||||||     |||||||||||||||  |||||||||| | ||||||||||||  || ||||| |||    
T  1085476 taatttcatgttttcattttggtaccacatttaataaaattggcgttttggtccctcat--tttcctccgtttgccaaataaatcacaaccgttaagttt 1085379  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttt 411  Q
    ||   ||||||||| ||||||||| || | ||||||||||| || ||||||||||||| ||  |||| ||||  |||||||||| ||||    
T  1085378 aataaaaatgatgtttatggtggatcatctttaagagtggtacaccatagatcctattaattattttaatttcgaccgtttgatttttt 1085290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 195 - 373
Target Start/End: Complemental strand, 32470693 - 32470517
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||| | |||||  |||||||||||| |||| ||||||||| |||| |||||||||| || ||||  || |||||| |||||||||||     
T  32470693 ggcttatttgatccattagtcccctaaataatttcaagtttttattttggtcccacaattaataaaacgtacgtttaagttcctcatgttttcctccgtt 32470594  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    |  ||||||||||  | | ||||| |||||| | ||  ||||||||||||||  |||||||| | ||||||||| ||||    
T  32470593 tgtcaaataaatcccggctgttaagtttaactccaa--atgtctatggtggataaaccttaaaaatggtccatcgtaga 32470517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 41566107 - 41566184
Alignment:
Q  9 gaagaatatgaaggtataatttcctcgacacttaaagtgccgatggattaaattgaatttcggcagttaactgccgagg 87  Q
    |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||| ||||||||    
T  41566107 gaagaaaatgaagttataatttcctcgacacttaa-gtgccgatggattaaattggacttcgacagttaattgccgagg 41566184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 199 - 276
Target Start/End: Original strand, 7436469 - 7436546
Alignment:
Q  199 tatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtcc 276  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||  ||| ||||||||| |||  |||||||||    
T  7436469 tatttgatccaatggtccctcaaataatttcaagtttttattttggtcctacaattaataaaatataccttttggtcc 7436546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 233 - 408
Target Start/End: Original strand, 34464004 - 34464178
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatca-tgacggttaactttaacccaaat 331  Q
    ||||||||||||| | | | ||||||||||| || ||||||||| |||  ||| |||||||  | ||||||||||  |||| ||||| |||||||| ||     
T  34464004 ttttcattttggtttgataattaataaaacaaatcttttggtccatcaggtttgcctccgttaatcaaataaatctctgactgttaagtttaaccccaa- 34464102  T
Q  332 gatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 408  Q
     |||||||| || |||||||||||||||||||||| |||||| | ||||    ||||| |||||||| |||||||||    
T  34464103 -atgtctatcgttgaccaaccttaagagtggtccaccatagaccttattagattttttaatttaaactgtttgatct 34464178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 233 - 420
Target Start/End: Original strand, 34512850 - 34513034
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatg 332  Q
    |||||||||||||| || | ||||||||||  |||||||| ||||||| |||| |||||||    ||||||||||||||| ||||| |||||||    |     
T  34512850 ttttcattttggtcccataattaataaaactcatgttttgatccctcaaatttgcctccgttagtcaaataaatcatgactgttaagtttaacc---tta 34512946  T
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaa 420  Q
    |||| ||||||||| ||||| ||||||||||||| |||| | | |||| |  ||||| ||||||||  |||||| | |||| ||||||    
T  34512947 atgtatatggtggatcaaccataagagtggtccaccatataccttattaaattttttaatttaaactatttgatttgtttttttaaaa 34513034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 41565451 - 41565372
Alignment:
Q  7 tcgaagaatatgaaggtataatttcctcgacacttaaagtgccgatggattaaattgaatttcggcagttaactgccgagg 87  Q
    |||||||| |||||| ||| ||||||||| ||||||| ||| ||||||||||||||| | |||||||||||||||||||||    
T  41565451 tcgaagaaaatgaagttatgatttcctcggcacttaa-gtgtcgatggattaaattggacttcggcagttaactgccgagg 41565372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 223 - 364
Target Start/End: Original strand, 1083014 - 1083153
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    |||||||| ||||||||||||||| ||||||||||||||    ||||||||||| |||| |||| |||||| | |||| ||||||   |  |||||||||    
T  1083014 taatttcatattttcattttggtcccacatttaataaaaatggtgttttggtccgtcatctttttctccgtttgccaattaaatcccaagtgttaacttt 1083113  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtc 364  Q
    ||| | ||  || ||||||||||| ||||||||| |||||||    
T  1083114 aactctaa--atatctatggtggatcaaccttaaaagtggtc 1083153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 211 - 351
Target Start/End: Complemental strand, 2277571 - 2277432
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaat-cat 309  Q
    ||||||||||||||||||| | |||||||||||||| || |  ||||||||| |||||||||||||||||  ||  |||| ||    ||||||||| |||    
T  2277571 tggtccctcaaataatttccagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagttcacctcagtcggtcaaataaatccat 2277472  T
Q  310 gacggttaactttaacccaaatgatgtctatggtggaccaac 351  Q
    |   |||||||||||||| ||  |||||||||||||||||||    
T  2277471 gggagttaactttaaccccaa--atgtctatggtggaccaac 2277432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 333 - 423
Target Start/End: Complemental strand, 34513534 - 34513444
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagat 423  Q
    |||| |||||| ||||||||||||||||| |||| |||||| | |||| || ||||| |||||||||||||||||| |||| | |||||||    
T  34513534 atgtatatggttgaccaaccttaagagtgatccaccatagaccttattaatttttttaatttaaaccgtttgatctgttttttaaaaagat 34513444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 289
Target Start/End: Original strand, 36010578 - 36010669
Alignment:
Q  198 ttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcct 289  Q
    |||||||||||| | |||||| |||||||||||  ||||||||||||||| ||  |||||||||| ||| |||| ||||||||  |||||||    
T  36010578 ttatttgatccattagtcccttaaataatttcatgttttcattttggtcttacgattaataaaacgtatattttagtccctcactttttcct 36010669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 336 - 422
Target Start/End: Original strand, 8320895 - 8320981
Alignment:
Q  336 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 422  Q
    |||||||||||||| ||||||||| |||||| |||||||  |||| ||  |||| ||||||||||||||||  ||||| ||||||||    
T  8320895 tctatggtggaccatccttaagagcggtccaccatagattatattaattattttaatttaaaccgtttgattgttttttttaaaaga 8320981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 6028741 - 6028794
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtc 246  Q
    ||||||||||||||||| ||||| |  |||||||||||||||||||||||||||    
T  6028741 aaggcttatttgatccattggtctcctaaataatttcaaattttcattttggtc 6028794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 472
Target Start/End: Original strand, 40323095 - 40323207
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||| | |||||||| | |    
T  40323095 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtcggctgtatcttactg 40323194  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  40323195 tgaaccaacaaca 40323207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 29074061 - 29074106
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  29074061 ttcggcagttaactgccgagg-ggcatttgagtaatttactcgtgtg 29074106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 422
Target Start/End: Original strand, 30748621 - 30748703
Alignment:
Q  340 tggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 422  Q
    ||||| || ||||||||||||||  || |||||||| |||| ||  |||| |||||||  |||||||||||||||||||||||    
T  30748621 tggtgaacaaaccttaagagtggcacaccatagatcatattaattattttaatttaaattgtttgatcttttttattaaaaga 30748703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 351
Target Start/End: Original strand, 34147150 - 34147289
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaat-cat 309  Q
    ||||||||||||||||||  | |||||||||||||| || |  |||||||||  ||||||||||||||||  ||  ||||||     ||||||||| |||    
T  34147150 tggtccctcaaataattttcagttttcattttggtcccataagtaataaaactcatgttttggtccctcaagttcacctccgccagtcaaataaatccat 34147249  T
Q  310 gacggttaactttaacccaaatgatgtctatggtggaccaac 351  Q
    |   |||||||||||||| ||  |||||||||||||||||||    
T  34147250 gggtgttaactttaaccccaa--atgtctatggtggaccaac 34147289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 414
Target Start/End: Complemental strand, 4921039 - 4920958
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 414  Q
    ||||||||||| ||||||| |||| | ||||||| |||| |||||||| ||  || | |||||||||||||||| |||||||    
T  4921039 atgtctatggtagaccaactttaaaaatggtccaccataaatcctattaattattctaatttaaaccgtttgatttttttta 4920958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 29947782 - 29947738
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  29947782 ttcggcagttaactgccgagg-ggcatttgagtaatttactcgtgt 29947738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 472
Target Start/End: Complemental strand, 2384442 - 2384330
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  ||||||||||||  | ||||| || ||||| ||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  2384442 tggtccactatagatcctattattttttttaatataaactgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 2384343  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  2384342 tgaaccaacaaca 2384330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 380
Target Start/End: Complemental strand, 16295191 - 16295151
Alignment:
Q  340 tggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  16295191 tggtggaccaaccttaacagtggtccaccatagatcctatt 16295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 413
Target Start/End: Complemental strand, 28611233 - 28611154
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||||| || |||| | |||||||  |||||||||||| || | ||| |||||||||||||||| ||||||    
T  28611233 atgtctatggtggaccgactttaaaaatggtccactatagatcctattaat-tatttaatttaaaccgtttgatttttttt 28611154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 33222634 - 33222587
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||| |||||||||||||||| |||||||||||||||||| ||||    
T  33222634 aatttcggtagttaactgccgagga-gcatttgagtaatttactcgtgt 33222587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 413
Target Start/End: Original strand, 34467641 - 34467721
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    ||||||||| ||||| |||||||||||||||||| |||| | | |||| |  ||||| |||||||| ||||||| ||||||    
T  34467641 atgtctatgatggacaaaccttaagagtggtccaccataaaccttattaagttttttaatttaaactgtttgatatttttt 34467721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 472
Target Start/End: Complemental strand, 36215124 - 36215013
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  |||||||||||| || ||||| || ||||||||||||||||||||| |||   |  |||||||||||||| ||||||  |||||||| | |    
T  36215124 tggtccactatagatcctatt-atttttttaatataaaccgtttgatcttttttaataatgaaggattgttagatcatgcatgtccactgtatcttactg 36215026  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  36215025 tgaaccaacaaca 36215013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 411
Target Start/End: Original strand, 35903665 - 35903720
Alignment:
Q  356 agagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttt 411  Q
    ||||||||||| ||||||||||||| |   |||| |||||||||||||||||||||    
T  35903665 agagtggtccaccatagatcctattaaatattttaatttaaaccgtttgatctttt 35903720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 278
Target Start/End: Original strand, 37956963 - 37957030
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccct 278  Q
    |||||||| || |||||||||||||||||||||||| || |  ||||||||   ||||||||||||||    
T  37956963 tggtcccttaattaatttcaaattttcattttggtcccataagtaataaaattcatgttttggtccct 37957030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 3086051 - 3086006
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||    
T  3086051 ttcggcagttaactgccgagga-acatttgagtaatttactcgtgtg 3086006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 10424854 - 10424809
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    |||||||||||||||| |||| ||||||||||||||||||| |||||    
T  10424854 ttcggcagttaactgctgagg-ggcatttgagtaatttactcgtgtg 10424809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 18615542 - 18615580
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaa 261  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  18615542 taatttcatattttcattttggtctcacaattaataaaa 18615580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 30803076 - 30803121
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||    
T  30803076 ttcggcagttaactgccgagg-gacatttgagtaatttactcgtgtg 30803121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 36510914 - 36510959
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||    
T  36510914 ttcggcagttaactgccgagg-ggtatttgagtaatttactcgtgtg 36510959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 37322166 - 37322205
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaattta 105  Q
    |||||||||||||||||||||||  |||||||||||||||||    
T  37322166 aatttcggcagttaactgccgag--ggcatttgagtaattta 37322205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 39951212 - 39951253
Alignment:
Q  71 gcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||| ||||||||||||||||| |||||    
T  39951212 gcagttaactgccgaggag-catttgagtaatttactcgtgtg 39951253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 4286691 - 4286720
Alignment:
Q  58 aaattgaatttcggcagttaactgccgagg 87  Q
    ||||||||||||||||||||||||||||||    
T  4286691 aaattgaatttcggcagttaactgccgagg 4286720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 23233800 - 23233763
Alignment:
Q  209 aatggtccctcaaataatttcaaattttcattttggtc 246  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  23233800 aatggtccctcaactaattacaaattttcattttggtc 23233763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 2271792 - 2271839
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||| ||||||| || |||||||||||||||| ||||    
T  2271792 aatttcggcagttaacggccgagg-ggtatttgagtaatttactcgtgt 2271839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 4286192 - 4286148
Alignment:
Q  43 aagtgccgatggattaaattgaatttcggcagttaactgccgagg 87  Q
    |||||||||||| | ||| |||||||||||||||||||| |||||    
T  4286192 aagtgccgatgggtgaaactgaatttcggcagttaactgtcgagg 4286148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 14002537 - 14002490
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||| ||||||||||||||||| | ||||||||||||||||| ||||    
T  14002537 aatttcagcagttaactgccgagg-gacatttgagtaatttactcgtgt 14002490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 444
Target Start/End: Complemental strand, 30749305 - 30749194
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt-attaaaagataattgtta 431  Q
    |||||||||||  |||||||||||||||||| ||  | ||  |||||| ||  |||| ||||||||||| ||||||||||| |||||||||  |  ||||    
T  30749305 atgtctatggta-accaaccttaagagtggttcactacagggcctattaattattttaatttaaaccgtatgatcttttttgattaaaagaggaccgtta 30749207  T
Q  432 gatcatgaatgtc 444  Q
    ||||||| |||||    
T  30749206 gatcatgcatgtc 30749194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 34468984 - 34469068
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatc 307  Q
    ||||||||  |||||||||||||| |||| |||||||||   | ||||| |||||||| |||||| || || | |||||||||||    
T  34468984 taatttcatgttttcattttggtcgcacaattaataaaaatgacgttttagtccctcacattttcttctgtttgccaaataaatc 34469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 40156417 - 40156370
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||| ||||||| ||||| ||||||||||||||||||| ||||    
T  40156417 aatttcggcaattaactgtcgagg-ggcatttgagtaatttactcgtgt 40156370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 40221121 - 40221149
Alignment:
Q  59 aattgaatttcggcagttaactgccgagg 87  Q
    |||||||||||||||||||||||||||||    
T  40221121 aattgaatttcggcagttaactgccgagg 40221149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 41560054 - 41560010
Alignment:
Q  69 cggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    |||||||||||||||||| ||| ||||| |||| |||||||||||    
T  41560054 cggcagttaactgccgagaaggtatttgcgtaaattactggtgtg 41560010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 5e-79; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 191 - 586
Target Start/End: Complemental strand, 27705438 - 27705057
Alignment:
Q  191 ttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctc 290  Q
    ||||| |||||||||| ||||||| |||||||||||||||| ||||||||||||||  ||| |||||||||| || |||||||||||||| |||||||||    
T  27705438 ttaagacttatttgattcaatggttcctcaaataatttcaagttttcattttggtcatacaattaataaaacgtacgttttggtccctcagattttcctc 27705339  T
Q  291 cgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttg 390  Q
    | | | ||||||||||   ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||     
T  27705338 cttttgccaaataaatacagacagttaactttaatccaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaatattttta 27705239  T
Q  391 atttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaac---nnnnnnncc 487  Q
    |||||||||||||||| |||||||||||||||| || |||||||| || |||||   |  ||||||| ||||||||||||||| ||||          ||    
T  27705238 atttaaaccgtttgatattttttattaaaagatgatcgttagatc-tgcatgtctactacatcttccagtgagtcaacaacac-taacttttttttttcc 27705141  T
Q  488 catttcttcatcttcactcctctcatctttatcatcttcttcatacaaactcatcaatcttcaaactcaacccaaaaaatccagcaaatcattaaaaac 586  Q
    |||||||| |||||||               ||||||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  27705140 catttctttatcttca---------------tcatcttcttcgtacaacctcataaatcttcaaactcaacccagaaaatccagcaaatcattaaaaac 27705057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 193 - 413
Target Start/End: Original strand, 22047728 - 22047949
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||||||||||||||||||||||||| || ||||||||| |||||||||||||| |||| |||||||||| || ||||||||||||||| ||||||||||    
T  22047728 aaggcttatttgatccaatggtcccttaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcattttttcctccg 22047827  T
Q  293 tataccaaataaatcatgacggttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttga 391  Q
    | | ||||||||||| || | ||||| |||||| | ||||||||||||||||||| ||||||||||||||||||| |||| |||||||  ||  |||| |    
T  22047828 tttgccaaataaatcctggctgttaagtttaactctaaatgatgtctatggtggatcaaccttaagagtggtccaccataaatcctatgaattattttaa 22047927  T
Q  392 tttaaaccgtttgatctttttt 413  Q
    ||||||||||||||| ||||||    
T  22047928 tttaaaccgtttgatttttttt 22047949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 197 - 413
Target Start/End: Original strand, 39603853 - 39604070
Alignment:
Q  197 cttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtata 296  Q
    ||||||||||||| || |||||||||||||||||| ||||||||||| || |||| |||||||||| || |||||||||||||| |||||||||||| |     
T  39603853 cttatttgatccattgatccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttg 39603952  T
Q  297 ccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattta 395  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||| |||||||||||| |||| |||| ||||||||||||| ||  |||| |||||    
T  39603953 ccaaataaatcatgactgttaagtttaaccccaaatgatgtctatggtagaccaaccttaaaagtgatccaccatagatcctattaattattttaattta 39604052  T
Q  396 aaccgtttgatctttttt 413  Q
    ||| ||||||| ||||||    
T  39604053 aactgtttgatttttttt 39604070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 193 - 406
Target Start/End: Complemental strand, 30859292 - 30859078
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||||||||||||| || | ||||||||||||||||||| |||||||||||||| |||| |||||||||| || ||||  |||||||| ||||||||| |    
T  30859292 aaggcttatttgattcattagtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcacattttcctctg 30859193  T
Q  293 tataccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttga 391  Q
    | | |||||||| || |||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||  |||| |    
T  30859192 tttgccaaataagtcttgaccgttaagtttaaccccaaatgatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaattattttaa 30859093  T
Q  392 tttaaaccgtttgat 406  Q
    |||||||||||||||    
T  30859092 tttaaaccgtttgat 30859078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 193 - 413
Target Start/End: Complemental strand, 325305 - 325087
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||  |||||||||||||  ||||||||||    
T  325305 aaggcttatttgatctaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaagttttcctccg 325206  T
Q  293 tataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
    | | |||||||||||  ||| |||||||||||| | ||  |||||||||||||||||||||||| ||||||||||| |||| | |||| || || || ||    
T  325205 tttgccaaataaatcccgactgttaactttaactctaa--atgtctatggtggaccaaccttaatagtggtccatcgtagaccttattaattttgttaat 325108  T
Q  393 ttaaaccgtttgatctttttt 413  Q
    || ||||||||||||||||||    
T  325107 tttaaccgtttgatctttttt 325087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 194 - 405
Target Start/End: Original strand, 30910738 - 30910950
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||| ||||   |||||||| |  ||||||||  |||||||||||||| |||| |||||||||     ||||| |||||||| ||||||||| ||    
T  30910738 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctctgt 30910837  T
Q  294 ataccaaataaatcatgacggttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
     |||||||||||||  ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||  |||| ||    
T  30910838 ttaccaaataaatctcgactgttaactttaacaccaaatgatgtctttggtggaccaaccttaagagtggtccaccatagatcctattaattattttaat 30910937  T
Q  393 ttaaaccgtttga 405  Q
    || ||||||||||    
T  30910938 ttcaaccgtttga 30910950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 39605584 - 39605461
Alignment:
Q  198 ttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtatac 297  Q
    ||||||||| |||||||||   || ||||||||| |||||||||||||| |||| ||||||||||||| |||||||||||||| |||||||||||| | |    
T  39605584 ttatttgattcaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacatacgttttggtccctcagattttcctccgtttgc 39605485  T
Q  298 caaataaatcatgacggttaactt 321  Q
    |||||||||| |||||||||||||    
T  39605484 caaataaatcctgacggttaactt 39605461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 211 - 413
Target Start/End: Original strand, 8521269 - 8521468
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatg 310  Q
    |||||||| || ||||||||| |||||||||||||| || |  |||||||||  ||||||||||||||||  |||  ||||||    ||||||||||  |    
T  8521269 tggtcccttaattaatttcaagttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatcccg 8521368  T
Q  311 acggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttt 410  Q
    ||||||||||||||||| ||  |||| ||||||||||||||||||||| ||||||| ||||||||||||| || | ||| |||| |||| |||||||| |    
T  8521369 acggttaactttaaccccaa--atgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaat-tatttaatttcaaccctttgatctat 8521465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 211 - 413
Target Start/End: Complemental strand, 1010466 - 1010267
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatg 310  Q
    |||||||| || ||||||||| |||| ||||||||| || |  |||||||||  ||||||||||||||||  |||  ||||||    ||||||||||  |    
T  1010466 tggtcccttaattaatttcaagtttttattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatcccg 1010367  T
Q  311 acggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttt 410  Q
    ||||||||||||||||| ||  |||| ||||||||||||||||||||||||||||  ||||||||||||| || | ||| |||| |||| |||||||| |    
T  1010366 acggttaactttaaccccaa--atgtgtatggtggaccaaccttaagagtggtccgccatagatcctattaat-tatttaatttcaaccctttgatctat 1010270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 195 - 369
Target Start/End: Original strand, 30857798 - 30857970
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||| |||||||||   || |||||| || |||||||||||||| |||| |||||||||| ||||||||||||| ||| |||||||||| |     
T  30857798 ggcttatttgattcaatggtcctctaattaattttaagttttcattttggtcccacaattaataaaacgtatgttttggtccttcagattttcctccttt 30857897  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatca 369  Q
    |  |||||||||| | || ||||||||||||   ||  ||||||||| |||||||||||||| ||||||| ||||    
T  30857898 tgtcaaataaatcttaacagttaactttaactttaa--atgtctatgatggaccaaccttaaaagtggtctatca 30857970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 194 - 423
Target Start/End: Complemental strand, 22308918 - 22308690
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||| ||||   |||||||  |||||||||||  |||||||||||||| || | |||||||||||   ||||| |||||||| ||||| ||||||    
T  22308918 aggcttattagatcgtttggtcccctaaataatttcatgttttcattttggtcccataattaataaaacaggcgttttagtccctcacattttgctccgt 22308819  T
Q  294 ataccaaataaat-catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
     | |||||||||| ||||   ||||| |||||||| ||  |||||||||||||||| ||||||||||||||||| ||||||   |||| |  ||||| ||    
T  22308818 ttgccaaataaatccatggttgttaagtttaaccccaa--atgtctatggtggacctaccttaagagtggtccaccatagacattattaaattttttaat 22308721  T
Q  393 ttaaaccgtttgatcttttttattaaaagat 423  Q
     |||||| |||||||| |||| | |||||||    
T  22308720 gtaaaccatttgatctgttttttaaaaagat 22308690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 309 - 413
Target Start/End: Original strand, 1102731 - 1102833
Alignment:
Q  309 tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 408  Q
    |||| |||||||||||||| ||  ||||||||||| |||||||||||||||||||||| |||||||| |||| ||  |||| ||||||||||||||||||    
T  1102731 tgactgttaactttaaccccaa--atgtctatggtagaccaaccttaagagtggtccaccatagatcttattaattattttaatttaaaccgtttgatct 1102828  T
Q  409 ttttt 413  Q
    |||||    
T  1102829 ttttt 1102833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 197 - 380
Target Start/End: Original strand, 15548240 - 15548421
Alignment:
Q  197 cttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtata 296  Q
    ||||||||||||| |||||||  |||||||||||||||||  ||||  || || | |||||||||   |   ||| ||||||||| ||||||||||| |     
T  15548240 cttatttgatccattggtcccctaaataatttcaaatttt--tttttatcccataattaataaaattcactatttagtccctcat-ttttcctccgtttg 15548336  T
Q  297 ccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
    ||||||||||| || | ||||| |||||||| ||||||||||| ||||||||||||||||||| || |||| |||| ||||||||    
T  15548337 ccaaataaatcctgcctgttaagtttaaccctaaatgatgtctctggtggaccaaccttaagaatgatccaccataaatcctatt 15548421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 337 - 413
Target Start/End: Original strand, 11262532 - 11262608
Alignment:
Q  337 ctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||  || | ||||||||| |||||||||||||    
T  11262532 ctatggtggaccaaccttaagagtggtccaccatagatcctattaattattataatttaaaccatttgatctttttt 11262608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 194 - 373
Target Start/End: Complemental strand, 33174079 - 33173901
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||| ||||   |||||||| |  ||||||||  ||||||||||| || ||||||||||||||     ||||| ||||||||  |||||||| ||    
T  33174079 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctctgt 33173980  T
Q  294 ataccaaataaatcat-gacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
     | ||||||||||| | | | ||||| |||||||| ||  |||||||||||||||||||||||||||||||| | ||||||    
T  33173979 ttgccaaataaatccttggctgttaagtttaaccccaa--atgtctatggtggaccaaccttaagagtggtctaccataga 33173901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 22049254 - 22049142
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||| ||| | |||||  |||||||||||| |||||||||||||| || | |||||||||| || ||||||||||||||  |||||||| ||     
T  22049254 ggcttatttgaaccattagtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctgtt 22049155  T
Q  295 taccaaataaatc 307  Q
    |  ||||||||||    
T  22049154 tggcaaataaatc 22049142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 41798064 - 41798004
Alignment:
Q  196 gcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaa 256  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||||||||| |||| ||||    
T  41798064 gcttatttgatccattggtccctcaaataatttcaagtttttattttggtcccacaattaa 41798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 372
Target Start/End: Complemental strand, 8523836 - 8523687
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||| |||||||||||||| || |  |||||||||  |||||||| ||| |||| |||  ||||||    |||||||||| |||| |||||||||    
T  8523836 taatttcaagttttcattttggtcccataactaataaaactcatgttttgatccttcatgtttgtctccgtcagtcaaataaatcctgacagttaacttt 8523737  T
Q  323 aa---cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatag 372  Q
    ||   ||||||  |||| ||||||||||||||||| ||||||||||| |||||    
T  8523736 aaccccccaaa--atgt-tatggtggaccaaccttcagagtggtccaccatag 8523687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 373
Target Start/End: Complemental strand, 30912252 - 30912104
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||||||||||||| |||| |||||||||     ||||| ||||||||  |||| |||||| | |||||||||||   |  |||||||||    
T  30912252 taatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccctcacctttttctccgtttgccaaataaatcccaagtgttaacttt 30912153  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    ||| | ||  || ||||||||||||||||||||| |||||| |||||||||    
T  30912152 aactccaa--atatctatggtggaccaaccttaaaagtggtacatcataga 30912104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 338 - 380
Target Start/End: Original strand, 1009325 - 1009367
Alignment:
Q  338 tatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  1009325 tatggtggaccaaccttaagagtggtccaccatagatcctatt 1009367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 211 - 351
Target Start/End: Original strand, 32757839 - 32757978
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaat-cat 309  Q
    ||||||||||||||||||| | |||||||||||||| || |  |||||||||  ||||||||||||||||  ||  ||||||     ||||||||| |||    
T  32757839 tggtccctcaaataatttccagttttcattttggtcccataaataataaaactcatgttttggtccctcaagttcacctccgccggtcaaataaatccat 32757938  T
Q  310 gacggttaactttaacccaaatgatgtctatggtggaccaac 351  Q
    |   |||||||||||||| ||  |||||||||||||||||||    
T  32757939 gggtgttaactttaaccccaa--atgtctatggtggaccaac 32757978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 472
Target Start/End: Original strand, 27262581 - 27262692
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||| ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  27262581 tggtccattatagatcctattttt-tttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 27262679  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  27262680 tgaaccaacaaca 27262692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 472
Target Start/End: Original strand, 31171014 - 31171126
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  31171014 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 31171113  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  31171114 tgaaccaacaaca 31171126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 455
Target Start/End: Original strand, 28393375 - 28393470
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatctt 455  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  ||||||||    
T  28393375 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatctt 28393470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 4906868 - 4906909
Alignment:
Q  46 tgccgatggattaaattgaatttcggcagttaactgccgagg 87  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  4906868 tgccgatggatttaattgaatttcagcagttaactgccgagg 4906909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 373
Target Start/End: Original strand, 324174 - 324214
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  324174 atgtctatggtggaccaactttaatagtggtccatcataga 324214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 30192510 - 30192463
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  30192510 aatttcggcagttaactgccgaag-ggcatttgagtaatttactcgtgt 30192463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 204520 - 204477
Alignment:
Q  69 cggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||    
T  204520 cggcagttaactgccgaaggggcatttgagtaaattactggtgt 204477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 5791 - 5746
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  5791 ttcggcagttaactgccgagg-ggcgtttgagtaatttactcgtgtg 5746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 3891498 - 3891453
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||    
T  3891498 ttcggcagttaactgccgagg-ggtatttgagtaatttactcgtgtg 3891453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 3892495 - 3892540
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||    
T  3892495 ttcggcagttaactgccgagg-gacatttgagtaatttactcgtgtg 3892540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 17047048 - 17047010
Alignment:
Q  43 aagtgccgatggattaaattgaatttcggcagttaactg 81  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  17047048 aagtgtcgatggattaaattggatttcggcagttaactg 17047010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 30711218 - 30711263
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    |||||||||||||||||||||| ||||||| |||||||||| |||||    
T  30711218 ttcggcagttaactgccgagga-gcatttgcgtaatttacttgtgtg 30711263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 8539574 - 8539618
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||    
T  8539574 ttcggcagttaactgccgagg-ggtatttgagtaatttacttgtgt 8539618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 11262256 - 11262325
Alignment:
Q  197 cttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatat 266  Q
    ||||||| ||||| |||| ||  ||||||||| || |||||||||| ||| |||| ||||||||||||||    
T  11262256 cttattttatccattggttccctaaataattttaagttttcattttagtcccacaattaataaaacatat 11262325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 11348533 - 11348577
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||    
T  11348533 ttcggcagttaactgccgagga-acatttgagtaatttactcgtgt 11348577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 422
Target Start/End: Complemental strand, 13520760 - 13520691
Alignment:
Q  353 ttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 422  Q
    ||||||||||| || ||||||||||||| ||   |||||||||||| ||| ||| |||||||| ||||||    
T  13520760 ttaagagtggttcaccatagatcctattaattaatttgatttaaactgttggattttttttataaaaaga 13520691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 412
Target Start/End: Complemental strand, 20539301 - 20539248
Alignment:
Q  359 gtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttt 412  Q
    |||||| |||||||| | |||| || ||||| ||||||||||||||||||||||    
T  20539301 gtggtctatcatagaccttattaatttttttaatttaaaccgtttgatcttttt 20539248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 26047839 - 26047896
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctca 280  Q
    |||||||||||||| |||||||||||| |  |||||||||  ||||||| ||||||||    
T  26047839 taatttcaaatttttattttggtctcataactaataaaactcatgttttagtccctca 26047896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Original strand, 223410 - 223446
Alignment:
Q  385 tttttgatttaaaccgtttgatcttttttattaaaag 421  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  223410 tttttaatttaaaccgtttgatcttttttatttaaag 223446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 324080 - 324116
Alignment:
Q  210 atggtccctcaaataatttcaaattttcattttggtc 246  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  324080 atggtcactcaaataatttcaatttttcattttggtc 324116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 19228705 - 19228753
Alignment:
Q  68 tcggcagttaactgccgaggaggcatttgagtaatttactggtgtgtct 116  Q
    |||||||||||||||||||| |||||||  ||| |||||| ||||||||    
T  19228705 tcggcagttaactgccgagggggcatttacgtattttacttgtgtgtct 19228753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 34894146 - 34894198
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtc 246  Q
    ||||||||| |||||| |||||||| || ||||||| | ||||||||||||||    
T  34894146 aggcttattagatccattggtcccttaattaatttccatttttcattttggtc 34894198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 35672063 - 35672102
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttact 107  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  35672063 ttcggcagttaactgccgagg-gacatttgagtaatttact 35672102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 41622191 - 41622144
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||||||| | | ||||||||||||||||| ||||    
T  41622191 aatttcggcagttaactgccgatg-gacatttgagtaatttactcgtgt 41622144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 5e-79; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 195 - 528
Target Start/End: Original strand, 52239875 - 52240209
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||| || |||| |||||||||| || |||||||| | |||  |||| ||||||     
T  52239875 ggcttatttgatctaatggtccctcaaataatttcaaatttttattttgatcccacaattaataaaacgtacgttttggttcttcaggtttttctccgtt 52239974  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattt 394  Q
    | ||||||||||    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  52239975 tgccaaataaattccaagggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaattt 52240074  T
Q  395 aaaccgtttga-tcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaacnnnnnnncccatttc 493  Q
    ||||||||||| | |||||||||||||||||   |||| |||||| |||||    ||||||||| ||||| |||||| |||||||       ||||||||    
T  52240075 aaaccgtttgatttttttttattaaaagatagccgttatatcatgcatgtctaccgtatcttccagtgagccaacaatacttaactttttttcccatttc 52240174  T
Q  494 ttcatcttcactcctctcatctttatcatcttctt 528  Q
     |||||||||  ||||||||||| |||||||||||    
T  52240175 atcatcttcatccctctcatcttcatcatcttctt 52240209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 193 - 478
Target Start/End: Complemental strand, 15450195 - 15449910
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||||||||||||| || |||||||| |||||||||||  |||||||| || || |  | |||||||||| || ||||  ||| || |  ||||||||||    
T  15450195 aaggcttatttgattcattggtcccttaaataatttcaggttttcattatgatcccttagttaataaaacgtacgtttaagtcgcttaccttttcctccg 15450096  T
Q  293 tataccaaataaatcatgacggttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttga 391  Q
    | | ||||||||||| | |||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  15450095 tttgccaaataaatctt-acggttaagtttaactccaaatgttgtctatcgtggaccaaccttaagagtggtccaccatagatcctattaatatttttaa 15449997  T
Q  392 tttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacacttaac 478  Q
    ||||||| ||||| |||||||||||||||||| || ||||||||||| |||||   |||||||||| ||||||||||| ||||||||    
T  15449996 tttaaactgtttgctcttttttattaaaagatgatcgttagatcatgcatgtctagtgtatcttccggtgagtcaacatcacttaac 15449910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 192 - 414
Target Start/End: Complemental strand, 2312603 - 2312380
Alignment:
Q  192 taaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctcc 291  Q
    |||||||||||||||||| |||||||| | |||||||||| ||| |||||| ||| |||| |||||||||| || ||||  ||||||||  |||||||||    
T  2312603 taaggcttatttgatccattggtcccttagataatttcaagtttccattttagtcccacaattaataaaacgtacgtttaagtccctcactttttcctcc 2312504  T
Q  292 gtataccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttg 390  Q
    || | |||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| ||  ||||     
T  2312503 gtttgccaaataaatcatgaccgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattatttta 2312404  T
Q  391 atttaaaccgtttgatctttttta 414  Q
    |||||||| ||||||| |||||||    
T  2312403 atttaaactgtttgatttttttta 2312380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 195 - 407
Target Start/End: Original strand, 1794409 - 1794622
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||  ||||| |||||||  |||||||| ||     
T  1794409 ggcttatttgattcaatggtccctcaaataatttcaagttttcattttgatctcacaattaataaaatataccttttgatccctcactttttcctctgtt 1794508  T
Q  295 taccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
    |  |||||||||| | |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| |||||| | |||| |  ||||| |||    
T  1794509 tgtcaaataaatcctaacggttaagtttaatcccaaatgatgtatatggtggaccaaccttaagagtggtccaccatagaccttattaaattttttaatt 1794608  T
Q  394 taaaccgtttgatc 407  Q
    ||||||||||||||    
T  1794609 taaaccgtttgatc 1794622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 198 - 419
Target Start/End: Complemental strand, 27851047 - 27850831
Alignment:
Q  198 ttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtatac 297  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||| |||||||||||||  |||||||||||        
T  27851047 ttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgt---- 27850952  T
Q  298 caaataaatcatgacggttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaa 396  Q
       |||||||   || ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||  |||| ||||||    
T  27850951 ---ataaatcccaacagttaagtttaacctcaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattattttaatttaa 27850855  T
Q  397 accgtttga-tcttttttattaaa 419  Q
    ||||||||| |||||||| |||||    
T  27850854 accgtttgattctttttttttaaa 27850831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 194 - 399
Target Start/End: Original strand, 11968508 - 11968713
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||||  ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||| ||||| ||||||    
T  11968508 aggcttatttgatcttatggttcctcaaataatttcaagttttcattttggtctcacaattaataaaacatactttttggtccctcagattttgctccgt 11968607  T
Q  294 ataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
     |   ||||||||   | | || ||||||||| || || ||||||||| |||||||||||||||||||||||||||||||||||||| ||  |||| |||    
T  11968608 ttgtaaaataaattccggctgtcaactttaactcagattatgtctatgatggaccaaccttaagagtggtccatcatagatcctattaattattttaatt 11968707  T
Q  394 taaacc 399  Q
    ||||||    
T  11968708 taaacc 11968713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 194 - 413
Target Start/End: Original strand, 6348152 - 6348369
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||  ||||||| |||||  |||||||| ||    
T  6348152 aggcttatttgatcaaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggttcctcactttttcctctgt 6348251  T
Q  294 ataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
     |  |||||||||  ||| |||||| |||||||  ||  |||||||||||||||||||||||||||||||||| | |||| | |||| |||||| | |||    
T  6348252 ttgtcaaataaattctgatggttaagtttaacctcaa--atgtctatggtggaccaaccttaagagtggtccaccgtagaccttattaatatttctaatt 6348349  T
Q  394 taaaccgtttgatctttttt 413  Q
    | |||| |||||||||||||    
T  6348350 ttaaccctttgatctttttt 6348369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 199 - 413
Target Start/End: Complemental strand, 6349667 - 6349449
Alignment:
Q  199 tatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtatacc 298  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| |||| |||||||||| ||  |||||||||||||  ||||| ||||| ||||    
T  6349667 tatttgattcaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaccttttcttccgtttacc 6349568  T
Q  299 aaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatat---ttttgattt 394  Q
    ||||| |||  ||  ||||| ||||| |||||||||||| ||||||||| ||||||||||||||||||| |||||| | |||  ||||   |||| ||||    
T  6349567 aaatagatcccgaacgttaagtttaaccccaaatgatgtatatggtggatcaaccttaagagtggtccaccatagaccatatatatatatattttaattt 6349468  T
Q  395 aaaccgtttgatctttttt 413  Q
    |||| ||||||||||||||    
T  6349467 aaactgtttgatctttttt 6349449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 223 - 411
Target Start/End: Original strand, 7707614 - 7707803
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||||||||||||| |||| |||||||||   | ||||| |||| ||| ||||||||| || | ||||||||||| ||||||||| ||||    
T  7707614 taatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccatcacattttcctctgtttgccaaataaatcctgacggttagcttt 7707713  T
Q  323 aac-ccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttt 411  Q
    ||| ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||| ||  |||| |||| ||||||||||| ||||    
T  7707714 aacaccaaatgatgtctttggtagaccaaccttaagagtggtccaccatagatcctattaattattttaatttcaaccgtttgatttttt 7707803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 194 - 414
Target Start/End: Original strand, 1587179 - 1587398
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||| |||||||||| ||  |||||||||||||  |||||||||||    
T  1587179 aggcttatttgatccaacggtccctcaaataattttaaattttcattttagtctcacaattaataaaacgtaccttttggtccctcactttttcctccgt 1587278  T
Q  294 ataccaaataaatcatgacggttaacttt-aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
     | |||||||||||  || |||||||||| ||| | ||  |||||||| || ||||||| |||| |||| |||||| || | | |||| || || || ||    
T  1587279 ttgccaaataaatcccgatggttaacttttaactctaa--atgtctatagtagaccaactttaaaagtgttccatcgtataccttattaattttgttaat 1587376  T
Q  393 ttaaaccgtttgatctttttta 414  Q
     | |||||||||||||||||||    
T  1587377 cttaaccgtttgatctttttta 1587398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 195 - 373
Target Start/End: Complemental strand, 393756 - 393579
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||  ||| |||||||||||||  |||| ||||||     
T  393756 ggcttatttgatccaacggtccctcaaataatttcaaattttcattttggtcccacaattaataaaaagtatcttttggtccctcacttttttctccgtt 393657  T
Q  295 taccaaataaat-catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    | |||||||||| |  ||| |||||||||||  | ||  |||| ||| ||||||||||||||| ||||||||||| ||||    
T  393656 tgccaaataaatcccggactgttaactttaattctaa--atgtttatagtggaccaaccttaaaagtggtccatcgtaga 393579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 198 - 373
Target Start/End: Original strand, 52963570 - 52963743
Alignment:
Q  198 ttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtatac 297  Q
    |||||||||| | ||||||   |||||||||||| ||||||||||||||||||| |||||||| | |||||||||||||||||  |||| |||||| |      
T  52963570 ttatttgatcaattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtatgttttggtccctcaagtttttctccgtttgt 52963669  T
Q  298 caaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    ||||||||||  ||| |||||||||||| | ||  ||||||||||||||||| |||||| ||||||||||||||||    
T  52963670 caaataaatctcgactgttaactttaactccaa--atgtctatggtggaccagccttaaaagtggtccatcataga 52963743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 197 - 402
Target Start/End: Complemental strand, 42810319 - 42810115
Alignment:
Q  197 cttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtata 296  Q
    ||||||||||||||| |||||| |||||||||||| |||||||||||||| |||| |||||||||| ||  |||  |||||||| |||||||||||| |     
T  42810319 cttatttgatccaatagtcccttaaataatttcaacttttcattttggtcccacaattaataaaacgtacttttaagtccctcacattttcctccgtttg 42810220  T
Q  297 ccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaa 396  Q
    ||||||||||| |    ||||| ||||||||  | ||||||||||||| ||||| ||||||||| ||||| |||||| | |||| |  ||||| ||||||    
T  42810219 ccaaataaatccttggtgttaagtttaaccccca-gatgtctatggtgaaccaatcttaagagtagtccaccatagaccttattaaattttttaatttaa 42810121  T
Q  397 accgtt 402  Q
    ||||||    
T  42810120 accgtt 42810115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 194 - 306
Target Start/End: Original strand, 24426336 - 24426448
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||  |||||||||||||  |||||||||||    
T  24426336 aggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccctcactttttcctccgt 24426435  T
Q  294 ataccaaataaat 306  Q
     | ||||| ||||    
T  24426436 ttgccaaaaaaat 24426448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 194 - 356
Target Start/End: Complemental strand, 1588208 - 1588045
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||||   |||||||||||||||||| || |||||||||| ||| |||| |||||||||  || ||||   |||||||  |||||||||||    
T  1588208 aggcttatttgatcttttggtccctcaaataattttaagttttcattttagtcccacaattaataaaatgtacgtttaaatccctcactttttcctccgt 1588109  T
Q  294 ataccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaa 356  Q
     |||||||||||| ||||| ||||| ||||| ||||||||||||||||||| ||||||||||||    
T  1588108 ttaccaaataaattatgactgttaagtttaaccccaaatgatgtctatggtagaccaaccttaa 1588045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 342 - 477
Target Start/End: Original strand, 7053321 - 7053456
Alignment:
Q  342 gtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaat 441  Q
    ||||||||| |||||||||| |||| ||||||||||||| || ||||| ||||||| ||||||||||||||||||||||||  || ||||||||||| ||    
T  7053321 gtggaccaatcttaagagtgatccaccatagatcctattaatttttttaatttaaatcgtttgatcttttttattaaaagaggatcgttagatcatgcat 7053420  T
Q  442 gtccgttgtatcttcccgtgagtcaacaacacttaa 477  Q
    |||   |||||||| | |||||||||||||||||||    
T  7053421 gtctactgtatctttcagtgagtcaacaacacttaa 7053456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 195 - 326
Target Start/End: Original strand, 390215 - 390346
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||| || |||||||  |||||||||||| |||||||||||||| |||| |||||||||| ||| |||||||||||||| | |||||||||     
T  390215 ggcttatttgattcattggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcatttcttcctccgtt 390314  T
Q  295 taccaaataaatcatgacggttaactttaacc 326  Q
    | ||||||||||| |||| ||||| |||||||    
T  390315 tgccaaataaatcctgactgttaagtttaacc 390346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 196 - 373
Target Start/End: Original strand, 1829752 - 1829928
Alignment:
Q  196 gcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtat 295  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||| |||| |||||||||| ||| |||| ||||||||  ||||||| ||| |    
T  1829752 gcttatttgatccaacggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttagtccctcactttttcctacgttt 1829851  T
Q  296 accaaataaatcatgacggttaac-tttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
      |||||||||   ||| |||||| |||||| | ||  |||||||| |||||||||| |||| ||||||||||| ||||    
T  1829852 gtcaaataaattccgactgttaacttttaactctaa--atgtctatcgtggaccaactttaaaagtggtccatcgtaga 1829928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 194 - 325
Target Start/End: Original strand, 2310920 - 2311051
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||||||||||   || ||||||||| |||||||||||||| |||| |||||||||| || |||||||||||||| |||||||||||     
T  2310920 aggcttatttgatccaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcagattttcctccga 2311019  T
Q  294 ataccaaataaatcatgacggttaactttaac 325  Q
     | ||||||||||| | || ||||||||||||    
T  2311020 ttgccaaataaatcctaacagttaactttaac 2311051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 193 - 324
Target Start/End: Original strand, 42871091 - 42871222
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||||||||||||||||||||||||   | ||||||||||||||||||||| || |||| |||||||||| || ||||||||||||||  ||||||||||    
T  42871091 aaggcttatttgatccaatggtcccctgattaatttcaaattttcattttgatcccacaattaataaaacgtacgttttggtccctcactttttcctccg 42871190  T
Q  293 tataccaaataaatcatgacggttaactttaa 324  Q
    | | ||||||||||| |||| ||||| |||||    
T  42871191 tttgccaaataaatcctgactgttaagtttaa 42871222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 195 - 351
Target Start/End: Original strand, 1188841 - 1188996
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||||| ||||||||||||||||||| |||| ||||||||| |||| |||||||||| ||  |||||||||||||  |||||||||||     
T  1188841 ggcttatttgatccaatagtccctcaaataatttcaagtttttattttggtcccacaattaataaaacgtacattttggtccctcactttttcctccgtt 1188940  T
Q  295 taccaaataaatcatgacggttaac-tttaacccaaatgatgtctatggtggaccaac 351  Q
    | |||||||||||  ||  |||||| |||||||| ||  |||||||||||| ||||||    
T  1188941 tgccaaataaatcccgaacgttaacttttaaccctaa--atgtctatggtgaaccaac 1188996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 194 - 324
Target Start/End: Original strand, 37882831 - 37882963
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||||| ||| |||| |||||||||| ||  |||||||||||||  |||||||||||    
T  37882831 aggcttatttgatttaatggtccctcaaataatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctcaccttttcctccgt 37882930  T
Q  294 ataccaaataaatca--tgacggttaactttaa 324  Q
     | ||||||||||||  |||| |||||||||||    
T  37882931 ttgccaaataaatcatttgactgttaactttaa 37882963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 1831383 - 1831285
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctcc 291  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||| |||| |||||||||| ||  |||||||||||||| |||||||||    
T  1831383 aaggcttatttgatccaatggtccctcaattaatttcaagttttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctcc 1831285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 4128990 - 4129117
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||| |||||||||  ||  ||||||||||| |  |||| ||||||    
T  4128990 aggcttatttgatccaatggttcctcaaataatttcaagttttcattttggtcccacaattaataaaatgtacattttggtcccttacttttttctccgt 4129089  T
Q  294 ataccaaataaatcatgacggttaactt 321  Q
     | |||||||||||  ||| ||||||||    
T  4129090 ttgccaaataaatcccgaccgttaactt 4129117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 195 - 351
Target Start/End: Complemental strand, 44503796 - 44503642
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||| ||||| |||| ||  |||||||||||||  |||||||| ||     
T  44503796 ggcttatttgattcaatagtccctcaaataatttcaagtttttattttggtctcacaattaat-aaacgtacattttggtccctcactttttcctctgtt 44503698  T
Q  295 taccaaataaatcatgacggttaac-tttaacccaaatgatgtctatggtggaccaac 351  Q
    | |||||||||||  ||| |||||| |||||||| ||  |||||||||||| ||||||    
T  44503697 tgccaaataaatcccgaccgttaacttttaaccctaa--atgtctatggtgaaccaac 44503642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 194 - 364
Target Start/End: Original strand, 40792748 - 40792914
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||  ||||||||   || |||||| || |||||||||||||| |||| |||||||||||||  ||||||||||||| ||||| ||||||    
T  40792748 aggcttatttgatttaatggtcctctaattaattttaagttttcattttggtcccacaattaataaaacatacattttggtccctcagatttttctccgt 40792847  T
Q  294 ataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtc 364  Q
     | |||||||||||  ||  ||||||||||||   ||  |||||||| ||||||||||||||| |||||||    
T  40792848 ttgccaaataaatcccga--gttaactttaactttaa--atgtctatagtggaccaaccttaaaagtggtc 40792914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 314 - 413
Target Start/End: Original strand, 56085465 - 56085562
Alignment:
Q  314 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||| ||  ||||||||||||||| |||||||||||||||||| ||||||||||||| ||  |||| |||||||||||||||| ||||||    
T  56085465 gttaactttaaccccaa--atgtctatggtggactaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgatttttttt 56085562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 309 - 423
Target Start/End: Original strand, 44498574 - 44498686
Alignment:
Q  309 tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 408  Q
    |||||||||||||||||   ||  |||||||||||||| ||||||||||||||||||| ||||||||||||| ||  |||| ||| |||||||||||| |    
T  44498574 tgacggttaactttaactttaa--atgtctatggtggatcaaccttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgattt 44498671  T
Q  409 tttttattaaaagat 423  Q
    ||||| |||||||||    
T  44498672 tttttcttaaaagat 44498686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 214 - 413
Target Start/End: Original strand, 53432079 - 53432277
Alignment:
Q  214 tccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaat-catgac 312  Q
    ||||| || ||||||||| |||||||||||||| || |  ||||||||| |||||||||||||||||  ||| ||| |||    ||||||||| | ||||    
T  53432079 tcccttaattaatttcaagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagtttgccttcgttggtcaaataaatccctgac 53432178  T
Q  313 ggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttt 412  Q
    |||||| |||||||| ||  |||||||||||| |||||| ||||||||||  || |||| | | |||| || ||||  |||| |||||||||||||||||    
T  53432179 ggttaagtttaaccccaa--atgtctatggtgaaccaactttaagagtggctcaccatacaccttattaattttttcaattttaaccgtttgatcttttt 53432276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 195 - 327
Target Start/End: Complemental strand, 37884395 - 37884263
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| ||| || | |||||||||  ||  ||||||||| | |  |||||||||||     
T  37884395 ggcttatttgattcaatggtccctcaaataattttaaattttcatttttgtcccataattaataaaatgtaccttttggtcctttactttttcctccgtt 37884296  T
Q  295 taccaaataaatcatgacggttaactttaaccc 327  Q
    | |||||||||||  ||| ||||| ||||||||    
T  37884295 tgccaaataaatccagactgttaagtttaaccc 37884263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 26933205 - 26933275
Alignment:
Q  7 tcgaagaatatgaaggtataatttcctcgacacttaaagtgccgatggattaaattgaatttcggcagttaa 78  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  26933205 tcgaagaaaatgaaggtataatttcctcggcacttaa-gtgccgatggattaaattggatttcggcagttaa 26933275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 337 - 455
Target Start/End: Complemental strand, 49896561 - 49896443
Alignment:
Q  337 ctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatca 436  Q
    ||||||||||||||||| ||||||||||||   |||||||| || ||  |||| |||||||||||||||| ||||||||||||||| ||   ||||||||    
T  49896561 ctatggtggaccaacctaaagagtggtccactgtagatcctgttaattattttaatttaaaccgtttgatattttttattaaaagagaaccattagatca 49896462  T
Q  437 tgaatgtccgttgtatctt 455  Q
    || |||||  |||||||||    
T  49896461 tgcatgtctattgtatctt 49896443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 327
Target Start/End: Original strand, 27847678 - 27847808
Alignment:
Q  197 cttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtata 296  Q
    ||||||||||| |||  | |||||||||||||||| |||| ||||||||| |||| |||||||||  ||| ||| ||||||| |  ||||| ||||| |     
T  27847678 cttatttgatctaataattcctcaaataatttcaagtttttattttggtcccacaattaataaaatgtatttttcggtcccttaatttttcttccgtttg 27847777  T
Q  297 ccaaataaatcatgacggttaactttaaccc 327  Q
    |||||||||||  ||||||||| ||||||||    
T  27847778 ccaaataaatccagacggttaagtttaaccc 27847808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 444
Target Start/End: Complemental strand, 28590880 - 28590774
Alignment:
Q  338 tatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcat 437  Q
    ||||||| |||||| ||||||||| | |||||||||||||||| ||  |||| || ||||| |||||||||||||||||||||||  |  ||||||||||    
T  28590880 tatggtgaaccaactttaagagtgattcatcatagatcctattaattattttaatataaactgtttgatcttttttattaaaagagtaccgttagatcat 28590781  T
Q  438 gaatgtc 444  Q
    | |||||    
T  28590780 gcatgtc 28590774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 223 - 351
Target Start/End: Complemental strand, 10168873 - 10168745
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaat-catgacggttaactt 321  Q
    ||||||||  |||||||||||||| |||| |||||||||     ||||| |||||||| |||||||||||| | |||||||||| |||||| ||||||||    
T  10168873 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatccatgacagttaactt 10168774  T
Q  322 taacccaaatgatgtctatggtggaccaac 351  Q
    ||||||  |  |||||||||||||||||||    
T  10168773 taaccccca-aatgtctatggtggaccaac 10168745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 413
Target Start/End: Complemental strand, 19750300 - 19750195
Alignment:
Q  306 tcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttga 405  Q
    ||||||| |||||||||||||  ||  ||||||||||||||| || ||||| ||| ||||| ||||||||||||| ||  |||| ||||||| |||||||    
T  19750300 tcatgaccgttaactttaaccttaa--atgtctatggtggacaaatcttaaaagttgtccaccatagatcctattaattattttaatttaaatcgtttga 19750203  T
Q  406 tctttttt 413  Q
    ||||||||    
T  19750202 tctttttt 19750195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 413
Target Start/End: Original strand, 19789506 - 19789611
Alignment:
Q  306 tcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttga 405  Q
    ||||||| |||||||||||||  ||  ||||||||||||||| || ||||| ||| ||||| ||||||||||||| ||  |||| ||||||| |||||||    
T  19789506 tcatgaccgttaactttaaccttaa--atgtctatggtggacaaatcttaaaagttgtccaccatagatcctattaattattttaatttaaatcgtttga 19789603  T
Q  406 tctttttt 413  Q
    ||||||||    
T  19789604 tctttttt 19789611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 307
Target Start/End: Original strand, 44501516 - 44501628
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||| ||| ||||||||||||||||||||| |||||||| ||||| || | |||||||||| || ||||  ||||||||  |||| ||| ||     
T  44501516 ggcttatttgaaccattggtccctcaaataatttcaagttttcattctggtcccataattaataaaacgtacgtttaagtccctcacttttttctctgtt 44501615  T
Q  295 taccaaataaatc 307  Q
    | |||||||||||    
T  44501616 tgccaaataaatc 44501628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 412
Target Start/End: Complemental strand, 53435852 - 53435655
Alignment:
Q  214 tccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcat-gac 312  Q
    ||||| || ||||||||| |||||||||||||| || |  |||||||||  ||||||||| ||||||  ||| |||||||    |||||||||| | |||    
T  53435852 tcccttaattaatttcaagttttcattttggtcccataagtaataaaactcatgttttggcccctcaagtttacctccgttggtcaaataaatccttgac 53435753  T
Q  313 ggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttt 412  Q
    |||||| ||||||   ||  ||||||||||| |||||||||||||||||||||| | ||||    ||| || ||||  |||| |||||||||||||||||    
T  53435752 ggttaagtttaactttaa--atgtctatggtagaccaaccttaagagtggtccaccgtagacttcattaattttttaaattttaaccgtttgatcttttt 53435655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 223 - 406
Target Start/End: Original strand, 23201872 - 23202055
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||| ||||||||| ||||||||||||||      |||||||||||||  ||||||||||| | |||||||||||   || ||||| |||    
T  23201872 taatttcatgtttttattttggtcccacatttaataaaaatggcattttggtccctcaccttttcctccgtttgccaaataaatcccaaccgttaagttt 23201971  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    ||   ||||||||| ||||||||| || | ||||||||||| || ||||| ||||||| ||  |||| ||||  ||||||||||    
T  23201972 aataaaaatgatgtttatggtggatcatctttaagagtggtacaccataggtcctattaattattttaatttcgaccgtttgat 23202055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 307 - 413
Target Start/End: Original strand, 26629902 - 26630005
Alignment:
Q  307 catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    ||||||||||||||||||||| ||  |||| ||||||| |||||| |||||||||||||| ||||| ||||||| ||  |||| || ||||| |||||||    
T  26629902 catgacggttaactttaaccccaa--atgtttatggtgaaccaac-ttaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgat 26629998  T
Q  407 ctttttt 413  Q
    |||||||    
T  26629999 ctttttt 26630005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 309 - 421
Target Start/End: Complemental strand, 52138799 - 52138686
Alignment:
Q  309 tgacggttaactttaaccc--aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    |||| ||||||||||||||  ||||| | |||||||| ||||||| |||||| ||||||| ||||||||||||| ||  || | ||||||||||||||||    
T  52138799 tgactgttaactttaacccctaaatg-tctctatggtagaccaactttaagaatggtccaccatagatcctattaattattctaatttaaaccgtttgat 52138701  T
Q  407 cttttttattaaaag 421  Q
     |||||| |||||||    
T  52138700 ttttttttttaaaag 52138686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 336 - 422
Target Start/End: Original strand, 13165633 - 13165718
Alignment:
Q  336 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 422  Q
    ||||||||||||||||||||||||||||||| ||||||    ||| ||  |||| ||||||||||||||||||||||| ||||||||    
T  13165633 tctatggtggaccaaccttaagagtggtccaccatagacttcattaattattttaatttaaaccgtttgatctttttt-ttaaaaga 13165718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 31968512 - 31968398
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||||||||| ||||||| ||||||  || |||||| || ||||||||||||||  ||| |||||||||| || |||||||||| |||  |||||||| |    
T  31968512 aaggcttattagatccaacggtcccctaattaattttaatttttcattttggtcctacaattaataaaacgtacgttttggtccttcactttttcctctg 31968413  T
Q  293 tataccaaataaatc 307  Q
    | | |||||||||||    
T  31968412 tttgccaaataaatc 31968398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 1190310 - 1190198
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||| ||| |||||||||||||||||| || |||||||||||||| || | |||||||||| || ||||  || |||||  |||| ||| ||     
T  1190310 ggcttatttgaaccattggtccctcaaataattttaagttttcattttggtcccataattaataaaacgtacgtttaagtacctcacttttttctctgtt 1190211  T
Q  295 taccaaataaatc 307  Q
    | |||||||||||    
T  1190210 tgccaaataaatc 1190198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 53205601 - 53205489
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||| || | ||||| |||||||||||| ||||||||||| ||| |||| |||| |||| |   ||||| ||||||||  |||||||||||     
T  53205601 ggcttatttgattcattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaataggcgttttagtccctcactttttcctccgtt 53205502  T
Q  295 taccaaataaatc 307  Q
    | |||||||||||    
T  53205501 tgccaaataaatc 53205489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 408
Target Start/End: Original strand, 4871629 - 4871704
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 408  Q
    ||||||||||||||||||||| |||||||||||| | ||||||||||| ||  |||| ||||||||| ||| ||||    
T  4871629 atgtctatggtggaccaacctaaagagtggtccaccgtagatcctattaattattttaatttaaaccttttaatct 4871704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 413
Target Start/End: Original strand, 40723262 - 40723442
Alignment:
Q  231 aattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaa 330  Q
    |||||||||||||||| || |  |||||||||  |||||||||||||| |  |||  ||||||    ||||||||||   || ||||| |||||||  ||    
T  40723262 aattttcattttggtcccataactaataaaactcatgttttggtcccttaggtttatctccgtcggtcaaataaatccatactgttaagtttaacctcaa 40723361  T
Q  331 tgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
      |||| ||||||||||||||||||||||||||| | ||||||||||||| ||  |||  || | || |||||||||||||||    
T  40723362 --atgtatatggtggaccaaccttaagagtggtctaccatagatcctattaattatttaaatgttaatcgtttgatctttttt 40723442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 373
Target Start/End: Complemental strand, 52241245 - 52241098
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  ||||||||||| |  |||| |||||||||| || |||||| | |||||| ||||||||||| | ||||||||||   ||| |||||||||    
T  52241245 taatttcatgttttcattttgattccacaattaataaaacgtacgttttgattcctcatcttttcctccgtttgccaaataaattccgaccgttaacttt 52241146  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    ||| | ||  || |||||||| ||||| |||||| |||||||||| |||||    
T  52241145 aactccaa--atatctatggt-gaccatccttaaaagtggtccatgataga 52241098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 385 - 475
Target Start/End: Complemental strand, 42872258 - 42872169
Alignment:
Q  385 tttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaacactt 475  Q
    ||||| ||||||||||||||||||||||||||||||||  || ||||||| ||| || ||   |||||||| | |||||||||||||||||    
T  42872258 ttttttatttaaaccgtttgatcttttttattaaaagaggatcgttagattatgcatatctactgtatctt-cagtgagtcaacaacactt 42872169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 198 - 304
Target Start/End: Complemental strand, 42872414 - 42872308
Alignment:
Q  198 ttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtatac 297  Q
    ||||||||| ||||||||||  || ||||| | | |||||||||||||| || | |||||||||  || ||||||||||||||  ||||||||||| | |    
T  42872414 ttatttgattcaatggtcccctaattaattaccatttttcattttggtcccataattaataaaatgtacgttttggtccctcactttttcctccgtttgc 42872315  T
Q  298 caaataa 304  Q
    |||||||    
T  42872314 caaataa 42872308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 54866720 - 54866619
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    |||||||| ||||||||||||||| |||| |||||||||    |||||| |||||| |  ||||||||||| | |||||||||||||||| ||||| |||    
T  54866720 taatttcatattttcattttggtc-cacaattaataaaaatggtgttttagtcccttacgttttcctccgtttgccaaataaatcatgactgttaagttt 54866622  T
Q  323 aac 325  Q
    |||    
T  54866621 aac 54866619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 33409618 - 33409577
Alignment:
Q  46 tgccgatggattaaattgaatttcggcagttaactgccgagg 87  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  33409618 tgccgatggatttaattgaatttcggcagttaactgccgagg 33409577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 87
Target Start/End: Original strand, 33410207 - 33410248
Alignment:
Q  46 tgccgatggattaaattgaatttcggcagttaactgccgagg 87  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  33410207 tgccgatggatttaattgaatttcggcagttaactgccgagg 33410248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 4871482 - 4871370
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||||| |||||||  |||||||||||  |||||||||||||   ||| |||||||||| |||||||  ||||| ||  |||| ||||||     
T  4871482 ggcttatttgatccattggtccccaaaataatttcatgttttcattttggttctacaattaataaaacgtatgtttaagtcccccacgtttttctccgtt 4871383  T
Q  295 taccaaataaatc 307  Q
    |  ||||||||||    
T  4871382 tgtcaaataaatc 4871370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 18884559 - 18884606
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  18884559 aatttcggcagttaactgccgagg-ggcatttgagtaatttactcgtgt 18884606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 472
Target Start/End: Complemental strand, 22161708 - 22161596
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  22161708 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaagattgttagatcatgcatgtccactgtatcttactg 22161609  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  22161608 tgaaccaacaaca 22161596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 472
Target Start/End: Complemental strand, 23317255 - 23317143
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  23317255 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 23317156  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  23317155 tgaaccaacaaca 23317143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 472
Target Start/End: Complemental strand, 25922331 - 25922219
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  25922331 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 25922232  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  25922231 tgaaccaacaaca 25922219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 413
Target Start/End: Complemental strand, 26496290 - 26496210
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||||| || |||| | ||||||| ||||||||||||| ||  || | |||||||||||||||| ||||||    
T  26496290 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatatttttt 26496210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 351
Target Start/End: Complemental strand, 33232785 - 33232662
Alignment:
Q  225 atttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaa 324  Q
    |||||| ||||| ||||||||| |||| |||||||||     ||||| |||||||| |||||||||||| | ||||||||||| |  | |||||||||||    
T  33232785 atttcatatttttattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatcttttccgttaactttaa 33232686  T
Q  325 cccaaatgatgtctatggtggaccaac 351  Q
    | |||   |||||||| ||||||||||    
T  33232685 ctcaa---atgtctattgtggaccaac 33232662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 49344129 - 49344013
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccc-tcatattttcctccg 292  Q
    |||||||||||||||||||||||   ||||||||| ||  ||| ||||||||| |||| |||||||||| |  ||||  ||||| |||  ||||||||||    
T  49344129 aggcttatttgatccaatggtcctctaaataattttaagcttttattttggtcccacaattaataaaacgtgggtttaagtcccttcactttttcctccg 49344030  T
Q  293 tataccaaataaatcat 309  Q
    | | |||||||||||||    
T  49344029 tttgccaaataaatcat 49344013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 308
Target Start/End: Complemental strand, 54485638 - 54485550
Alignment:
Q  220 aaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatca 308  Q
    |||||||||||| ||||||||||| || || | ||||||||||||  |||||| |||||||  ||||| ||||| | ||||||||||||    
T  54485638 aaataatttcaagttttcattttgatcccataattaataaaacattcgttttgatccctcaagttttcatccgtttgccaaataaatca 54485550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 333 - 412
Target Start/End: Original strand, 4714155 - 4714234
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttt 412  Q
    |||||||||||||| ||||||||||||||||||| ||||||    ||| |||||||  |||| |||| ||||||||||||    
T  4714155 atgtctatggtggatcaaccttaagagtggtccaccatagacttcattaatattttaaattttaaccatttgatcttttt 4714234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 309 - 423
Target Start/End: Original strand, 36845523 - 36845634
Alignment:
Q  309 tgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatct 408  Q
    ||||||| ||||||||||| ||  |||| |||| | ||||||| |||||||||||||| ||||| ||||||| ||  |||| || ||||| ||||||| |    
T  36845523 tgacggtcaactttaaccctaa--atgtttatgatagaccaacattaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgatat 36845620  T
Q  409 tttttattaaaagat 423  Q
    ||||| |||||||||    
T  36845621 ttttt-ttaaaagat 36845634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 351
Target Start/End: Complemental strand, 11438686 - 11438531
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||| |||| | |||||  | ||||||| || |||| |||||||||||| | |||||||||||   ||||||||||||||  ||||||||| |     
T  11438686 ggcttatttgttccattagtcccctatataatttgaagtttttattttggtctcataattaataaaacactcgttttggtccctcactttttcctccatt 11438587  T
Q  295 taccaaataaatc-atgacggttaactttaacccaaatgatgtctatggtggaccaac 351  Q
    | | |||||||||  ||||  |||| |||||||| ||  ||||||| |||||||||||    
T  11438586 tgctaaataaatctctgacttttaagtttaaccccaa--atgtctacggtggaccaac 11438531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 14201585 - 14201630
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  14201585 ttcggcagttaactgccgagg-ggcatttgagtaatttactcgtgtg 14201630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 21022946 - 21022991
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  21022946 ttcggcagttaactgccgagg-ggcatttgagtaatttactcgtgtg 21022991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 364
Target Start/End: Complemental strand, 23204043 - 23203904
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    |||||||| ||||||||||||||| ||||||||||||||     |||||||||| |||| |||| |||||| | |||| ||||||   |   ||||||||    
T  23204043 taatttcatattttcattttggtcccacatttaataaaaatggcgttttggtccgtcatctttttctccgtttgccaattaaatcccaagtattaacttt 23203944  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtc 364  Q
    ||| | ||  || ||||||||||| ||||||||| |||||||    
T  23203943 aactctaa--atatctatggtggatcaaccttaaaagtggtc 23203904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 47153427 - 47153472
Alignment:
Q  69 cggcagttaactgccga-ggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||    
T  47153427 cggcagttaactgccgatggaggcatttgagtaatttattggtgtg 47153472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 400
Target Start/End: Original strand, 22069370 - 22069437
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccg 400  Q
    ||||||||||||||| |||||||| |||||| || ||||||  ||||| |||||||| ||||| ||||    
T  22069370 atgtctatggtggacgaaccttaaaagtggttcaccatagactctattaatatttttaatttataccg 22069437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 421
Target Start/End: Original strand, 36243663 - 36243742
Alignment:
Q  342 gtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaag 421  Q
    ||||||||| |||||||||| |||| ||||||| ||||| |  ||||| | || |||||||||||||||| | |||||||    
T  36243663 gtggaccaatcttaagagtgttccaccatagattctattgaattttttaactttaaccgtttgatcttttattttaaaag 36243742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 421
Target Start/End: Complemental strand, 56157468 - 56157389
Alignment:
Q  342 gtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaag 421  Q
    ||||||||| |||||||||| |||| ||||||||||||| || ||||| | || |||  ||||||||||| | |||||||    
T  56157468 gtggaccaatcttaagagtgttccaccatagatcctattaatttttttaactttaactatttgatcttttattttaaaag 56157389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 406
Target Start/End: Complemental strand, 8682829 - 8682756
Alignment:
Q  333 atgtctatggtggaccaac-cttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    ||||||||||||||| ||  |||||||||||||||||||||||| |||| || ||||| |||| |||| ||||||    
T  8682829 atgtctatggtggactaaatcttaagagtggtccatcatagatcatattaat-tttttaatttcaaccctttgat 8682756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 410
Target Start/End: Complemental strand, 23103962 - 23103913
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttt 410  Q
    ||||||| ||||||||||||| || ||||| ||||||||||||||||||||    
T  23103962 tggtccaccatagatcctattaat-tttttaatttaaaccgtttgatcttt 23103913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 31242230 - 31242185
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||    
T  31242230 ttcggcagttaactgccgaag-ggcatttgagtaatttactcgtgtg 31242185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 197 - 307
Target Start/End: Original strand, 31965835 - 31965945
Alignment:
Q  197 cttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtata 296  Q
    ||||||||||| |||| ||||  || ||||||||| |||| ||| |||||  ||| |||| ||||  ||  |||||||||||||  ||||||||||| |     
T  31965835 cttatttgatctaatgatcccctaattaatttcaagtttttattctggtcctacaattaagaaaatgtacattttggtccctcactttttcctccgtttg 31965934  T
Q  297 ccaaataaatc 307  Q
    |||||||||||    
T  31965935 ccaaataaatc 31965945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 40833668 - 40833713
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||    
T  40833668 ttcggcagttaactgccgagg-ggtatttgagtaatttactcgtgtg 40833713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 43210477 - 43210439
Alignment:
Q  43 aagtgccgatggattaaattgaatttcggcagttaactg 81  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  43210477 aagtgccgatgaattaaattggatttcggcagttaactg 43210439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 46253501 - 46253456
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||| | ||||||||||||||||||| |||||    
T  46253501 ttcggcagttaactgccgatg-ggcatttgagtaatttactcgtgtg 46253456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 51037526 - 51037571
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||    
T  51037526 ttcggcagttaactgccgagg-gacatttgagtaatttactcgtgtg 51037571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 7708767 - 7708730
Alignment:
Q  336 tctatggtggaccaaccttaagagtggtccatcataga 373  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  7708767 tctatggtggaccaaccttaaaagtggtacatcataga 7708730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 10167422 - 10167535
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||| ||||   |||||||| |  ||||||||  |||||||||||||  |||| |||||||||  |   |||| |||||||||||||||||||||    
T  10167422 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaattgcattttagtccctcatattttcctccgt 10167521  T
Q  294 ataccaaataaatc 307  Q
     |  ||||||||||    
T  10167522 ttgtcaaataaatc 10167535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 20208525 - 20208481
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||    
T  20208525 ttcggcagttaactgccgagg-gacatttgagtaatttactcgtgt 20208481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 38698130 - 38698065
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtcc 276  Q
    |||||| | |||||||||| |||||||||||||||| || || ||||||||   ||||||||||||    
T  38698130 tggtcctttaaataatttccaattttcattttggtcccatatctaataaaagtcatgttttggtcc 38698065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 53204378 - 53204471
Alignment:
Q  214 tccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatc 307  Q
    ||||| ||||||||| |  ||||||||||| ||||||| |||||||||||   ||||| || |||||  |||| |||||| | |||||||||||    
T  53204378 tcccttaaataatttaatgttttcattttgatctcacaattaataaaacaggcgttttagttcctcaattttttctccgtttgccaaataaatc 53204471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 15999858 - 15999902
Alignment:
Q  68 tcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||||| || ||||| |||||||||| ||||    
T  15999858 tcggcagttaactgccgagggggtatttgggtaatttacttgtgt 15999902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 37296240 - 37296287
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||| ||| | ||||||||||||||||||| ||||    
T  37296240 aatttcggcagttaactgtcgaag-ggcatttgagtaatttactcgtgt 37296287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 385 - 421
Target Start/End: Complemental strand, 38555208 - 38555172
Alignment:
Q  385 tttttgatttaaaccgtttgatcttttttattaaaag 421  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  38555208 tttttaatttaaaccgtttgatcttttttatttaaag 38555172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 48807441 - 48807488
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||| |||||||||||||||| | ||||||||||||||||| ||||    
T  48807441 aatttcgacagttaactgccgagg-gacatttgagtaatttactcgtgt 48807488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 50447023 - 50446984
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttact 107  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  50447023 ttcggcagttaactgccgaaga-gcatttgagtaatttact 50446984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 351
Target Start/End: Complemental strand, 50548303 - 50548188
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatg 332  Q
    |||||||||||||| |||| ||||||| |   | ||||| |||||||| ||||||||| || | ||||||||||| |  | || ||||||||| |||       
T  50548303 ttttcattttggtcccacaattaataagaataacgttttagtccctcacattttcctctgtttgccaaataaatcctttccgtcaactttaactcaa--- 50548207  T
Q  333 atgtctatggtggaccaac 351  Q
    |||||||| ||||||||||    
T  50548206 atgtctattgtggaccaac 50548188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 309
Target Start/End: Original strand, 54865141 - 54865216
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcat 309  Q
    |||||||||||||| || | |||||||||  | |||||| |||||||| |||||||||||| |  ||||||||||||    
T  54865141 ttttcattttggtcccataattaataaaat-tgtgttttagtccctcacattttcctccgtttgtcaaataaatcat 54865216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 122; Significance: 3e-62; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 194 - 414
Target Start/End: Complemental strand, 54304 - 54083
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||| ||||||||||||||||||||| |||| ||||||||| |||| |||||||||| |  |||||||||||||| ||||||||||||    
T  54304 aggcttatttgatccattggtccctcaaataatttcaagttttaattttggtcgcacaattaataaaacgtgcgttttggtccctcaaattttcctccgt 54205  T
Q  294 ataccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
     | ||||||||||| |||| ||||| | ||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||  |||| ||    
T  54204 ttgccaaataaatcgtgactgttaagtataaccccaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattattttaat 54105  T
Q  393 ttaaaccgtttgatctttttta 414  Q
    |||||| ||||||| |||||||    
T  54104 ttaaactgtttgatttttttta 54083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 201 - 356
Target Start/End: Original strand, 52596 - 52749
Alignment:
Q  201 tttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaa 300  Q
    |||||| |||||||||   || ||||||||| ||||||||||| || |||| |||||||||  || |||||||||||||| ||||| |||||| | ||||    
T  52596 tttgattcaatggtcctctaattaatttcaagttttcattttgatcccacaattaataaaatgtacgttttggtccctcagatttttctccgtttgccaa 52695  T
Q  301 ataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaa 356  Q
    |||||||  ||| ||||||||||||   ||  |||| |||||||||||||||||||    
T  52696 ataaatcccgacagttaactttaactttaa--atgtatatggtggaccaaccttaa 52749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 1e-55; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 193 - 406
Target Start/End: Complemental strand, 45585129 - 45584915
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| ||  ||||||||| |||  ||||||||||    
T  45585129 aaggcttatttgatccaatagtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccttcactttttcctccg 45585030  T
Q  293 tataccaaataaatcatgacggttaacttt-aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttga 391  Q
    | | ||||||||||| |||| ||||| ||| ||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||| ||  |||| |    
T  45585029 tttgccaaataaatcctgaccgttaagtttaaacccaaatgatgtctatggtggcccaactttaagagtgctccaccatagatcctattaattattttaa 45584930  T
Q  392 tttaaaccgtttgat 406  Q
    | |||| ||||||||    
T  45584929 tataaatcgtttgat 45584915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 195 - 423
Target Start/End: Complemental strand, 50444816 - 50444590
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||  |||||||||||||| ||||||||||      
T  50444816 ggcttatttgattcaatggtccctcaaataatttcaaattttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccgat 50444717  T
Q  295 taccaaataaatcatgacggttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
    | |||||||||||   || |||||||||||| |||||  | ||||||| |||||||||||||||||| ||||||| |||| | |||| || || || |||    
T  50444716 tgccaaataaatccaaaccgttaactttaactccaaa--acgtctatgttggaccaaccttaagagt-gtccatcgtagaccttattaattttgttcatt 50444620  T
Q  394 taaaccgtttgatcttttttattaaaagat 423  Q
    | |||||||||||||||| | |||||||||    
T  50444619 ttaaccgtttgatcttttgttttaaaagat 50444590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 194 - 421
Target Start/End: Complemental strand, 15072909 - 15072682
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||| |||||||||   || ||||||||| |||||||||||||| |||| |||||||||| ||  ||||||||||| || |||||||||||    
T  15072909 aggcttatttgattcaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtacattttggtcccttattttttcctccgt 15072810  T
Q  294 ataccaaataaat-catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
     | |||||||||| |||| | |||||||||||||  ||  ||||||||||||||||||||| |||||||||||| | ||||  ||||| || || || ||    
T  15072809 ttgccaaataaatccatgtctgttaactttaacctcaa--atgtctatggtggaccaacctaaagagtggtccaccgtagactctattaattttcttaat 15072712  T
Q  393 ttaaaccgtttgatc-ttttttattaaaag 421  Q
    |||||  |||||||| ||||||||||||||    
T  15072711 ttaaattgtttgatctttttttattaaaag 15072682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 194 - 422
Target Start/End: Original strand, 15232749 - 15232976
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||| ||||   |||||||| |  ||||||||  |||||||||||||| || | |||||||||     ||||| |||||||| ||||||||| ||    
T  15232749 aggcttattagatcatttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgt 15232848  T
Q  294 ataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
     | |||||||||||||||| ||||| ||||||||||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| ||  |||| ||     
T  15232849 ttgccaaataaatcatgaccgttaagtttaacccaaatgatgtatatagtggaccaactttaaaagtggtccatcatagatcctattaattattttaata 15232948  T
Q  394 taaaccgtttgatcttttttattaaaaga 422  Q
    | ||||||||||| |||||| ||||||||    
T  15232949 tcaaccgtttgatatttttt-ttaaaaga 15232976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 190 - 371
Target Start/End: Original strand, 14470849 - 14471029
Alignment:
Q  190 tttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcct 289  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||| |||| |||||||||| || | ||  ||||||||  |||||||    
T  14470849 tttaaggcttatttgatccaatggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacggttaagtccctcactttttcct 14470948  T
Q  290 ccgtataccaaataaatcatgacg-gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcata 371  Q
     ||| | ||||||||||| |   | ||||| |||||||| ||  | |||||| ||||||||||||||||||||||||| ||||    
T  14470949 tcgtttgccaaataaatccttcggtgttaagtttaaccccaa--acgtctatagtggaccaaccttaagagtggtccaccata 14471029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 195 - 368
Target Start/End: Original strand, 27814290 - 27814462
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||| ||||||  |||||||||||||||||| |||||||||| |||  | | |||||||||| ||  |||||||||||||| |||||||| ||     
T  27814290 ggcttatttgttccaatcatccctcaaataatttcaagttttcattttagtcctataattaataaaacgtaccttttggtccctcattttttcctctgtt 27814389  T
Q  295 taccaaataaatcatgacggttaacttt-aacccaaatgatgtctatggtggaccaaccttaagagtggtccatc 368  Q
    | |||||||||||  ||||||||||||| ||| | ||  ||||||||||||||||||| |||| |||||||||||    
T  27814390 tgccaaataaatcccgacggttaacttttaactctaa--atgtctatggtggaccaactttaaaagtggtccatc 27814462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 197 - 413
Target Start/End: Complemental strand, 35943563 - 35943347
Alignment:
Q  197 cttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtata 296  Q
    ||||||||||  ||||||| || ||||||||||||||||| ||||||||| |||| |||||||||| ||  ||||||| |||||  ||||||| ||| |     
T  35943563 cttatttgatttaatggtctcttaaataatttcaaatttttattttggtcccacaattaataaaacgtacattttggt-cctcactttttccttcgtttg 35943465  T
Q  297 ccaaataaat--catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattt 394  Q
    ||||||||||  | || | ||||| |||||||| ||  ||||||||||||||||||||||||||||| |||| |||||| | |||| | |||||| ||||    
T  35943464 ccaaataaatcccctggctgttaagtttaaccctaa--atgtctatggtggaccaaccttaagagtgatccaccatagaccttatt-aaattttttattt 35943368  T
Q  395 --aaaccgtttgatctttttt 413  Q
      |||||||||||||||||||    
T  35943367 taaaaccgtttgatctttttt 35943347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 223 - 404
Target Start/End: Complemental strand, 16965217 - 16965035
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    |||||||  ||||||||||||||| |||| |||||||||   | ||||| |||||| | |||||| ||||| || |||||||||   || |||||| |||    
T  16965217 taatttcttattttcattttggtcccacaattaataaaaatgacgttttagtcccttacattttcttccgtttatcaaataaattccgatggttaagttt 16965118  T
Q  323 aaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttg 404  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||| ||||||||||||| ||  |||| |||| |||||||||    
T  16965117 aaccccaaatgatgtatatggtggaccaactttaagagtggtccaccatagatcctattaattattttaatttcaaccgtttg 16965035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 15071339 - 15071452
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||| ||||| |||||||  |||||||||||| |||||||||||||| || | |||||||||| |||||||||||||||||  |||||||||||    
T  15071339 aggcttatttaatccattggtcccctaaataatttcaagttttcattttggtcacataattaataaaacgtatgttttggtccctcactttttcctccgt 15071438  T
Q  294 ataccaaataaatc 307  Q
     |||||||||||||    
T  15071439 ttaccaaataaatc 15071452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 194 - 410
Target Start/End: Complemental strand, 41874090 - 41873875
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||| |||||| ||||||||||| ||||||| | ||||||| ||||||||| | |||||||||  ||| |||||| || | |  |||||||||||    
T  41874090 aggcttattagatccattggtccctcaattaatttccatttttcatcttggtctcataattaataaaaagtatcttttggccctttagcttttcctccgt 41873991  T
Q  294 ataccaaataaat-catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
     |||||||||||| | ||   ||||| |||||||  ||  |||||||||||||||||||||||||||||||||| ||||||    ||| || ||||  ||    
T  41873990 ttaccaaataaatccttggttgttaagtttaaccacaa--atgtctatggtggaccaaccttaagagtggtccaccatagacttcattaattttttaaat 41873893  T
Q  393 ttaaaccgtttgatcttt 410  Q
    || |||||||||||||||    
T  41873892 tttaaccgtttgatcttt 41873875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 194 - 322
Target Start/End: Complemental strand, 46111607 - 46111479
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||| ||||||||||| |||||||||||| |||| ||||||||| |||| |||||||||| ||  ||||||| |||||| ||||||| |||    
T  46111607 aggcttatttgattcaatggtcccttaaataatttcaagtttttattttggtcccacaattaataaaacgtaccttttggttcctcattttttccttcgt 46111508  T
Q  294 ataccaaataaatcatgacggttaacttt 322  Q
     | |||||||||||  ||| |||||||||    
T  46111507 ttgccaaataaatcccgactgttaacttt 46111479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 373
Target Start/End: Original strand, 16963860 - 16964008
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||||||||||||| |||| |||||||||    |||||| ||||||||| ||||||||||| | ||||||||||  |||| |||||||||    
T  16963860 taatttcatgttttcattttggtcccacaattaataaaaatggtgttttagtccctcatcttttcctccgtttgccaaataaatgctgactgttaacttt 16963959  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    ||| | ||  |||| |||| |||||||||||||| ||||||||||||||||    
T  16963960 aactctaa--atgtttatgatggaccaaccttaaaagtggtccatcataga 16964008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 52627509 - 52627579
Alignment:
Q  191 ttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaa 261  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||    
T  52627509 ttaaggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaa 52627579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 24499774 - 24499661
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||    |||||||  |||||||||||| ||||||||||||||||||| ||||||||||  | ||||||||||||||  |||||||||||    
T  24499774 aggcttatttgatttgttggtcccctaaataatttcaagttttcattttggtctcacaattaataaaactcacgttttggtccctcactttttcctccgt 24499675  T
Q  294 ataccaaataaatc 307  Q
     |||||||||||||    
T  24499674 ttaccaaataaatc 24499661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 38633119 - 38633195
Alignment:
Q  7 tcgaagaatatgaaggtataatttcctcgacacttaaagtgccgatggattaaattgaatttcggcagttaactgccg 84  Q
    |||||||| |||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  38633119 tcgaagaaaatgaaggtataatttcctcggcacttaa-gtggcgatggattaaattgaatttcggcagttaactgccg 38633195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 472
Target Start/End: Original strand, 12665944 - 12666064
Alignment:
Q  352 cttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgta 451  Q
    ||||||||||||||| |||||||| |||| || || || |||||||||||||||||||||||| |||||||||| |||||||||||| ||||   |||||    
T  12665944 cttaagagtggtccaccatagatcttattaattttgttaatttaaaccgtttgatcttttttaataaaagataaatgttagatcatgtatgtttattgta 12666043  T
Q  452 tcttcccgtgagtcaacaaca 472  Q
    |||| |  ||| |||||||||    
T  12666044 tcttacaatgaatcaacaaca 12666064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 52628991 - 52628879
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||||||| |  ||||||| |||||||||||| |||| ||||||||| |||| |||||||||| ||  |||||||||||||| |||||||||||     
T  52628991 ggcttatttgatctatcggtcccttaaataatttcaagttttaattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtt 52628892  T
Q  295 taccaaataaatc 307  Q
    | |||||||||||    
T  52628891 tgccaaataaatc 52628879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 333 - 422
Target Start/End: Complemental strand, 9226196 - 9226107
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 422  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||| ||  |||| |||||||  |||||||||||||||||||||||    
T  9226196 atgtctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttaaattgtttgatcttttttattaaaaga 9226107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 253 - 413
Target Start/End: Original strand, 46110338 - 46110496
Alignment:
Q  253 ttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaacc 352  Q
    |||||||||| ||  |||||||| ||||  |||| |||||| | | |||||||||  ||| |||||||||||| | ||  || |||||||||||||||||    
T  46110338 ttaataaaacgtactttttggtcactcaagtttttctccgtttgctaaataaatctcgactgttaactttaactctaa--atatctatggtggaccaacc 46110435  T
Q  353 ttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||||| |||| | |||| || || || |||| ||||||||||||||||||    
T  46110436 ttaagagtggtccatcgtagaccttattaattttgttaattttaaccgtttgatctttttt 46110496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 223 - 373
Target Start/End: Complemental strand, 49802985 - 49802837
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||||||||||||| |||| |||||||||   | ||||| ||||||||| |||| |||||| | |||||||||||  ||||||||||||     
T  49802985 taatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccctcatctttttctccgtttgccaaataaatcccgacggttaacttc 49802886  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    ||| | ||  |||||||||||| ||||||||||| ||||||| ||| ||||    
T  49802885 aactctaa--atgtctatggtgtaccaaccttaaaagtggtctatcgtaga 49802837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 413
Target Start/End: Complemental strand, 34352075 - 34351866
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||||| |||||| ||||||||| || |||||||||||||| |||| |||||||||  ||  |||||||||||||  ||||||| |||    
T  34352075 aggcttatttgatccaatagtcccttaaataattttaagttttcattttggtcccacaattaataaaatgtaccttttggtccctcactttttcctacgt 34351976  T
Q  294 ataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
     |  |||| ||||| ||| ||||||  ||||       || |||||||||||||||| ||||||||||||||| |||| | | |||| |||||| | |||    
T  34351975 ttgtcaaa-aaatcctgatggttaaacttaa-------ga-gtctatggtggaccaa-cttaagagtggtccaccataaaccttattaatatttctaatt 34351886  T
Q  394 taaaccgtttgatctttttt 413  Q
    | |||| |||| ||||||||    
T  34351885 ttaaccctttggtctttttt 34351866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 402
Target Start/End: Original strand, 41872572 - 41872780
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    ||||||||||||||| ||||||||||  | ||||||||| ||||||||||| ||  ||| |||||||||| || ||||  ||| ||||  ||||||||||    
T  41872572 aaggcttatttgatctaatggtcccttgattaatttcaacttttcattttgatcatacaattaataaaacgtacgtttaagtctctcactttttcctccg 41872671  T
Q  293 tataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
    | | |||||||||||||    ||||| ||||||||  |  |||||||||||| ||||| ||||||| | || || |||||| | |||| |  ||||| ||    
T  41872672 tttgccaaataaatcattggtgttaagtttaaccccca-aatgtctatggtgaaccaatcttaagattagttcaccatagaccttattaaattttttaat 41872770  T
Q  393 ttaaaccgtt 402  Q
    ||||||||||    
T  41872771 ttaaaccgtt 41872780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 193 - 373
Target Start/End: Original strand, 23091347 - 23091527
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    ||||||||||||||| | |||||||  || |||||||| |||||||||||||| | ||| |||||||||| || ||||||||| ||||  |||| |||||    
T  23091347 aaggcttatttgatctattggtcccctaactaatttcacattttcattttggttttacaattaataaaacgtacgttttggtcactcacttttttctccg 23091446  T
Q  293 tataccaaataaat--catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    | | ||||||||||  |  | | ||||| ||||| |  ||  ||||||||||||||||||| |||| ||||||||| ||||||    
T  23091447 tttgccaaataaatccctagtctgttaagtttaatctcaa--atgtctatggtggaccaactttaaaagtggtccaccataga 23091527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 189 - 412
Target Start/End: Original strand, 49801609 - 49801832
Alignment:
Q  189 ttttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcc 288  Q
    |||| ||||||||| ||||   |||||||| |  |||||| | ||||||||||||||| |||| |||||||||    ||||||| |||||||  |||  |    
T  49801609 tttttaggcttattagatcatttggtcccttatttaattttatattttcattttggtcccacaattaataaaaatggtgttttgatccctcacgtttgtc 49801708  T
Q  289 tccgtataccaaataaatcatgacggttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatattt 387  Q
    || || | |||||||||||  ||| ||||| ||||||| |||||||||| || |||  ||||||||||| ||||||||| |||| || ||||| ||  ||    
T  49801709 tctgtttgccaaataaatcc-gactgttaattttaacctcaaatgatgtttacggtaaaccaaccttaaaagtggtccaccataaattctattaattatt 49801807  T
Q  388 ttgatttaaaccgtttgatcttttt 412  Q
    || |||||||||||||||| |||||    
T  49801808 ttaatttaaaccgtttgattttttt 49801832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 307
Target Start/End: Complemental strand, 14477909 - 14477797
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||||||||||||||  ||||||||| || |||||| |||| || |||| |||||||||| || ||||  ||||||||  |||| ||||||     
T  14477909 ggcttatttgatccaatggtcccataaataattttaagttttcactttgatcccacaattaataaaacgtacgtttaagtccctcacttttttctccgtt 14477810  T
Q  295 taccaaataaatc 307  Q
    | |||||||||||    
T  14477809 tgccaaataaatc 14477797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 38632591 - 38632520
Alignment:
Q  7 tcgaagaatatgaaggtataatttcctcgacacttaaagtgccgatggattaaattgaatttcggcagttaac 79  Q
    |||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||||    
T  38632591 tcgaagaaaatgaatgtataatttcctcggcacttaa-gtgccgatggattaaattggatttcggaagttaac 38632520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 201 - 326
Target Start/End: Original strand, 50442628 - 50442754
Alignment:
Q  201 tttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaa 300  Q
    ||||||||||| |||||||||||||||| |  |||| |||||||||||||| |||||||||| ||  ||||| | |||||  |||||||| || |  |||    
T  50442628 tttgatccaattgtccctcaaataattttatgtttttattttggtctcacaattaataaaacgtacattttgattcctcaccttttcctctgtttgtcaa 50442727  T
Q  301 ataaatc-atgacggttaactttaacc 326  Q
    |||||||  |||| |||||||||||||    
T  50442728 ataaatctttgactgttaactttaacc 50442754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 422
Target Start/End: Complemental strand, 6049406 - 6049317
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 422  Q
    |||||||||||||||||| || || ||||||||| | |||||||| || ||  |||| |||||||||| ||||| |||||||||||||||    
T  6049406 atgtctatggtggaccaatctaaatagtggtccaccgtagatcctgttaattattttaatttaaaccgattgatattttttattaaaaga 6049317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 414
Target Start/End: Complemental strand, 52078125 - 52078044
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 414  Q
    |||||||||||| |||||||||||||||| | || ||||||||||||| ||  |||| |||| ||||||||||| |||||||    
T  52078125 atgtctatggtgaaccaaccttaagagtgatacaccatagatcctattaattattttaattttaaccgtttgatttttttta 52078044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 13147397 - 13147333
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaa 397  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||| ||  |||| |||||||    
T  13147397 atgtctatggtggaccaaccttaatagtggtccaccatagatcctattaattattttaatttaaa 13147333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 413
Target Start/End: Complemental strand, 15746747 - 15746668
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||| ||  |||| |||| |||| |||||||| ||||    
T  15746747 atgtctatggtggaccaatcttaagagtggtccaccatagatcctattaat-cttttaattttaaccctttgatctatttt 15746668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 421
Target Start/End: Complemental strand, 18821720 - 18821632
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaag 421  Q
    ||||||||||||||| |||||||||||||||| | || |||||||||| || ||||  | || |||||||||||||||| | |||||||    
T  18821720 atgtctatggtggactaaccttaagagtggtctaccaaagatcctattaattttttaaaatttaaccgtttgatcttttgttttaaaag 18821632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 325 - 373
Target Start/End: Original strand, 34350240 - 34350288
Alignment:
Q  325 cccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  34350240 cccaaatgatgtctatggtggatcaaccttaagagtggtccaccataga 34350288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 44278439 - 44278359
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaata 303  Q
    ||||||||| |||||||||||||| |||  |||||||||| || ||||||||||||||| |||| |||||| | |||||||    
T  44278439 taatttcaagttttcattttggtcccacgattaataaaacgtacgttttggtccctcatttttttctccgtttgccaaata 44278359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 333 - 413
Target Start/End: Original strand, 48527669 - 48527749
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    ||||||||||| ||||||| |||||||||||||| |||||||| |||  ||  |||| |||||||| ||||||||||||||    
T  48527669 atgtctatggtcgaccaactttaagagtggtccaccatagatcttatcaattattttaatttaaactgtttgatctttttt 48527749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 28050465 - 28050539
Alignment:
Q  342 gtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttatt 416  Q
    ||||||||| |||||||||| |||| ||||||||||||| || || || | || |||||||||||||||||||||    
T  28050465 gtggaccaatcttaagagtgttccaccatagatcctattgattttcttaactttaaccgtttgatcttttttatt 28050539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 223 - 423
Target Start/End: Original strand, 46467172 - 46467370
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatca-tgacggttaactt 321  Q
    ||||||||| |||||||||||||| || |  |||||||||  |||||| |||||||||  ||| ||||||| |  ||||||||||  |  | ||||| ||    
T  46467172 taatttcaagttttcattttggtcccataactaataaaactcatgtttcggtccctcaggtttgcctccgtttgtcaaataaatccctcgctgttaagtt 46467271  T
Q  322 taacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaag 421  Q
    |||||  ||  ||||||||||||||||||| |||| |||| |||| | |||||  |||| | |||||| |||||||||||||||| | |||| | |||||    
T  46467272 taaccataa--atgtctatggtggaccaacattaaaagtgatccaccgtagatgttatt-aaatttttaatttaaaccgtttgatatattttctaaaaag 46467368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 20069989 - 20069924
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtcc 276  Q
    ||||||||||| |||||||   ||||||||||||||||| || |||||||||| ||||||||||||    
T  20069989 tggtccctcaattaatttcccgttttcattttggtctcatatctaataaaacacatgttttggtcc 20069924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 422
Target Start/End: Original strand, 26802075 - 26802164
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 422  Q
    ||||||| |||| ||||||||||||||| |||||  ||||||| |||| ||  |||| ||||||||||||||||  ||||| ||||||||    
T  26802075 atgtctaaggtgaaccaaccttaagagttgtccactatagatcatattaatcattttaatttaaaccgtttgattattttttttaaaaga 26802164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 414
Target Start/End: Original strand, 51445725 - 51445806
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttta 414  Q
    |||||||||||||| |||| |||| | ||||||| ||||||||||||| ||  || | |||||||||||||||| |||||||    
T  51445725 atgtctatggtggatcaactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttttta 51445806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 413
Target Start/End: Original strand, 14478401 - 14478481
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||||| || |||| | ||||||| ||||||||||||| ||  || | |||||||||||||||| ||||||    
T  14478401 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttttt 14478481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 413
Target Start/End: Complemental strand, 48097013 - 48096933
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||| ||  |||  || | || |||||||||||||||    
T  48097013 atgtatatggtggaccaaccttaagagtggtctaccatagatcctattaattatttaaatattaatcgtttgatctttttt 48096933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 318
Target Start/End: Complemental strand, 51042444 - 51042337
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaa-tcat 309  Q
    |||||||| || ||||||| |||||||||||||||| |||| ||||||||||  | ||||| ||||||| | |||| |||||| | ||||||||| ||||    
T  51042444 tggtcccttaattaatttccaattttcattttggtcccacaattaataaaactcacgttttagtccctc-tttttttctccgtttgccaaataaattcat 51042346  T
Q  310 gacggttaa 318  Q
    ||| |||||    
T  51042345 gaccgttaa 51042337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 3617478 - 3617431
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||    
T  3617478 atgtctatggtgaaccaaccttaagagtggtccactatagatcctatt 3617431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 369 - 472
Target Start/End: Original strand, 8027403 - 8027506
Alignment:
Q  369 atagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaac 468  Q
    ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | ||||  ||||    
T  8027403 atagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactgtgaaccaac 8027502  T
Q  469 aaca 472  Q
    ||||    
T  8027503 aaca 8027506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 10722354 - 10722291
Alignment:
Q  336 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaacc 399  Q
    |||||| ||||||||||| |||||||||||||||||||| ||| | || ||||| |||||||||    
T  10722354 tctatgatggaccaacctaaagagtggtccatcatagattctactaatttttttaatttaaacc 10722291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 380
Target Start/End: Complemental strand, 15234131 - 15233977
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||||||||||||| |||| |||||||||     ||||| |||||||| |||||||||||| | |||||||||||  ||| ||| |||||    
T  15234131 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatcccgactgtt-acttt 15234033  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
    |||   ||  ||||||||  | |||||| ||| ||||||||||||| |||| ||||||    
T  15234032 aacttcaa--atgtctataatagaccaatcttcagagtggtccatcgtagaccctatt 15233977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 87
Target Start/End: Original strand, 47586218 - 47586256
Alignment:
Q  49 cgatggattaaattgaatttcggcagttaactgccgagg 87  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  47586218 cgatggatttaattgaatttcggcagttaactgccgagg 47586256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 336 - 413
Target Start/End: Original strand, 13894752 - 13894828
Alignment:
Q  336 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    ||||||||| |||||||| |||||| ||| | |||||||||| || ||  |||| |||||||||||||||||||||||    
T  13894752 tctatggtg-accaacctaaagagttgtctaccatagatcctgttaattattttaatttaaaccgtttgatctttttt 13894828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 16123284 - 16123397
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||| || || |||   ||||||||| || |||||||||||||  |||| |||||||||   | ||||| ||||||||| ||||| |||||    
T  16123284 aggcttatttgattcattgatcctctaaataatttaaagttttcattttggttccacaattaataaaattcacgttttagtccctcattttttcttccgt 16123383  T
Q  294 ataccaaataaatc 307  Q
     | |||||||||||    
T  16123384 ttgccaaataaatc 16123397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 47585692 - 47585651
Alignment:
Q  46 tgccgatggattaaattgaatttcggcagttaactgccgagg 87  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  47585692 tgccgatggatttaattgaatttcggaagttaactgccgagg 47585651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 50268551 - 50268514
Alignment:
Q  43 aagtgccgatggattaaattgaatttcggcagttaact 80  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  50268551 aagtgccgatggattaaattggatttcggcagttaact 50268514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 33369315 - 33369247
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaa 261  Q
    ||||||||||||||||||||||| |  || ||||||||| | |||||||||||| || | |||||||||    
T  33369315 aaggcttatttgatccaatggtctcctaattaatttcaagtattcattttggtcccataattaataaaa 33369247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 42290314 - 42290267
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| ||||    
T  42290314 aatttcggcagttaactgccaagg-ggcatttgagtaatttactcgtgt 42290267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 409
Target Start/End: Complemental strand, 44999443 - 44999367
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctt 409  Q
    |||||||||||||||||| | |||||||||| || |||||||| |||| ||  |||| | ||||||| |||||||||    
T  44999443 atgtctatggtggaccaatcgtaagagtggttcaccatagatcttattaattattttaacttaaaccatttgatctt 44999367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 42244657 - 42244712
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccct 278  Q
    ||||||||||||||||||||| || || | ||||||||||  ||||||||||||||    
T  42244657 taatttcaaattttcattttgatcccataattaataaaactcatgttttggtccct 42244712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 13535604 - 13535646
Alignment:
Q  43 aagtgccgatggattaaattgaatttcggcagttaactgccga 85  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||    
T  13535604 aagtgccgatgaattaaattggatttcgacagttaactgccga 13535646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 13761105 - 13761146
Alignment:
Q  70 ggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  13761105 ggcagttaactgccgagg-ggcatttgagtaatttactcgtgt 13761146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 19914481 - 19914436
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  19914481 ttcggaagttaactgccgagg-ggcatttgagtaatttactcgtgtg 19914436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 406
Target Start/End: Complemental strand, 5613082 - 5612993
Alignment:
Q  314 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    |||||||||||||| ||  |||| ||||||||| || | |||| |||| |||| ||||||||||||| ||  |||| ||||||||||||||||    
T  5613082 gttaactttaaccccaa--atgtttatggtggatcacctttaa-agtgatccaccatagatcctattaattattttaatttaaaccgtttgat 5612993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 19915373 - 19915417
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||    
T  19915373 ttcggcagttaactgccgaag-ggcatttgagtaatttactcgtgt 19915417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 20064190 - 20064255
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtcc 276  Q
    ||||||||||| |||||||   |||||||||||||| || || |||||||||| | ||||||||||    
T  20064190 tggtccctcaattaatttcccgttttcattttggtcccatatctaataaaacacacgttttggtcc 20064255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 43011841 - 43011797
Alignment:
Q  68 tcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    |||||||||||||||||||| || |||||||||||||||| |||||    
T  43011841 tcggcagttaactgccgagg-ggtatttgagtaatttactcgtgtg 43011797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 413
Target Start/End: Complemental strand, 46318576 - 46318519
Alignment:
Q  356 agagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    ||||||||||| ||||||||||||| |   |||| ||||||| |||||||||||||||    
T  46318576 agagtggtccaccatagatcctattaaatattttaatttaaatcgtttgatctttttt 46318519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 47652741 - 47652697
Alignment:
Q  68 tcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    |||||||||||||||||||| | ||||||||||||||||| |||||    
T  47652741 tcggcagttaactgccgagg-gacatttgagtaatttactcgtgtg 47652697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 49429193 - 49429237
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||||||||||||||| || |||||||||||||||||| ||||    
T  49429193 ttcggcagttaactgccgaaga-gcatttgagtaatttactcgtgt 49429237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 50036862 - 50036818
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||||    
T  50036862 ttcggcagttaactgccgagg-gacatttgagtaatttacttgtgt 50036818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 5845463 - 5845507
Alignment:
Q  43 aagtgccgatggattaaattgaatttcggcagttaactgccgagg 87  Q
    |||||||||||||| |||||| ||||||||| |||| ||||||||    
T  5845463 aagtgccgatggatgaaattggatttcggcaattaattgccgagg 5845507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 314 - 380
Target Start/End: Original strand, 9482574 - 9482637
Alignment:
Q  314 gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
    |||||||||||||||||||   ||||  |||||||||| ||||||||||| || |||||||| ||||    
T  9482574 gttaactttaacccaaatg---tctacagtggaccaactttaagagtggttcaccatagatcttatt 9482637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 19161907 - 19161868
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttact 107  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  19161907 ttcggcagttaactgccgaa-aggcatttgagtaatttact 19161868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 110; Significance: 4e-55; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 196 - 407
Target Start/End: Complemental strand, 125350 - 125137
Alignment:
Q  196 gcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtat 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||  |||||||||||||  ||||||||||| |    
T  125350 gcttatttgatccaatggtccctcaaataatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgttt 125251  T
Q  296 accaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt-catatttttgatt 393  Q
     ||||||||||| | |||||||| ||||| |||||||||||| |||| |||||||||||||| ||||||||| |||||| | ||||  || ||||| |||    
T  125250 gccaaataaatcctaacggttaagtttaaccccaaatgatgtatatgatggaccaaccttaaaagtggtccaccatagaccttattaaatttttttaatt 125151  T
Q  394 taaaccgtttgatc 407  Q
    |||||| |||||||    
T  125150 taaaccctttgatc 125137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 195 - 425
Target Start/End: Original strand, 123967 - 124194
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| |||||||||| ||  |||||||||||||  |||||||| ||     
T  123967 ggcttatttgatccaatggtccttcaaataatttcaagttttcattttggtcccacaattaataaaacgtacattttggtccctcactttttcctctgtt 124066  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattt 394  Q
    | ||||||||||| | |||||||| |||||||| ||  || ||||||||||||||||||||||||||||||| |||||||| |||| | ||| || ||||    
T  124067 tgccaaataaatccttacggttaagtttaaccccaa--atatctatggtggaccaaccttaagagtggtccaccatagatcgtatt-aaattgttaattt 124163  T
Q  395 aaaccgtttgatcttttttattaaaagataa 425  Q
    ||| |||||||||| |||| | |||||||||    
T  124164 aaatcgtttgatctattttttaaaaagataa 124194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 6e-51; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 194 - 412
Target Start/End: Complemental strand, 38242635 - 38242417
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||||| || |||| |||||||||| ||  |||||||||||||  ||||  || ||    
T  38242635 aggcttatttgattcaaaggtccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtaccttttggtccctcacttttttatctgt 38242536  T
Q  294 ataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
     | ||||||||||| | || ||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| || ||||| ||  |||| |||    
T  38242535 ttgccaaataaatcctcacagttaagtttaactcaaatgatgtctatggtggaccaaccttaagagtggtccaccataaattctattaattattttaatt 38242436  T
Q  394 taaaccgtttgatcttttt 412  Q
    ||||||||||||| |||||    
T  38242435 taaaccgtttgattttttt 38242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 195 - 419
Target Start/End: Complemental strand, 12108101 - 12107874
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||| |||| |||||| |||||||||||| |||||||||||||| ||||  ||||||||||||| |||||||||||||  |||||||||||     
T  12108101 ggcttatttgattcaatagtcccttaaataatttcaagttttcattttggtcccacaactaataaaacatatattttggtccctcactttttcctccgtt 12108002  T
Q  295 taccaaataaatcatgacgg---ttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttg 390  Q
    | ||||||||   || ||||   |||| |||||||| ||||||| | ||||||||||||||||||| ||||||||| |||||| ||||||  | |||||     
T  12108001 tgccaaataataaatcacgggtgttaaatttaaccccaaatgatatttatggtggaccaaccttaaaagtggtccaccatagaccctatt-tttttttta 12107903  T
Q  391 atttaaaccgtttgatcttttttattaaa 419  Q
    || ||||||||||||||||||||||||||    
T  12107902 atataaaccgtttgatcttttttattaaa 12107874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 194 - 373
Target Start/End: Original strand, 40244184 - 40244360
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||| |||||||||| ||  ||||||||||||| ||||||||||||    
T  40244184 aggcttatttgatccattggtcccttaaataatttcaagttttcattttggtctcacaattaataaaacgtacattttggtccctcaaattttcctccgt 40244283  T
Q  294 ataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
     | |||||| |||  |||| ||||||||||||   ||   ||||||||||||||||| ||||| ||||||||||| ||||    
T  40244284 ttgccaaat-aattttgacagttaactttaacttcaa--gtgtctatggtggaccaaacttaaaagtggtccatcgtaga 40244360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 194 - 325
Target Start/End: Original strand, 18197144 - 18197275
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||| |||| |||||||||| ||  |||||||||||||| |||||||||||    
T  18197144 aggcttatttgatccaaatgtccctcaaataatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgt 18197243  T
Q  294 ataccaaataaatcatgacggttaactttaac 325  Q
     | |||||||||||  ||| ||||||||||||    
T  18197244 ttgccaaataaatccagaccgttaactttaac 18197275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 233 - 406
Target Start/End: Complemental strand, 10732209 - 10732036
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatg 332  Q
    |||||||||||||| || | |||||||||     ||||| |||||||| |||||||||||| ||||||||||||   ||||||||| |||||||||||||    
T  10732209 ttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctccgtttaccaaataaattccgacggttaagtttaacccaaatg 10732110  T
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||| ||  |||| ||||  ||||||||||    
T  10732109 atgtctatggtggaccaacctttagagcggtccaccatagatcctattaattattttaatttcgaccgtttgat 10732036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 193 - 406
Target Start/End: Original strand, 3208480 - 3208693
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    ||||||||||| ||||| ||||||   || ||||||| | |||||||||||||| || | |||||||||| || |||||| ||||| || ||||||||||    
T  3208480 aaggcttatttaatccattggtcctctaattaatttccatttttcattttggtcccataattaataaaacgtacgttttgatcccttattttttcctccg 3208579  T
Q  293 tataccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttga 391  Q
    | |  |||||||||| | || ||||| ||||| |||||||||| | ||||||||||||||||||||||||||||| |||| |||||||| ||  || | |    
T  3208580 tttgtcaaataaatccttaccgttaagtttaaccccaaatgatat-tatggtggaccaaccttaagagtggtccaccataaatcctattaattattataa 3208678  T
Q  392 tttaaaccgtttgat 406  Q
    |||||||||||||||    
T  3208679 tttaaaccgtttgat 3208693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 194 - 364
Target Start/End: Original strand, 53622659 - 53622830
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||| |||||| | ||||||| | ||||||  | | |||||||||||| |||| ||||||||| |||| ||||| ||||| | ||||||||||||    
T  53622659 aggcttattagatccattcgtccctcgattaattttcattattcattttggtcgcacaattaataaaaaatatattttgatcccttagattttcctccgt 53622758  T
Q  294 ataccaaataaatcatgacggttaactttaa-cccaaatgatgtctatggtggaccaaccttaagagtggtc 364  Q
     | |||| ||||||   |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  53622759 ttgccaactaaatcccaacggttaagtttaaccccaaatgatgtctatggtggaccaaccttaagagtggtc 53622830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 193 - 351
Target Start/End: Complemental strand, 53624481 - 53624325
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||| ||  |||||||| ||||  |||| ||| |    
T  53624481 aaggcttatttgatccaatggtccctcaaataatttcaagttttcattttgatctcacaattaataaaacgtacattttggtcactcacttttttctcgg 53624382  T
Q  293 tataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaac 351  Q
    | | |||||||||||  ||||||||  |||||||| ||  |||| ||||||||||||||    
T  53624381 tttgccaaataaatccagacggttaggtttaaccccaa--atgtatatggtggaccaac 53624325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 194 - 373
Target Start/End: Original strand, 38240903 - 38241079
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||||| ||||||||  |||||||||||||||| ||||||||| |||| |||||||||| || ||||  |||| ||| ||||||||||||    
T  38240903 aggcttatttgatccattggtcccttgaataatttcaaatttttattttggtcccacaattaataaaacgtacgtttaagtccttcagattttcctccgt 38241002  T
Q  294 ataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
     | |||||||||||  | | ||||| |||||| | ||  |||||||||||| ||||| ||||| | ||||||||| ||||    
T  38241003 ttgccaaataaatcccggctgttaagtttaactccaa--atgtctatggtgaaccaa-cttaaaaatggtccatcgtaga 38241079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 413
Target Start/End: Original strand, 26886298 - 26886488
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    |||||||| |||||||||||||||| ||| |||||||||    ||||||| |||||||  |||  ||| || | |||||||||||  ||| ||||| ||     
T  26886298 taatttcatattttcattttggtctaacaattaataaaaatggtgttttgatccctcacgtttgtctctgtttgccaaataaatcc-gactgttaatttc 26886396  T
Q  323 aacc-caaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||| |||||||||| || |||| ||||||||||||||||||||| |||| |||||||| ||  |||| |||||||||||||||| ||||||    
T  26886397 aacctcaaatgatgtttacggtgaaccaaccttaagagtggtccaccataaatcctattaattattttaatttaaaccgtttgatttttttt 26886488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 195 - 408
Target Start/End: Original strand, 34818084 - 34818295
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||| |||||||||   || ||||||||| |||||||||||||| |||| |||||||||| |||| |||||||||||| |||||||||| |     
T  34818084 ggcttatttgattcaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtatgatttggtccctcagattttcctccatt 34818183  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattt 394  Q
    | |||||||||||   |  ||||||||||||   ||  ||||||||||| || ||||||||| | || || |||||||| | |||| || || || ||||    
T  34818184 tgccaaataaatcccaatagttaactttaactttaa--atgtctatggttgatcaaccttaaaaatgatctatcatagaccttattaattttgttaattt 34818281  T
Q  395 aaaccgtttgatct 408  Q
     ||||||| |||||    
T  34818282 taaccgttcgatct 34818295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 196 - 380
Target Start/End: Complemental strand, 34819401 - 34819218
Alignment:
Q  196 gcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtat 295  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||||| ||  ||| |||||||||| || ||||  |||| |||  ||||| || || |    
T  34819401 gcttatttgatccattagtccctcaaataatttcaagttttcattttgatcctacaattaataaaacgtacgtttaagtccttcactttttc-tctgttt 34819303  T
Q  296 accaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
     |||||||   | || | ||||| |||||||| ||||||||||||| ||||| ||||||||||||||||||| |||||||||||||    
T  34819302 gccaaatagtccttg-ctgttaagtttaaccccaaatgatgtctatagtggatcaaccttaagagtggtccaccatagatcctatt 34819218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 50810953 - 50810840
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||| | |||||| |||||||| |||||||||||| |||||||||||||| || | ||||||||||| | ||||| ||||||||| |||||||||||    
T  50810953 aggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgt 50810854  T
Q  294 ataccaaataaatc 307  Q
     | |||||||||||    
T  50810853 ttgccaaataaatc 50810840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 50864911 - 50865024
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||| | |||||| |||||||| |||||||||||| |||||||||||||| || | ||||||||||| | ||||| ||||||||| |||||||||||    
T  50864911 aggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgt 50865010  T
Q  294 ataccaaataaatc 307  Q
     | |||||||||||    
T  50865011 ttgccaaataaatc 50865024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 310 - 422
Target Start/End: Original strand, 35371020 - 35371132
Alignment:
Q  310 gacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctt 409  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||  |||| |||| |||  |||||| ||    
T  35371020 gacggttaagtttagcccaaatgatgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattttaactttttgatttt 35371119  T
Q  410 ttttattaaaaga 422  Q
    |||| | ||||||    
T  35371120 ttttttaaaaaga 35371132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 223 - 380
Target Start/End: Complemental strand, 3455715 - 3455558
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||| ||||||||||||||||| |  |||||||||  |||||||||||| |||| |||  ||||||    |||||||||| |||| |||||||||    
T  3455715 taatttcaagttttcattttggtctcataactaataaaactcatgttttggtccttcatgtttgtctccgtcagtcaaataaatcctgacagttaacttt 3455616  T
Q  323 aa---cccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
    ||   ||||||  |||| ||||||||||||||||||||||||||||| |||||||| ||||    
T  3455615 aaccccccaaa--atgt-tatggtggaccaaccttaagagtggtccaccatagatcatatt 3455558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 223 - 413
Target Start/End: Complemental strand, 41264743 - 41264553
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||||||||||||||||||||||||||||     |||||| |||||||  |||| |||||| | |||||||||||   || ||||| |||    
T  41264743 taatttcatgttttcattttggtctcacatttaataaaaatggcgttttgatccctcacctttttctccgtttgccaaataaatctcaaccgttaagttt 41264644  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    ||   ||||||||| ||||||||| || | ||||||||||| || ||||||||||||| ||  |||| ||||  |||||||||| ||||||    
T  41264643 aataaaaatgatgtttatggtggatcatctttaagagtggtacaccatagatcctattaattattttaatttcgaccgtttgatttttttt 41264553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 193 - 309
Target Start/End: Complemental strand, 36176627 - 36176510
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctca-tattttcctcc 291  Q
    |||||||||||||||||||||||||   | ||||||||  |||||||||||||| |||| |||||||||  ||||||||||||||||| | ||||||||     
T  36176627 aaggcttatttgatccaatggtcccctgattaatttcatgttttcattttggtcccacaattaataaaatgtatgttttggtccctcatttttttcctct 36176528  T
Q  292 gtataccaaataaatcat 309  Q
    || | |||||||||||||    
T  36176527 gtttgccaaataaatcat 36176510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 220 - 423
Target Start/End: Original strand, 42684899 - 42685101
Alignment:
Q  220 aaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcat-gacggttaa 318  Q
    ||||||||| || |||||||||||||  || | | ||||||||  | ||||| ||||||||| |||| ||  || ||||||||||||| | ||| |||||    
T  42684899 aaataattttaagttttcattttggttccataatgaataaaactgacgttttagtccctcatttttttctatgtttaccaaataaatccttgactgttaa 42684998  T
Q  319 ctttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaa 418  Q
     |||||||| ||  |||||||||||| ||||| ||||||||||||||| |||| | | |||| |  ||||| |||||||||||||||||| |||| | ||    
T  42684999 gtttaaccccaa--atgtctatggtgaaccaagcttaagagtggtccaccataaaccttattaaattttttaatttaaaccgtttgatctgttttttaaa 42685096  T
Q  419 aagat 423  Q
    |||||    
T  42685097 aagat 42685101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 188 - 307
Target Start/End: Original strand, 37735297 - 37735416
Alignment:
Q  188 attttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttc 287  Q
    ||||| |||||||||||||||| |||||| | ||||||||| || |||||||||||||| || | |||||||||| |||||||| ||||||||| ||||     
T  37735297 atttttaggcttatttgatccattggtcctttaaataattttaagttttcattttggtcccataattaataaaacgtatgttttagtccctcattttttt 37735396  T
Q  288 ctccgtataccaaataaatc 307  Q
    || ||| |  ||||||||||    
T  37735397 cttcgtttgtcaaataaatc 37735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 193 - 307
Target Start/End: Original strand, 53187555 - 53187668
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    ||||||||||||||| |||||||||  |||||||||||| ||||||||||| ||| ||| |||||||||  |||| ||||||||||||  ||||| ||||    
T  53187555 aaggcttatttgatcgaatggtcccctaaataatttcaagttttcattttgatcttacaattaataaaatgtatg-tttggtccctcactttttcttccg 53187653  T
Q  293 tataccaaataaatc 307  Q
    | | |||||||||||    
T  53187654 tttgccaaataaatc 53187668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 3210050 - 3209981
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaaca 263  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||| |||||||||||    
T  3210050 aggcttatttgattcaatggtcccttaaataattttaaattttcattttggtcccacaattaataaaaca 3209981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 305
Target Start/End: Complemental strand, 37736202 - 37736089
Alignment:
Q  192 taaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctcc 291  Q
    |||||||||| |||| || | |||||| |||||||||||  ||||||||||||||||||| |||||||||| || ||||| ||||||||  |||| ||||    
T  37736202 taaggcttatgtgattcattagtcccttaaataatttcatgttttcattttggtctcacaattaataaaacgtacgttttagtccctcacttttttctcc 37736103  T
Q  292 gtataccaaataaa 305  Q
    || | |||||||||    
T  37736102 gtttgccaaataaa 37736089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 50809418 - 50809531
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||| | |||| | |||||||| |||||||||||| |||||||||||||| || | ||||||||||| | ||||| ||||||||  |||||||||||    
T  50809418 aggcttaatagatctattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgt 50809517  T
Q  294 ataccaaataaatc 307  Q
     | |||||||||||    
T  50809518 ttgccaaataaatc 50809531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 50866444 - 50866331
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||| | |||| | |||||||| |||||||||||| |||||||||||||| || | ||||||||||| | ||||| ||||||||  |||||||||||    
T  50866444 aggcttaatagatctattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgt 50866345  T
Q  294 ataccaaataaatc 307  Q
     | |||||||||||    
T  50866344 ttgccaaataaatc 50866331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 191 - 378
Target Start/End: Complemental strand, 53614395 - 53614208
Alignment:
Q  191 ttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctc 290  Q
    |||||||||||| ||||   |||||||| |  |||||||   |||| ||||||||| |||| ||||||||||    ||||| |||||||| |||||||||    
T  53614395 ttaaggcttattagatcgtttggtcccttatttaatttcttgtttttattttggtcccacaattaataaaactggcgttttagtccctcacattttcctc 53614296  T
Q  291 cgtataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatccta 378  Q
      | | |||||||||||  | || |||| |||||||| |||| |||||||||||||| || |||||||||||||||| |||||||||||    
T  53614295 tatttgccaaataaatccaggcg-ttaagtttaaccccaaataatgtctatggtggatcatccttaagagtggtccaccatagatccta 53614208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 194 - 347
Target Start/End: Complemental strand, 53194989 - 53194837
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||| || ||||| || ||  ||||||||||| |||||||||||||| || | |||||||||| || ||||||||||||||  ||||||||  |    
T  53194989 aggcttatttaattcaatgatctcttgaataatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctat 53194890  T
Q  294 ataccaaataaat-catgacggttaactttaacccaaatgatgtctatggtggac 347  Q
     | |||||||||| |||| | ||||| |||||| ||||  |||||||||||||||    
T  53194889 ttgccaaataaatccatgtctgttaagtttaactcaaa--atgtctatggtggac 53194837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 195 - 408
Target Start/End: Original strand, 53420317 - 53420527
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||||||||||   |||||||  || |||||||| |||||||||||||||  ||| |||||||||| || ||||||||||||||  |||| ||||||     
T  53420317 ggcttatttgatc---tggtcccctaactaatttcatattttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttttctccgtt 53420413  T
Q  295 taccaaataaat--catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
    || |||||||||  |  | |  |||| |||||||  ||  ||||||||||||||||||| |||| |||| |||| |||||| | |||| |  ||||| ||    
T  53420414 tatcaaataaatccctagtctattaagtttaaccacaa--atgtctatggtggaccaactttaaaagtgatccaccatagaccttattaaactttttaat 53420511  T
Q  393 ttaaaccgtttgatct 408  Q
    |||||| |||||||||    
T  53420512 ttaaactgtttgatct 53420527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 198 - 307
Target Start/End: Complemental strand, 18458772 - 18458663
Alignment:
Q  198 ttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtatac 297  Q
    |||||||||||| | |||||  |||||||||||| |||| ||||||||| |||| |||||||||| |  ||||| ||||||||  ||||||||||| | |    
T  18458772 ttatttgatccattagtcccctaaataatttcaagtttttattttggtcccacaattaataaaacttgcgttttagtccctcactttttcctccgtttgc 18458673  T
Q  298 caaataaatc 307  Q
    ||||||||||    
T  18458672 caaataaatc 18458663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 336 - 419
Target Start/End: Original strand, 10301072 - 10301155
Alignment:
Q  336 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaa 419  Q
    ||||||||| |||||||||||||||| |||| ||||||||||||| ||  |||| |||||||| ||||||| |||||| |||||    
T  10301072 tctatggtgaaccaaccttaagagtgatccaccatagatcctattaattattttaatttaaactgtttgatttttttttttaaa 10301155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 408
Target Start/End: Complemental strand, 14745205 - 14745106
Alignment:
Q  307 catgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    |||||| || ||||||||||| ||  || ||| |||||||||||||||||||||||| || ||||||||||||| ||  |||| |||||||| |||||||    
T  14745205 catgaccgtcaactttaaccccaa--atatctgtggtggaccaaccttaagagtggttcaccatagatcctattaattattttaatttaaactgtttgat 14745108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 233 - 444
Target Start/End: Complemental strand, 28909685 - 28909477
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatca-tgacggttaactttaacccaaat 331  Q
    |||||||||||||| || |  |||||||||  ||||||||||||||||  |||  ||||||    ||||||||||  ||||  |||| |||||||| ||     
T  28909685 ttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgttggtcaaataaatctctgac--ttaagtttaaccccaa- 28909589  T
Q  332 gatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgtta 431  Q
     || ||| ||||| ||||  ||||||  ||||||| ||||||||||||| || ||||| |||||||| | |||||||||||||||||||||  |  ||||    
T  28909588 -atatctgtggtgaaccactcttaaggttggtccaccatagatcctattaatttttttaatttaaactggttgatcttttttattaaaagaggacggtta 28909490  T
Q  432 gatcatgaatgtc 444  Q
    ||||||| |||||    
T  28909489 gatcatgcatgtc 28909477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 378
Target Start/End: Complemental strand, 27841710 - 27841645
Alignment:
Q  313 ggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatccta 378  Q
    |||||| ||||| | |||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  27841710 ggttaagtttaatctaaattatgtttatggtggaccaaccttaagagtggtccaccatagatccta 27841645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 40364316 - 40364429
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    |||||||||||||| |||||| ||  |||||||||||| ||||||||||||||  | | |||||||||  || ||||  ||||||||| |||| ||||||    
T  40364316 aggcttatttgatctaatggttccctaaataatttcaagttttcattttggtcctaaaattaataaaatgtacgtttaagtccctcatttttttctccgt 40364415  T
Q  294 ataccaaataaatc 307  Q
     | |||||||||||    
T  40364416 ttgccaaataaatc 40364429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 472
Target Start/End: Original strand, 48083343 - 48083501
Alignment:
Q  312 cggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttt 411  Q
    |||||||||||||||  ||  |||||||||||| || |||||||||||||||| | ||||||||||||| ||  |||| ||||||||| || ||||| |     
T  48083343 cggttaactttaaccacaa--atgtctatggtgcactaaccttaagagtggtctaccatagatcctattaattattttaatttaaaccattcgatctata 48083440  T
Q  412 ttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaacaaca 472  Q
    || | ||| ||  | |||| ||||||||| |||| |||||||||   ||||||||| ||||    
T  48083441 ttttaaaatgaggactgttggatcatgaaggtccattgtatcttattgtgagtcaaaaaca 48083501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 360 - 472
Target Start/End: Complemental strand, 3807945 - 3807834
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  |||||||||||| || ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| |||||| ||||||||| | |    
T  3807945 tggtccactatagatcctatt-atttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccattgtatcttactg 3807847  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  3807846 tgaaccaacaaca 3807834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 200 - 290
Target Start/End: Original strand, 18442255 - 18442345
Alignment:
Q  200 atttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctc 290  Q
    |||||||||| ||||||   |||||||||||| |||||||||||||| |||| ||||||||||  | ||||| |||| |||| ||||||||    
T  18442255 atttgatccattggtcctctaaataatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc 18442345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 200 - 290
Target Start/End: Original strand, 19487329 - 19487419
Alignment:
Q  200 atttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctc 290  Q
    |||||||||| ||||||   |||||||||||| |||||||||||||| |||| ||||||||||  | ||||| |||| |||| ||||||||    
T  19487329 atttgatccattggtcctctaaataatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc 19487419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 24403232 - 24403322
Alignment:
Q  190 tttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctca 280  Q
    ||||||||||||||| || | ||||||   || ||||||||| |||||||| |||||||| | |||||||||  |||||||||||||||||    
T  24403232 tttaaggcttatttggtctattggtccactaattaatttcaagttttcattatggtctcataattaataaaatttatgttttggtccctca 24403322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 324
Target Start/End: Complemental strand, 40745557 - 40745455
Alignment:
Q  222 ataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactt 321  Q
    ||||||| || ||||||||||||||||||| || ||||||| |  |||||| ||||||| ||||||||  || | | ||||||||| |||| ||||||||    
T  40745557 ataattttaagttttcattttggtctcacaattgataaaactttcgttttgatccctcagattttcctttgtttgcaaaataaatcttgaccgttaactt 40745458  T
Q  322 taa 324  Q
    |||    
T  40745457 taa 40745455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 413
Target Start/End: Original strand, 10338872 - 10338953
Alignment:
Q  332 gatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||  || ||||||||||||||||||||| ||||||||||||| ||  |||| |||| ||| ||||||| ||||||    
T  10338872 gatgtctataatgaaccaaccttaagagtggtccaccatagatcctattaattattttaattttaactgtttgatttttttt 10338953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 421
Target Start/End: Original strand, 7270458 - 7270546
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaag 421  Q
    |||||| | ||||||||||||||||||||||| | |||||||| |||| |  ||||||| || ||| |||||||||||| | |||||||    
T  7270458 atgtctgtagtggaccaaccttaagagtggtctaccatagatcttattaacttttttgactttaactgtttgatcttttgttttaaaag 7270546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 472
Target Start/End: Original strand, 44175728 - 44175840
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  44175728 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 44175827  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  44175828 tgaaccaacaaca 44175840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 23443572 - 23443461
Alignment:
Q  198 ttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtatac 297  Q
    ||||||||||||||| ||||| || |||||| || |||||||||||||| || | |||||||||| ||  |||  |||| |||| ||||| || || | |    
T  23443572 ttatttgatccaatgatcccttaattaattttaacttttcattttggtcccaaaattaataaaacgtacctttaagtccttcatcttttcttctgtttgc 23443473  T
Q  298 caaataaatcat 309  Q
    ||||||||||||    
T  23443472 caaataaatcat 23443461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 455
Target Start/End: Original strand, 33705349 - 33705444
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatctt 455  Q
    |||||||  ||||||||||||  ||||||| || ||||||||||||||||||||| ||||  |  ||| |||||||||| ||||||  ||||||||    
T  33705349 tggtccactatagatcctattattatttttaatataaaccgtttgatcttttttaataaagaaagattattagatcatgcatgtccactgtatctt 33705444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 12105287 - 12105353
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaa 260  Q
    |||||||||| || ||||||| |||||||||||||||| ||||||| |||| | |||| ||||||||    
T  12105287 aggcttatttaattcaatggttcctcaaataatttcaagttttcatattggccccacaattaataaa 12105353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 19988474 - 19988429
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  19988474 ttcggcagttaactgccgagg-ggcatttgagtaatttactcgtgtg 19988429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 445
Target Start/End: Original strand, 36175306 - 36175509
Alignment:
Q  240 tttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtcta 339  Q
    |||||| ||| | ||||| |||| || |||||||| |||||| |||| |||||| | |||||||||||  ||| ||||| |||||||| ||  |||||||    
T  36175306 tttggtgtcataattaatgaaacgtacgttttggtgcctcatttttttctccgtttgccaaataaatccggactgttaagtttaaccccaa--atgtcta 36175403  T
Q  340 tggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatga 439  Q
    || |||| |||| |||    | ||||| |||| |||||||| || | ||| ||||||||| || ||| ||||||   ||||||| | |||| ||||||||    
T  36175404 tgatggatcaacattatatatagtccaccatatatcctattaatttctttaatttaaaccattcgatttttttttaaaaaagatgagtgttggatcatga 36175503  T
Q  440 atgtcc 445  Q
    | ||||    
T  36175504 aggtcc 36175509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 50998738 - 50998783
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  50998738 ttcggcagttaactgccgagg-ggcatttgagtaatttactcgtgtg 50998783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 339 - 380
Target Start/End: Complemental strand, 11224817 - 11224776
Alignment:
Q  339 atggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  11224817 atggtggaccaaccttaagagtggtccaccatagatcatatt 11224776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 18745989 - 18745948
Alignment:
Q  43 aagtgccgatggattaaattgaatttcggcagttaactgccg 84  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  18745989 aagtgctgatggatgaaattgaatttcggcagttaactgccg 18745948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 373
Target Start/End: Complemental strand, 26887595 - 26887497
Alignment:
Q  273 gtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatag 372  Q
    ||||||||| |||||||| || | ||||||||||  |||||||||||||||||   ||  || ||||||||| ||||||||||| ||||||| ||| |||    
T  26887595 gtccctcatcttttcctctgtttcccaaataaattctgacggttaactttaacttcaa--atatctatggtgtaccaaccttaaaagtggtctatcgtag 26887498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 40871216 - 40871179
Alignment:
Q  46 tgccgatggattaaattgaatttcggcagttaactgcc 83  Q
    |||||||||||| |||||||||||||||||||||||||    
T  40871216 tgccgatggatttaattgaatttcggcagttaactgcc 40871179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 8796406 - 8796354
Alignment:
Q  220 aaataatttcaaattttcattttggtctcacatttaataaaacatatgttttg 272  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||  ||||||||    
T  8796406 aaataatttcaaatttttattttagtctcacaattaataaaactcatgttttg 8796354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 371
Target Start/End: Original strand, 10730956 - 10731057
Alignment:
Q  268 ttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccat 367  Q
    ||||||||| |||  |||| |||||| | |||||||||||  ||| ||||||||||||   ||  |||||||||||| ||||||||||| ||||||| ||    
T  10730956 ttttggtccttcacttttttctccgtttgccaaataaatcccgactgttaactttaacttcaa--atgtctatggtgaaccaaccttaaaagtggtctat 10731053  T
Q  368 cata 371  Q
    ||||    
T  10731054 cata 10731057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 373
Target Start/End: Complemental strand, 35372248 - 35372101
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  ||||||||||||||||||| |||||||||     ||||| ||||||||  |||||||| || | ||||||||||| | || ||||||||     
T  35372248 taatttcatgttttcattttggtctcacaattaataaaaatggcgttttagtccctcaccttttcctctgtttgccaaataaatccttactgttaactta 35372149  T
Q  323 aacccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    |   |||   ||||||||| ||||||||  |||| ||||||||||| ||||    
T  35372148 acttcaa---atgtctatgttggaccaattttaaaagtggtccatcgtaga 35372101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 413
Target Start/End: Original strand, 49379837 - 49379917
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||||| || |||| | ||||||| ||||||||||||| ||  || | |||||||| ||||||| ||||||    
T  49379837 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaactgtttgatatttttt 49379917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 4330807 - 4330769
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttac 106  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  4330807 ttcggcagttaactgccgagga-gcatttgagtaatttac 4330769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 7942060 - 7942102
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttact 107  Q
    ||||||||||||||||||||||||| | ||||||||||||||||    
T  7942060 aatttcggcagttaactgccgagga-gtatttgagtaatttact 7942102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 455
Target Start/End: Complemental strand, 37981627 - 37981533
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatctt 455  Q
    |||||||  |||||||||||| || ||||| || |||||||||||||| |||||| ||||  |  |||||||||||||| ||||||  ||||||||    
T  37981627 tggtccactatagatcctatt-atttttttaatataaaccgtttgatcctttttaataaagaaggattgttagatcatgcatgtccactgtatctt 37981533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 307
Target Start/End: Complemental strand, 53421882 - 53421767
Alignment:
Q  192 taaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctcc 291  Q
    ||||||||||||||| |||| || ||  || |||||| |  |||||||||| |||  ||| |||||||||| || ||||||||||||||  |||| |||     
T  53421882 taaggcttatttgattcaattgttccctaattaattttacgttttcattttagtcctacaattaataaaacgtacgttttggtccctcacttttttctct 53421783  T
Q  292 gtataccaaataaatc 307  Q
    || | |||||||||||    
T  53421782 gtttgccaaataaatc 53421767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 10340074 - 10340028
Alignment:
Q  208 caatggtccctcaaataatttcaaattttcattttggtctcacattt 254  Q
    |||||||||||||| ||||||| | ||||||||||||||||| ||||    
T  10340074 caatggtccctcaactaatttccatttttcattttggtctcatattt 10340028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 11095142 - 11095187
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||||    
T  11095142 ttcggcagctaactgccgagg-ggcatttgagtaatttactcgtgtg 11095187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 16851141 - 16851096
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  16851141 ttcggcagttaactgccgagg-ggcatttgagtaaattactcgtgtg 16851096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 26245350 - 26245305
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||    
T  26245350 ttcggcagttaactgccgagg-ggtatttgagtaatttactcgtgtg 26245305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 24703473 - 24703517
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  24703473 ttcggtagttaactgccgagg-ggcatttgagtaatttactcgtgt 24703517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 307
Target Start/End: Original strand, 41544663 - 41544772
Alignment:
Q  198 ttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtatac 297  Q
    ||||| ||| || |||||| | |||||||||||| ||||||||||||||  | | |||||| ||| || ||||  ||||||||  |||||||| || | |    
T  41544663 ttattagattcattggtccattaaataatttcaagttttcattttggtcctataattaatataacgtacgtttaagtccctcactttttcctctgtttgc 41544762  T
Q  298 caaataaatc 307  Q
    ||||||||||    
T  41544763 caaataaatc 41544772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 44182426 - 44182511
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtcc 445  Q
    |||||||  ||||||||||||  | ||||| || ||||| ||||||||||||||| ||||  |  |||||||||||||| ||||||    
T  44182426 tggtccactatagatcctattattttttttaatataaactgtttgatcttttttaataaagaaggattgttagatcatgcatgtcc 44182511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 413
Target Start/End: Complemental strand, 53194590 - 53194513
Alignment:
Q  336 tctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||| ||| || ||||| |||| |||| ||||||| ||||| ||  ||||  ||||||||||||||||||||||    
T  53194590 tctatggtagacaaatcttaaaagtgatccaccatagattctattaattattttattttaaaccgtttgatctttttt 53194513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 4274102 - 4274063
Alignment:
Q  66 tttcggcagttaactgccgaggaggcatttgagtaatttac 106  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  4274102 tttcggcagttaactgccgagg-ggcatttgaataatttac 4274063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 9429908 - 9429952
Alignment:
Q  68 tcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||||| || ||||| |||||||||| ||||    
T  9429908 tcggcagttaactgccgagggggtatttgcgtaatttacttgtgt 9429952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 333 - 413
Target Start/End: Original strand, 13621055 - 13621135
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||||| || | || | ||||||| ||||||||||||| ||  || | ||||||||||||| || ||||||    
T  13621055 atgtctatggtggaccgacttaaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttaatttttttt 13621135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 19842522 - 19842475
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||||||| | ||||||||| ||||||||| ||||    
T  19842522 aatttcggcagttaactgccgaag-ggcatttgaataatttacttgtgt 19842475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 34543194 - 34543233
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttact 107  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  34543194 ttcggcagttaactgccgagg-gacatttgagtaatttact 34543233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 34712245 - 34712209
Alignment:
Q  70 ggcagttaactgccgaggaggcatttgagtaatttac 106  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  34712245 ggcagctaactgccgagggggcatttgagtaatttac 34712209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 50330630 - 50330583
Alignment:
Q  64 aatttcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    ||||||| || |||||||||||| |||||||||||||||||||| ||||    
T  50330630 aatttcgacaattaactgccgag-aggcatttgagtaatttactcgtgt 50330583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 196 - 280
Target Start/End: Complemental strand, 55328422 - 55328338
Alignment:
Q  196 gcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctca 280  Q
    |||||||||||||| | ||| |  || ||||||||| ||||||||||| ||||| | |||||||||   ||||||| ||||||||    
T  55328422 gcttatttgatccattagtctcctaattaatttcaagttttcattttgatctcataattaataaaattcatgttttagtccctca 55328338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 101; Significance: 9e-50; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 211 - 414
Target Start/End: Complemental strand, 43677 - 43473
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatg 310  Q
    |||||||||||||||||| || |||| ||||||||| || | |||||||||| |||||||  ||||||||  ||||||||||| | |||||||| || ||    
T  43677 tggtccctcaaataattttaagtttttattttggtcccataattaataaaacgtatgtttaagtccctcactttttcctccgtttgccaaataagtcctg 43578  T
Q  311 acggttaactttaacccaaa-tgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctt 409  Q
    |||||||| |||||||| || |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||  |||| |||||||||||||||| ||    
T  43577 acggttaagtttaaccccaagtgatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgatttt 43478  T
Q  410 tttta 414  Q
    |||||    
T  43477 tttta 43473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 5e-36; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 195 - 412
Target Start/End: Complemental strand, 7311842 - 7311626
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    ||||||||| || ||||||||||| ||||||||| || ||||||||||| || |||| |||||||| | ||  ||||||||||| |  ||||  ||  |     
T  7311842 ggcttatttaattcaatggtcccttaaataattttaagttttcattttgatcccacaattaataaa-cgtaccttttggtcccttacttttttatctatt 7311744  T
Q  295 taccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgattt 394  Q
    | ||||||||||| | || ||||| ||||| ||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||  |||| ||||    
T  7311743 tgccaaataaatcctcacagttaagtttaatccaaatgatgtctatggtgaaccaaccttaagagtggtccaccataaatcctattaattattttaattt 7311644  T
Q  395 aaaccgtttgatcttttt 412  Q
    |||||||||||| |||||    
T  7311643 aaaccgtttgattttttt 7311626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 194 - 413
Target Start/End: Complemental strand, 29381849 - 29381630
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||| ||||   |||||||| |  |||||||  |||||||||||| || |||| |||||||||   | ||||| |||| |||| |||||||||||    
T  29381849 aggcttattagatcgtttggtcccttatttaatttcttattttcattttgatcccacaattaataaaaatgacgttttagtccttcatcttttcctccgt 29381750  T
Q  294 ataccaaataaatcatgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgat 392  Q
     |||||||||||||   || ||||| |||||||| ||||||||||| |||||||| ||||||||||||| |||| ||||||||||||| ||  |||| ||    
T  29381749 ttaccaaataaatcca-acagttaagtttaaccccaaatgatgtctgtggtggacaaaccttaagagtgatccaccatagatcctattaattattttaat 29381651  T
Q  393 ttaaaccgtttgatctttttt 413  Q
    || ||||||||||| ||||||    
T  29381650 ttcaaccgtttgatttttttt 29381630  T

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Target: chr6; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 233 - 406
Target Start/End: Original strand, 17837652 - 17837825
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaat 331  Q
    |||||||||||||  |||| |||||||||     ||||| ||||||||| ||||| ||||| |||||||||||||   || ||||| |||||||| ||||    
T  17837652 ttttcattttggttccacaattaataaaaatggcgttttagtccctcatcttttcttccgtttaccaaataaatcca-acagttaagtttaaccccaaat 17837750  T
Q  332 gatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||||||| ||  |||| |||| |||||||||||    
T  17837751 gatgtctatggtggacaaacattaagagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 17837825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 193 - 371
Target Start/End: Complemental strand, 6452631 - 6452453
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    ||||||||||||||||| |||||||  |||||||||||| |||||||||||||| || | |||||||||| || ||||  ||||||||| ||||||||||    
T  6452631 aaggcttatttgatccattggtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgtttgagtccctcattttttcctccg 6452532  T
Q  293 tataccaaataaat-catgacggtt-aactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcata 371  Q
    | | |||||||||| | |||| ||| || |||||||||||  || ||||| ||| | |||| |||||||||||||| ||||    
T  6452531 tttgccaaataaatccttgaccgttaaagtttaacccaaa--atatctatagtgtatcaactttaagagtggtccaccata 6452453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 191 - 293
Target Start/End: Original strand, 34023880 - 34023982
Alignment:
Q  191 ttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctc 290  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||||||||||  |||| |||||||||| ||  |||||||||||||  ||||||||    
T  34023880 ttaaggcttatttgatcaaatggtccctcaaataattttaagttttcattttggtaccacaattaataaaacgtaccttttggtccctcaccttttcctc 34023979  T
Q  291 cgt 293  Q
    |||    
T  34023980 cgt 34023982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 193 - 413
Target Start/End: Complemental strand, 18346870 - 18346650
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||||||||| ||||   |||||||| |  |||||||| ||||||||||||||| |||| |||||||||     |||||| |||||||  |||  ||| |    
T  18346870 aaggcttattagatcatttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggcgttttgatccctcacgtttgtctctg 18346771  T
Q  293 tataccaaataaatcatgacggttaactttaacc-caaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttga 391  Q
    | | |||||||||||  ||| ||||| ||||||| |||||||||| || |||| |||||||||||||||||||||  ||| |||||||| ||  |||| |    
T  18346770 tttgccaaataaatcc-gactgttaattttaacctcaaatgatgtttacggtgaaccaaccttaagagtggtccactataaatcctattaattattttaa 18346672  T
Q  392 tttaaaccgtttgatctttttt 413  Q
    ||||||||||||||| ||||||    
T  18346671 tttaaaccgtttgatttttttt 18346650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 297 - 380
Target Start/End: Complemental strand, 5187638 - 5187555
Alignment:
Q  297 ccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctatt 380  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||| |||||| || |||||||||||||    
T  5187638 ccaaataaatcctgacggttaagtttaacccaaatgttgtctatagtggaccaaccttaaaagtggttcaccatagatcctatt 5187555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 220 - 413
Target Start/End: Original strand, 12669746 - 12669938
Alignment:
Q  220 aaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatca-tgacggttaa 318  Q
    ||||||| | ||||||| |||||||||||||| ||||||||||  | ||||| |||| |||  ||||||||||| | | |||||||||  | || |||||    
T  12669746 aaataatattaaatttttattttggtctcacaattaataaaactcaagttttagtccgtcactttttcctccgtttgctaaataaatctctaactgttaa 12669845  T
Q  319 ctttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    ||||||||  ||  |||| ||||||||||||||||||||||||||||| |||||||| ||||  | || || || |||||  |||||||||||||    
T  12669846 ctttaacctcaa--atgtgtatggtggaccaaccttaagagtggtccaccatagatcatattatttttattaatataaactatttgatctttttt 12669938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 233 - 425
Target Start/End: Original strand, 23392250 - 23392443
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaaccc-aaat 331  Q
    |||||||||||||| |||| |||||||||     ||||  ||||||||  ||||||||||| | ||||||||||| | |  ||||| |||||||| ||||    
T  23392250 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 23392349  T
Q  332 gatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat-cttttttattaaaagataa 425  Q
    |||| ||| |||||| ||||||||| ||||||||| ||||||||||||| ||  |||| |||| |||||||||||  |||||| |||||||||||    
T  23392350 gatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatattttttttttaaaagataa 23392443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 196 - 368
Target Start/End: Original strand, 7310275 - 7310445
Alignment:
Q  196 gcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtat 295  Q
    ||||||||||||||  ||||| | ||||||||| || |||||||||||||| || | |||||||||| |||||||  |||| |||  |||| |||||| |    
T  7310275 gcttatttgatccatcggtcctttaaataattttaagttttcattttggtcccataattaataaaacgtatgtttaagtccttcaggtttttctccgttt 7310374  T
Q  296 accaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatc 368  Q
    ||||||||||||  | | ||||| |||||| | ||  |||||||||||| ||||||||||| | |||||||||    
T  7310375 accaaataaatctcggctgttaagtttaactccaa--atgtctatggtgaaccaaccttaaaaatggtccatc 7310445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 193 - 293
Target Start/End: Complemental strand, 34024183 - 34024084
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||| |||||||||  ||  ||||| |||||||  ||||||||||    
T  34024183 aaggcttatttgatccaatgattc-tcaaataatttcaaattttcattttggtcccacaattaataaaatgtacattttgatccctcactttttcctccg 34024085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 223 - 364
Target Start/End: Complemental strand, 32507116 - 32506976
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcat-gacggttaactt 321  Q
    ||||||||  ||||||||||| || ||||||||||||||    |||||| |||||||| ||||| ||| || | ||||||||||| | ||| ||||| ||    
T  32507116 taatttcatgttttcattttgatcccacatttaataaaaatggtgttttagtccctcacatttttctcagtttgccaaataaatccttgactgttaagtt 32507017  T
Q  322 taacccaaatgatgtctatggtggaccaaccttaagagtggtc 364  Q
    |||||| ||  || |||||||||||||||||||||||||||||    
T  32507016 taaccccaa--atatctatggtggaccaaccttaagagtggtc 32506976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 307
Target Start/End: Original strand, 232174 - 232284
Alignment:
Q  195 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgta 294  Q
    |||||| | |||||| |||||||| |||||||||||| |||||||||||||| || | ||||||||||  | ||||| ||||||||  |||||||||||     
T  232174 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaac--acgttttagtccctcactttttcctccgtt 232271  T
Q  295 taccaaataaatc 307  Q
    | |||||||||||    
T  232272 tgccaaataaatc 232284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 27080917 - 27080988
Alignment:
Q  190 tttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaa 261  Q
    ||||||| ||||||||||||||| ||||| |||||||||| | ||||||||||||||| ||| |||||||||    
T  27080917 tttaaggattatttgatccaatgatcccttaaataatttcgagttttcattttggtcttacaattaataaaa 27080988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 312
Target Start/End: Original strand, 6452280 - 6452399
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    ||||||||||| |||||  ||||||  |||||||||||| ||||| ||||||||  | | |||||||||  || ||||| ||||||||  ||||||||||    
T  6452280 aaggcttatttaatccatcggtcccctaaataatttcaagttttcgttttggtcctataattaataaaaggtacgttttagtccctcactttttcctccg 6452379  T
Q  293 tataccaaataaatcatgac 312  Q
    | | ||||||||||| ||||    
T  6452380 tttgccaaataaatcctgac 6452399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 193 - 306
Target Start/End: Complemental strand, 15730150 - 15730036
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaat-aaaacatatgttttggtccctcatattttcctcc 291  Q
    |||||||||| ||| || ||||||||||| ||||||| | |||||||||||||| |||| ||||| |||| |||  |||||||||||||  ||||| |||    
T  15730150 aaggcttattagattcattggtccctcaattaatttccatttttcattttggtcccacaattaataaaaaaatacattttggtccctcactttttcttcc 15730051  T
Q  292 gtataccaaataaat 306  Q
    || | | ||||||||    
T  15730050 gtttgctaaataaat 15730036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 233 - 366
Target Start/End: Complemental strand, 23397434 - 23397303
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaacccaaatg 332  Q
    |||||||||||||| |||| |||||||||     ||||| ||||||||  ||||||||||| | |||||||||||  ||| ||||| ||||||   ||      
T  23397434 ttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccgaccgttaaatttaacttcaa-- 23397337  T
Q  333 atgtctatggtggaccaaccttaagagtggtcca 366  Q
    |||||||||||||||||||||||| ||| |||||    
T  23397336 atgtctatggtggaccaaccttaaaagtagtcca 23397303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 406
Target Start/End: Original strand, 11967351 - 11967424
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    |||||||| ||||||||||||| |||| ||||||||||||||| |||| ||  |||| |||||||| |||||||    
T  11967351 atgtctattgtggaccaaccttgagaggggtccatcatagatcatattaattattttaatttaaactgtttgat 11967424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 197 - 289
Target Start/End: Complemental strand, 27082261 - 27082168
Alignment:
Q  197 cttatttgatccaatggtccctca-aataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcct 289  Q
    |||||| |||||||||||||| |  ||||||||| |||||||||||||||| |||| |||||||||  |||||||  ||||||||  |||||||    
T  27082261 cttattcgatccaatggtccccctgaataatttcgaattttcattttggtcccacaattaataaaaagtatgtttaagtccctcactttttcct 27082168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 6701406 - 6701490
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatc 307  Q
    |||||||| ||||||||||||||| |||| |||||||||    | |||| |||||||| |||||||||||| | |||||||||||    
T  6701406 taatttcatattttcattttggtcccacaattaataaaaatggtattttagtccctcacattttcctccgtttgccaaataaatc 6701490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 413
Target Start/End: Original strand, 11722921 - 11723001
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||||||||||||| || |||| | ||||||| ||||||||||||| ||  || | |||||||||||||||| ||||||    
T  11722921 atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgatttttttt 11723001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 27967165 - 27967097
Alignment:
Q  197 cttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacata 265  Q
    ||||||||||||||||||||| ||||||||| | | ||||||||||| || |||| |||||| ||||||    
T  27967165 cttatttgatccaatggtcccccaaataattcctagttttcattttgatcccacaattaatagaacata 27967097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 31146387 - 31146336
Alignment:
Q  68 tcggcagttaactgccgaggaggcatttgagtaatttactggtgtgtcttag 119  Q
    |||||||||||||||  ||| ||||||| |||||||||||||||||||||||    
T  31146387 tcggcagttaactgctaagggggcatttcagtaatttactggtgtgtcttag 31146336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 287
Target Start/End: Complemental strand, 233684 - 233590
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttc 287  Q
    |||||||| | |||| | |||||| | |||||||||||| |||||||||||||| || | ||||||||| | | ||||| ||||||||| |||||    
T  233684 aaggcttaatagatcaattggtcctttaaataatttcaatttttcattttggtcccataattaataaaaaacacgttttagtccctcattttttc 233590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 5186594 - 5186696
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||||  |||||||||||||| |||| |||||||||   | |||||  ||| |||| ||||||||||| | |||||||||||  ||| |||||||||    
T  5186594 taatttcatgttttcattttggtcacacaattaataaaagtgacgttttaatccatcatcttttcctccgtttgccaaataaatcccgaccgttaacttt 5186693  T
Q  323 aac 325  Q
    |||    
T  5186694 aac 5186696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 472
Target Start/End: Complemental strand, 13847866 - 13847764
Alignment:
Q  369 atagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccgtgagtcaac 468  Q
    |||||||||||| || ||||| || ||||||||||||||||||||| ||||  |  ||| |||||||||| ||||||  |||||||| | ||||  ||||    
T  13847866 atagatcctatt-atttttttaatataaaccgtttgatcttttttaataaagaaggatttttagatcatgcatgtccactgtatcttactgtgaaccaac 13847768  T
Q  469 aaca 472  Q
    ||||    
T  13847767 aaca 13847764  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 2109532 - 2109487
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||    
T  2109532 ttcggcagttaactgccga-gaggtatttgagtaatttactcgtgtg 2109487  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 13164315 - 13164360
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  13164315 ttcggtagttaactgccgagg-ggcatttgagtaatttactcgtgtg 13164360  T

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Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 25554720 - 25554675
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||    
T  25554720 ttcggcagttaactgccgagg-ggtatttgagtaatttactcgtgtg 25554675  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 1189112 - 1189149
Alignment:
Q  43 aagtgccgatggattaaattgaatttcggcagttaact 80  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  1189112 aagtcccgatggattaaattggatttcggcagttaact 1189149  T

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Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 32616735 - 32616698
Alignment:
Q  43 aagtgccgatggattaaattgaatttcggcagttaact 80  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  32616735 aagtgccgatggattaaattgaatttgagcagttaact 32616698  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 325
Target Start/End: Complemental strand, 17839219 - 17839127
Alignment:
Q  233 ttttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaactttaac 325  Q
    |||||||||||||| |||| |||||||||     ||||| ||||||||  ||||||||||| | |||||||||||  ||| ||||| ||||||    
T  17839219 ttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccgaccgttaattttaac 17839127  T

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Target: scaffold0011 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 223 - 413
Target Start/End: Original strand, 127459 - 127648
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatca-tgacggttaactt 321  Q
    ||||||||| ||||| |||||||| || |  |||||||||  ||||||||||||||||| ||| |||||||    ||||||||||  |||| ||||||||    
T  127459 taatttcaagttttcgttttggtcccataactaataaaactcatgttttggtccctcatgtttgcctccgtcggtcaaataaatccctgacagttaactt 127558  T
Q  322 taacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatctttttt 413  Q
    |||||  ||  |||||||||||| | ||||||||||||||||||| ||||||||||||| || ||||| |||||||||||| ||| ||||||    
T  127559 taacctcaa--atgtctatggtgaaacaaccttaagagtggtccaccatagatcctattaatgtttttaatttaaaccgttagatttttttt 127648  T

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Target: scaffold0013 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 297 - 413
Target Start/End: Original strand, 32671 - 32787
Alignment:
Q  297 ccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctat--tcatatttttgattt 394  Q
    ||||||||||| | || |||||||||||||  ||  ||||||||||||||||||||||| |||||||||||||||||||||||  |  | ||||| ||||    
T  32671 ccaaataaatcctaactgttaactttaaccttaa--atgtctatggtggaccaaccttaggagtggtccatcatagatcctattattttttttttaattt 32768  T
Q  395 aaaccgtttgatctttttt 413  Q
    |||||||||||||||||||    
T  32769 aaaccgtttgatctttttt 32787  T

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Target: scaffold1152 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 526 - 590
Target Start/End: Original strand, 1358 - 1422
Alignment:
Q  526 cttcatacaaactcatcaatcttcaaactcaacccaaaaaatccagcaaatcattaaaaaccaaa 590  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  1358 cttcatacaacctcatcaatcttcaaactcaacccagaaaatccagcaaatcattaaaaaacaaa 1422  T

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Target: scaffold1152; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 373
Target Start/End: Complemental strand, 2595 - 2417
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||||||||| |||| | ||||||||||| ||||||| | |||||||||||||| |||| |||||||||  ||  ||||||||||| |  |||||||| |    
T  2595 aaggcttattagatcaattggtccctcaattaatttcca-ttttcattttggtcccacaattaataaaaagtaccttttggtcccttagtttttcctctg 2497  T
Q  293 tataccaaataaatcatgacggttaactttaac-ccaaatgatgtctatggtggaccaaccttaagagtggtccatcataga 373  Q
    | | ||||||||||   ||| |||||||||||| |||||| ||||  |||||||||||||||||| ||||||| ||| ||||    
T  2496 ttttccaaataaattccgactgttaactttaactccaaat-atgt-aatggtggaccaaccttaaaagtggtctatcgtaga 2417  T

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Target: scaffold0078 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 193 - 307
Target Start/End: Original strand, 18808 - 18922
Alignment:
Q  193 aaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccg 292  Q
    |||| |||||||||||| || ||| | ||||||||| || |||||||||||||| || |||||||||||| |||||||| ||||||||  |||| |||||    
T  18808 aaggtttatttgatccattgatcctttaaataattttaagttttcattttggtcccatatttaataaaacttatgttttagtccctcactttttactccg 18907  T
Q  293 tataccaaataaatc 307  Q
    | | |||||||||||    
T  18908 tttgccaaataaatc 18922  T

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Target: scaffold0034 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 223 - 406
Target Start/End: Original strand, 108539 - 108722
Alignment:
Q  223 taatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatcatgacggttaacttt 322  Q
    ||||||| | ||| ||||||| || || | |||||||||| || |||||| |||||||| ||||||||| | | ||||||||||| |  | ||||| |||    
T  108539 taatttccattttacattttgatcccataattaataaaacgtacgttttgatccctcattttttcctccatttgccaaataaatccttgcagttaagttt 108638  T
Q  323 aaccc-aaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgat 406  Q
    ||||| |||| || | ||||||||||||||||||| ||||||||| ||||||| ||||| ||  || | ||||||||| ||||||    
T  108639 aaccccaaataatat-tatggtggaccaaccttaaaagtggtccaccatagatgctattaattattataatttaaaccttttgat 108722  T

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Target: scaffold0034; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 194 - 408
Target Start/End: Complemental strand, 109864 - 109652
Alignment:
Q  194 aggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgt 293  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||  ||| |||||||||| ||  |||| ||||||||  |||| |||  |    
T  109864 aggcttatttgattcaatggtcccttaaataatttcaagttttcattttggtcctacaattaataaaacgtacattttagtccctcacttttttctcaat 109765  T
Q  294 ataccaaataaatcatgacggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatt 393  Q
     | |||||| ||||   ||  |||||||||||   ||  |||| ||||||||||||||||||| | | ||||||| |||| | |||| || || || |||    
T  109764 ttgccaaatgaatcccaactattaactttaacttcaa--atgtatatggtggaccaaccttaaaaatagtccatcgtagaccttattaattttgttaatt 109667  T
Q  394 taaaccgtttgatct 408  Q
    | |||| ||||||||    
T  109666 ttaaccatttgatct 109652  T

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Target: scaffold0201 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 191 - 410
Target Start/End: Original strand, 21121 - 21339
Alignment:
Q  191 ttaaggcttatttgatccaatggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctc 290  Q
    |||||||||||| |||||| ||| ||||||| ||||||  | |||||||||| ||| || | |||||||||  ||  ||||| ||||| |  ||||||||    
T  21121 ttaaggcttattagatccattggcccctcaattaattttcatttttcattttagtcccataattaataaaaagtaccttttgatcccttagtttttcctc 21220  T
Q  291 cgtataccaaataaatcatgacg--gttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttt 388  Q
    ||| | |||||||||||||  ||  ||||| |||||||  ||  |||||||||||||||||||||| ||||||||||| ||||||    ||| || ||||    
T  21221 cgtttgccaaataaatcat-tcgttgttaagtttaaccacaa--atgtctatggtggaccaaccttcagagtggtccaccatagacttcattaatttttt 21317  T
Q  389 tgatttaaaccgtttgatcttt 410  Q
      |||| |||||||||||||||    
T  21318 aaattttaaccgtttgatcttt 21339  T

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Target: scaffold1251 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 351
Target Start/End: Complemental strand, 1187 - 1048
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaa-tcat 309  Q
    ||||||||||||||||||| | |||||||||||||| || |  |||||||||  |||||||||||||||| |||  |||||||    |||||||| ||||    
T  1187 tggtccctcaaataatttccagttttcattttggtcccataagtaataaaactcatgttttggtccctcaaattcacctccgtcagtcaaataaattcat 1088  T
Q  310 gacggttaactttaacccaaatgatgtctatggtggaccaac 351  Q
    |   |||||||||||||| ||  |||||||||||||||||||    
T  1087 gggtgttaactttaaccccaa--atgtctatggtggaccaac 1048  T

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Target: scaffold0219 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 422
Target Start/End: Complemental strand, 8171 - 8083
Alignment:
Q  333 atgtctatggtggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaaga 422  Q
    |||||||||||||| |||||||||||| ||||||||||||||  |||| ||  |||| ||||||||||||||||  ||||| ||||||||    
T  8171 atgtctatggtggatcaaccttaagag-ggtccatcatagattatattaattattttaatttaaaccgtttgattgttttttttaaaaga 8083  T

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Target: scaffold2071 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 343 - 423
Target Start/End: Complemental strand, 652 - 572
Alignment:
Q  343 tggaccaaccttaagagtggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagat 423  Q
    |||||||||||||||||||||||| |||||| | |||| |  ||||| |||||||||||||||||| |||| | |||||||    
T  652 tggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgatctgttttttaaaaagat 572  T

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Target: scaffold0035 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 472
Target Start/End: Complemental strand, 83175 - 83063
Alignment:
Q  360 tggtccatcatagatcctattcatatttttgatttaaaccgtttgatcttttttattaaaagataattgttagatcatgaatgtccgttgtatcttcccg 459  Q
    |||||||  ||||||||||||  | ||||| || ||||||||||||||||||||| ||||  |  |||||||||||||| ||||||  |||||||| | |    
T  83175 tggtccactatagatcctattattttttttaatataaaccgtttgatcttttttaataaagaaggattgttagatcatgcatgtccactgtatcttactg 83076  T
Q  460 tgagtcaacaaca 472  Q
    |||  ||||||||    
T  83075 tgaaccaacaaca 83063  T

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Target: scaffold0176 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 653 - 696
Alignment:
Q  68 tcggcagttaactgccgaggaggcatttgagtaatttactggtgt 112  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  653 tcggcagttaactgccgagg-ggcatttgagtaatttactcgtgt 696  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 307
Target Start/End: Original strand, 61865 - 61961
Alignment:
Q  211 tggtccctcaaataatttcaaattttcattttggtctcacatttaataaaacatatgttttggtccctcatattttcctccgtataccaaataaatc 307  Q
    |||||||  |||||||||||  ||||||||||||||||| | |||||||||     ||||| ||||||||| ||||| ||||| | |||||||||||    
T  61865 tggtcccctaaataatttcatgttttcattttggtctcataattaataaaaatggcgttttagtccctcatcttttcttccgtttgccaaataaatc 61961  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 69279 - 69324
Alignment:
Q  67 ttcggcagttaactgccgaggaggcatttgagtaatttactggtgtg 113  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||    
T  69279 ttcggcagttaactgccgagg-ggtatttgagtaatttactcgtgtg 69324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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